BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040604
(582 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 164/298 (55%), Gaps = 20/298 (6%)
Query: 283 KRYSYSDVKRMTKSFRDK--LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE--FINE 338
KR+S +++ + +F +K LG+GG+G+VYKG L DG LVAVK LK R G E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 339 VASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHN--DRNIKLEWKTMYQIA 396
V IS H N++ GFC + L+Y M NGS+ + + L+W +IA
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR 456
+G ARGL YLH C +I+H D+K NILLDE+F + DFGLAK K+ + R
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVR 204
Query: 457 GTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNL-------DDEVTDTSICHN 509
GTIG+IAPE S G S K+DV+ YG+M++E++ + DD+V
Sbjct: 205 GTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 510 LIYE-RIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGS 566
L+ E ++E D G +EE + +I V C Q++P ERP M +V+ MLEG
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEE---VEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 163/298 (54%), Gaps = 20/298 (6%)
Query: 283 KRYSYSDVKRMTKSFRDK--LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE--FINE 338
KR+S +++ + +F +K LG+GG+G+VYKG L DG LVAVK LK R G E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 339 VASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHN--DRNIKLEWKTMYQIA 396
V IS H N++ GFC + L+Y M NGS+ + + L+W +IA
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR 456
+G ARGL YLH C +I+H D+K NILLDE+F + DFGLAK K+ + R
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVR 196
Query: 457 GTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNL-------DDEVTDTSICHN 509
G IG+IAPE S G S K+DV+ YG+M++E++ + DD+V
Sbjct: 197 GXIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 510 LIYE-RIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGS 566
L+ E ++E D G +EE + +I V C Q++P ERP M +V+ MLEG
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEE---VEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 152/299 (50%), Gaps = 33/299 (11%)
Query: 284 RYSYSDVKRMTKSFRDK--LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVAS 341
R D++ T +F K +G G +G+VYKG L DG VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 342 -ISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR--NIKLEWKTMYQIAIG 398
+S H ++V+ +GFC E + LIY+ M NG+L + ++ + + W+ +I IG
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGT 458
ARGL YLH I+H D+K NILLDE+F PKI+DFG++K+ + + +GT
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV----GCTKNLDDEVTDTSICHNLIYER 514
+GYI PE + + G ++ KSDVYS+G+++ E++ ++L E+ NL
Sbjct: 205 LGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV------NLAEWA 256
Query: 515 IEPGNDFQF---------DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+E N+ Q D + E +K + C+ + +RPSM VL LE
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAV----KCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 151/295 (51%), Gaps = 25/295 (8%)
Query: 284 RYSYSDVKRMTKSFRDK--LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVAS 341
R D++ T +F K +G G +G+VYKG L DG VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 342 -ISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR--NIKLEWKTMYQIAIG 398
+S H ++V+ +GFC E + LIY+ M NG+L + ++ + + W+ +I IG
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGT 458
ARGL YLH I+H D+K NILLDE+F PKI+DFG++K+ + +GT
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPG 518
+GYI PE + + G ++ KSDVYS+G+++ E++ C ++ + + NL +E
Sbjct: 205 LGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVL-CARSAIVQSLPREMV-NLAEWAVESH 260
Query: 519 NDFQF---------DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
N+ Q D + E +K + C+ + +RPSM VL LE
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAV----KCLALSSEDRPSMGDVLWKLE 311
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 20/294 (6%)
Query: 285 YSYSDVKRMTKSFRD--------KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE-- 334
+S+ ++K +T +F + K+G+GG+G VYKG + + + K+ EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 335 --FINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT 391
F E+ +++ H N+V LGF + L+Y MPNGSL D+ D L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
+IA G A G+ +LH + H DIK NILLDE F KISDFGLA+ ++K +
Sbjct: 129 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI 511
GT Y+APE G ++ KSD+YS+G++++E++ +D+ +
Sbjct: 186 XXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 242
Query: 512 YERIEPGNDFQF-DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
E + D + + + M V C+ ++RP + KV ++L+
Sbjct: 243 EIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 20/294 (6%)
Query: 285 YSYSDVKRMTKSFRD--------KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE-- 334
+S+ ++K +T +F + K+G+GG+G VYKG + + + K+ EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 335 --FINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT 391
F E+ +++ H N+V LGF + L+Y MPNGSL D+ D L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
+IA G A G+ +LH + H DIK NILLDE F KISDFGLA+ ++K +
Sbjct: 135 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI 511
GT Y+APE G ++ KSD+YS+G++++E++ +D+ +
Sbjct: 192 XXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248
Query: 512 YERIEPGNDFQF-DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
E + D + + + M V C+ ++RP + KV ++L+
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 20/294 (6%)
Query: 285 YSYSDVKRMTKSFRD--------KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE-- 334
+S+ ++K +T +F + K+G+GG+G VYKG + + + K+ EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 335 --FINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT 391
F E+ +++ H N+V LGF + L+Y MPNGSL D+ D L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
+IA G A G+ +LH + H DIK NILLDE F KISDFGLA+ ++K +
Sbjct: 135 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI 511
GT Y+APE G ++ KSD+YS+G++++E++ +D+ +
Sbjct: 192 XSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248
Query: 512 YERIEPGNDFQF-DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
E + D + + + M V C+ ++RP + KV ++L+
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 20/294 (6%)
Query: 285 YSYSDVKRMTKSFRD--------KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE-- 334
+S+ ++K +T +F + K G+GG+G VYKG + + + K+ EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 335 --FINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT 391
F E+ ++ H N+V LGF + L+Y PNGSL D+ D L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
+IA G A G+ +LH + H DIK NILLDE F KISDFGLA+ ++K +
Sbjct: 126 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI 511
GT Y APE G ++ KSD+YS+G++++E++ +D+ +
Sbjct: 183 XSRIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 239
Query: 512 YERIEPGNDFQF-DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
E + D + + + V C+ ++RP + KV ++L+
Sbjct: 240 EIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 22/283 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTSHVNIVT 352
+ ++K+G G +G V++ E G VAVK+L + E EF+ EVA + R H NIV
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHND-RNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
F+G + +++ E + GSL + +H +L+ + +A +A+G+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
IVH ++K N+L+D+ + K+ DFGL++ K + +S A GT ++APEV R
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVL--RD 213
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+ KSDVYS+G+++ E+ T NL ++ F+ +
Sbjct: 214 EPSNEKSDVYSFGVILWEL----------ATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQIPP 574
I+ G W P +RPS ++++L I++ PP
Sbjct: 264 LNPQVAAIIEGCWT--NEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 22/283 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTSHVNIVT 352
+ ++K+G G +G V++ E G VAVK+L + E EF+ EVA + R H NIV
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHND-RNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
F+G + +++ E + GSL + +H +L+ + +A +A+G+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
IVH D+K N+L+D+ + K+ DFGL++ K + A GT ++APEV R
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVL--RD 213
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+ KSDVYS+G+++ E+ T NL ++ F+ +
Sbjct: 214 EPSNEKSDVYSFGVILWEL----------ATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQIPP 574
I+ G W P +RPS ++++L I++ PP
Sbjct: 264 LNPQVAAIIEGCWT--NEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTA 185
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 186 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 236
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ EK M C Q NPS+RPS ++ + E
Sbjct: 237 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 180
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 181 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 231
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ EK M C Q NPS+RPS ++ + E
Sbjct: 232 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 185
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 186 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 236
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ EK M C Q NPS+RPS ++ + E
Sbjct: 237 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 185
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 186 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 236
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ EK M C Q NPS+RPS ++ + E
Sbjct: 237 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 68
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 128
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 129 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 184
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 185 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 235
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ EK M C Q NPS+RPS ++ + E
Sbjct: 236 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 180
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 181 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 231
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ EK M C Q NPS+RPS ++ + E
Sbjct: 232 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 19/285 (6%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASISRTSH 347
+++R + + KLG G YGEVY+G L VAVK LK EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
N+V LG C +I E M G+L ++ ++ + +A I+ +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
+ +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + APE
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPE-- 180
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
S + S KSDV+++G+++ E+ + I + +YE +E D++ +
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDPSQVYELLE--KDYRMERPE 233
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
EK M C Q NPS+RPS ++ + E + I
Sbjct: 234 GCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTA 181
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 182 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 232
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 233 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 180
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 181 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 231
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 232 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 180
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 181 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 231
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 232 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 129
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 185
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 186 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 236
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 237 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 180
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 181 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 231
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 232 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 19/269 (7%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 31 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E K + IA ARG++YLH I+H
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + + G+I ++APEV + S
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
+SDVY++G+++ E++ + I + + P V + K++
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP----DLSKVRSNCPKRMK 259
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLEMLE 564
++M C++ ERPS ++L +E
Sbjct: 260 RLMAE----CLKKKRDERPSFPRILAEIE 284
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 180
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 181 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 231
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 232 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 137
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 138 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 193
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 194 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 244
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 245 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 288
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 185
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 186 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 236
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 237 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 182
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 183 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 233
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 234 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTA 182
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 183 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 233
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 234 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTA 182
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 183 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 233
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 234 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 19/269 (7%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 31 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ A++ + SL +H K E K + IA ARG++YLH I+H
Sbjct: 89 STA-PQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + + G+I ++APEV + S
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
+SDVY++G+++ E++ + I + + P V + K++
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP----DLSKVRSNCPKRMK 259
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLEMLE 564
++M C++ ERPS ++L +E
Sbjct: 260 RLMAE----CLKKKRDERPSFPRILAEIE 284
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 285 YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASIS 343
Y +++R + + KLG G YGEVY+G L VAVK LK EEF+ E A +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
H N+V LG C +I E M G+L ++ ++ + +A I+ +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL + +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + A
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTA 181
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
PE S + S KSDV+++G+++ E+ + I + +YE +E D++
Sbjct: 182 PE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDLSQVYELLE--KDYRM 232
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
+ EK M C Q NPS+RPS ++ + E + I
Sbjct: 233 ERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 19/269 (7%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 19 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E K + IA ARG++YLH I+H
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKS---IIH 131
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + G+I ++APEV + S
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
+SDVY++G+++ E++ + I + + P V + K++
Sbjct: 192 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP----DLSKVRSNCPKRMK 247
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLEMLE 564
++M C++ ERPS ++L +E
Sbjct: 248 RLMAE----CLKKKRDERPSFPRILAEIE 272
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 139/304 (45%), Gaps = 30/304 (9%)
Query: 281 APKR-----------YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNS 328
APKR Y +++R + + KLG G YGEVY+G L VAVK LK
Sbjct: 197 APKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 256
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE 388
EEF+ E A + H N+V LG C +I E M G+L ++ ++
Sbjct: 257 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 316
Query: 389 WKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
+ +A I+ +EYL + +H ++ +N L+ E+ K++DFGL++ ++
Sbjct: 317 AVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDT 372
Query: 449 AISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+ A+ I + APE S + S KSDV+++G+++ E+ + I
Sbjct: 373 YTAHAGAKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDL 425
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIE 568
+ +YE +E D++ + EK M C Q NPS+RPS ++ + E +
Sbjct: 426 SQVYELLE--KDYRMERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQ 478
Query: 569 NLQI 572
I
Sbjct: 479 ESSI 482
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 107/197 (54%), Gaps = 13/197 (6%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFI---NEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+LK E+F NEVA + +T HVNI+ F+G
Sbjct: 43 RIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG- 99
Query: 357 CYENKKN-ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
Y K N A++ + SL K +H + K + + IA A+G++YLH I+
Sbjct: 100 -YMTKDNLAIVTQWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAK---NII 154
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-V 474
H D+K NI L E KI DFGLA + + + G++ ++APEV +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 475 SHKSDVYSYGMMIIEMV 491
S +SDVYSYG+++ E++
Sbjct: 215 SFQSDVYSYGIVLYELM 231
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 19/285 (6%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASISRTSH 347
+++R + + KLG G YGEVY+G L VAVK LK EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
N+V LG C +I E M G+L ++ ++ + +A I+ +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
+ +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + APE
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPE-- 180
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
S + S KSDV+++G+++ E+ + I + +YE +E D++ +
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDPSQVYELLE--KDYRMERPE 233
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
EK M C Q NPS+RPS ++ + E + I
Sbjct: 234 GCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 140/304 (46%), Gaps = 30/304 (9%)
Query: 281 APKR-----------YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNS 328
APKR Y +++R + + KLG G YGEVY+G L VAVK LK
Sbjct: 236 APKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 295
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE 388
EEF+ E A + H N+V LG C +I E M G+L ++ ++
Sbjct: 296 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 355
Query: 389 WKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
+ +A I+ +EYL + +H ++ +N L+ E+ K++DFGL++ ++
Sbjct: 356 AVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDT 411
Query: 449 AISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+ A+ I + APE S + S KSDV+++G+++ E+ T + I
Sbjct: 412 YTAHAGAKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEI--ATYGMSPY---PGIDL 464
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIE 568
+ +YE +E D++ + EK M C Q NPS+RPS ++ + E +
Sbjct: 465 SQVYELLE--KDYRMERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQ 517
Query: 569 NLQI 572
I
Sbjct: 518 ESSI 521
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 30/296 (10%)
Query: 281 APKR-----------YSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNS 328
APKR Y +++R + + KLG G YGEVY+G L VAVK LK
Sbjct: 194 APKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 253
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE 388
EEF+ E A + H N+V LG C +I E M G+L ++ ++
Sbjct: 254 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 313
Query: 389 WKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
+ +A I+ +EYL + +H ++ +N L+ E+ K++DFGL++ ++
Sbjct: 314 AVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDT 369
Query: 449 AISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+ A+ I + APE S + S KSDV+++G+++ E+ + I
Sbjct: 370 YTAHAGAKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDL 422
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ +YE +E D++ + EK M C Q NPS+RPS ++ + E
Sbjct: 423 SQVYELLE--KDYRMERPEGCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 471
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 19/285 (6%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASISRTSH 347
+++R + + KLG G +GEVY+G L VAVK LK EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
N+V LG C +I E M G+L ++ ++ + +A I+ +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
+ +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + APE
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPE-- 180
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
S + S KSDV+++G+++ E+ + I + +YE +E D++ +
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----PYPGIDPSQVYELLE--KDYRMERPE 233
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
EK M C Q NPS+RPS ++ + E + I
Sbjct: 234 GCPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 27/293 (9%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 78 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 135
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 136 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAIN 192
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 193 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 243
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPS---MHKVLEMLEGSIENLQIPPKP 576
EE ++ ++ C + P +RP+ + VLE + E Q P+P
Sbjct: 244 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTATEG-QFQPQP 288
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 71 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 128
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAIN 185
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 186 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 236
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 237 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 70 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 127
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 128 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAIN 184
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 185 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 235
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 236 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 266
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAIN 183
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 184 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 234
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 235 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAIN 183
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 184 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 234
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 235 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAIN 189
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 190 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 240
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 241 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 77 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 134
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 135 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAIN 191
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 192 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 242
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 243 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 273
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAIN 183
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 184 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 234
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 235 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAIN 189
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 190 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 240
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 241 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 74 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 131
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 132 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAIN 188
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 189 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 239
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 240 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 270
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 79 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 136
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 137 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAIN 193
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 194 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 244
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 245 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 64 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 121
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 122 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAIN 178
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 179 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 229
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 230 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 260
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 130/278 (46%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G GEV+ G VAVK LK + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT-AREGAKFPIKWTAPEAIN 183
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 184 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 234
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 235 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 265
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 19/268 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F ++G G +G V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C E L++E M +G L ++ R + +T+ + + + G+ YL C ++
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+ E+ K+SDFG+ + + S + + + +PEV+S F S
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFS--FSRYS 185
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSDV+S+G+++ E+ + ++ + ++ + E I G +A+ +I
Sbjct: 186 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM 240
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLEML 563
C + P +RP+ ++L L
Sbjct: 241 NH-------CWRERPEDRPAFSRLLRQL 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 19/268 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F ++G G +G V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C E L++E M +G L ++ R + +T+ + + + G+ YL C ++
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+ E+ K+SDFG+ + + S + + + +PEV+S F S
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFS--FSRYS 180
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSDV+S+G+++ E+ + ++ + ++ + E I G +A+ +I
Sbjct: 181 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM 235
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLEML 563
C + P +RP+ ++L L
Sbjct: 236 NH-------CWKERPEDRPAFSRLLRQL 256
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 64 KLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 123 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ-GAKFPIKWTAPE--A 176
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELT 199
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 19/268 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F ++G G +G V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C E L++E M +G L ++ R + +T+ + + + G+ YL C ++
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+ E+ K+SDFG+ + + S + + + +PEV+S F S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFS--FSRYS 182
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSDV+S+G+++ E+ + ++ + ++ + E I G +A+ +I
Sbjct: 183 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM 237
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLEML 563
C + P +RP+ ++L L
Sbjct: 238 NH-------CWKERPEDRPAFSRLLRQL 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
+V R T ++LG G +GEV+ G VAVK LK + + F+ E + + H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M NGSL F+ IKL + +A IA G+ ++
Sbjct: 65 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 122
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H +++ NIL+ + KI+DFGLA+ + E + A+ I + APE +
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAIN 179
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI--YERIEPGNDFQFDGV 526
+G + KSDV+S+G+++ E+V + +T+ + NL Y + P N
Sbjct: 180 --YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------- 230
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
EE ++ ++ C + P +RP+ + +LE
Sbjct: 231 CPEELYQLMRL-------CWKERPEDRPTFDYLRSVLE 261
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 132/284 (46%), Gaps = 19/284 (6%)
Query: 280 LAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEV 339
L P+ + + +F ++G G +G V+ G + VA+K +K + ++FI E
Sbjct: 14 LVPRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEA 73
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGI 399
+ + SH +V G C E L++E M +G L ++ R + +T+ + + +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDV 132
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
G+ YL C ++H D+ +N L+ E+ K+SDFG+ + + S + +
Sbjct: 133 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPV 188
Query: 460 GYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGN 519
+ +PEV+S F S KSDV+S+G+++ E+ + ++ + ++ + E I G
Sbjct: 189 KWASPEVFS--FSRYSSKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGF 241
Query: 520 DFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
+A+ +I C + P +RP+ ++L L
Sbjct: 242 RLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 278
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 240 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 299 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 352
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELT 375
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 240 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 299 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 352
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELT 375
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASISRTSH 347
+++R + + KLG G YGEVY G L VAVK LK EEF+ E A + H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
N+V LG C ++ E MP G+L ++ ++ + +A I+ +EYL
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
+ +H D+ +N L+ E+ K++DFGL++ ++ + A+ I + APE
Sbjct: 148 KK---NFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPE-- 201
Query: 468 SRRFGGVSHKSDVYSYGMMIIEM 490
S + S KSDV+++G+++ E+
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 15 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + + G+I ++APEV + S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 188 FQSDVYAFGIVLYELM 203
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E +I E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ-GAKFPIKWTAPE--A 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELT 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 35 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 147
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + + G+I ++APEV + S
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 208 FQSDVYAFGIVLYELM 223
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 323 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 382 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 435
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELT 458
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 63 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 122 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 175
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELT 198
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 124 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 177
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELT 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 67 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 126 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 179
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELT 202
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 43 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + + G+I ++APEV + S
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 216 FQSDVYAFGIVLYELM 231
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 240 KLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 299 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 352
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELT 375
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E +I E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELT 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 19/268 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F ++G G +G V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C E L+ E M +G L ++ R + +T+ + + + G+ YL C ++
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+ E+ K+SDFG+ + + S + + + +PEV+S F S
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFS--FSRYS 183
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSDV+S+G+++ E+ + ++ + ++ + E I G +A+ +I
Sbjct: 184 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM 238
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLEML 563
C + P +RP+ ++L L
Sbjct: 239 NH-------CWRERPEDRPAFSRLLRQL 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELT 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELT 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 26/245 (10%)
Query: 250 HSRTVIQALIKKKTREDDRNV--EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYG 307
H + Q L KK R V + ++ NHE L +++G+G +G
Sbjct: 84 HLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLV---------------LGEQIGRGNFG 128
Query: 308 EVYKGEL-PDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFCYENKKNA 364
EV+ G L D LVAVK + + +F+ E + + SH NIV +G C + +
Sbjct: 129 EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188
Query: 365 LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNI 424
++ EL+ G F+ + +L KT+ Q+ A G+EYL C +H D+ +N
Sbjct: 189 IVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNC 244
Query: 425 LLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYG 484
L+ E KISDFG++++ A S + + + APE + +G S +SDV+S+G
Sbjct: 245 LVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN--YGRYSSESDVWSFG 302
Query: 485 MMIIE 489
+++ E
Sbjct: 303 ILLWE 307
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 74 KLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELT 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 19/276 (6%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 241 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGL + + E A+ I + APE +
Sbjct: 300 ---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ-GAKFPIKWTAPE--A 353
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
+G + KSDV+S+G+++ E+ TK V + + + +++E G
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELT--TKG---RVPYPGMVNREVLDQVERGYRMP---CPP 405
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
E + + +M C + +P ERP+ + LE
Sbjct: 406 ECPESLHDLMCQ----CWRKDPEERPTFEYLQAFLE 437
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 15 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + G+I ++APEV + S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 188 FQSDVYAFGIVLYELM 203
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 20 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + G+I ++APEV + S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 193 FQSDVYAFGIVLYELM 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 17 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 129
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + G+I ++APEV + S
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 190 FQSDVYAFGIVLYELM 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 26/245 (10%)
Query: 250 HSRTVIQALIKKKTREDDRNV--EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYG 307
H + Q L KK R V + ++ NHE L +++G+G +G
Sbjct: 84 HLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLV---------------LGEQIGRGNFG 128
Query: 308 EVYKGEL-PDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFCYENKKNA 364
EV+ G L D LVAVK + + +F+ E + + SH NIV +G C + +
Sbjct: 129 EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188
Query: 365 LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNI 424
++ EL+ G F+ + +L KT+ Q+ A G+EYL C +H D+ +N
Sbjct: 189 IVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNC 244
Query: 425 LLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYG 484
L+ E KISDFG++++ A S + + + APE + +G S +SDV+S+G
Sbjct: 245 LVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN--YGRYSSESDVWSFG 302
Query: 485 MMIIE 489
+++ E
Sbjct: 303 ILLWE 307
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 20 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + G+I ++APEV + S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 193 FQSDVYAFGIVLYELM 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 42 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 154
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + G+I ++APEV + S
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 215 FQSDVYAFGIVLYELM 230
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + +A IA G+ Y+ R
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D+ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 133 ---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELT 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 43 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ + A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + G+I ++APEV + S
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 216 FQSDVYAFGIVLYELM 231
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
++G G +G VYKG+ VAVK+L + ++ F NEV + +T HVNI+ F+G+
Sbjct: 15 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
+ A++ + SL +H K E + IA A+G++YLH I+H
Sbjct: 73 S-TAPQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-VS 475
D+K NI L ED KI DFGLA + + G+I ++APEV + S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 476 HKSDVYSYGMMIIEMV 491
+SDVY++G+++ E++
Sbjct: 188 FQSDVYAFGIVLYELM 203
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 19/268 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F ++G G +G V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C E L++E M +G L ++ R + +T+ + + + G+ YL + ++
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLE---EASVI 125
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+ E+ K+SDFG+ + + S + + + +PEV+S F S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFS--FSRYS 182
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSDV+S+G+++ E+ + ++ + ++ + E I G +A+ +I
Sbjct: 183 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM 237
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLEML 563
C + P +RP+ ++L L
Sbjct: 238 NH-------CWKERPEDRPAFSRLLRQL 258
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + ++ IA G+ Y+ R
Sbjct: 71 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 130 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ-GAKFPIKWTAPE--A 183
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELT 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 134/276 (48%), Gaps = 19/276 (6%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++KR + +LG G +G V G+ VAVK++K + +EF E ++ + SH
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V F G C + ++ E + NG L ++ + LE + ++ + G+ +L
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D+ +N L+D D C K+SDFG+ + + +S + + + + APEV+
Sbjct: 123 H---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVF- 177
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
+ S KSDV+++G+++ E+ K D T++ + ++ G+ +A+
Sbjct: 178 -HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV-----LKVSQGHRLYRPHLAS 231
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ I ++M + C P +RP+ ++L +E
Sbjct: 232 D---TIYQIM----YSCWHELPEKRPTFQQLLSSIE 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L + ++ IA G+ Y+ R
Sbjct: 71 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 130 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 183
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELT 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M G L F+ + L + +A IA G+ Y+ R
Sbjct: 74 KLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELT 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLGQG +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M G L F+ + L + +A IA G+ Y+ R
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ VH D++ NIL+ E+ K++DFGLA+ + E A+ I + APE +
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPE--A 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
+G + KSDV+S+G+++ E+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELT 209
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + +LG G +GEV+ G + VAVK LK + + F+ E + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + +I E M GSL F+ +D K+ + + IA G+ Y+ R
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+H D++ N+L+ E KI+DFGLA+ + E + A+ I + APE +
Sbjct: 129 K---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAIN 184
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
FG + KSDV+S+G+++ E+V
Sbjct: 185 --FGCFTIKSDVWSFGILLYEIV 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 6/203 (2%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLG G +GEV+ G + VAVK LK + + F+ E + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V + + +I E M GSL F+ +D K+ + + IA G+ Y+ R
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+H D++ N+L+ E KI+DFGLA+ + E + A+ I + APE +
Sbjct: 128 K---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAIN 183
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
FG + KS+V+S+G+++ E+V
Sbjct: 184 --FGCFTIKSNVWSFGILLYEIV 204
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 281 APKRYSYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLV----AVKVLKNSRCNGE-- 333
AP + +K LG G +G VYKG +P+G+ V A+K+L +
Sbjct: 26 APNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 85
Query: 334 EFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMY 393
EF++E ++ H ++V LG C + L+ +LMP+G L +++H ++ + + +
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKD-NIGSQLLL 143
Query: 394 QIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML 453
+ IA+G+ YL + R+VH D+ +N+L+ KI+DFGLA+ + E +
Sbjct: 144 NWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 200
Query: 454 HARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ I ++A E ++ R+F +H+SDV+SYG+ I E++
Sbjct: 201 GGKMPIKWMALECIHYRKF---THQSDVWSYGVTIWELM 236
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 281 APKRYSYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLV----AVKVLKNSRCNGE-- 333
AP + +K LG G +G VYKG +P+G+ V A+K+L +
Sbjct: 3 APNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 334 EFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMY 393
EF++E ++ H ++V LG C + L+ +LMP+G L +++H ++ + + +
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKD-NIGSQLLL 120
Query: 394 QIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML 453
+ IA+G+ YL + R+VH D+ +N+L+ KI+DFGLA+ + E +
Sbjct: 121 NWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 177
Query: 454 HARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ I ++A E ++ R+F +H+SDV+SYG+ I E++
Sbjct: 178 GGKMPIKWMALECIHYRKF---THQSDVWSYGVTIWELM 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 19/276 (6%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + +LG G +GEV+ G VA+K LK + E F+ E + + H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V E + ++ E M GSL F+ + L+ + +A +A G+ Y+ R
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
+ +H D++ NIL+ KI+DFGLA+ + E A+ I + APE +
Sbjct: 124 ---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ-GAKFPIKWTAPE--A 177
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
+G + KSDV+S+G+++ E+V TK V + + + E++E G +
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELV--TKG---RVPYPGMNNREVLEQVERGYR-----MPC 227
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
++ I+ +++ W + +P ERP+ + LE
Sbjct: 228 PQDCPISLHELMIHCW--KKDPEERPTFEYLQSFLE 261
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 301 LGQGGYGEVYKGELPDGQ-----LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTF 353
+G G +GEVYKG L VA+K LK + +F+ E + + SH NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
G + K +I E M NG+LDKF+ +++ + + + GIA G++YL +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLRGIAAGMKYL---ANMN 167
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RRF 471
VH D+ +NIL++ + K+SDFGL++ + E+ + + I + APE S R+F
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF 227
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+ SDV+S+G+++ E++
Sbjct: 228 ---TSASDVWSFGIVMWEVM 244
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLG G +GEV+ VAVK +K + E F+ E + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V L + +I E M GSL F+ +D K + + IA G+ ++
Sbjct: 71 KLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 128
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
Q +H D++ NIL+ KI+DFGLA+ + E + A+ I + APE +
Sbjct: 129 --QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAIN 185
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
FG + KSDV+S+G++++E+V
Sbjct: 186 --FGSFTIKSDVWSFGILLMEIV 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVY---KGELPD-GQLVAVKVLKNSRCNGEEFINEVASISRTSHVN--IVTFL 354
LGQG +G+V+ K PD G L A+KVLK + + + + VN V L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 355 GFCYENK-KNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+ ++ + K LI + + G L F + + + + +A GL++LH +
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALGLDHLH---SLG 150
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE-SAISMLHARGTIGYIAPEVYSRRFG 472
I++ D+KP+NILLDE+ K++DFGL+K+A E A S GT+ Y+APEV +R+
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC---GTVEYMAPEVVNRQ-- 205
Query: 473 GVSHKSDVYSYGMMIIEMV 491
G SH +D +SYG+++ EM+
Sbjct: 206 GHSHSADWWSYGVLMFEML 224
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLG G +GEV+ VAVK +K + E F+ E + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V L + +I E M GSL F+ +D K + + IA G+ ++
Sbjct: 244 KLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 301
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
Q +H D++ NIL+ KI+DFGLA+ + E + A+ I + APE +
Sbjct: 302 --QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAIN 358
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
FG + KSDV+S+G++++E+V
Sbjct: 359 --FGSFTIKSDVWSFGILLMEIV 379
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 34/241 (14%)
Query: 273 FIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLK 326
I H+ K S S V+ F ++LG+ +G+VYKG L Q VA+K LK
Sbjct: 11 LINQHKQAKLKEISLSAVR-----FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 327 NSRCNG---EEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFI---- 379
+ + G EEF +E +R H N+V LG +++ ++I+ +G L +F+
Sbjct: 66 D-KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS 124
Query: 380 --------HNDRNIK--LEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDED 429
+DR +K LE + IA G+EYL +VH D+ +N+L+ +
Sbjct: 125 PHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDK 181
Query: 430 FCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
KISD GL ++ + + ++ I ++APE +G S SD++SYG+++ E
Sbjct: 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWE 239
Query: 490 M 490
+
Sbjct: 240 V 240
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 301 LGQGGYGEVYKG-ELPDGQ----LVAVKVLK--NSRCNGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +PDG+ VA+KVL+ S +E ++E ++ +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
LG C + L+ +LMP G L + +R +L + + + IA+G+ YL VR
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRG-RLGSQDLLNWCMQIAKGMSYLE---DVR 139
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
+VH D+ +N+L+ KI+DFGLA+ E+ + I ++A E + RRF
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF- 198
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+H+SDV+SYG+ + E++
Sbjct: 199 --THQSDVWSYGVTVWELM 215
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 138/306 (45%), Gaps = 46/306 (15%)
Query: 297 FRDKLGQGGYGEVYKGELPDGQL---VAVKVLKN--SRCNGEEFINEVASISRTSH-VNI 350
F+D +G+G +G+V K + L A+K +K S+ + +F E+ + + H NI
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIK--------------LEWKTMYQIA 396
+ LG C L E P+G+L F+ R ++ L + + A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR 456
+ARG++YL Q + +H D+ +NIL+ E++ KI+DFGL++ +E + R
Sbjct: 139 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 457 GTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL---IYE 513
+ ++A E S + + SDV+SYG+++ E+V + T C +YE
Sbjct: 193 LPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVS--------LGGTPYCGMTCAELYE 242
Query: 514 RIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQIP 573
++ G + +E + + C + P ERPS ++L L +E +
Sbjct: 243 KLPQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQILVSLNRMLEERKTY 295
Query: 574 PKPSLF 579
+L+
Sbjct: 296 VNTTLY 301
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYEN 360
+G+G +G+V G+ G VAVK +KN + F+ E + +++ H N+V LG E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 361 KKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDI 419
K ++ E M GSL ++ + L + + ++ + +EYL VH D+
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDL 134
Query: 420 KPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSD 479
+N+L+ ED K+SDFGL K+A + + + + APE + R S KSD
Sbjct: 135 AARNVLVSEDNVAKVSDFGLTKEASSTQDT-----GKLPVKWTAPE--ALREAAFSTKSD 187
Query: 480 VYSYGMMIIEM 490
V+S+G+++ E+
Sbjct: 188 VWSFGILLWEI 198
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 138/306 (45%), Gaps = 46/306 (15%)
Query: 297 FRDKLGQGGYGEVYKGELPDGQL---VAVKVLKN--SRCNGEEFINEVASISRTSH-VNI 350
F+D +G+G +G+V K + L A+K +K S+ + +F E+ + + H NI
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIK--------------LEWKTMYQIA 396
+ LG C L E P+G+L F+ R ++ L + + A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR 456
+ARG++YL Q + +H D+ +NIL+ E++ KI+DFGL++ +E + R
Sbjct: 149 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 457 GTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL---IYE 513
+ ++A E S + + SDV+SYG+++ E+V + T C +YE
Sbjct: 203 LPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVS--------LGGTPYCGMTCAELYE 252
Query: 514 RIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQIP 573
++ G + +E + + C + P ERPS ++L L +E +
Sbjct: 253 KLPQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQILVSLNRMLEERKTY 305
Query: 574 PKPSLF 579
+L+
Sbjct: 306 VNTTLY 311
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKNSRCNG-EEFINEVASI 342
+KR + +LG+G +G+V+ E D LVAVK LK++ N ++F E +
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFI-----------HNDRNIKLEWKT 391
+ H +IV F G C E +++E M +G L+KF+ + +L
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
M IA IA G+ YL VH D+ +N L+ E+ KI DFG+++ +
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 452 MLHARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEM 490
H I ++ PE + R+F + +SDV+S G+++ E+
Sbjct: 187 GGHTMLPIRWMPPESIMYRKF---TTESDVWSLGVVLWEI 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHV 348
++ R + KLG G +GEV+ VAVK +K + E F+ E + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+V L + +I E M GSL F+ +D K + + IA G+ ++
Sbjct: 238 KLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 295
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
Q +H D++ NIL+ KI+DFGLA+ + A+ I + APE +
Sbjct: 296 --QRNYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPEAIN 342
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
FG + KSDV+S+G++++E+V
Sbjct: 343 --FGSFTIKSDVWSFGILLMEIV 363
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEVASISRTSH-VNIVTFLG-FC 357
+G G YG+VYKG + GQL A+KV+ + EE E+ + + SH NI T+ G F
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 358 YENKKNA-----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+N L+ E GS+ I N + L+ + + I I RGL +LH Q
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QH 148
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS---R 469
+++H DIK QN+LL E+ K+ DFG++ Q + + GT ++APEV +
Sbjct: 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF--IGTPYWMAPEVIACDEN 206
Query: 470 RFGGVSHKSDVYSYGMMIIEMV 491
KSD++S G+ IEM
Sbjct: 207 PDATYDFKSDLWSLGITAIEMA 228
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNG-----EEFINEVASISRTSHVNI 350
+ + +G GG+G+VY+ G VAVK ++ E E + H NI
Sbjct: 10 TLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDR---NIKLEWKTMYQIAIGIARGLEYLH 407
+ G C + L+ E G L++ + R +I + W A+ IARG+ YLH
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLH 122
Query: 408 RGCQVRIVHFDIKPQNILLDEDF--------CPKISDFGLAKQAQKKESAISMLHARGTI 459
V I+H D+K NIL+ + KI+DFGLA++ + + + A G
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT----TKMSAAGAY 178
Query: 460 GYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
++APEV R S SDV+SYG+++ E++
Sbjct: 179 AWMAPEVI--RASMFSKGSDVWSYGVLLWELL 208
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYEN 360
+G+G +G+V G+ G VAVK +KN + F+ E + +++ H N+V LG E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 361 KKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDI 419
K ++ E M GSL ++ + L + + ++ + +EYL VH D+
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDL 315
Query: 420 KPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSD 479
+N+L+ ED K+SDFGL K+A + + + + APE + R S KSD
Sbjct: 316 AARNVLVSEDNVAKVSDFGLTKEASSTQDT-----GKLPVKWTAPE--ALREKKFSTKSD 368
Query: 480 VYSYGMMIIEM 490
V+S+G+++ E+
Sbjct: 369 VWSFGILLWEI 379
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYEN 360
+G+G +G+V G+ G VAVK +KN + F+ E + +++ H N+V LG E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 361 KKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDI 419
K ++ E M GSL ++ + L + + ++ + +EYL VH D+
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDL 128
Query: 420 KPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSD 479
+N+L+ ED K+SDFGL K+A + + + + APE + R S KSD
Sbjct: 129 AARNVLVSEDNVAKVSDFGLTKEASSTQDT-----GKLPVKWTAPE--ALREKKFSTKSD 181
Query: 480 VYSYGMMIIEM 490
V+S+G+++ E+
Sbjct: 182 VWSFGILLWEI 192
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 168
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 229 QTQKF---TTKSDVWSFGVLLWELM 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 141
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 202 QTQKF---TTKSDVWSFGVLLWELM 223
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 148
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 209 QTQKF---TTKSDVWSFGVLLWELM 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 149
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 210 QTQKF---TTKSDVWSFGVLLWELM 231
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYEN 360
+G+G +G+V G+ G VAVK +KN + F+ E + +++ H N+V LG E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 361 KKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDI 419
K ++ E M GSL ++ + L + + ++ + +EYL VH D+
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDL 143
Query: 420 KPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSD 479
+N+L+ ED K+SDFGL K+A + + + + APE + S KSD
Sbjct: 144 AARNVLVSEDNVAKVSDFGLTKEASSTQDT-----GKLPVKWTAPEALREK--KFSTKSD 196
Query: 480 VYSYGMMIIEM 490
V+S+G+++ E+
Sbjct: 197 VWSFGILLWEI 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 29/217 (13%)
Query: 297 FRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKNSRCNG---EEFINEVASISRTSH 347
F ++LG+ +G+VYKG L Q VA+K LK+ + G EEF +E +R H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAMLRARLQH 71
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFI------------HNDRNIK--LEWKTMY 393
N+V LG +++ ++I+ +G L +F+ +DR +K LE
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 394 QIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML 453
+ IA G+EYL +VH D+ +N+L+ + KISD GL ++ + +
Sbjct: 132 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 454 HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
++ I ++APE +G S SD++SYG+++ E+
Sbjct: 189 NSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 147
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 208 QTQKF---TTKSDVWSFGVLLWELM 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 144
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 205 QTQKF---TTKSDVWSFGVLLWELM 226
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 167
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 228 QTQKF---TTKSDVWSFGVLLWELM 249
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 148
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 209 QTQKF---TTKSDVWSFGVLLWELM 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 146
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 207 QTQKF---TTKSDVWSFGVLLWELM 228
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL--- 149
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 210 QTQKF---TTKSDVWSFGVLLWELM 231
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 46/306 (15%)
Query: 297 FRDKLGQGGYGEVYKGELPDGQL---VAVKVLKN--SRCNGEEFINEVASISRTSH-VNI 350
F+D +G+G +G+V K + L A+K +K S+ + +F E+ + + H NI
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIK--------------LEWKTMYQIA 396
+ LG C L E P+G+L F+ R ++ L + + A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR 456
+ARG++YL Q + +H ++ +NIL+ E++ KI+DFGL++ +E + R
Sbjct: 146 ADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 199
Query: 457 GTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL---IYE 513
+ ++A E S + + SDV+SYG+++ E+V + T C +YE
Sbjct: 200 LPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVS--------LGGTPYCGMTCAELYE 249
Query: 514 RIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQIP 573
++ G + +E + + C + P ERPS ++L L +E +
Sbjct: 250 KLPQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQILVSLNRMLEERKTY 302
Query: 574 PKPSLF 579
+L+
Sbjct: 303 VNTTLY 308
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 166
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGLA+ + E+A + + I + +PE + R+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 227 F---TSASDVWSYGIVLWEVM 244
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 297 FRDKLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGE--------EFINEVASISRTSH 347
+ ++G+GG+G V+KG L D +VA+K L GE EF EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
NIV G + + ++ E +P G L + D+ ++W ++ + IA G+EY+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYM- 138
Query: 408 RGCQVRIVHFDIKPQNILL---DED--FCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
+ IVH D++ NI L DE+ C K++DFGL++Q+ S + G ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL-----LGNFQWM 193
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDD 499
APE + K+D YS+ M++ ++ D+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 166
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 227 F---TSASDVWSYGIVLWEVM 244
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G+++L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL--- 154
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 215 QTQKF---TTKSDVWSFGVLLWELM 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G+++L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL--- 147
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 208 QTQKF---TTKSDVWSFGVLLWELM 229
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G+++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL--- 150
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 211 QTQKF---TTKSDVWSFGVLLWELM 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G+++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL--- 150
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 211 QTQKF---TTKSDVWSFGVLLWELM 232
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G+++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL--- 149
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 210 QTQKF---TTKSDVWSFGVLLWELM 231
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G+++L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL--- 208
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 269 QTQKF---TTKSDVWSFGVLLWELM 290
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 166
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 227 F---TSASDVWSYGIVLWEVM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 137
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 198 F---TSASDVWSYGIVLWEVM 215
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 17/205 (8%)
Query: 297 FRDKLGQGGYGEVYKGELPD--GQLV--AVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
F + +G+G +G VY G L D G+ + AVK L GE +F+ E + SH N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 351 VTFLGFCYENKKNALI-YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
++ LG C ++ + L+ M +G L FI N+ + K + + +A+G+++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL--- 149
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-V 466
+ VH D+ +N +LDE F K++DFGLA+ KE S + A+ + ++A E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMV 491
+++F + KSDV+S+G+++ E++
Sbjct: 210 QTQKF---TTKSDVWSFGVLLWELM 231
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 137
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 198 F---TSASDVWSYGIVLWEVM 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 139/281 (49%), Gaps = 33/281 (11%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK+ + +F++E + + + H N++
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 355 GFCYENKKNALIYELMPNGSLDKFI-HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
G ++ +I E M NGSLD F+ ND + + + GIA G++YL +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMN 155
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA---ISMLHARGTIGYIAPE-VYSR 469
VH D+ +NIL++ + K+SDFGL++ + S S L + I + APE + R
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Query: 470 RFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYE-RIEPGNDFQFDGVAT 528
+F + SDV+SYG+++ E++ + ++T+ + + + + R+ P D
Sbjct: 216 KF---TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDC------- 265
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIEN 569
+ ++M+ C Q + + RP +++ L+ I N
Sbjct: 266 --PSALHQLMLD----CWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 154
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 215 F---TSASDVWSYGIVLWEVM 232
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 166
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 227 F---TSASDVWSYGIVLWEVM 244
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 131/298 (43%), Gaps = 40/298 (13%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNG-EEFINEVASI 342
+KR + +LG+G +G+V+ E D LVAVK LK+ ++F E +
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIH------------NDRNIK--LE 388
+ H +IV F G C + +++E M +G L+KF+ R K L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 389 WKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
M IA IA G+ YL VH D+ +N L+ + KI DFG+++ +
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 449 AISMLHARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSIC 507
H I ++ PE + R+F + +SDV+S+G+++ E+ K ++++T +
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKF---TTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI 245
Query: 508 HNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEG 565
+ R+ E + K + V C Q P +R ++ ++ ++L
Sbjct: 246 ECITQGRV------------LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHA 291
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 19/286 (6%)
Query: 275 RNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE 334
+N S A Y ++ +F +LG G +G V G+ VA+K++K + +E
Sbjct: 6 KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 335 FINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQ 394
FI E + SH +V G C + + +I E M NG L ++ R+ + + + + +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLE 124
Query: 395 IAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH 454
+ + +EYL + +H D+ +N L+++ K+SDFGL++ E S +
Sbjct: 125 MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET-SSVG 180
Query: 455 ARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYER 514
++ + + PEV + S KSD++++G+++ E+ K + T++ E
Sbjct: 181 SKFPVRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EH 233
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I G +A+E K+ +M + C ERP+ +L
Sbjct: 234 IAQGLRLYRPHLASE---KVYTIM----YSCWHEKADERPTFKILL 272
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 22/235 (9%)
Query: 270 VEAFIRNHESLAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKG--ELPDGQ--LVAV 322
+ F+ H P + + K + S +G G +GEV G +LP + VA+
Sbjct: 19 LRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 323 KVLKNSRCNGE--EFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFI- 379
K LK + +F+ E + + + H NI+ G ++K ++ E M NGSLD F+
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 380 -HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFG 438
H+ + ++ M + GIA G++YL + VH D+ +NIL++ + K+SDFG
Sbjct: 139 KHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 439 LAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RRFGGVSHKSDVYSYGMMIIEMV 491
L++ + E+A + + I + +PE + R+F + SDV+SYG+++ E++
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 166
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 227 F---TSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 166
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 227 F---TSASDVWSYGIVLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 166
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 227 F---TSASDVWSYGIVLWEVM 244
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 291 KRMTKSFRDKLGQGGYGEV----YKGELPD-GQLVAVKVLKNSRCNGE--EFINEVASIS 343
KR K RD LG+G +G+V Y E + G+ VAVK LK + E+ +
Sbjct: 20 KRFLKRIRD-LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR 78
Query: 344 RTSHVNIVTFLGFCYENKKNA--LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIAR 401
H NIV + G C E+ N LI E +P+GSL +++ ++N K+ K + A+ I +
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICK 137
Query: 402 GLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGT-IG 460
G++YL G + + VH D+ +N+L++ + KI DFGL K + + ++ R + +
Sbjct: 138 GMDYL--GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 461 YIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ APE + ++ SDV+S+G+ + E++
Sbjct: 195 WYAPECLMQSKFYIA--SDVWSFGVTLHELL 223
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 164
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL++ + E+A + + I + +PE + R+
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 225 F---TSASDVWSYGIVLWEVM 242
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 291 KRMTKSFRDKLGQGGYGEV----YKGELPD-GQLVAVKVLKNSRCNGE--EFINEVASIS 343
KR K RD LG+G +G+V Y E + G+ VAVK LK + E+ +
Sbjct: 8 KRFLKRIRD-LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR 66
Query: 344 RTSHVNIVTFLGFCYENKKNA--LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIAR 401
H NIV + G C E+ N LI E +P+GSL +++ ++N K+ K + A+ I +
Sbjct: 67 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICK 125
Query: 402 GLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGT-IG 460
G++YL G + + VH D+ +N+L++ + KI DFGL K + + ++ R + +
Sbjct: 126 GMDYL--GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 461 YIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ APE + ++ SDV+S+G+ + E++
Sbjct: 183 WYAPECLMQSKFYIA--SDVWSFGVTLHELL 211
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 19/201 (9%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK + +F+ E + + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G ++K ++ E M NGSLD F+ H+ + ++ M + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDM 166
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RR 470
VH D+ +NIL++ + K+SDFGL + + E+A + + I + +PE + R+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E++
Sbjct: 227 F---TSASDVWSYGIVLWEVM 244
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 19/286 (6%)
Query: 275 RNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE 334
+N S A Y ++ +F +LG G +G V G+ VA+K++K + +E
Sbjct: 6 KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 335 FINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQ 394
FI E + SH +V G C + + +I E M NG L ++ R+ + + + + +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLE 124
Query: 395 IAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH 454
+ + +EYL + +H D+ +N L+++ K+SDFGL++ E S +
Sbjct: 125 MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVG 180
Query: 455 ARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYER 514
++ + + PEV + S KSD++++G+++ E+ K + T++ E
Sbjct: 181 SKFPVRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EH 233
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I G +A+E K+ +M + C ERP+ +L
Sbjct: 234 IAQGLRLYRPHLASE---KVYTIM----YSCWHEKADERPTFKILL 272
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 41/300 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 64
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK--------- 390
+ + + ++V LG + + +I ELM G L ++ R+++ E +
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPS 121
Query: 391 --TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
M Q+A IA G+ YL+ + VH D+ +N ++ EDF KI DFG+ + + +
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 449 AISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+ +++PE S + G + SDV+S+G+++ E+ + +++ +
Sbjct: 179 XRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 236
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIE 568
F +G ++ M++ + C Q NP RPS +++ ++ +E
Sbjct: 237 ------------FVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPD---GQL---VAVKVLKNSRCNGE--EFINEVA 340
+V R + +LGQG +G VY+G D G+ VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 341 SISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE-----------W 389
+ + ++V LG + + ++ ELM +G L ++ R+++ E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTL 129
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA 449
+ M Q+A IA G+ YL+ + VH D+ +N ++ DF KI DFG+ + + +
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 450 ISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHN 509
+ ++APE S + G + SD++S+G+++ E+ + +++ +
Sbjct: 187 RKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK- 243
Query: 510 LIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSI 567
F DG ++ + + + C Q NP+ RP+ +++ +L+ +
Sbjct: 244 -----------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 31/279 (11%)
Query: 301 LGQGGYGEVYKGEL--PDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G L P + VA+K LK + + +F++E + + + H NI+
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
G + K +I E M NGSLD F+ + + + + GI G++YL +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLRGIGSGMKYL---SDMSA 152
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RRFG 472
VH D+ +NIL++ + K+SDFG+++ + E+A + + I + APE + R+F
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF- 211
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYE--RIEPGNDFQFDGVATEE 530
+ SDV+SYG+++ E++ + ++++ + I E R+ P D
Sbjct: 212 --TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLPPPMDC--------- 259
Query: 531 EKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIEN 569
IA +++ W Q S+RP +++ ML+ I N
Sbjct: 260 --PIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLIRN 294
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 297 FRDKLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGE--------EFINEVASISRTSH 347
+ ++G+GG+G V+KG L D +VA+K L GE EF EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
NIV G + + ++ E +P G L + D+ ++W ++ + IA G+EY+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYM- 138
Query: 408 RGCQVRIVHFDIKPQNILL---DED--FCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
+ IVH D++ NI L DE+ C K++DFG ++Q+ S + G ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL-----LGNFQWM 193
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDD 499
APE + K+D YS+ M++ ++ D+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELP----DGQLVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV +G L VA+K LK + EF++E + + + H NI+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 355 GFCYENKKNALIYELMPNGSLDKFIH-NDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
G + ++ E M NG+LD F+ ND + + + GIA G+ YL ++
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL---AEMS 138
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES---AISMLHARGTIGYIAPEVYSRR 470
VH D+ +NIL++ + K+SDFGL++ ++ S S L + I + APE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA-- 196
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SD +SYG+++ E++
Sbjct: 197 FRKFTSASDAWSYGIVMWEVM 217
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELP----DGQLVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV +G L VA+K LK + EF++E + + + H NI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 355 GFCYENKKNALIYELMPNGSLDKFIH-NDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
G + ++ E M NG+LD F+ ND + + + GIA G+ YL ++
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL---AEMS 136
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA---ISMLHARGTIGYIAPEVYSRR 470
VH D+ +NIL++ + K+SDFGL++ ++ S S L + I + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA-- 194
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
F + SD +SYG+++ E++
Sbjct: 195 FRKFTSASDAWSYGIVMWEVM 215
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 31/279 (11%)
Query: 301 LGQGGYGEVYKGEL--PDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G L P + VA+K LK + + +F++E + + + H NI+
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
G + K +I E M NGSLD F+ + + + + GI G++YL +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLRGIGSGMKYLS---DMSY 137
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RRFG 472
VH D+ +NIL++ + K+SDFG+++ + E+A + + I + APE + R+F
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF- 196
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYE--RIEPGNDFQFDGVATEE 530
+ SDV+SYG+++ E++ + ++++ + I E R+ P D
Sbjct: 197 --TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLPPPMDC--------- 244
Query: 531 EKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIEN 569
IA +++ W Q S+RP +++ ML+ I N
Sbjct: 245 --PIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLIRN 279
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 39/298 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPD---GQL---VAVKVLKNSRCNGE--EFINEVA 340
+V R + +LGQG +G VY+G D G+ VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 341 SISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE-----------W 389
+ + ++V LG + + ++ ELM +G L ++ R+++ E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTL 129
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA 449
+ M Q+A IA G+ YL+ + VH D+ +N ++ DF KI DFG+ + + +
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 450 ISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHN 509
+ ++APE S + G + SD++S+G+++ E+ + +++ +
Sbjct: 187 RKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK- 243
Query: 510 LIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSI 567
F DG ++ + + + C Q NP RP+ +++ +L+ +
Sbjct: 244 -----------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 20/276 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F +LG G +G V G+ VA+K++K + +EFI E + SH +V G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C + + +I E M NG L ++ R+ + + + + ++ + +EYL + +
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+++ K+SDFGL++ E S + ++ + + PEV + S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVL--MYSKFS 184
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSD++++G+++ E+ K + T++ E I G +A+E K+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EHIAQGLRLYRPHLASE---KVY 236
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLE-MLEGSIENL 570
+M + C ERP+ +L +L+ ENL
Sbjct: 237 TIM----YSCWHEKADERPTFKILLSNILDVMDENL 268
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 31/279 (11%)
Query: 301 LGQGGYGEVYKGEL--PDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G L P + VA+K LK + + +F++E + + + H NI+
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
G + K +I E M NGSLD F+ + + + + GI G++YL +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLRGIGSGMKYLS---DMSY 131
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS-RRFG 472
VH D+ +NIL++ + K+SDFG+++ + E+A + + I + APE + R+F
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF- 190
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYE--RIEPGNDFQFDGVATEE 530
+ SDV+SYG+++ E++ + ++++ + I E R+ P D
Sbjct: 191 --TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLPPPMDC--------- 238
Query: 531 EKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIEN 569
IA +++ W Q S+RP +++ ML+ I N
Sbjct: 239 --PIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLIRN 273
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 23/203 (11%)
Query: 301 LGQGGYGEVYKG--------ELPDGQLVAVKVLKNSRCNGE--EFINEVASISRTSHVNI 350
+G G +GEV G ELP VA+K LK + +F+ E + + + H NI
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELP----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFI-HNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ G ++K ++ E M NGSLD F+ ND + + + GI+ G++YL
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMKYL--- 140
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYS 468
+ VH D+ +NIL++ + K+SDFGL++ + E+A + + I + APE +
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 469 RRFGGVSHKSDVYSYGMMIIEMV 491
F + SDV+SYG+++ E+V
Sbjct: 201 --FRKFTSASDVWSYGIVMWEVV 221
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 137/300 (45%), Gaps = 41/300 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 73
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK--------- 390
+ + + ++V LG + + +I ELM G L ++ R+++ E +
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPS 130
Query: 391 --TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
M Q+A IA G+ YL+ + VH D+ +N ++ EDF KI DFG+ + + +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 187
Query: 449 AISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+ +++PE S + G + SDV+S+G+++ E+ + +++ +
Sbjct: 188 XRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 245
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIE 568
F +G ++ M+ + C Q NP RPS +++ ++ +E
Sbjct: 246 ------------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 39/298 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPD---GQL---VAVKVLKNSRCNGE--EFINEVA 340
+V R + +LGQG +G VY+G D G+ VAVK + S E EF+NE +
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 341 SISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE-----------W 389
+ + ++V LG + + ++ ELM +G L ++ R+++ E
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTL 126
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA 449
+ M Q+A IA G+ YL+ + VH D+ +N ++ DF KI DFG+ + + +
Sbjct: 127 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 183
Query: 450 ISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHN 509
+ ++APE S + G + SD++S+G+++ E+ + +++ +
Sbjct: 184 RKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK- 240
Query: 510 LIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSI 567
F DG ++ + + + C Q NP RP+ +++ +L+ +
Sbjct: 241 -----------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 133/276 (48%), Gaps = 43/276 (15%)
Query: 300 KLGQGGYGEVY--KGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTF 353
KLG G YGEV K +L G A+K++K S N ++EVA + + H NI+
Sbjct: 28 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 354 LGFCYENKKN-ALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
F +E+K+N L+ E+ G L D+ I + +++ + + + G YLH+
Sbjct: 87 YEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QVLSGTTYLHKH-- 140
Query: 412 VRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
IVH D+KP+N+LL+ D KI DFGL+ E M GT YIAPEV
Sbjct: 141 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLR 196
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFD---- 524
+++ K DV+S G +I+ ++ C TD I +R+E G F FD
Sbjct: 197 KKY---DEKCDVWSCG-VILYILLCGYPPFGGQTDQEIL-----KRVEKGK-FSFDPPDW 246
Query: 525 GVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
++E K++ K+M + PS+R S + L
Sbjct: 247 TQVSDEAKQLVKLM-------LTYEPSKRISAEEAL 275
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 297 FRDKLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGE--------EFINEVASISRTSH 347
+ ++G+GG+G V+KG L D +VA+K L GE EF EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
NIV G + + ++ E +P G L + D+ ++W ++ + IA G+EY+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYM- 138
Query: 408 RGCQVRIVHFDIKPQNILL---DED--FCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
+ IVH D++ NI L DE+ C K++DF L++Q+ S + G ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL-----LGNFQWM 193
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDD 499
APE + K+D YS+ M++ ++ D+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 50/312 (16%)
Query: 279 SLAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN-- 327
S A K S SD+K + + + LG G +GEVY+G++ P VAVK L
Sbjct: 14 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 73
Query: 328 SRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR---- 383
S + +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 74 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 384 -NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISD 436
L + +A IA G +YL +H DI +N LL CP KI D
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGD 187
Query: 437 FGLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
FG+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 188 FGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFS 241
Query: 493 CTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSE 552
++ + +F G + K + + C Q P +
Sbjct: 242 LGYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 553 RPSMHKVLEMLE 564
RP+ +LE +E
Sbjct: 290 RPNFAIILERIE 301
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F +LG G +G V G+ VA+K++K + +EFI E + SH +V G
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C + + +I E M NG L ++ R+ + + + + ++ + +EYL + +
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFL 126
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+++ K+SDFGL++ E S + ++ + + PEV + S
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVL--MYSKFS 183
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSD++++G+++ E+ K + T++ E I G +A+E K+
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EHIAQGLRLYRPHLASE---KVY 235
Query: 536 KMMILVGFWCIQTNPSERPSMHKVL 560
+M + C ERP+ +L
Sbjct: 236 TIM----YSCWHEKADERPTFKILL 256
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGELPDGQL---VAVKVL----KNSRCNGEEFINEVASISRTSHVNIV 351
DKLG GG VY E D L VA+K + + + F EV + S+ SH NIV
Sbjct: 17 DKLGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
+ + E+ L+ E + +L ++I + + L T I G+++ H
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAH---D 129
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
+RIVH DIKPQNIL+D + KI DFG+AK A + S H GT+ Y +PE +
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAK-ALSETSLTQTNHVLGTVQYFSPE--QAKG 186
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+D+YS G+++ EM+
Sbjct: 187 EATDECTDIYSIGIVLYEML 206
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R LE+ K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 145/320 (45%), Gaps = 49/320 (15%)
Query: 277 HESLAPKRYSYSDV--------KRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVA 321
+ S+ P+ +S +DV R + +LGQG +G VY+G + P+ + VA
Sbjct: 23 YASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VA 81
Query: 322 VKVLKNSRCNGE--EFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFI 379
+K + + E EF+NE + + + ++V LG + + +I ELM G L ++
Sbjct: 82 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
Query: 380 HNDRNIKLEWK-----------TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDE 428
R+++ E + M Q+A IA G+ YL+ + VH D+ +N ++ E
Sbjct: 142 ---RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 195
Query: 429 DFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMII 488
DF KI DFG+ + + + + +++PE S + G + SDV+S+G+++
Sbjct: 196 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLW 253
Query: 489 EMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQT 548
E+ + +++ + F +G ++ M+ + C Q
Sbjct: 254 EIATLAEQPYQGLSNEQVLR------------FVMEGGLLDKPDNCPDMLFELMRMCWQY 301
Query: 549 NPSERPSMHKVLEMLEGSIE 568
NP RPS +++ ++ +E
Sbjct: 302 NPKMRPSFLEIISSIKEEME 321
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F +LG G +G V G+ VA+K++K + +EFI E + SH +V G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C + + +I E M NG L ++ R+ + + + + ++ + +EYL + +
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFL 122
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+++ K+SDFGL++ E S + ++ + + PEV + S
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVL--MYSKFS 179
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSD++++G+++ E+ K + T++ E I G +A+E K+
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EHIAQGLRLYRPHLASE---KVY 231
Query: 536 KMMILVGFWCIQTNPSERPSMHKVL 560
+M + C ERP+ +L
Sbjct: 232 TIM----YSCWHEKADERPTFKILL 252
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 50/312 (16%)
Query: 279 SLAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN-- 327
S A K S SD+K + + + LG G +GEVY+G++ P VAVK L
Sbjct: 14 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 73
Query: 328 SRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR---- 383
S + +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 384 -NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISD 436
L + +A IA G +YL +H DI +N LL CP KI D
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGD 187
Query: 437 FGLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
FG+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 188 FGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFS 241
Query: 493 CTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSE 552
++ + +F G + K + + C Q P +
Sbjct: 242 LGYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 553 RPSMHKVLEMLE 564
RP+ +LE +E
Sbjct: 290 RPNFAIILERIE 301
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 139/302 (46%), Gaps = 47/302 (15%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPD---GQL---VAVKVLKNSRCNGE--EFINEVA 340
+V R + +LGQG +G VY+G D G+ VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 341 SISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE-----------W 389
+ + ++V LG + + ++ ELM +G L ++ R+++ E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTL 129
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ----AQK 445
+ M Q+A IA G+ YL+ + VH D+ +N ++ DF KI DFG+ + A
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY 186
Query: 446 KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTS 505
++ +L R ++APE S + G + SD++S+G+++ E+ + +++
Sbjct: 187 RKGGKGLLPVR----WMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 506 ICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEG 565
+ F DG ++ + + + C Q NP RP+ +++ +L+
Sbjct: 241 VLK------------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
Query: 566 SI 567
+
Sbjct: 289 DL 290
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F +LG G +G V G+ VA+K++K + +EFI E + SH +V G
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C + + +I E M NG L ++ R+ + + + + ++ + +EYL + +
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFL 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+ +N L+++ K+SDFGL++ E S + ++ + + PEV + S
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVL--MYSKFS 190
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
KSD++++G+++ E+ K + T++ E I G +A+E K+
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EHIAQGLRLYRPHLASE---KVY 242
Query: 536 KMMILVGFWCIQTNPSERPSMHKVL 560
+M + C ERP+ +L
Sbjct: 243 TIM----YSCWHEKADERPTFKILL 263
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 21/201 (10%)
Query: 300 KLGQGGYGEVYKGELPD-GQLVAVKVLKN-SRCNGEEFINEVASISRTSHVNIVTFLGFC 357
+LG G +G+VYK + + G L A KV++ S E++I E+ ++ H IV LG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 358 YENKKNALIYELMPNGSLDK-FIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + K ++ E P G++D + DR + T QI + + LE L+ RI+H
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGL-----TEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 417 FDIKPQNILLDEDFCPKISDFGLA----KQAQKKESAISMLHARGTIGYIAPEVY---SR 469
D+K N+L+ + +++DFG++ K QK++S I GT ++APEV +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCETM 194
Query: 470 RFGGVSHKSDVYSYGMMIIEM 490
+ +K+D++S G+ +IEM
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 140/315 (44%), Gaps = 43/315 (13%)
Query: 279 SLAPKRYSYSDV--------KRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVK 323
S+ P+ +S +DV R + +LGQG +G VY+G + P+ + VA+K
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIK 61
Query: 324 VLKNSRCNGE--EFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHN 381
+ + E EF+NE + + + ++V LG + + +I ELM G L ++ +
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 382 DRNIKL--------EWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPK 433
R M Q+A IA G+ YL+ + VH D+ +N ++ EDF K
Sbjct: 122 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178
Query: 434 ISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
I DFG+ + + + + +++PE S + G + SDV+S+G+++ E+
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATL 236
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
+ +++ + F +G ++ M+ + C Q NP R
Sbjct: 237 AEQPYQGLSNEQVLR------------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMR 284
Query: 554 PSMHKVLEMLEGSIE 568
PS +++ ++ +E
Sbjct: 285 PSFLEIISSIKEEME 299
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 21/201 (10%)
Query: 300 KLGQGGYGEVYKGELPD-GQLVAVKVLKN-SRCNGEEFINEVASISRTSHVNIVTFLGFC 357
+LG G +G+VYK + + G L A KV++ S E++I E+ ++ H IV LG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 358 YENKKNALIYELMPNGSLDK-FIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + K ++ E P G++D + DR + T QI + + LE L+ RI+H
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGL-----TEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 417 FDIKPQNILLDEDFCPKISDFGLA----KQAQKKESAISMLHARGTIGYIAPEVY---SR 469
D+K N+L+ + +++DFG++ K QK++S I GT ++APEV +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCETM 186
Query: 470 RFGGVSHKSDVYSYGMMIIEM 490
+ +K+D++S G+ +IEM
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 50/312 (16%)
Query: 279 SLAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN-- 327
S A K S SD+K + + + LG G +GEVY+G++ P VAVK L
Sbjct: 20 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 79
Query: 328 SRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR---- 383
S + +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 80 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 384 -NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISD 436
L + +A IA G +YL +H DI +N LL CP KI D
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGD 193
Query: 437 FGLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
FG+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 194 FGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFS 247
Query: 493 CTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSE 552
++ + +F G + K + + C Q P +
Sbjct: 248 LGYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 295
Query: 553 RPSMHKVLEMLE 564
RP+ +LE +E
Sbjct: 296 RPNFAIILERIE 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 50/312 (16%)
Query: 279 SLAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN-- 327
S A K S SD+K + + + LG G +GEVY+G++ P VAVK L
Sbjct: 14 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 73
Query: 328 SRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR---- 383
S + +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 384 -NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISD 436
L + +A IA G +YL +H DI +N LL CP KI D
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGD 187
Query: 437 FGLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
FG+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 188 FGMAQDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFS 241
Query: 493 CTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSE 552
++ + +F G + K + + C Q P +
Sbjct: 242 LGYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 553 RPSMHKVLEMLE 564
RP+ +LE +E
Sbjct: 290 RPNFAIILERIE 301
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 49/318 (15%)
Query: 279 SLAPKRYSYSDV--------KRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVK 323
S+ P+ +S +DV R + +LGQG +G VY+G + P+ + VA+K
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIK 61
Query: 324 VLKNSRCNGE--EFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHN 381
+ + E EF+NE + + + ++V LG + + +I ELM G L ++
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-- 119
Query: 382 DRNIKLEWK-----------TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
R+++ E + M Q+A IA G+ YL+ + VH D+ +N ++ EDF
Sbjct: 120 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
KI DFG+ + + + + +++PE S + G + SDV+S+G+++ E+
Sbjct: 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 233
Query: 491 VGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNP 550
+ +++ + F +G ++ M+ + C Q NP
Sbjct: 234 ATLAEQPYQGLSNEQVLR------------FVMEGGLLDKPDNCPDMLFELMRMCWQYNP 281
Query: 551 SERPSMHKVLEMLEGSIE 568
RPS +++ ++ +E
Sbjct: 282 KMRPSFLEIISSIKEEME 299
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 133/276 (48%), Gaps = 43/276 (15%)
Query: 300 KLGQGGYGEVY--KGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTF 353
KLG G YGEV K +L G A+K++K S N ++EVA + + H NI+
Sbjct: 11 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 354 LGFCYENKKN-ALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
F +E+K+N L+ E+ G L D+ I + +++ + + + G YLH+
Sbjct: 70 YEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QVLSGTTYLHKH-- 123
Query: 412 VRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
IVH D+KP+N+LL+ D KI DFGL+ E M GT YIAPEV
Sbjct: 124 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLR 179
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFD---- 524
+++ K DV+S G +I+ ++ C TD I +R+E G F FD
Sbjct: 180 KKY---DEKCDVWSCG-VILYILLCGYPPFGGQTDQEIL-----KRVEKGK-FSFDPPDW 229
Query: 525 GVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
++E K++ K+M+ PS+R S + L
Sbjct: 230 TQVSDEAKQLVKLMLTY-------EPSKRISAEEAL 258
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R LE+ K +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 198 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 230
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R LE+ K +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 205 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 237
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 25/268 (9%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+F +LG G +G V G+ VA+K++K + +EFI E + SH +V G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C + + +I E M NG L ++ R+ + + + + ++ + +EYL + +
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGT---IGYIAPEVYSRRFG 472
H D+ +N L+++ K+SDFGL++ E S RG+ + + PEV +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----RGSKFPVRWSPPEVLM--YS 181
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEK 532
S KSD++++G+++ E+ K + T++ E I G +A+E
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EHIAQGLRLYRPHLASE--- 233
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKVL 560
K+ +M + C ERP+ +L
Sbjct: 234 KVYTIM----YSCWHEKADERPTFKILL 257
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R LE+ K +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 202 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 234
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 49/304 (16%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 73
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK--------- 390
+ + + ++V LG + + +I ELM G L ++ R+++ E +
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPS 130
Query: 391 --TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQK--- 445
M Q+A IA G+ YL+ + VH D+ +N ++ EDF KI DFG+ + +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
Query: 446 -KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDT 504
++ +L R +++PE S + G + SDV+S+G+++ E+ + +++
Sbjct: 188 YRKGGKGLLPVR----WMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 505 SICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ F +G ++ M+ + C Q NP RPS +++ ++
Sbjct: 242 QVLR------------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
Query: 565 GSIE 568
+E
Sbjct: 290 EEME 293
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRTS-HVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R LE+ K +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 254 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 286
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 137/300 (45%), Gaps = 41/300 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK--------- 390
+ + + ++V LG + + +I ELM G L ++ R+++ E +
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPS 129
Query: 391 --TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
M Q+A IA G+ YL+ + VH D+ +N ++ EDF KI DFG+ + + +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 449 AISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+ +++PE S + G + SDV+S+G+++ E+ + +++ +
Sbjct: 187 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIE 568
F +G ++ M+ + C Q NP RPS +++ ++ +E
Sbjct: 245 ------------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R LE+ K +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 206 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 238
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN--S 328
A K S SD+K + + + LG G +GEVY+G++ P VAVK L S
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 88
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+ +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 89 EQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 202
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 256
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 257 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 305 PNFAIILERIE 315
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 111/224 (49%), Gaps = 41/224 (18%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINE--VASISRTSHVNIVTFLGFCY 358
+G+G YG VYKG L D + VAVKV S N + FINE + + H NI F+
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFI--VG 75
Query: 359 ENKKNA-------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH---- 407
+ + A L+ E PNGSL K++ + +W + ++A + RGL YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTELP 132
Query: 408 RGCQVR--IVHFDIKPQNILLDEDFCPKISDFGLA---------KQAQKKESAISMLHAR 456
RG + I H D+ +N+L+ D ISDFGL+ + ++ +AIS +
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV--- 189
Query: 457 GTIGYIAPEVYS-----RRFGGVSHKSDVYSYGMMIIEM-VGCT 494
GTI Y+APEV R + D+Y+ G++ E+ + CT
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 35/297 (11%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 69
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKL--------EWKT 391
+ + + ++V LG + + +I ELM G L ++ + R
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
M Q+A IA G+ YL+ + VH D+ +N ++ EDF KI DFG+ + + +
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI 511
+ +++PE S + G + SDV+S+G+++ E+ + +++ +
Sbjct: 187 GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 241
Query: 512 YERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIE 568
F +G ++ M+ + C Q NP RPS +++ ++ +E
Sbjct: 242 ---------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R LE+ K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R LE+ K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 245
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN--S 328
A K S SD+K + + + LG G +GEVY+G++ P VAVK L S
Sbjct: 6 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 65
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+ +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 66 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 125
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 126 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 179
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 180 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 233
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 234 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 281
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 282 PNFAIILERIE 292
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 49/304 (16%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK--------- 390
+ + + ++V LG + + +I ELM G L ++ R+++ E +
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPS 129
Query: 391 --TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQK--- 445
M Q+A IA G+ YL+ + VH D+ +N ++ EDF KI DFG+ + +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 446 -KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDT 504
++ +L R +++PE S + G + SDV+S+G+++ E+ + +++
Sbjct: 187 YRKGGKGLLPVR----WMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 505 SICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ F +G ++ M+ + C Q NP RPS +++ ++
Sbjct: 241 QVLR------------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
Query: 565 GSIE 568
+E
Sbjct: 289 EEME 292
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 50/312 (16%)
Query: 279 SLAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN-- 327
S A K S SD+K + + + LG G +GEVY+G++ P VAVK L
Sbjct: 40 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 99
Query: 328 SRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR---- 383
S + +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 384 -NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISD 436
L + +A IA G +YL +H DI +N LL CP KI D
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGD 213
Query: 437 FGLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
FG+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 214 FGMARDIYRASYYRKGGCAML----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFS 267
Query: 493 CTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSE 552
++ + +F G + K + + C Q P +
Sbjct: 268 LGYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 315
Query: 553 RPSMHKVLEMLE 564
RP+ +LE +E
Sbjct: 316 RPNFAIILERIE 327
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 49/304 (16%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 70
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK--------- 390
+ + + ++V LG + + +I ELM G L ++ R+++ E +
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPS 127
Query: 391 --TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQK--- 445
M Q+A IA G+ YL+ + VH D+ +N ++ EDF KI DFG+ + +
Sbjct: 128 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 184
Query: 446 -KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDT 504
++ +L R +++PE S + G + SDV+S+G+++ E+ + +++
Sbjct: 185 YRKGGKGLLPVR----WMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 238
Query: 505 SICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ F +G ++ M+ + C Q NP RPS +++ ++
Sbjct: 239 QVLR------------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
Query: 565 GSIE 568
+E
Sbjct: 287 EEME 290
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKNSRC 330
A K S SD+K + + + LG G +GEVY+G++ P VAVK L
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYS 88
Query: 331 NGEE--FINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+E F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 202
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 256
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 257 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 305 PNFAIILERIE 315
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 49/304 (16%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK--------- 390
+ + + ++V LG + + +I ELM G L ++ R+++ E +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPS 123
Query: 391 --TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQK--- 445
M Q+A IA G+ YL+ + VH D+ +N ++ EDF KI DFG+ + +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 446 -KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDT 504
++ +L R +++PE S + G + SDV+S+G+++ E+ + +++
Sbjct: 181 YRKGGKGLLPVR----WMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 505 SICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ F +G ++ M+ + C Q NP RPS +++ ++
Sbjct: 235 QVLR------------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
Query: 565 GSIE 568
+E
Sbjct: 283 EEME 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 39/298 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPD---GQL---VAVKVLKNSRCNGE--EFINEVA 340
+V R + +LGQG +G VY+G D G+ VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 341 SISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE-----------W 389
+ + ++V LG + + ++ ELM +G L ++ R+++ E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTL 129
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA 449
+ M Q+A IA G+ YL+ + VH D+ +N ++ DF KI DFG+ + + +
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 450 ISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHN 509
+ ++APE S + G + SD++S+G+++ E+ + +++ +
Sbjct: 187 RKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK- 243
Query: 510 LIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSI 567
F DG ++ + + + C Q NP RP+ +++ +L+ +
Sbjct: 244 -----------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 301 LGQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G +GEV G +LP + VA+K LK+ + +F++E + + + H N++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 355 GFCYENKKNALIYELMPNGSLDKFI-HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
G ++ +I E M NGSLD F+ ND + + + GIA G++YL +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMN 129
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA---ISMLHARGTIGYIAPE-VYSR 469
VH + +NIL++ + K+SDFGL++ + S S L + I + APE + R
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 470 RFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYE-RIEPGNDFQFDGVAT 528
+F + SDV+SYG+++ E++ + ++T+ + + + + R+ P D
Sbjct: 190 KF---TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDC------- 239
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIEN 569
+ ++M+ C Q + + RP +++ L+ I N
Sbjct: 240 --PSALHQLMLD----CWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQ----------IAIGIA 400
LG C + +I E G+L ++ + RN + +K +Y+ + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 401 RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIG 460
+G+E+L + +H D+ +NILL E KI DFGLA+ K + AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 461 YIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYERIEPGN 519
++APE R + +SDV+S+G+++ E+ + V D C R++ G
Sbjct: 212 WMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RRLKEGT 264
Query: 520 DFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
+ T E M C PS+RP+ +++E L
Sbjct: 265 RMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 34/219 (15%)
Query: 299 DKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE------FINEVASISRTSHVNIVT 352
+K+G+G YG VYK + G++VA LK R + E+ I E++ + H NIV+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVA---LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIH------NDRNIKLEWKTMYQIAIGIARGLEYL 406
+ + + L++E M L K + D IK+ +YQ+ RG+ +
Sbjct: 84 LIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKI---YLYQLL----RGVAHC 135
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEV 466
H Q RI+H D+KPQN+L++ D K++DFGLA+ S H T+ Y AP+V
Sbjct: 136 H---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDV 190
Query: 467 Y--SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTD 503
S+++ S D++S G + EM+ K L VTD
Sbjct: 191 LMGSKKY---STSVDIWSIGCIFAEMI-TGKPLFPGVTD 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN--S 328
A K S SD+K + + + LG G +GEVY+G++ P VAVK L S
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 88
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+ +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 148
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 202
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 256
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 257 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 305 PNFAIILERIE 315
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN--S 328
A K S SD+K + + + LG G +GEVY+G++ P VAVK L S
Sbjct: 14 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 73
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+ +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 133
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 187
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 188 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 241
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 242 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 290 PNFAIILERIE 300
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 136
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 197 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 246
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 247 --IDVYMIMVKCWMIDAD--SRPKFRELI 271
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 49/304 (16%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-------ELPDGQLVAVKVLKNSRCNGE--EFINEV 339
+V R + +LGQG +G VY+G + P+ + VA+K + + E EF+NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK--------- 390
+ + + ++V LG + + +I ELM G L ++ R+++ E +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPS 123
Query: 391 --TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQK--- 445
M Q+A IA G+ YL+ + VH D+ +N + EDF KI DFG+ + +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 446 -KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDT 504
++ +L R +++PE S + G + SDV+S+G+++ E+ + +++
Sbjct: 181 YRKGGKGLLPVR----WMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 505 SICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ F +G ++ M++ + C Q NP RPS +++ ++
Sbjct: 235 QVLR------------FVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
Query: 565 GSIE 568
+E
Sbjct: 283 EEME 286
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 286 SYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLK-NSRCNGEEFINEVASIS 343
S D K+ F +K+GQG G VY ++ GQ VA++ + + E INE+ +
Sbjct: 14 SVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 72
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+ NIV +L + ++ E + GSL + ++ + + + L
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQAL 129
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
E+LH +++H DIK NILL D K++DFG Q ++S S + GT ++A
Sbjct: 130 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTPYWMA 184
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
PEV +R+ G K D++S G+M IEM+
Sbjct: 185 PEVVTRKAYG--PKVDIWSLGIMAIEMI 210
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN--S 328
A K S SD+K + + + LG G +GEVY+G++ P VAVK L S
Sbjct: 14 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 73
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+ +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 133
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 187
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 188 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 241
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 242 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 290 PNFAIILERIE 300
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 34/219 (15%)
Query: 299 DKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE------FINEVASISRTSHVNIVT 352
+K+G+G YG VYK + G++VA LK R + E+ I E++ + H NIV+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVA---LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIH------NDRNIKLEWKTMYQIAIGIARGLEYL 406
+ + + L++E M L K + D IK+ +YQ+ RG+ +
Sbjct: 84 LIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKI---YLYQLL----RGVAHC 135
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEV 466
H Q RI+H D+KPQN+L++ D K++DFGLA+ S H T+ Y AP+V
Sbjct: 136 H---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDV 190
Query: 467 Y--SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTD 503
S+++ S D++S G + EM+ K L VTD
Sbjct: 191 LMGSKKY---STSVDIWSIGCIFAEMI-TGKPLFPGVTD 225
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 286 SYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLK-NSRCNGEEFINEVASIS 343
S D K+ F +K+GQG G VY ++ GQ VA++ + + E INE+ +
Sbjct: 14 SVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 72
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+ NIV +L + ++ E + GSL + ++ + + + L
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQAL 129
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
E+LH +++H DIK NILL D K++DFG Q ++S S + GT ++A
Sbjct: 130 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTPYWMA 184
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
PEV +R+ G K D++S G+M IEM+
Sbjct: 185 PEVVTRKAYG--PKVDIWSLGIMAIEMI 210
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 135
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 196 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 245
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 246 --IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 138
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 199 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 248
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 249 --IDVYMIMVKCWMIDAD--SRPKFRELI 273
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 136
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 197 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 246
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 247 --IDVYMIMVKCWMIDAD--SRPKFRELI 271
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 139/302 (46%), Gaps = 47/302 (15%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPD---GQL---VAVKVLKNSRCNGE--EFINEVA 340
+V R + +LGQG +G VY+G D G+ VAVK + S E EF+NE +
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 341 SISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE-----------W 389
+ + ++V LG + + ++ ELM +G L ++ R+++ E
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTL 128
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQK---- 445
+ M Q+A IA G+ YL+ + VH D+ +N ++ DF KI DFG+ + +
Sbjct: 129 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 185
Query: 446 KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTS 505
++ +L R ++APE S + G + SD++S+G+++ E+ + +++
Sbjct: 186 RKGGKGLLPVR----WMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 239
Query: 506 ICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEG 565
+ F DG ++ + + + C Q NP RP+ +++ +L+
Sbjct: 240 VLK------------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
Query: 566 SI 567
+
Sbjct: 288 DL 289
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN--S 328
A K S SD+K + + + LG G +GEVY+G++ P VAVK L S
Sbjct: 32 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 91
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+ +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 92 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 151
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 152 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 205
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 206 GMARDIYRAGYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 259
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 260 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 307
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 308 PNFAIILERIE 318
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 137
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 198 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 247
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 248 --IDVYMIMVKCWMIDAD--SRPKFRELI 272
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 286 SYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLK-NSRCNGEEFINEVASIS 343
S D K+ F +K+GQG G VY ++ GQ VA++ + + E INE+ +
Sbjct: 15 SVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 73
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+ NIV +L + ++ E + GSL + ++ + + + L
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQAL 130
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
E+LH +++H DIK NILL D K++DFG Q ++S S + GT ++A
Sbjct: 131 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTPYWMA 185
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
PEV +R+ G K D++S G+M IEM+
Sbjct: 186 PEVVTRKAYG--PKVDIWSLGIMAIEMI 211
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 139
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 200 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 249
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 250 --IDVYMIMVKCWMIDAD--SRPKFRELI 274
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 135
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 196 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 245
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 246 --IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN--S 328
A K S SD+K + + + LG G +GEVY+G++ P VAVK L S
Sbjct: 31 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 90
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+ +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 91 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 150
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 151 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 204
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 205 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 258
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 259 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 306
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 307 PNFAIILERIE 317
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 142
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 203 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 252
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 253 --IDVYMIMVKCWMIDAD--SRPKFRELI 277
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 141
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 202 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 251
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 252 --IDVYMIMVKCWMIDAD--SRPKFRELI 276
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 280 LAPKRYSYSDVKRMTK---SFRDKLGQGGYGEVYKGEL------PDGQLVAVKVLKN--S 328
A K S SD+K + + + LG G +GEVY+G++ P VAVK L S
Sbjct: 55 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 114
Query: 329 RCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR----- 383
+ +F+ E IS+ +H NIV +G ++ ++ ELM G L F+ R
Sbjct: 115 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 174
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP------KISDF 437
L + +A IA G +YL +H DI +N LL CP KI DF
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 228
Query: 438 GLAKQAQK----KESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
G+A+ + ++ +ML + ++ PE + G + K+D +S+G+++ E+
Sbjct: 229 GMARDIYRAGYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 282
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
++ + +F G + K + + C Q P +R
Sbjct: 283 GYMPYPSKSNQEVL------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 330
Query: 554 PSMHKVLEMLE 564
P+ +LE +E
Sbjct: 331 PNFAIILERIE 341
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 135
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 196 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 245
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 246 --IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 138
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 199 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 248
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 249 --IDVYMIMVKCWMIDAD--SRPKFRELI 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 160
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 221 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 270
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 271 --IDVYMIMVKCWMIDAD--SRPKFRELI 295
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 137
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 198 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 247
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 248 --IDVYMIMVKCWMIDAD--SRPKFRELI 272
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELP-DGQL---VAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G GEV G L GQ VA+K LK + +F++E + + + H NI+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G + ++ E M NGSLD F+ H+ + ++ M + G+ G+ YL +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL---SDL 170
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYSRRF 471
VH D+ +N+L+D + K+SDFGL++ + ++A + + I + APE + F
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA--F 228
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
S SDV+S+G+++ E++
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGE----LP--DGQLVAVKVLKN-SRCNGEEFINEVASI 342
+KR + +LG+G +G+V+ E LP D LVAVK LK S ++F E +
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHN---DRNI----------KLEW 389
+ H +IV F G C E + +++E M +G L++F+ + D + L
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE-- 447
+ +A +A G+ YL + VH D+ +N L+ + KI DFG+++ +
Sbjct: 158 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214
Query: 448 --SAISMLHARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEM 490
+ML R ++ PE + R+F + +SDV+S+G+++ E+
Sbjct: 215 RVGGRTMLPIR----WMPPESILYRKF---TTESDVWSFGVVLWEI 253
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 286 SYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLK-NSRCNGEEFINEVASIS 343
S D K+ F +K+GQG G VY ++ GQ VA++ + + E INE+ +
Sbjct: 14 SVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 72
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+ NIV +L + ++ E + GSL + ++ + + + L
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQAL 129
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
E+LH +++H DIK NILL D K++DFG Q ++S S + GT ++A
Sbjct: 130 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM--VGTPYWMA 184
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
PEV +R+ G K D++S G+M IEM+
Sbjct: 185 PEVVTRKAYG--PKVDIWSLGIMAIEMI 210
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 138
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 199 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 248
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 249 --IDVYMIMVKCWMIDAD--SRPKFRELI 273
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 129
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 190 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 239
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 240 --IDVYMIMVKCWMIDAD--SRPKFRELI 264
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+T LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGE----LP--DGQLVAVKVLKN-SRCNGEEFINEVASI 342
+KR + +LG+G +G+V+ E LP D LVAVK LK S ++F E +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHN---DRNI----------KLEW 389
+ H +IV F G C E + +++E M +G L++F+ + D + L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE-- 447
+ +A +A G+ YL + VH D+ +N L+ + KI DFG+++ +
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 191
Query: 448 --SAISMLHARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEM 490
+ML R ++ PE + R+F + +SDV+S+G+++ E+
Sbjct: 192 RVGGRTMLPIR----WMPPESILYRKF---TTESDVWSFGVVLWEI 230
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELP-DGQL---VAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
+G G GEV G L GQ VA+K LK + +F++E + + + H NI+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 355 GFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
G + ++ E M NGSLD F+ H+ + ++ M + G+ G+ YL +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL---SDL 170
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK-ESAISMLHARGTIGYIAPEVYSRRF 471
VH D+ +N+L+D + K+SDFGL++ + ++A + + I + APE + F
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA--F 228
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
S SDV+S+G+++ E++
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGE----LP--DGQLVAVKVLKN-SRCNGEEFINEVASI 342
+KR + +LG+G +G+V+ E LP D LVAVK LK S ++F E +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHN---DRNI----------KLEW 389
+ H +IV F G C E + +++E M +G L++F+ + D + L
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE-- 447
+ +A +A G+ YL + VH D+ +N L+ + KI DFG+++ +
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 185
Query: 448 --SAISMLHARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEM 490
+ML R ++ PE + R+F + +SDV+S+G+++ E+
Sbjct: 186 RVGGRTMLPIR----WMPPESILYRKF---TTESDVWSFGVVLWEI 224
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 33/288 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYEN 360
+G+G +G V K + + VA+K ++ S + FI E+ +SR +H NIV G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 361 KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIA--IGIARGLEYLHRGCQVRIVHFD 418
L+ E GSL +H + + + ++ + ++G+ YLH ++H D
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPY-YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 419 IKPQNILLDED-FCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
+KP N+LL KI DFG A Q M + +G+ ++APEV+ S K
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEG--SNYSEK 183
Query: 478 SDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKM 537
DV+S+G+++ E++ K D+ ++ P + K I +
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-------LIKNLPKPIESL 236
Query: 538 MILVGFWCIQTNPSERPSMHKVLEML-------EGSIENLQIPPKPSL 578
M C +PS+RPSM ++++++ G+ E LQ P + SL
Sbjct: 237 MTR----CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSL 280
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPD---GQL---VAVKVLKNSRCNGE--EFINEVA 340
+V R + +LGQG +G VY+G D G+ VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 341 SISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE-----------W 389
+ + ++V LG + + ++ ELM +G L ++ R+++ E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTL 129
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA 449
+ M Q+A IA G+ YL+ + VH ++ +N ++ DF KI DFG+ + + +
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 450 ISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHN 509
+ ++APE S + G + SD++S+G+++ E+ + +++ +
Sbjct: 187 RKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK- 243
Query: 510 LIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSI 567
F DG ++ + + + C Q NP+ RP+ +++ +L+ +
Sbjct: 244 -----------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKGELPD---GQL---VAVKVLKNSRCNGE--EFINEVA 340
+V R + +LGQG +G VY+G D G+ VAVK + S E EF+NE +
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 341 SISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE-----------W 389
+ + ++V LG + + ++ ELM +G L ++ R+++ E
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTL 130
Query: 390 KTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA 449
+ M Q+A IA G+ YL+ + VH ++ +N ++ DF KI DFG+ + + +
Sbjct: 131 QEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 187
Query: 450 ISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHN 509
+ ++APE S + G + SD++S+G+++ E+ + +++ +
Sbjct: 188 RKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK- 244
Query: 510 LIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSI 567
F DG ++ + + + C Q NP+ RP+ +++ +L+ +
Sbjct: 245 -----------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 48/289 (16%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQ----------IAIGIA 400
LG C + +I E G+L ++ + RN + +K +Y+ + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 401 RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIG 460
+G+E+L + +H D+ +NILL E KI DFGLA+ K + AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 461 YIAPEVYSRRFGGVSHKSDVYSYGMMIIEM--VGCTK----NLDDEVTDTSICHNLIYER 514
++APE R + +SDV+S+G+++ E+ +G + +D+E R
Sbjct: 212 WMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFX----------RR 259
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 260 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 63/310 (20%)
Query: 287 YSDVKRMTKSFRD--KLGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEVASIS 343
Y+ KR F++ +G GG+G+V+K + DG+ ++ +K N E+ EV +++
Sbjct: 4 YTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK---YNNEKAEREVKALA 60
Query: 344 RTSHVNIVTF----LGFCY----------------ENKKNA---------LIYELMPNGS 374
+ HVNIV + GF Y EN KN+ + E G+
Sbjct: 61 KLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 375 LDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKI 434
L+++I R KL+ ++ I +G++Y+H +++H D+KP NI L + KI
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKI 177
Query: 435 SDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMVGC 493
DFGL + + ++GT+ Y++PE + S+ +G + D+Y+ G+++ E++
Sbjct: 178 GDFGLVTSLK---NDGKRTRSKGTLRYMSPEQISSQDYG---KEVDLYALGLILAELL-- 229
Query: 494 TKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSER 553
V DT+ + + + DG+ ++ K K ++ + P +R
Sbjct: 230 ------HVCDTAFETSKFFTDLR-------DGIISDIFDKKEKTLLQK---LLSKKPEDR 273
Query: 554 PSMHKVLEML 563
P+ ++L L
Sbjct: 274 PNTSEILRTL 283
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 284 RYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQ-LVAVKVLKNSRCNGEE--FINEVA 340
R+ ++ R FRD LG G + EV E Q LVA+K + G+E NE+A
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 341 SISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSL-----DKFIHNDRNIKLEWKTMYQ 394
+ + H NIV L YE+ + LI +L+ G L +K + +R+ + ++Q
Sbjct: 69 VLHKIKHPNIVA-LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQ 124
Query: 395 IAIGIARGLEYLHRGCQVRIVHFDIKPQNIL---LDEDFCPKISDFGLAKQAQKKESAIS 451
+ + +YLH + IVH D+KP+N+L LDED ISDFGL+K + S +S
Sbjct: 125 VLDAV----KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLS 176
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMM 486
A GT GY+APEV +++ S D +S G++
Sbjct: 177 T--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL +++ + +++ + Q I +G+EYL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 133
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 134 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 192 LTESKFSVA--SDVWSFGVVLYEL 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 286 SYSDVKRMTKSFRDKL-----------GQGGYGEVYKG--ELPDGQ--LVAVKVLKNSRC 330
+Y D R F +L G G +GEV G +LP + VA+K LK
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 331 NGE--EFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFI--HNDRNIK 386
+ +F+ E + + + H N+V G K ++ E M NG+LD F+ H+ +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 387 LEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK 446
++ M + GIA G+ YL + VH D+ +NIL++ + K+SDFGL++ +
Sbjct: 145 IQLVGMLR---GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 447 ESAI-SMLHARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMV 491
A+ + + + + APE + R+F + SDV+SYG+++ E++
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKF---TSASDVWSYGIVMWEVM 242
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 284 RYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQ-LVAVKVLKNSRCNGEE--FINEVA 340
R+ ++ R FRD LG G + EV E Q LVA+K + G+E NE+A
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 341 SISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSL-----DKFIHNDRNIKLEWKTMYQ 394
+ + H NIV L YE+ + LI +L+ G L +K + +R+ + ++Q
Sbjct: 69 VLHKIKHPNIVA-LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQ 124
Query: 395 IAIGIARGLEYLHRGCQVRIVHFDIKPQNIL---LDEDFCPKISDFGLAKQAQKKESAIS 451
+ ++YLH + IVH D+KP+N+L LDED ISDFGL+K + S +S
Sbjct: 125 VL----DAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLS 176
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMM 486
A GT GY+APEV +++ S D +S G++
Sbjct: 177 T--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 33/288 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYEN 360
+G+G +G V K + + VA+K ++ S + FI E+ +SR +H NIV G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 361 KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIA--IGIARGLEYLHRGCQVRIVHFD 418
L+ E GSL +H + + + ++ + ++G+ YLH ++H D
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPY-YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 419 IKPQNILL-DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
+KP N+LL KI DFG A Q M + +G+ ++APEV+ S K
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEG--SNYSEK 184
Query: 478 SDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKM 537
DV+S+G+++ E++ K D+ ++ P + K I +
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-------LIKNLPKPIESL 237
Query: 538 MILVGFWCIQTNPSERPSMHKVLEML-------EGSIENLQIPPKPSL 578
M C +PS+RPSM ++++++ G+ E LQ P + SL
Sbjct: 238 MTR----CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSL 281
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 284 RYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQ-LVAVKVLKNSRCNGEE--FINEVA 340
R+ ++ R FRD LG G + EV E Q LVA+K + G+E NE+A
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 341 SISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSL-----DKFIHNDRNIKLEWKTMYQ 394
+ + H NIV L YE+ + LI +L+ G L +K + +R+ + ++Q
Sbjct: 69 VLHKIKHPNIVA-LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQ 124
Query: 395 IAIGIARGLEYLHRGCQVRIVHFDIKPQNIL---LDEDFCPKISDFGLAKQAQKKESAIS 451
+ + +YLH + IVH D+KP+N+L LDED ISDFGL+K + S +S
Sbjct: 125 VLDAV----KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLS 176
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMM 486
A GT GY+APEV +++ S D +S G++
Sbjct: 177 T--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 43/286 (15%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYE 359
LGQG +G+V K D + A+K ++++ ++EV ++ +H +V + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 360 -----------NKKNALIYELM--PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
KK+ L ++ NG+L IH++ N+ + +++ I L Y+
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYI 132
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK------------ESAISMLH 454
H I+H D+KP NI +DE KI DFGLAK + S+ ++
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 455 ARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYER 514
A GT Y+A EV G + K D+YS G++ EM+ + V +I L
Sbjct: 190 AIGTAMYVATEVLDGT-GHYNEKIDMYSLGIIFFEMIYPFSTGMERV---NILKKLRSVS 245
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
IE D FD + EKKI +++ I +P++RP +L
Sbjct: 246 IEFPPD--FDDNKMKVEKKIIRLL-------IDHDPNKRPGARTLL 282
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVL------KNSRCNGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V + V S +E ++E ++ + ++
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 169
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 230 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 279
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 280 --IDVYMIMVKCWMIDAD--SRPKFRELI 304
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 299 DKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFC 357
+KLG+G YG VYK GQ+VA+K + + +E I E++ + + ++V + G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
++N ++ E GS+ I RN L + I +GLEYLH +R +H
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHR 149
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQ----AQKKESAISMLHARGTIGYIAPEVYSRRFGG 473
DIK NILL+ + K++DFG+A Q K+ I GT ++APEV G
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI------GTPFWMAPEVIQEI--G 201
Query: 474 VSHKSDVYSYGMMIIEM 490
+ +D++S G+ IEM
Sbjct: 202 YNCVADIWSLGITAIEM 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 111/216 (51%), Gaps = 30/216 (13%)
Query: 284 RYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQ-LVAVKVLKNSRCNGEE--FINEVA 340
R+ ++ R FRD LG G + EV E Q LVA+K + G+E NE+A
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 341 SISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSL-----DKFIHNDRNIKLEWKTMYQ 394
+ + H NIV L YE+ + LI +L+ G L +K + +R+ + ++Q
Sbjct: 69 VLHKIKHPNIVA-LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQ 124
Query: 395 IAIGIARGLEYLHRGCQVRIVHFDIKPQNIL---LDEDFCPKISDFGLAKQAQKKESAIS 451
+ + +YLH + IVH D+KP+N+L LDED ISDFGL+K E S
Sbjct: 125 VLDAV----KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGS 173
Query: 452 MLH-ARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMM 486
+L A GT GY+APEV +++ S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL-------PDG-QLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E P+ VAVK+LK+ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ LE+ K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
A +ARG+EYL + +H D+ +N+L+ ED KI+DFGLA+ + +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 245
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 21/219 (9%)
Query: 276 NHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEE 334
N ES + + D+K++ + F++ LG G + EV E G+L AVK + G+E
Sbjct: 6 NGESSSSWKKQAEDIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE 64
Query: 335 --FINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSL-DKFIHNDRNIKLEWK 390
NE+A + + H NIV L YE+ + L+ +L+ G L D+ + + +
Sbjct: 65 SSIENEIAVLRKIKHENIVA-LEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS 123
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKE 447
T+ + + + YLHR + IVH D+KP+N+L DE+ ISDFGL+K K +
Sbjct: 124 TLIR---QVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 448 SAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMM 486
M A GT GY+APEV +++ S D +S G++
Sbjct: 178 ---VMSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 39/283 (13%)
Query: 301 LGQGGYGEVYKGELPDGQL----VAVKVLK--NSRCNGEEFINEVASISRTSHVNIVTFL 354
+G+G +G VY GE D A+K L E F+ E + +H N++ +
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 355 GFCYENKKNALIYELMP---NGSLDKFIHN-DRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
G L + L+P +G L +FI + RN + K + + +ARG+EYL
Sbjct: 89 GIML--PPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYL---A 141
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE--SAISMLHARGTIGYIAPE-VY 467
+ + VH D+ +N +LDE F K++DFGLA+ +E S HAR + + A E +
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
+ RF + KSDV+S+G+++ E++ + + H L R P ++ D +
Sbjct: 202 TYRF---TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLY 258
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENL 570
++ C + +P+ RP+ +L G +E +
Sbjct: 259 QVMQQ------------CWEADPAVRPT----FRVLVGEVEQI 285
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 129
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 130 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 188 LTESKFSVA--SDVWSFGVVLYEL 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA G+ YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAEGMNYLE---D 132
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 193 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 242
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 243 --IDVYMIMVKCWMIDAD--SRPKFRELI 267
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 134
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 135 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 193 LTESKFSVA--SDVWSFGVVLYEL 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 128
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 129 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 187 LTESKFSVA--SDVWSFGVVLYEL 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 135
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+H+SDV+SYG+ + E++
Sbjct: 196 --YTHQSDVWSYGVTVWELM 213
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 145
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+H+SDV+SYG+ + E++
Sbjct: 206 --YTHQSDVWSYGVTVWELM 223
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 130
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 131 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 189 LTESKFSVA--SDVWSFGVVLYEL 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 161
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 162 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 220 LTESKFSVA--SDVWSFGVVLYEL 241
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 133
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 134 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 192 LTESKFSVA--SDVWSFGVVLYEL 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 138
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+H+SDV+SYG+ + E++
Sbjct: 199 --YTHQSDVWSYGVTVWELM 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 135
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 136 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 194 LTESKFSVA--SDVWSFGVVLYEL 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 28/272 (10%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVKV-----LKNSRCNGEEFINEVASISRTSHVNIVTF 353
K+G+G + EVY+ L DG VA+K L +++ + I E+ + + +H N++ +
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKY 97
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIK--LEWKTMYQIAIGIARGLEYLHRGCQ 411
E+ + ++ EL G L + I + + K + +T+++ + + LE++H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-- 155
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R++H DIKP N+ + K+ D GL + K +A L GT Y++PE
Sbjct: 156 -RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL--VGTPYYMSPERIHE-- 210
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNL-DDEVTDTSICHNLIYERIEPGNDFQFDGVATEE 530
G + KSD++S G ++ EM D++ S+C + P + +EE
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHY----SEE 266
Query: 531 EKKIAKMMILVGFWCIQTNPSERPSMHKVLEM 562
+++ M CI +P +RP + V ++
Sbjct: 267 LRQLVNM-------CINPDPEKRPDVTYVYDV 291
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 136
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 137 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 195 LTESKFSVA--SDVWSFGVVLYEL 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 130
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 131 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 189 LTESKFSVA--SDVWSFGVVLYEL 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 137
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 138 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 196 LTESKFSVA--SDVWSFGVVLYEL 217
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT---MYQ----------IAI 397
LG C + +I E G+L ++ + RN + +KT +Y+ +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 398 GIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR 456
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + AR
Sbjct: 156 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 457 GTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYERI 515
+ ++APE R + +SDV+S+G+++ E+ + V D C R+
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RRL 264
Query: 516 EPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
+ G + T E M C PS+RP+ +++E L
Sbjct: 265 KEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLE--------------WKTMYQI 395
I+ LG C ++ +I E G+L +++ R +E +K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 30/228 (13%)
Query: 276 NHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDG----QLVAVKVLKNSRCN 331
HE P ++ V LGQG +G+V+ + G QL A+KVLK +
Sbjct: 17 GHEKADPSQFELLKV----------LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK 66
Query: 332 GEEFIN---EVASISRTSHVNIVTFLGFCYENK-KNALIYELMPNGSLDKFIHNDRNIKL 387
+ + E + +H IV L + ++ + K LI + + G L F + +
Sbjct: 67 VRDRVRTKMERDILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMF 123
Query: 388 EWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE 447
+ + +A L++LH + I++ D+KP+NILLDE+ K++DFGL+K++ E
Sbjct: 124 TEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180
Query: 448 -SAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCT 494
A S GT+ Y+APEV +RR G + +D +S+G+++ EM+ T
Sbjct: 181 KKAYSFC---GTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTGT 223
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 148
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 149 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 207 LTESKFSVA--SDVWSFGVVLYEL 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 137/281 (48%), Gaps = 48/281 (17%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTF----LG 355
+G GG+G+V+K + DG+ V+K + N E+ EV ++++ HVNIV + G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTY---VIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDG 75
Query: 356 FCYE---NKKNA---------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
F Y+ + KN+ + E G+L+++I R KL+ ++ I +G+
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
+Y+H ++++ D+KP NI L + KI DFGL + + ++GT+ Y++
Sbjct: 136 DYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK---NDGKRXRSKGTLRYMS 189
Query: 464 PE-VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQ 522
PE + S+ +G + D+Y+ G+++ E++ V DT+ + + +
Sbjct: 190 PEQISSQDYG---KEVDLYALGLILAELL--------HVCDTAFETSKFFTDLR------ 232
Query: 523 FDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
DG+ ++ K K ++ + P +RP+ ++L L
Sbjct: 233 -DGIISDIFDKKEKTLLQK---LLSKKPEDRPNTSEILRTL 269
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 148
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 149 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 207 LTESKFSVA--SDVWSFGVVLYEL 228
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVL--KNSRCNGEEFINEVASISRTSHVNIVTFLGFC 357
LG+G YG VY G +L + +A+K + ++SR + + E+A H NIV +LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRN-IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
EN + E +P GSL + + +K +T+ I GL+YLH +IVH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145
Query: 417 FDIKPQNILLDE-DFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
DIK N+L++ KISDFG +K+ GT+ Y+APE+ + G
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPRGYG 203
Query: 476 HKSDVYSYGMMIIEMV 491
+D++S G IIEM
Sbjct: 204 KAADIWSLGCTIIEMA 219
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 21/228 (9%)
Query: 278 ESLAPKRYSYSDVKRMTKSFRDK-------LGQGGYGEVYKGE-LPDGQLVAVKVL---- 325
ES+ P S K + + F++ LG G +G V+KG +P+G+ + + V
Sbjct: 9 ESIEPLDPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI 68
Query: 326 --KNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR 383
K+ R + + + + +I H +IV LG C L+ + +P GSL + R
Sbjct: 69 EDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHR 127
Query: 384 NIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQA 443
L + + + IA+G+ YL +VH ++ +N+LL +++DFG+A
Sbjct: 128 G-ALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL 183
Query: 444 QKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ + A+ I ++A E S FG +H+SDV+SYG+ + E++
Sbjct: 184 PPDDKQLLYSEAKTPIKWMALE--SIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 139/265 (52%), Gaps = 21/265 (7%)
Query: 294 TKSFRDKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRC-NGEEFINEVASISRTSHVNIV 351
T S + LG G +G+V+K E G +A K++K + EE NE++ +++ H N++
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 352 TFLGFCYENKKN-ALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+E+K + L+ E + G L D+ I N+ E T+ + I G+ ++H
Sbjct: 150 QLYD-AFESKNDIVLVMEYVDGGELFDRIIDESYNLT-ELDTILFMK-QICEGIRHMH-- 204
Query: 410 CQVRIVHFDIKPQNIL-LDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
Q+ I+H D+KP+NIL ++ D KI DFGLA++ + +E GT ++APEV
Sbjct: 205 -QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVV 260
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV-GCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGV 526
+ F VS +D++S G++ ++ G + L D D +N++ R + D +F +
Sbjct: 261 NYDF--VSFPTDMWSVGVIAYMLLSGLSPFLGD--NDAETLNNILACRWDL-EDEEFQDI 315
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPS 551
+ E ++ I+K++I W I + +
Sbjct: 316 SEEAKEFISKLLIKEKSWRISASEA 340
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 286 SYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLK-NSRCNGEEFINEVASIS 343
S D K+ F +K+GQG G VY ++ GQ VA++ + + E INE+ +
Sbjct: 15 SVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 73
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+ NIV +L + ++ E + GSL + ++ + + + L
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQAL 130
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
E+LH +++H +IK NILL D K++DFG Q ++S S + GT ++A
Sbjct: 131 EFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTPYWMA 185
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
PEV +R+ G K D++S G+M IEM+
Sbjct: 186 PEVVTRKAYG--PKVDIWSLGIMAIEMI 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
L G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 142
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 203 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 252
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 253 --IDVYMIMVKCWMIDAD--SRPKFRELI 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 298 RDKLGQGGYGEVYKG-ELPDGQLVAVKVL--KNSRCNGEEFINEVASISRTSHVNIVTFL 354
R LG+G YG VY G +L + +A+K + ++SR + + E+A H NIV +L
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYL 71
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRN-IKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
G EN + E +P GSL + + +K +T+ I GL+YLH +
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 414 IVHFDIKPQNILLDE-DFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
IVH DIK N+L++ KISDFG +K+ GT+ Y+APE+ +
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPR 186
Query: 473 GVSHKSDVYSYGMMIIEMV 491
G +D++S G IIEM
Sbjct: 187 GYGKAADIWSLGCTIIEMA 205
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNS---RCNGEEFINEVASISRT-SHVNIVTFLG 355
LG+GG+ + ++ D + V A K++ S + + E ++ SI R+ +H ++V F G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
F +N ++ EL SL + +H R E + Y + I G +YLHR R++
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RVI 161
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+K N+ L+ED KI DFGLA + + +L GT YIAPEV S++ G S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSKK--GHS 217
Query: 476 HKSDVYSYG-MMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G +M +VG +TS C Y RI+ N++ +
Sbjct: 218 FEVDVWSIGCIMYTLLVG------KPPFETS-CLKETYLRIK-KNEYSIPKHINPVAASL 269
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVL 560
+ M +QT+P+ RP+++++L
Sbjct: 270 IQKM-------LQTDPTARPTINELL 288
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 139
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFG AK +E + I ++A E R
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 200 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 249
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 250 --IDVYMIMVKCWMIDAD--SRPKFRELI 274
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
L G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 142
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 203 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 252
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 253 --IDVYMIMVKCWMIDAD--SRPKFRELI 277
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 137
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFG AK +E + I ++A E R
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 198 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 247
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 248 --IDVYMIMVKCWMIDAD--SRPKFRELI 272
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 29/272 (10%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLG 355
+LG+G YG V K +P GQ++AVK ++ NS+ ++ S+ VTF G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 356 FCYENKKNALIYELMPNGSLDKFIHN--DRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+ + ELM + SLDKF D+ + + +IA+ I + LE+LH ++
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLS 174
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG- 472
++H D+KP N+L++ K+ DFG++ +S + A G Y+APE +
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSVAKTIDA-GCKPYMAPERINPELNQ 231
Query: 473 -GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
G S KSD++S G+ +IE+ D T ++ EP D + E
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE---EPSPQLPADKFSAE-- 286
Query: 532 KKIAKMMILVGF--WCIQTNPSERPSMHKVLE 561
V F C++ N ERP+ ++++
Sbjct: 287 --------FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
L G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 135
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFGLAK +E + I ++A E R
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 196 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 245
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 246 --IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 30/228 (13%)
Query: 276 NHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDG----QLVAVKVLKNSRCN 331
HE P ++ V LGQG +G+V+ + G QL A+KVLK +
Sbjct: 17 GHEKADPSQFELLKV----------LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK 66
Query: 332 GEEFIN---EVASISRTSHVNIVTFLGFCYENK-KNALIYELMPNGSLDKFIHNDRNIKL 387
+ + E + +H IV L + ++ + K LI + + G L F + +
Sbjct: 67 VRDRVRTKMERDILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMF 123
Query: 388 EWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE 447
+ + +A L++LH + I++ D+KP+NILLDE+ K++DFGL+K++ E
Sbjct: 124 TEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180
Query: 448 -SAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCT 494
A S GT+ Y+APEV +RR G + +D +S+G+++ EM+ T
Sbjct: 181 KKAYSFC---GTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTGT 223
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 289 DVKRMTKSFR--DKLGQGGYGEVYKGELPD-GQLVAVKVLK-NSRCNGEEFIN-----EV 339
DVK K + D LG+G + VYK + Q+VA+K +K R ++ IN E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGI 399
+ SH NI+ L +L+++ M + I D ++ L + +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDL--EVIIKDNSLVLTPSHIKAYMLMT 121
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
+GLEYLH Q I+H D+KP N+LLDE+ K++DFGLAK A H T
Sbjct: 122 LQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYX--HQVVTR 176
Query: 460 GYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMV 491
Y APE ++ R GV D+++ G ++ E++
Sbjct: 177 WYRAPELLFGARMYGVG--VDMWAVGCILAELL 207
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 30/228 (13%)
Query: 276 NHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDG----QLVAVKVLKNSRCN 331
HE P ++ V LGQG +G+V+ + G QL A+KVLK +
Sbjct: 18 GHEKADPSQFELLKV----------LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK 67
Query: 332 GEEFIN---EVASISRTSHVNIVTFLGFCYENK-KNALIYELMPNGSLDKFIHNDRNIKL 387
+ + E + +H IV L + ++ + K LI + + G L F + +
Sbjct: 68 VRDRVRTKMERDILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMF 124
Query: 388 EWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE 447
+ + +A L++LH + I++ D+KP+NILLDE+ K++DFGL+K++ E
Sbjct: 125 TEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 181
Query: 448 -SAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCT 494
A S GT+ Y+APEV +RR G + +D +S+G+++ EM+ T
Sbjct: 182 KKAYSFC---GTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTGT 224
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNS---RCNGEEFINEVASISRT-SHVNIVTFLG 355
LG+GG+ + ++ D + V A K++ S + + E ++ SI R+ +H ++V F G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
F +N ++ EL SL + +H R E + Y + I G +YLHR R++
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RVI 163
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+K N+ L+ED KI DFGLA + + +L GT YIAPEV S++ G S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSKK--GHS 219
Query: 476 HKSDVYSYG-MMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G +M +VG +TS C Y RI+ N++ +
Sbjct: 220 FEVDVWSIGCIMYTLLVG------KPPFETS-CLKETYLRIK-KNEYSIPKHINPVAASL 271
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVL 560
+ M +QT+P+ RP+++++L
Sbjct: 272 IQKM-------LQTDPTARPTINELL 290
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNS---RCNGEEFINEVASISRT-SHVNIVTFLG 355
LG+GG+ + ++ D + V A K++ S + + E ++ SI R+ +H ++V F G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
F +N ++ EL SL + +H R E + Y + I G +YLHR R++
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RVI 137
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+K N+ L+ED KI DFGLA + + +L GT YIAPEV S++ G S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSKK--GHS 193
Query: 476 HKSDVYSYG-MMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G +M +VG +TS C Y RI+ N++ +
Sbjct: 194 FEVDVWSIGCIMYTLLVG------KPPFETS-CLKETYLRIK-KNEYSIPKHINPVAASL 245
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVL 560
+ M +QT+P+ RP+++++L
Sbjct: 246 IQKM-------LQTDPTARPTINELL 264
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 135
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFG AK +E + I ++A E R
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 196 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 245
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 246 --IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNS---RCNGEEFINEVASISRT-SHVNIVTFLG 355
LG+GG+ + ++ D + V A K++ S + + E ++ SI R+ +H ++V F G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
F +N ++ EL SL + +H R E + Y + I G +YLHR R++
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RVI 143
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+K N+ L+ED KI DFGLA + + L GT YIAPEV S++ G S
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKK--GHS 199
Query: 476 HKSDVYSYG-MMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G +M +VG +TS C Y RI+ N++ +
Sbjct: 200 FEVDVWSIGCIMYTLLVG------KPPFETS-CLKETYLRIK-KNEYSIPKHINPVAASL 251
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVL 560
+ M +QT+P+ RP+++++L
Sbjct: 252 IQKM-------LQTDPTARPTINELL 270
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 142
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFG AK +E + I ++A E R
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 472 GGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEE 531
+H+SDV+SYG+ + E++ D + + I L E G + T
Sbjct: 203 --YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICT--- 252
Query: 532 KKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I MI+V W I + RP +++
Sbjct: 253 --IDVYMIMVKCWMIDAD--SRPKFRELI 277
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNS---RCNGEEFINEVASISRT-SHVNIVTFLG 355
LG+GG+ + ++ D + V A K++ S + + E ++ SI R+ +H ++V F G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
F +N ++ EL SL + +H R E + Y + I G +YLHR R++
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RVI 139
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+K N+ L+ED KI DFGLA + + L GT YIAPEV S++ G S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKK--GHS 195
Query: 476 HKSDVYSYG-MMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G +M +VG +TS C Y RI+ N++ +
Sbjct: 196 FEVDVWSIGCIMYTLLVG------KPPFETS-CLKETYLRIK-KNEYSIPKHINPVAASL 247
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVL 560
+ M +QT+P+ RP+++++L
Sbjct: 248 IQKM-------LQTDPTARPTINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNS---RCNGEEFINEVASISRT-SHVNIVTFLG 355
LG+GG+ + ++ D + V A K++ S + + E ++ SI R+ +H ++V F G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
F +N ++ EL SL + +H R E + Y + I G +YLHR R++
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RVI 139
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H D+K N+ L+ED KI DFGLA + + L GT YIAPEV S++ G S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKK--GHS 195
Query: 476 HKSDVYSYG-MMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G +M +VG +TS C Y RI+ N++ +
Sbjct: 196 FEVDVWSIGCIMYTLLVG------KPPFETS-CLKETYLRIK-KNEYSIPKHINPVAASL 247
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVL 560
+ M +QT+P+ RP+++++L
Sbjct: 248 IQKM-------LQTDPTARPTINELL 266
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 299 DKLGQGGYGEVYKGE--LPDGQLV--AVKVLKNSRCNGEE----FINEVASISRTSHVNI 350
+KLG G +G V +GE P G+ V AVK LK + E FI EV ++ H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 351 VTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ G ++ EL P GSL D+ + + L T+ + A+ +A G+ YL
Sbjct: 84 IRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLE-- 138
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPEVYS 468
R +H D+ +N+LL KI DFGL + Q + + H + + APE
Sbjct: 139 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
R SH SD + +G+ + EM
Sbjct: 198 TR--TFSHASDTWMFGVTLWEM 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 130
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H D+ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 131 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 189 LTESKFSVA--SDVWSFGVVLYEL 210
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 299 DKLGQGGYGEVYKGEL--PDGQLV--AVKVLKNSRCNGEE----FINEVASISRTSHVNI 350
+KLG G +G V +GE P G+ V AVK LK + E FI EV ++ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 351 VTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ G ++ EL P GSL D+ + + L T+ + A+ +A G+ YL
Sbjct: 74 IRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLE-- 128
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPEVYS 468
R +H D+ +N+LL KI DFGL + Q + + H + + APE
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
R SH SD + +G+ + EM
Sbjct: 188 TR--TFSHASDTWMFGVTLWEM 207
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 37/288 (12%)
Query: 301 LGQGGYGEVYKGELP--DGQ--LVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTF 353
LG+G +G V +G L DG VAVK +K +S+ EEF++E A + SH N++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 354 LGFCYENK-----KNALIYELMPNGSLDKFIHNDR------NIKLEWKTMYQIAIGIARG 402
LG C E K +I M G L ++ R +I L+ T+ + + IA G
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDIALG 159
Query: 403 LEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
+EYL +H D+ +N +L +D ++DFGL+K+ + A+ + +I
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQ 522
A E + R + KSDV+++G+ + E+ T+ + + ++ +Y D+
Sbjct: 217 AIESLADRV--YTSKSDVWAFGVTMWEI--ATRGM---TPYPGVQNHEMY-------DYL 262
Query: 523 FDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENL 570
G ++ + + + + C +T+P +RP+ + LE +E+L
Sbjct: 263 LHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT------------MYQIAIG 398
LG C + +I E G+L ++ + RN + +K + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGT 458
+A+G+E+L + +H D+ +NILL E KI DFGLA+ K + AR
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYERIEP 517
+ ++APE R + +SDV+S+G+++ E+ + V D C R++
Sbjct: 214 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----RLKE 266
Query: 518 GNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
G + T E M C PS+RP+ +++E L
Sbjct: 267 GTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 19/206 (9%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEY 405
IV + G CY + LI E +P GSL ++ H +R ++ + Q I +G+EY
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEY 132
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAP 464
L G + R +H D+ +NIL++ + KI DFGL K Q KE I + AP
Sbjct: 133 L--GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 465 EVYSRRFGGVSHKSDVYSYGMMIIEM 490
E + V+ SDV+S+G+++ E+
Sbjct: 190 ESLTESKFSVA--SDVWSFGVVLYEL 213
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ +I+DFGLA+ + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 299 DKLGQGGYGEVYKGEL--PDGQLV--AVKVLKNSRCNGEE----FINEVASISRTSHVNI 350
+KLG G +G V +GE P G+ V AVK LK + E FI EV ++ H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 351 VTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ G ++ EL P GSL D+ + + L T+ + A+ +A G+ YL
Sbjct: 78 IRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 134
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPEVYS 468
R +H D+ +N+LL KI DFGL + Q + + H + + APE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
R SH SD + +G+ + EM
Sbjct: 192 TR--TFSHASDTWMFGVTLWEM 211
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVL------KNSRCNGEEFINEVASISRTSHVNIVTF 353
LG G +G V+KG +P+G+ + + V K+ R + + + + +I H +IV
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
LG C L+ + +P GSL + R L + + + IA+G+ YL
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYLEEHG--- 135
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG 473
+VH ++ +N+LL +++DFG+A + + A+ I ++A E S FG
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE--SIHFGK 193
Query: 474 VSHKSDVYSYGMMIIEMV 491
+H+SDV+SYG+ + E++
Sbjct: 194 YTHQSDVWSYGVTVWELM 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + + A+KVL ++ + EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ +++ + LI E P G++ + + + Y +A L Y H +++
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKKVI 130
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A A GT+ Y+ PE+ R
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMH--D 184
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + DT Y+RI +F F TE + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDT-------YKRIS-RVEFTFPDFVTEGARDL 236
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 237 ISRL-------LKHNPSQRPMLREVLE 256
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 266 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 298
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 137
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFG AK +E + I ++A E R
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+H+SDV+SYG+ + E++
Sbjct: 198 --YTHQSDVWSYGVTVWELM 215
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 33/289 (11%)
Query: 284 RYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKN---SRCNGEEFINEVA 340
++S D K++ +F KL + GE++KG G + VKVLK S +F E
Sbjct: 3 KHSGIDFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 341 SISRTSHVNIVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIG 398
+ SH N++ LG C LI MP GSL +H N ++ + A+
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALD 119
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKIS--DFGLAKQAQKKESAISMLHAR 456
+ARG+ +LH + I + +++++DED +IS D + Q+ + A +
Sbjct: 120 MARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA----- 173
Query: 457 GTIGYIAPEVYSRRFGGVSHKS-DVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERI 515
++APE ++ + +S D++S+ +++ E+V D +++ I + E +
Sbjct: 174 ----WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD-LSNMEIGMKVALEGL 228
Query: 516 EPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
P + ++K+M + C+ +P++RP ++ +LE
Sbjct: 229 RP-------TIPPGISPHVSKLMKI----CMNEDPAKRPKFDMIVPILE 266
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 299 DKLGQGGYGEVYKGEL--PDGQLV--AVKVLKNSRCNGEE----FINEVASISRTSHVNI 350
+KLG G +G V +GE P G+ V AVK LK + E FI EV ++ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 351 VTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ G ++ EL P GSL D+ + + L T+ + A+ +A G+ YL
Sbjct: 74 IRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 130
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPEVYS 468
R +H D+ +N+LL KI DFGL + Q + + H + + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
R SH SD + +G+ + EM
Sbjct: 188 TR--TFSHASDTWMFGVTLWEM 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 212 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 244
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 301 LGQGGYGEVYKGE-LPDGQLV----AVKVLKNSRC--NGEEFINEVASISRTSHVNIVTF 353
LG G +G VYKG +P+G+ V A+K L+ + +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
LG C + LI +LMP G L ++ H D NI ++ + + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQY--LLNWCVQIAKGMNYLE---D 137
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
R+VH D+ +N+L+ KI+DFG AK +E + I ++A E R
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+H+SDV+SYG+ + E++
Sbjct: 198 --YTHQSDVWSYGVTVWELM 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 299 DKLGQGGYGEVYKGE--LPDGQLV--AVKVLKNSRCNGEE----FINEVASISRTSHVNI 350
+KLG G +G V +GE P G+ V AVK LK + E FI EV ++ H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 351 VTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ G ++ EL P GSL D+ + + L T+ + A+ +A G+ YL
Sbjct: 84 IRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLE-- 138
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPEVYS 468
R +H D+ +N+LL KI DFGL + Q + + H + + APE
Sbjct: 139 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
R SH SD + +G+ + EM
Sbjct: 198 TR--TFSHASDTWMFGVTLWEM 217
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 209 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 241
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I E G+L +++ R +E+ K +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 207 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 239
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 146 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 202 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RR 254
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 255 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 299 DKLGQGGYGEVYKGEL--PDGQLV--AVKVLKNSRCNGEE----FINEVASISRTSHVNI 350
+KLG G +G V +GE P G+ V AVK LK + E FI EV ++ H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 351 VTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ G ++ EL P GSL D+ + + L T+ + A+ +A G+ YL
Sbjct: 78 IRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLE-- 132
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPEVYS 468
R +H D+ +N+LL KI DFGL + Q + + H + + APE
Sbjct: 133 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
R SH SD + +G+ + EM
Sbjct: 192 TR--TFSHASDTWMFGVTLWEM 211
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 155 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 211 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----R 263
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 264 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 43/286 (15%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYE 359
LGQG +G+V K D + A+K ++++ ++EV ++ +H +V + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 360 -----------NKKNALIYELM--PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
KK+ L ++ N +L IH++ N+ + +++ I L Y+
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYI 132
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK------------ESAISMLH 454
H I+H D+KP NI +DE KI DFGLAK + S+ ++
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 455 ARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYER 514
A GT Y+A EV G + K D+YS G++ EM+ + V +I L
Sbjct: 190 AIGTAMYVATEVLDGT-GHYNEKIDMYSLGIIFFEMIYPFSTGMERV---NILKKLRSVS 245
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
IE D FD + EKKI +++ I +P++RP +L
Sbjct: 246 IEFPPD--FDDNKMKVEKKIIRLL-------IDHDPNKRPGARTLL 282
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 146 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 202 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RR 254
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 255 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 299 DKLGQGGYGEVYKGEL--PDGQLV--AVKVLKNSRCNGEE----FINEVASISRTSHVNI 350
+KLG G +G V +GE P G+ V AVK LK + E FI EV ++ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 351 VTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ G ++ EL P GSL D+ + + L T+ + A+ +A G+ YL
Sbjct: 74 IRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLE-- 128
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPEVYS 468
R +H D+ +N+LL KI DFGL + Q + + H + + APE
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
R SH SD + +G+ + EM
Sbjct: 188 TR--TFSHASDTWMFGVTLWEM 207
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 51 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 98
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 99 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 158
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 159 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 216 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 251
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 51 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 98
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 99 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 158
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 159 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 216 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 45 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 92
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 93 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 152
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 153 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 210 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 245
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 25 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 72
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 73 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 132
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 133 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 190 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 36 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 83
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 84 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 143
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 144 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 201 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 236
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 22 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 69
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 70 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 129
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 130 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 187 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 222
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 155 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 211 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----R 263
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 264 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E+
Sbjct: 18 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----REL 65
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 66 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 125
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 126 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 183 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 218
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 55 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 102
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 103 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 162
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 163 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 220 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 255
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 53 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 100
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 101 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 160
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 161 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 218 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 253
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E+
Sbjct: 21 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----REL 68
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 69 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 128
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 129 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 186 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----REL 64
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 30 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 77
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 78 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 137
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 138 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 195 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 230
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----REL 64
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 29 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 76
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 136
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 137 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 194 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 229
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A A GT+ Y+ PE+ R
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMH--D 187
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 239
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 240 ISRL-------LKHNPSQRPMLREVLE 259
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 296 SFRDKLGQGGYGEVYK---GELPD--GQLVAVKVLKNS-RCNGEEFINEVASISRTSHVN 349
F +LG+G +G V L D G++VAVK L++S + +F E+ + H N
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 350 IVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
IV + G CY + LI E +P GSL ++ + +++ + Q I +G+EYL
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL- 131
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK-QAQKKESAISMLHARGTIGYIAPEV 466
G + R +H ++ +NIL++ + KI DFGL K Q KE I + APE
Sbjct: 132 -GTK-RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEM 490
+ V+ SDV+S+G+++ E+
Sbjct: 190 LTESKFSVA--SDVWSFGVVLYEL 211
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 29 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 76
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 136
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 137 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 194 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 229
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----REL 64
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 182 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I G+L +++ R +E+ K +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 146 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 202 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RR 254
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 255 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVK-VLKNSRCNGEEFINEV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K VL++ R E +
Sbjct: 96 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 143
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 144 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 203
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 204 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 261 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 296
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFIN-EV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K + G+ F N E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNREL 64
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 182 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 300 KLGQGGYGEVYKGELP-DGQLVAVKVLKNSRCNGEE-----FINEVASISRTS---HVNI 350
++G G YG VYK P G VA+K ++ NGEE + EVA + R H N+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 351 VTFLGFCYENK-----KNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEY 405
V + C ++ K L++E + + L ++ L +T+ + RGL++
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
LH C IVH D+KP+NIL+ K++DFGLA+ + +++ T+ Y APE
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVVVTLWYRAPE 181
Query: 466 VYSRRFGGVSHKSDVYSYGMMIIEM 490
V + + D++S G + EM
Sbjct: 182 VLLQ--STYATPVDMWSVGCIFAEM 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 130
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A A GT+ Y+ PE+ R
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMH--D 184
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 236
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 237 ISRL-------LKHNPSQRPMLREVLE 256
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 155 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 211 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----R 263
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 264 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G + K + + Y +A L Y H R++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LXGTLDYLPPEMIEGRMH--D 189
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 241
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 242 ISRL-------LKHNPSQRPMLREVLE 261
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 146 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 202 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RR 254
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 255 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFIN-EV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K + G+ F N E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNREL 64
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + + R+ +T+ I +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 182 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G + K + + Y +A L Y H R++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 189
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 241
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 242 ISRL-------LKHNPSQRPMLREVLE 261
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 278 ESLAPKRYSYSDVKRMTKSFRDK-LGQGGYGEVYKGELP---DGQLVAVKVLKNSRCN-- 331
E + PK Y D K +T DK LG G +G V KG + VAVK+LKN +
Sbjct: 14 EEIRPKE-VYLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA 70
Query: 332 -GEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK 390
+E + E + + + IV +G C E + L+ E+ G L+K++ +R++K K
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--K 127
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI 450
+ ++ ++ G++YL + VH D+ +N+LL KISDFGL+K + E+
Sbjct: 128 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 451 -SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
+ H + + + APE + + S KSDV+S+G+++ E
Sbjct: 185 KAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 278 ESLAPKRYSYSDVKRMTKSFRDK-LGQGGYGEVYKGELP---DGQLVAVKVLKNSRCN-- 331
E + PK Y D K +T DK LG G +G V KG + VAVK+LKN +
Sbjct: 14 EEIRPKE-VYLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA 70
Query: 332 -GEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK 390
+E + E + + + IV +G C E + L+ E+ G L+K++ +R++K K
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--K 127
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI 450
+ ++ ++ G++YL + VH D+ +N+LL KISDFGL+K + E+
Sbjct: 128 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 451 -SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
+ H + + + APE + + S KSDV+S+G+++ E
Sbjct: 185 KAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 278 ESLAPKRYSYSDVKRMTKSFRDK-LGQGGYGEVYKG---ELPDGQLVAVKVLKNSRCN-- 331
E + PK Y D K +T DK LG G +G V KG + VAVK+LKN +
Sbjct: 12 EEIRPKE-VYLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA 68
Query: 332 -GEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK 390
+E + E + + + IV +G C E + L+ E+ G L+K++ +R++K K
Sbjct: 69 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--K 125
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI 450
+ ++ ++ G++YL + VH D+ +N+LL KISDFGL+K + E+
Sbjct: 126 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 451 -SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
+ H + + + APE + + S KSDV+S+G+++ E
Sbjct: 183 KAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWE 220
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 16/224 (7%)
Query: 280 LAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQL----VAVKVLKN--SRCNGE 333
L P+ + R LG+G +GEVY+G + + VAVK K + N E
Sbjct: 11 LVPRGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE 70
Query: 334 EFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMY 393
+F++E + H +IV +G E + +I EL P G L ++ ++N L+ T+
Sbjct: 71 KFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLV 128
Query: 394 QIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML 453
++ I + + YL + VH DI +NIL+ C K+ DFGL++ + ++ + +
Sbjct: 129 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 185
Query: 454 HARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKN 496
R I +++PE + RRF + SDV+ + + + E++ K
Sbjct: 186 -TRLPIKWMSPESINFRRF---TTASDVWMFAVCMWEILSFGKQ 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 278 ESLAPKRYSYSDVKRMTKSFRDK-LGQGGYGEVYKG---ELPDGQLVAVKVLKNSRCN-- 331
E + PK Y D K +T DK LG G +G V KG + VAVK+LKN +
Sbjct: 4 EEIRPKE-VYLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA 60
Query: 332 -GEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK 390
+E + E + + + IV +G C E + L+ E+ G L+K++ +R++K K
Sbjct: 61 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--K 117
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI 450
+ ++ ++ G++YL + VH D+ +N+LL KISDFGL+K + E+
Sbjct: 118 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 451 -SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
+ H + + + APE + + S KSDV+S+G+++ E
Sbjct: 175 KAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWE 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 34/268 (12%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 131
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQA-QKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
H DIKP+N+LL KI+DFG + A + + +S GT+ Y+ PE+ R
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-----GTLDYLPPEMIEGRMH-- 184
Query: 475 SHKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKK 533
K D++S G++ E +VG + +T Y+RI +F F TE +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARD 236
Query: 534 IAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ + ++ NPS+RP + +VLE
Sbjct: 237 LISRL-------LKHNPSQRPMLREVLE 257
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 28/200 (14%)
Query: 300 KLGQGGYGEVY--KGELPDGQLVAVKVLKN---SRCNGEEFINEVASISRTSHVNIVTFL 354
KLG G YGEV + ++ + A+K+++ S + + + EVA + H NI+
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVER-AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 355 GFCYENKKNA-LIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
F +E+K+N L+ E G L D+ IH +K I + G+ YLH+
Sbjct: 103 DF-FEDKRNYYLVMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH--- 155
Query: 413 RIVHFDIKPQNILL---DEDFCPKISDFGLAK--QAQKKESAISMLHARGTIGYIAPEVY 467
IVH D+KP+N+LL ++D KI DFGL+ + QKK M GT YIAPEV
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-----MKERLGTAYYIAPEVL 210
Query: 468 SRRFGGVSHKSDVYSYGMMI 487
+++ K DV+S G+++
Sbjct: 211 RKKY---DEKCDVWSIGVIL 227
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 30/215 (13%)
Query: 301 LGQGGYGEVYKGEL--------PDGQLVAVKVLKNSRCNGE--EFINEVASISRT-SHVN 349
LG+G +G+V E + VAVK+LK+ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 350 IVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW--------------KTMYQI 395
I+ LG C ++ +I G+L +++ R +E+ K +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+ARG+EYL + +H D+ +N+L+ E+ KI+DFGLA+ + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
R + ++APE R +H+SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 118/232 (50%), Gaps = 19/232 (8%)
Query: 266 DDRNVEAFIRNHESLAPKRYSYSDVKRMTKSFRDK-LGQGGYGEVYKG---ELPDGQLVA 321
D E+ + E + PK Y D K +T DK LG G +G V KG + VA
Sbjct: 344 DTEVFESPFADPEEIRPKEV-YLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVA 400
Query: 322 VKVLKNSRCN---GEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKF 378
VK+LKN + +E + E + + + IV +G C E + L+ E+ G L+K+
Sbjct: 401 VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY 459
Query: 379 IHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFG 438
+ +R++K K + ++ ++ G++YL + VH D+ +N+LL KISDFG
Sbjct: 460 LQQNRHVKD--KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFG 514
Query: 439 LAKQAQKKESAI-SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
L+K + E+ + H + + + APE + + S KSDV+S+G+++ E
Sbjct: 515 LSKALRADENYYKAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWE 564
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 157 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 213 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----R 265
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 266 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 300 KLGQGGYGEVYKGELP-DGQLVAVKVLKNSRCNGEE-----FINEVASISRTS---HVNI 350
++G G YG VYK P G VA+K ++ NGEE + EVA + R H N+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 351 VTFLGFCYENK-----KNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEY 405
V + C ++ K L++E + + L ++ L +T+ + RGL++
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
LH C IVH D+KP+NIL+ K++DFGLA+ + +++ T+ Y APE
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTLWYRAPE 181
Query: 466 VYSRRFGGVSHKSDVYSYGMMIIEM 490
V + + D++S G + EM
Sbjct: 182 VLLQ--STYATPVDMWSVGCIFAEM 204
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 301 LGQGGYGEVYKGELPDGQL----VAVKVLKN--SRCNGEEFINEVASISRTSHVNIVTFL 354
LG+G +GEVY+G + + VAVK K + N E+F++E + H +IV +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
G E + +I EL P G L ++ ++N L+ T+ ++ I + + YL +
Sbjct: 76 GII-EEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLE---SINC 130
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFGG 473
VH DI +NIL+ C K+ DFGL++ + ++ + + R I +++PE + RRF
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESINFRRF-- 187
Query: 474 VSHKSDVYSYGMMIIEMVGCTKN 496
+ SDV+ + + + E++ K
Sbjct: 188 -TTASDVWMFAVCMWEILSFGKQ 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 301 LGQGGYGEVYKGE------LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSH-VNIV 351
LG+G +G+V + + + VAVK+LK + E ++E+ + H +N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 352 TFLGFCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKT----MYQ----------IA 396
LG C + +I E G+L ++ + RN + +K +Y+ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 397 IGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + A
Sbjct: 192 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 456 RGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYER 514
R + ++APE R + +SDV+S+G+++ E+ + V D C R
Sbjct: 248 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----R 300
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
++ G + T E M C PS+RP+ +++E L
Sbjct: 301 LKEGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLG 355
+LG+G YG V K +P GQ++AVK ++ NS+ ++ S+ VTF G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 356 FCYENKKNALIYELMPNGSLDKFIHN--DRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+ + ELM + SLDKF D+ + + +IA+ I + LE+LH ++
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLS 130
Query: 414 IVHFDIKPQNILLDEDFCPKISDFG----LAKQAQKKESAISMLHARGTIGYIAPEVYSR 469
++H D+KP N+L++ K+ DFG L K A G Y+APE +
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA-------GCKPYMAPERINP 183
Query: 470 RFG--GVSHKSDVYSYGMMIIEM 490
G S KSD++S G+ +IE+
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 184
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 236
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 237 ISRL-------LKHNPSQRPMLREVLE 256
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 301 LGQGGYGEVYKGELPDGQL----VAVKVLKN--SRCNGEEFINEVASISRTSHVNIVTFL 354
LG+G +GEVY+G + + VAVK K + N E+F++E + H +IV +
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
G E + +I EL P G L ++ ++N L+ T+ ++ I + + YL +
Sbjct: 80 GII-EEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLE---SINC 134
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFGG 473
VH DI +NIL+ C K+ DFGL++ + ++ + + R I +++PE + RRF
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESINFRRF-- 191
Query: 474 VSHKSDVYSYGMMIIEMVGCTKN 496
+ SDV+ + + + E++ K
Sbjct: 192 -TTASDVWMFAVCMWEILSFGKQ 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 299 DKLGQGGYGEVYKG--ELPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVT 352
D LG G +G+V G EL G VAVK+L + + + E+ ++ H +I+
Sbjct: 22 DTLGVGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
++ E + G L +I +N +L+ K ++ I G++Y HR
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
+VH D+KP+N+LLD KI+DFGL+ E + + G+ Y APEV S R
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVISGRLY 192
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDT---SICHNLIY 512
+ D++S G+++ ++ T DD+ T IC + Y
Sbjct: 193 A-GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 33/222 (14%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFIN-EV 339
P+ SY+D K +G G +G VY+ +L D G+LVA+K + G+ F N E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNREL 64
Query: 340 ASISRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAI 397
+ + H NIV F Y + KK+ + L+ + R+ +T+ I +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYV 124
Query: 398 GIA-----RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAIS 451
+ R L Y+H I H DIKPQN+LLD D K+ DFG AKQ + E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMIIEMV 491
+ +R Y APE+ FG + S DV+S G ++ E++
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 187
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 239
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 240 ISRL-------LKHNPSQRPMLREVLE 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 189
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 241
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 242 ISRL-------LKHNPSQRPMLREVLE 261
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 299 DKLGQGGYGEVYKGE--LPDGQLVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVTFL 354
DKLG+G Y VYKG+ L D LVA+K ++ G I EV+ + H NIVT
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L +++ + NI + + + RGL Y HR ++
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDDCGNI-INMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAK 441
+H D+KPQN+L++E K++DFGLA+
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 287 YSDVKRMTKSFRDK-LGQGGYGEVYKG---ELPDGQLVAVKVLKNSRCN---GEEFINEV 339
Y D K +T DK LG G +G V KG + VAVK+LKN + +E + E
Sbjct: 6 YLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 63
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGI 399
+ + + IV +G C E + L+ E+ G L+K++ +R++K K + ++ +
Sbjct: 64 NVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQV 120
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI-SMLHARGT 458
+ G++YL + VH D+ +N+LL KISDFGL+K + E+ + H +
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
+ + APE + + S KSDV+S+G+++ E
Sbjct: 178 VKWYAPECIN--YYKFSSKSDVWSFGVLMWE 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 22/201 (10%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC---NGEEF-INE--VASISRTSHVNIVTF 353
+G+GG+GEVY D G++ A+K L R GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 354 LGFCYEN-KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+ + + K + I +LM G L H ++ M A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-- 312
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
+V+ D+KP NILLDE +ISD GLA KK+ S+ GT GY+APEV +
Sbjct: 313 -VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQK--- 364
Query: 473 GVSHKS--DVYSYGMMIIEMV 491
GV++ S D +S G M+ +++
Sbjct: 365 GVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 22/201 (10%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC---NGEEF-INE--VASISRTSHVNIVTF 353
+G+GG+GEVY D G++ A+K L R GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 354 LGFCYEN-KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+ + + K + I +LM G L H ++ M A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-- 312
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
+V+ D+KP NILLDE +ISD GLA KK+ S+ GT GY+APEV +
Sbjct: 313 -VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQK--- 364
Query: 473 GVSHKS--DVYSYGMMIIEMV 491
GV++ S D +S G M+ +++
Sbjct: 365 GVAYDSSADWFSLGCMLFKLL 385
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 22/201 (10%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC---NGEEF-INE--VASISRTSHVNIVTF 353
+G+GG+GEVY D G++ A+K L R GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 354 LGFCYEN-KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+ + + K + I +LM G L H ++ M A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-- 312
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
+V+ D+KP NILLDE +ISD GLA KK+ S+ GT GY+APEV +
Sbjct: 313 -VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQK--- 364
Query: 473 GVSHKS--DVYSYGMMIIEMV 491
GV++ S D +S G M+ +++
Sbjct: 365 GVAYDSSADWFSLGCMLFKLL 385
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 22/201 (10%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC---NGEEF-INE--VASISRTSHVNIVTF 353
+G+GG+GEVY D G++ A+K L R GE +NE + S+ T +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 354 LGFCYEN-KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+ + + K + I +LM G L H ++ M A I GLE++H
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-- 311
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
+V+ D+KP NILLDE +ISD GLA KK+ S+ GT GY+APEV +
Sbjct: 312 -VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQK--- 363
Query: 473 GVSHKS--DVYSYGMMIIEMV 491
GV++ S D +S G M+ +++
Sbjct: 364 GVAYDSSADWFSLGCMLFKLL 384
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 156
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 210
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 262
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 263 ISRL-------LKHNPSQRPMLREVLE 282
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 134
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 188
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 240
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 241 ISRL-------LKHNPSQRPMLREVLE 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 129
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 183
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 235
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 236 ISRL-------LKHNPSQRPMLREVLE 255
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 300 KLGQGGYGEVYKGELP-DGQLVAVKVLKNSRCNGEE-----FINEVASISRTS---HVNI 350
++G G YG VYK P G VA+K ++ NGEE + EVA + R H N+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 351 VTFLGFCYENK-----KNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEY 405
V + C ++ K L++E + + L ++ L +T+ + RGL++
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
LH C IVH D+KP+NIL+ K++DFGLA+ + +++ T+ Y APE
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYRAPE 181
Query: 466 VYSRRFGGVSHKSDVYSYGMMIIEM 490
V + + D++S G + EM
Sbjct: 182 VLLQ--STYATPVDMWSVGCIFAEM 204
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 118/232 (50%), Gaps = 19/232 (8%)
Query: 266 DDRNVEAFIRNHESLAPKRYSYSDVKRMTKSFRDK-LGQGGYGEVYKG---ELPDGQLVA 321
D E+ + E + PK Y D K +T DK LG G +G V KG + VA
Sbjct: 345 DTEVYESPYADPEEIRPKEV-YLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVA 401
Query: 322 VKVLKNSRCN---GEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKF 378
VK+LKN + +E + E + + + IV +G C E + L+ E+ G L+K+
Sbjct: 402 VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY 460
Query: 379 IHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFG 438
+ +R++K K + ++ ++ G++YL + VH D+ +N+LL KISDFG
Sbjct: 461 LQQNRHVKD--KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFG 515
Query: 439 LAKQAQKKESAI-SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
L+K + E+ + H + + + APE + + S KSDV+S+G+++ E
Sbjct: 516 LSKALRADENYYKAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWE 565
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 290 VKRMTKSFRDK------LGQGGYGEVY--KGELPDGQLVAVKVLKN----SRCNGEEFIN 337
V+ T F D+ LG+G +GEV K ++ GQ AVKV+ + + E +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 338 EVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIA 396
EV + + H NI+ F + L+ E+ G L D+ I R +++ +I
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 132
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISML 453
+ G+ Y+H+ +IVH D+KP+N+LL+ +D +I DFGL+ E++ M
Sbjct: 133 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMK 186
Query: 454 HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMI-IEMVGC 493
GT YIAPEV G K DV+S G+++ I + GC
Sbjct: 187 DKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGC 224
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 130
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEMIEGRMH--D 184
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 236
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 237 ISRL-------LKHNPSQRPMLREVLE 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 147
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 201
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 253
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 254 ISRL-------LKHNPSQRPMLREVLE 273
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 130
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----ELCGTLDYLPPEMIEGRMH--D 184
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 236
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 237 ISRL-------LKHNPSQRPMLREVLE 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 131
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMH--D 185
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 237
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 238 ISRL-------LKHNPSQRPMLREVLE 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 132
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH--D 186
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 238
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 239 ISRL-------LKHNPSQRPMLREVLE 258
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 187
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 239
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 240 ISRL-------LKHNPSQRPMLREVLE 259
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 287 YSDVKRMTKSFRDK-LGQGGYGEVYKGELP---DGQLVAVKVLKNSRCN---GEEFINEV 339
Y D K +T DK LG G +G V KG + VAVK+LKN + +E + E
Sbjct: 2 YLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 59
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGI 399
+ + + IV +G C E + L+ E+ G L+K++ +R++K K + ++ +
Sbjct: 60 NVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQV 116
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI-SMLHARGT 458
+ G++YL + VH D+ +N+LL KISDFGL+K + E+ + H +
Sbjct: 117 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
+ + APE + + S KSDV+S+G+++ E
Sbjct: 174 VKWYAPECIN--YYKFSSKSDVWSFGVLMWE 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 287 YSDVKRMTKSFRDK-LGQGGYGEVYKGELP---DGQLVAVKVLKNSRCN---GEEFINEV 339
Y D K +T DK LG G +G V KG + VAVK+LKN + +E + E
Sbjct: 6 YLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 63
Query: 340 ASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGI 399
+ + + IV +G C E + L+ E+ G L+K++ +R++K K + ++ +
Sbjct: 64 NVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQV 120
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI-SMLHARGT 458
+ G++YL + VH D+ +N+LL KISDFGL+K + E+ + H +
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
+ + APE + + S KSDV+S+G+++ E
Sbjct: 178 VKWYAPECIN--YYKFSSKSDVWSFGVLMWE 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 18 IGEGQFGDVHQGIYMSPENP-AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TXXKASKGKLPIKWMAPESINFRRF- 189
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 190 --TSASDVWMFGVCMWEIL 206
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 21/258 (8%)
Query: 315 PDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPN 372
P + VA+K + +C +E + E+ ++S+ H NIV++ + L+ +L+
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 373 GS-LDKFIH-----NDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILL 426
GS LD H ++ L+ T+ I + GLEYLH+ Q+ H D+K NILL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILL 149
Query: 427 DEDFCPKISDFG----LAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYS 482
ED +I+DFG LA + + GT ++APEV + G K+D++S
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPEVM-EQVRGYDFKADIWS 207
Query: 483 YGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVG 542
+G+ IE+ + L + Q + + K KM+ L
Sbjct: 208 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL-- 265
Query: 543 FWCIQTNPSERPSMHKVL 560
C+Q +P +RP+ ++L
Sbjct: 266 --CLQKDPEKRPTAAELL 281
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 188
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 290 VKRMTKSFRDK------LGQGGYGEVY--KGELPDGQLVAVKVLKN----SRCNGEEFIN 337
V+ T F D+ LG+G +GEV K ++ GQ AVKV+ + + E +
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 81
Query: 338 EVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIA 396
EV + + H NI+ F + L+ E+ G L D+ I R +++ +I
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 138
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISML 453
+ G+ Y+H+ +IVH D+KP+N+LL+ +D +I DFGL+ E++ M
Sbjct: 139 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMK 192
Query: 454 HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMI-IEMVGC 493
GT YIAPEV G K DV+S G+++ I + GC
Sbjct: 193 DKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGC 230
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 300 KLGQGGYGEV---YKGELPD--GQLVAVKVLKNSRCNGEEFINEVASISRTSHVN-IVTF 353
+LG+G +G V L D G LVAVK L++S + + I + H + IV +
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 354 LGFCYENKKNAL--IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
G Y + +L + E +P+G L F+ R +L+ + + I +G+EYL
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLG---S 132
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ-KKESAISMLHARGTIGYIAPEVYSRR 470
R VH D+ +NIL++ + KI+DFGLAK K+ + + I + APE S
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 471 FGGVSHKSDVYSYGMMIIEM 490
S +SDV+S+G+++ E+
Sbjct: 193 I--FSRQSDVWSFGVVLYEL 210
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGX 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 131
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMH--D 185
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 237
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 238 ISRL-------LKHNPSQRPMLREVLE 257
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 300 KLGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFC 357
K+G+G G V E G+ VAVK + + E + NEV + H N+V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
+ ++ E + G+L + + R + + + + + + R L YLH ++H
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQG---VIHR 165
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIK +ILL D K+SDFG Q K+ L GT ++APEV SR G +
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL--VGTPYWMAPEVISRLPYGT--E 221
Query: 478 SDVYSYGMMIIEMV 491
D++S G+M+IEM+
Sbjct: 222 VDIWSLGIMVIEMI 235
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 130
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH--D 184
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
K D++S G++ C + L + + + Y+RI +F F TE + +
Sbjct: 185 EKVDLWSLGVL------CYEFLVGKPPFEANTYQETYKRIS-RVEFTFPDFVTEGARDLI 237
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 238 SRL-------LKHNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMH--D 184
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 236
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 237 ISRL-------LKHNPSQRPMLREVLE 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 127
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 181
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
K D++S G++ C + L + + + Y+RI +F F TE + +
Sbjct: 182 EKVDLWSLGVL------CYEFLVGKPPFEANTYQETYKRIS-RVEFTFPDFVTEGARDLI 234
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 235 SRL-------LKHNPSQRPMLREVLE 253
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMH--D 184
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 236
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 237 ISRL-------LKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMH--D 189
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 241
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 242 ISRL-------LKHNPSQRPMLREVLE 261
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH--D 187
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 239
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 240 ISRL-------LKHNPSQRPMLREVLE 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE R
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEXIEGRXH--D 189
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 241
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 242 ISRL-------LKHNPSQRPXLREVLE 261
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 300 KLGQGGYGEV---YKGELPD--GQLVAVKVLKNSRCNGEEFINEVASISRTSHVN-IVTF 353
+LG+G +G V L D G LVAVK L++S + + I + H + IV +
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 354 LGFCYENKKNAL--IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
G Y + +L + E +P+G L F+ R +L+ + + I +G+EYL
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLG---S 133
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ-KKESAISMLHARGTIGYIAPEVYSRR 470
R VH D+ +NIL++ + KI+DFGLAK K+ + + I + APE S
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 471 FGGVSHKSDVYSYGMMIIEM 490
S +SDV+S+G+++ E+
Sbjct: 194 I--FSRQSDVWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 300 KLGQGGYGEV---YKGELPD--GQLVAVKVLKNSRCNGEEFINEVASISRTSHVN-IVTF 353
+LG+G +G V L D G LVAVK L++S + + I + H + IV +
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 354 LGFCYENKKNAL--IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
G Y + +L + E +P+G L F+ R +L+ + + I +G+EYL
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLG---S 145
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ-KKESAISMLHARGTIGYIAPEVYSRR 470
R VH D+ +NIL++ + KI+DFGLAK K+ + + I + APE S
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 471 FGGVSHKSDVYSYGMMIIEM 490
S +SDV+S+G+++ E+
Sbjct: 206 I--FSRQSDVWSFGVVLYEL 223
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 21/258 (8%)
Query: 315 PDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPN 372
P + VA+K + +C +E + E+ ++S+ H NIV++ + L+ +L+
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 373 GS-LDKFIH-----NDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILL 426
GS LD H ++ L+ T+ I + GLEYLH+ Q+ H D+K NILL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILL 154
Query: 427 DEDFCPKISDFG----LAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYS 482
ED +I+DFG LA + + GT ++APEV + G K+D++S
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPEVM-EQVRGYDFKADIWS 212
Query: 483 YGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVG 542
+G+ IE+ + L + Q + + K KM+ L
Sbjct: 213 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL-- 270
Query: 543 FWCIQTNPSERPSMHKVL 560
C+Q +P +RP+ ++L
Sbjct: 271 --CLQKDPEKRPTAAELL 286
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 131
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGX 185
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 186 KYYSTAVDIWSLGCIFAEMV 205
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 34/278 (12%)
Query: 292 RMTKSFRDKLGQGGYGEVY--KGELPDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHV 348
R T F + LG G + EV+ K L G+L A+K +K S + + NE+A + + H
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
NIVT L+ +L+ G L D+ + +R + E K + + ++YLH
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRIL--ERGVYTE-KDASLVIQQVLSAVKYLH 123
Query: 408 RGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAP 464
IVH D+KP+N+L +E+ I+DFGL+K Q M A GT GY+AP
Sbjct: 124 ENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAP 176
Query: 465 EVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFD 524
EV +++ S D +S G +I ++ C E T++ ++E+I+ G ++F+
Sbjct: 177 EVLAQK--PYSKAVDCWSIG-VITYILLCGYPPFYEETESK-----LFEKIKEGY-YEFE 227
Query: 525 GVATEEEKKIAKMMILVGFWC--IQTNPSERPSMHKVL 560
++ + AK F C ++ +P+ER + K L
Sbjct: 228 SPFWDDISESAK-----DFICHLLEKDPNERYTCEKAL 260
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 290 VKRMTKSFRDK------LGQGGYGEVY--KGELPDGQLVAVKVLKN----SRCNGEEFIN 337
V+ T F D+ LG+G +GEV K ++ GQ AVKV+ + + E +
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 98
Query: 338 EVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIA 396
EV + + H NI+ F + L+ E+ G L D+ I R +++ +I
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 155
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISML 453
+ G+ Y+H+ +IVH D+KP+N+LL+ +D +I DFGL+ E++ M
Sbjct: 156 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMK 209
Query: 454 HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMI-IEMVGC 493
GT YIAPEV G K DV+S G+++ I + GC
Sbjct: 210 DKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSGC 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 300 KLGQGGYGEV---YKGELPD--GQLVAVKVLKNSRCNGEEFINEVASISRTSHVN-IVTF 353
+LG+G +G V L D G LVAVK L++S + + I + H + IV +
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 354 LGFCYENKKNAL--IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
G Y + L + E +P+G L F+ R +L+ + + I +G+EYL
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLG---S 129
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ-KKESAISMLHARGTIGYIAPEVYSRR 470
R VH D+ +NIL++ + KI+DFGLAK K+ + + I + APE S
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 471 FGGVSHKSDVYSYGMMIIEM 490
S +SDV+S+G+++ E+
Sbjct: 190 I--FSRQSDVWSFGVVLYEL 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 125
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 179
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 180 KYYSTAVDIWSLGCIFAEMV 199
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 123
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 177
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 178 KYYSTAVDIWSLGCIFAEMV 197
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 290 VKRMTKSFRDK------LGQGGYGEVY--KGELPDGQLVAVKVLKN----SRCNGEEFIN 337
V+ T F D+ LG+G +GEV K ++ GQ AVKV+ + + E +
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 99
Query: 338 EVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIA 396
EV + + H NI+ F + L+ E+ G L D+ I R +++ +I
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 156
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISML 453
+ G+ Y+H+ +IVH D+KP+N+LL+ +D +I DFGL+ E++ M
Sbjct: 157 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMK 210
Query: 454 HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMI-IEMVGC 493
GT YIAPEV G K DV+S G+++ I + GC
Sbjct: 211 DKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSGC 248
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K + EE EV+ + + H NI
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YEN+ + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 78 IT-LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGVNYLHTK 134
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+I HFD+KP+NI+L + P K+ DFGLA + E + + GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPE 188
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + + + ++D++S G++ I + G + L D +T
Sbjct: 189 IVN--YEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 131
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 185
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 186 KYYSTAVDIWSLGCIFAEMV 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 123
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 177
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 178 KYYSTAVDIWSLGCIFAEMV 197
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 301 LGQGGYGEVYKGEL------PDGQLVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVT 352
LG+G +G+V K VAVK+LK + E + ++E + + +H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNI----------------------KLEWK 390
G C ++ LI E GSL F+ R + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI 450
+ A I++G++YL ++++VH D+ +NIL+ E KISDFGL++ +++S +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 451 SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKN 496
R + ++A E + +SDV+S+G+++ E+V N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGN 251
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 16/208 (7%)
Query: 290 VKRMTKSFRDK-LGQGGYGEVYKG---ELPDGQLVAVKVLKNSRCN---GEEFINEVASI 342
+ R + DK LG G +G V KG + VAVK+LKN + +E + E +
Sbjct: 1 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 60
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARG 402
+ + IV +G C E + L+ E+ G L+K++ +R++K K + ++ ++ G
Sbjct: 61 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMG 117
Query: 403 LEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI-SMLHARGTIGY 461
++YL + VH D+ +N+LL KISDFGL+K + E+ + H + + +
Sbjct: 118 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 174
Query: 462 IAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
APE + + S KSDV+S+G+++ E
Sbjct: 175 YAPECIN--YYKFSSKSDVWSFGVLMWE 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 128
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 182
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 183 KYYSTAVDIWSLGCIFAEMV 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 123
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 177
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 178 KYYSTAVDIWSLGCIFAEMV 197
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 89/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ + +H N+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 123
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 177
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 178 KYYSTAVDIWSLGCIFAEMV 197
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPAFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 301 LGQGGYGEVYK-GELPDGQLVAVK-VLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCY 358
LG+G +G+ K G+++ +K +++ F+ EV + H N++ F+G Y
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 359 ENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFD 418
++K+ I E + G+L I + + + W A IA G+ YLH + I+H D
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRD 133
Query: 419 IKPQNILLDEDFCPKISDFGLAK------------QAQKKESAISMLHARGTIGYIAPEV 466
+ N L+ E+ ++DFGLA+ ++ KK G ++APE+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ R K DV+S+G+++ E++G
Sbjct: 194 INGR--SYDEKVDVFSFGIVLCEIIG 217
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 180
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 181 KYYSTAVDIWSLGCIFAEMV 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 127
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 181
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 182 KYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 180
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 181 KYYSTAVDIWSLGCIFAEMV 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 127
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 181
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 182 KYYSTAVDIWSLGCIFAEMV 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 125
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 179
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 180 KYYSTAVDIWSLGCIFAEMV 199
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 48/322 (14%)
Query: 276 NHESLAPKRYSYS---DVKRMTKSFRDKLGQGGYGEVYKG------ELPDGQLVAVKVLK 326
N+ + P + Y + R SF LG G +G+V + + VAVK+LK
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 327 NSR--CNGEEFINEVASISRT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR 383
S E ++E+ +S +H+NIV LG C +I E G L F+ R
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 384 NIKLEWKTMYQI----------------AIGIARGLEYL-HRGCQVRIVHFDIKPQNILL 426
+ + KT I + +A+G+ +L + C +H D+ +NILL
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 201
Query: 427 DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV-SHKSDVYSYGM 485
KI DFGLA+ + + + +AR + ++APE F V + +SDV+SYG+
Sbjct: 202 THGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPE---SIFNCVYTFESDVWSYGI 258
Query: 486 MIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWC 545
+ E+ +L + Y+ I+ G A E I K C
Sbjct: 259 FLWELF----SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT-------C 307
Query: 546 IQTNPSERPSMHKVLEMLEGSI 567
+P +RP+ ++++++E I
Sbjct: 308 WDADPLKRPTFKQIVQLIEKQI 329
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 48/322 (14%)
Query: 276 NHESLAPKRYSYS---DVKRMTKSFRDKLGQGGYGEVYKG------ELPDGQLVAVKVLK 326
N+ + P + Y + R SF LG G +G+V + + VAVK+LK
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62
Query: 327 NSR--CNGEEFINEVASISRT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR 383
S E ++E+ +S +H+NIV LG C +I E G L F+ R
Sbjct: 63 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122
Query: 384 NIKLEWKTMYQI----------------AIGIARGLEYL-HRGCQVRIVHFDIKPQNILL 426
+ + KT I + +A+G+ +L + C +H D+ +NILL
Sbjct: 123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 178
Query: 427 DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV-SHKSDVYSYGM 485
KI DFGLA+ + + + +AR + ++APE F V + +SDV+SYG+
Sbjct: 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGI 235
Query: 486 MIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWC 545
+ E+ +L + Y+ I+ G A E I K C
Sbjct: 236 FLWELF----SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT-------C 284
Query: 546 IQTNPSERPSMHKVLEMLEGSI 567
+P +RP+ ++++++E I
Sbjct: 285 WDADPLKRPTFKQIVQLIEKQI 306
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 128
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 182
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 183 KYYSTAVDIWSLGCIFAEMV 202
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 127
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 186
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 187 VDVWSCGIVLTAMLA 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 125
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 179
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 180 KYYSTAVDIWSLGCIFAEMV 199
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 29/213 (13%)
Query: 302 GQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENK 361
+G +G V+K +L + + VAVK+ + EV S+ H NI+ F+G E +
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG--AEKR 89
Query: 362 KNA------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR------- 408
+ LI GSL F+ + + W + IA +ARGL YLH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
G + I H DIK +N+LL + I+DFGLA + + +SA GT Y+APEV
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 469 RRFGGVSHKS------DVYSYGMMIIEMVG-CT 494
G ++ + D+Y+ G+++ E+ CT
Sbjct: 207 ---GAINFQRDAFLRIDMYAMGLVLWELASRCT 236
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 43/286 (15%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYE 359
LGQG +G+V K D + A+K ++++ ++EV ++ +H +V + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 360 N----------KKNALIY---ELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
KK + ++ E N +L IH++ N+ + +++ I L Y+
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYI 132
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK------------ESAISMLH 454
H I+H ++KP NI +DE KI DFGLAK + S+ ++
Sbjct: 133 HSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 455 ARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYER 514
A GT Y+A EV G + K D YS G++ E + + V +I L
Sbjct: 190 AIGTAXYVATEVLDGT-GHYNEKIDXYSLGIIFFEXIYPFSTGXERV---NILKKLRSVS 245
Query: 515 IEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
IE D FD + EKKI +++ I +P++RP +L
Sbjct: 246 IEFPPD--FDDNKXKVEKKIIRLL-------IDHDPNKRPGARTLL 282
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 132
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI++FG + A GT+ Y+ PE+ R
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 186
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 238
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 239 ISRL-------LKHNPSQRPMLREVLE 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMH--D 187
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
K D++S G++ C + L + + + Y+RI +F F TE + +
Sbjct: 188 EKVDLWSLGVL------CYEFLVGKPPFEANTYQETYKRIS-RVEFTFPDFVTEGARDLI 240
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 241 SRL-------LKHNPSQRPMLREVLE 259
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 51/296 (17%)
Query: 301 LGQGGYGEVYKGEL------PDGQLVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVT 352
LG+G +G+V K VAVK+LK + E + ++E + + +H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNI----------------------KLEWK 390
G C ++ LI E GSL F+ R + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI 450
+ A I++G++YL ++++VH D+ +NIL+ E KISDFGL++ +++S +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 451 SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
R + ++A E + +SDV+S+G+++ E+V N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGN-------------- 251
Query: 511 IYERIEPGNDFQF--DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
Y I P F G E ++ M + C + P +RP + + LE
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 156
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A GT+ Y+ PE+ R
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMH--D 210
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 262
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 263 ISRL-------LKHNPSQRPMLREVLE 282
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 48/322 (14%)
Query: 276 NHESLAPKRYSYS---DVKRMTKSFRDKLGQGGYGEVYKG------ELPDGQLVAVKVLK 326
N+ + P + Y + R SF LG G +G+V + + VAVK+LK
Sbjct: 21 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 80
Query: 327 NSR--CNGEEFINEVASISRT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR 383
S E ++E+ +S +H+NIV LG C +I E G L F+ R
Sbjct: 81 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 140
Query: 384 NIKLEWKTMYQI----------------AIGIARGLEYL-HRGCQVRIVHFDIKPQNILL 426
+ + KT I + +A+G+ +L + C +H D+ +NILL
Sbjct: 141 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 196
Query: 427 DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV-SHKSDVYSYGM 485
KI DFGLA+ + + + +AR + ++APE F V + +SDV+SYG+
Sbjct: 197 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGI 253
Query: 486 MIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWC 545
+ E+ +L + Y+ I+ G A E I K C
Sbjct: 254 FLWELF----SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT-------C 302
Query: 546 IQTNPSERPSMHKVLEMLEGSI 567
+P +RP+ ++++++E I
Sbjct: 303 WDADPLKRPTFKQIVQLIEKQI 324
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 299 DKLGQGGYGEVYKG-ELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
D++G+G +GEVYKG + ++VA+K+ L+ + E+ E+ +S+ I + G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ K +I E + GS + + LE + I I +GL+YLH R +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLH---SERKI 138
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIK N+LL E K++DFG+A Q ++ I GT ++APEV +
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAYD 194
Query: 476 HKSDVYSYGMMIIEM 490
K+D++S G+ IE+
Sbjct: 195 FKADIWSLGITAIEL 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 48/322 (14%)
Query: 276 NHESLAPKRYSYS---DVKRMTKSFRDKLGQGGYGEVYKG------ELPDGQLVAVKVLK 326
N+ + P + Y + R SF LG G +G+V + + VAVK+LK
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 327 NSR--CNGEEFINEVASISRT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDR 383
S E ++E+ +S +H+NIV LG C +I E G L F+ R
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 384 NIKLEWKTMYQI----------------AIGIARGLEYL-HRGCQVRIVHFDIKPQNILL 426
+ + KT I + +A+G+ +L + C +H D+ +NILL
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 201
Query: 427 DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV-SHKSDVYSYGM 485
KI DFGLA+ + + + +AR + ++APE F V + +SDV+SYG+
Sbjct: 202 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE---SIFNCVYTFESDVWSYGI 258
Query: 486 MIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWC 545
+ E+ +L + Y+ I+ G A E I K C
Sbjct: 259 FLWELF----SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT-------C 307
Query: 546 IQTNPSERPSMHKVLEMLEGSI 567
+P +RP+ ++++++E I
Sbjct: 308 WDADPLKRPTFKQIVQLIEKQI 329
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 300 KLGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFC 357
K+G+G G V E G+ VAVK++ + E + NEV + H N+V
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
++ ++ E + G+L + ++L + + + + + L YLH ++H
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG---VIHR 165
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIK +ILL D K+SDFG Q K L GT ++APEV SR + +
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXL--VGTPYWMAPEVISRSL--YATE 221
Query: 478 SDVYSYGMMIIEMV 491
D++S G+M+IEMV
Sbjct: 222 VDIWSLGIMVIEMV 235
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G YGEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 23/202 (11%)
Query: 300 KLGQGGYGEVYKGELPDGQ-LVAVKVLKN-SRCNGEEFINEVASISRTSHVNIVTFL-GF 356
+LG G +G+VYK + + L A KV+ S E+++ E+ ++ H NIV L F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK-TMYQIAIGIARGLEYLHRGCQVRIV 415
YEN LI E G++D + ++LE T QI + + L+ L+ +I+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 416 HFDIKPQNILLDEDFCPKISDFGLA----KQAQKKESAISMLHARGTIGYIAPEVY---S 468
H D+K NIL D K++DFG++ + Q+++S I GT ++APEV +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI------GTPYWMAPEVVMCET 211
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
+ +K+DV+S G+ +IEM
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 292 RMTKSFRDKLGQGGYGEVYKGEL-----PDGQL-VAVKVLKNSRCNGEE--FINEVASIS 343
R F LG G +G+V + D L VAVK+LK++ E+ ++E+ +S
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 344 RT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARG 402
H NIV LG C +I E G L F+ + LE + IA A
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV-LETDPAFAIANSTAST 163
Query: 403 LEYLHRGCQV----------RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISM 452
+ LH QV +H D+ +N+LL KI DFGLA+ + I
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 453 LHARGTIGYIAPE-----VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSIC 507
+AR + ++APE VY+ +SDV+SYG+++ E+ N + S
Sbjct: 224 GNARLPVKWMAPESIFDCVYTV-------QSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276
Query: 508 HNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ L+ DG + K + + C P+ RP+ ++ L+
Sbjct: 277 YKLVK-----------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY + + A+KVL ++ + EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH---SKRVI 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI++FG + A GT+ Y+ PE+ R
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 187
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG + +T Y+RI +F F TE + +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRIS-RVEFTFPDFVTEGARDL 239
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ NPS+RP + +VLE
Sbjct: 240 ISRL-------LKHNPSQRPMLREVLE 259
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 45/299 (15%)
Query: 296 SFRDKLGQGGYGEVYKG------ELPDGQLVAVKVLKNSR--CNGEEFINEVASISRT-S 346
SF LG G +G+V + + VAVK+LK S E ++E+ +S +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQI----------- 395
H+NIV LG C +I E G L F+ R+ + KT I
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 396 -----AIGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESA 449
+ +A+G+ +L + C +H D+ +NILL KI DFGLA+ + +
Sbjct: 162 DLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 450 ISMLHARGTIGYIAPEVYSRRFGGV-SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+ +AR + ++APE F V + +SDV+SYG+ + E+ +L
Sbjct: 218 VVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWELF----SLGSSPYPGMPVD 270
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSI 567
+ Y+ I+ G A E I K C +P +RP+ ++++++E I
Sbjct: 271 SKFYKMIKEGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIEKQI 322
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAV-KVLKNSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+ K+ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAV-KVLKNSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+ K+ ++ G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 123
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 177
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 178 KYYSTAVDIWSLGCIFAEMV 197
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 23/202 (11%)
Query: 300 KLGQGGYGEVYKGELPDGQ-LVAVKVLKN-SRCNGEEFINEVASISRTSHVNIVTFL-GF 356
+LG G +G+VYK + + L A KV+ S E+++ E+ ++ H NIV L F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK-TMYQIAIGIARGLEYLHRGCQVRIV 415
YEN LI E G++D + ++LE T QI + + L+ L+ +I+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 416 HFDIKPQNILLDEDFCPKISDFGLA----KQAQKKESAISMLHARGTIGYIAPEVY---S 468
H D+K NIL D K++DFG++ + Q+++S I GT ++APEV +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI------GTPYWMAPEVVMCET 211
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
+ +K+DV+S G+ +IEM
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 33/210 (15%)
Query: 299 DKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLG 355
+K+G+G YG VYK + G+ A+K ++ + + I E++ + H NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIK---------LEWKTMYQIAIGIARGLEYL 406
+ K+ L++E H D+++K LE T + + G+ Y
Sbjct: 68 VIHTKKRLVLVFE-----------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEV 466
H R++H D+KPQN+L++ + KI+DFGLA+ + H T+ Y AP+V
Sbjct: 117 H---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT--HEVVTLWYRAPDV 171
Query: 467 Y--SRRFGGVSHKSDVYSYGMMIIEMVGCT 494
S+++ S D++S G + EMV T
Sbjct: 172 LMGSKKY---STTIDIWSVGCIFAEMVNGT 198
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 18 IGEGQFGDVHQGIYMSPENP-AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 189
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 190 --TSASDVWMFGVCMWEIL 206
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 123/296 (41%), Gaps = 51/296 (17%)
Query: 301 LGQGGYGEVYKGEL------PDGQLVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVT 352
LG+G +G+V K VAVK+LK + E + ++E + + +H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNI----------------------KLEWK 390
G C ++ LI E GSL F+ R + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI 450
+ A I++G++YL ++ +VH D+ +NIL+ E KISDFGL++ +++S +
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 451 SMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
R + ++A E + +SDV+S+G+++ E+V N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGN-------------- 251
Query: 511 IYERIEPGNDFQF--DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
Y I P F G E ++ M + C + P +RP + + LE
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 37/221 (16%)
Query: 301 LGQGGYGEVYKGELP------DGQLVAVKVLKN--SRCNGEEFINEVASISRTSHVNIVT 352
+G+G +G V++ P +VAVK+LK S +F E A ++ + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFI------------HNDRNIK----------LEWK 390
LG C K L++E M G L++F+ H+D + + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 391 TMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAI 450
IA +A G+ YL + + VH D+ +N L+ E+ KI+DFGL++ +
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 451 SMLHARGTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEM 490
+ + I ++ PE ++ R+ + +SDV++YG+++ E+
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRY---TTESDVWAYGVVLWEI 269
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 33/210 (15%)
Query: 299 DKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLG 355
+K+G+G YG VYK + G+ A+K ++ + + I E++ + H NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIK---------LEWKTMYQIAIGIARGLEYL 406
+ K+ L++E H D+++K LE T + + G+ Y
Sbjct: 68 VIHTKKRLVLVFE-----------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEV 466
H R++H D+KPQN+L++ + KI+DFGLA+ + H T+ Y AP+V
Sbjct: 117 H---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT--HEIVTLWYRAPDV 171
Query: 467 Y--SRRFGGVSHKSDVYSYGMMIIEMVGCT 494
S+++ S D++S G + EMV T
Sbjct: 172 LMGSKKY---STTIDIWSVGCIFAEMVNGT 198
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YEN+ + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 78 IT-LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGVNYLHTK 134
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+I HFD+KP+NI+L + P K+ DFGLA + E + + GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPE 188
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 189 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 18 IGEGQFGDVHQGIYMSPENP-AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 189
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 190 --TSASDVWMFGVCMWEIL 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YEN+ + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 78 IT-LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGVNYLHTK 134
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+I HFD+KP+NI+L + P K+ DFGLA + E + + GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPE 188
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 189 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YEN+ + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 78 IT-LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGVNYLHTK 134
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+I HFD+KP+NI+L + P K+ DFGLA + E + + GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPE 188
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 189 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 398 IGEGQFGDVHQGIYMSPENP-AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 457 IGVITENPV-WIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 569
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 570 --TSASDVWMFGVCMWEIL 586
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 76 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 130
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 131 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 186
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 187 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YEN+ + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 78 IT-LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGVNYLHTK 134
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+I HFD+KP+NI+L + P K+ DFGLA + E + + GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPE 188
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 189 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 46 IGEGQFGDVHQGIYMSPENP-ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 105 IGVITENPV-WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 217
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 218 --TSASDVWMFGVCMWEIL 234
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 76 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 130
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 131 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 186
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 187 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 224
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 18 IGEGQFGDVHQGIYMSPENP-ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 189
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 190 --TSASDVWMFGVCMWEIL 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 125
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+N+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEI----LLGC 179
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 180 KYYSTAVDIWSLGCIFAEMV 199
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 23 IGEGQFGDVHQGIYMSPENP-ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 82 IGVITENPV-WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 194
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 195 --TSASDVWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 15 IGEGQFGDVHQGIYMSPENP-ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 74 IGVITENPV-WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 186
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 187 --TSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 20 IGEGQFGDVHQGIYMSPENP-ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 79 IGVITENPV-WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 191
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 192 --TSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 21 IGEGQFGDVHQGIYMSPENP-ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 80 IGVITENPV-WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ + C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 192
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 193 --TSASDVWMFGVCMWEIL 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+N+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 127 LHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEI----LLGC 180
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 181 KYYSTAVDIWSLGCIFAEMV 200
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 299 DKLGQGGYGEVYKGELP-DGQLVAVKVLKNSRCNGEEFIN----EVASISRTSHVNIVTF 353
D LG G +G+V GE G VAVK+L + + + E+ ++ H +I+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI-HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
++ E + G L +I + R ++E + ++Q I ++Y HR
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCHRHM-- 131
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
+VH D+KP+N+LLD KI+DFGL+ E + + G+ Y APEV S R
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRLY 187
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEK 532
+ D++S G+++ ++ T DDE T ++++I G + + +
Sbjct: 188 A-GPEVDIWSCGVILYALLCGTLPFDDEHVPT------LFKKIRGGVFY----IPEYLNR 236
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+A +++ +Q +P +R ++ + E
Sbjct: 237 SVATLLM----HMLQVDPLKRATIKDIRE 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 51/302 (16%)
Query: 292 RMTKSFRDKLGQGGYGEVYKGEL-----PDGQL-VAVKVLKNSRCNGEE--FINEVASIS 343
R F LG G +G+V + D L VAVK+LK++ E+ ++E+ +S
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 344 RT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEW------------- 389
H NIV LG C +I E G L F+ R LE+
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 390 -KTMYQIAIGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKE 447
+ + + +A+G+ +L + C +H D+ +N+LL KI DFGLA+
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 220
Query: 448 SAISMLHARGTIGYIAPE-----VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVT 502
+ I +AR + ++APE VY+ +SDV+SYG+++ E+ N +
Sbjct: 221 NYIVKGNARLPVKWMAPESIFDCVYTV-------QSDVWSYGILLWEIFSLGLNPYPGIL 273
Query: 503 DTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEM 562
S + L+ DG + K + + C P+ RP+ ++
Sbjct: 274 VNSKFYKLVK-----------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 322
Query: 563 LE 564
L+
Sbjct: 323 LQ 324
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 299 DKLGQGGYGEVYKGELP-DGQLVAVKVLKNSRCNGEEFIN----EVASISRTSHVNIVTF 353
D LG G +G+V GE G VAVK+L + + + E+ ++ H +I+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI-HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
++ E + G L +I + R ++E + ++Q I ++Y HR
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCHRHM-- 131
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
+VH D+KP+N+LLD KI+DFGL+ E + + G+ Y APEV S R
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEVISGRLY 187
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEK 532
+ D++S G+++ ++ T DDE T ++++I G + + +
Sbjct: 188 A-GPEVDIWSCGVILYALLCGTLPFDDEHVPT------LFKKIRGGVFY----IPEYLNR 236
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+A +++ +Q +P +R ++ + E
Sbjct: 237 SVATLLM----HMLQVDPLKRATIKDIRE 261
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 127
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+N+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEI----LLGC 181
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 182 KYYSTAVDIWSLGCIFAEMV 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 70 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 125
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+N+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEI----LLGC 179
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 180 KYYSTAVDIWSLGCIFAEMV 199
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 36/279 (12%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGFC 357
+G+G +G+VY G G+ VA++++ R N ++ F EV + +T H N+V F+G C
Sbjct: 41 IGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
A+I L +L + D I L+ QIA I +G+ YLH I+H
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHK 154
Query: 418 DIKPQNILLDEDFCPKISDFGL-----AKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
D+K +N+ D I+DFGL QA ++E + + G + ++APE+ +
Sbjct: 155 DLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRI--QNGWLCHLAPEIIRQLSP 211
Query: 473 GV-------SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDG 525
S SDV++ G + E+ + + T +I++ G + +
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYEL-----HAREWPFKTQPAEAIIWQM---GTGMKPNL 263
Query: 526 VATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
K+I+ +++ C ERP+ K+++MLE
Sbjct: 264 SQIGMGKEISDILLF----CWAFEQEERPTFTKLMDMLE 298
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YEN+ + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 78 IT-LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGVNYLHTK 134
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+I HFD+KP+NI+L + P K+ DFGLA + E + + GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPE 188
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 189 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L KF+ + + + +GL + H R+
Sbjct: 72 DVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 127
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 181
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 182 KYYSTAVDIWSLGCIFAEMV 201
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 33/207 (15%)
Query: 299 DKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLG 355
+K+G+G YG VYK + G+ A+K ++ + + I E++ + H NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIK---------LEWKTMYQIAIGIARGLEYL 406
+ K+ L++E H D+++K LE T + + G+ Y
Sbjct: 68 VIHTKKRLVLVFE-----------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEV 466
H R++H D+KPQN+L++ + KI+DFGLA+ + H T+ Y AP+V
Sbjct: 117 H---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT--HEVVTLWYRAPDV 171
Query: 467 Y--SRRFGGVSHKSDVYSYGMMIIEMV 491
S+++ S D++S G + EMV
Sbjct: 172 LMGSKKY---STTIDIWSVGCIFAEMV 195
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 19/197 (9%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+LG G G V K + P G ++A K+ L+ + I E+ + + IV F G
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 82
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + + ++ E M GSLD+ + + I E + +++I + RGL YL Q I+H
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVLKEAKRIPEE--ILGKVSIAVLRGLAYLREKHQ--IMH 138
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGGV- 474
D+KP NIL++ K+ DFG++ Q SM ++ GT Y+APE R G
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMAPE----RLQGTH 189
Query: 475 -SHKSDVYSYGMMIIEM 490
S +SD++S G+ ++E+
Sbjct: 190 YSVQSDIWSMGLSLVEL 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 301 LGQGGYGEVYKG-----ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTF 353
+G+G +G+V++G E P VA+K KN + E+F+ E ++ + H +IV
Sbjct: 398 IGEGQFGDVHQGIYMSPENP-AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+G EN +I EL G L F+ R L+ ++ A ++ L YL R
Sbjct: 457 IGVITENPV-WIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYSRRFG 472
VH DI +N+L+ C K+ DFGL++ + + + I ++APE + RRF
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRF- 569
Query: 473 GVSHKSDVYSYGMMIIEMV 491
+ SDV+ +G+ + E++
Sbjct: 570 --TSASDVWMFGVCMWEIL 586
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 300 KLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSHVN-IVTFLG 355
++G+G YG V K P GQ++AVK ++++ E+ + ++ + R+S IV F G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 356 FCYENKKNALIYELMPNGSLDKF---IHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+ + ELM + S DKF +++ + + + + +I + + L +L +
Sbjct: 89 ALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--L 145
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY--SRR 470
+I+H DIKP NILLD K+ DFG++ Q +I+ G Y+APE S
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 471 FGGVSHKSDVYSYGMMIIEM 490
G +SDV+S G+ + E+
Sbjct: 203 RQGYDVRSDVWSLGITLYEL 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L F+ + + + +GL + H R+
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 127
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 181
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 182 KYYSTAVDIWSLGCIFAEMV 201
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K E G A K +K R E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L YENK + LI EL+ G L F+ ++ E T + I G+ YLH
Sbjct: 77 IT-LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVYYLH-- 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
++I HFD+KP+NI+L + P KI DFGL A K + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKIDFGNEFKNIFGTPEFVAPE 187
Query: 466 VYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDT 504
+ + G+ ++D++S G++ I + G + L D +T
Sbjct: 188 IVNYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L F+ + + + +GL + H R+
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 127
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEI----LLGC 181
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 182 KYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L F+ + + + +GL + H R+
Sbjct: 71 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEI----LLGC 180
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 181 KYYSTAVDIWSLGCIFAEMV 200
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 123/296 (41%), Gaps = 45/296 (15%)
Query: 292 RMTKSFRDKLGQGGYGEVYKGEL-----PDGQL-VAVKVLKNSRCNGEE--FINEVASIS 343
R F LG G +G+V + D L VAVK+LK++ E+ ++E+ +S
Sbjct: 37 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 344 RT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKL--------EWKTMYQ 394
H NIV LG C +I E G L F+ L E + +
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 395 IAIGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML 453
+ +A+G+ +L + C +H D+ +N+LL KI DFGLA+ + I
Sbjct: 157 FSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 212
Query: 454 HARGTIGYIAPE-----VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+AR + ++APE VY+ +SDV+SYG+++ E+ N + S +
Sbjct: 213 NARLPVKWMAPESIFDCVYTV-------QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 265
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
L+ DG + K + + C P+ RP+ ++ L+
Sbjct: 266 KLVK-----------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 300 KLGQGGYGEVYKG--ELPDGQL-VAVKVLKN--SRCNGEEFINEVASISRTSHVNIVTFL 354
+LG G +G V +G + Q+ VA+KVLK + + EE + E + + + IV +
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
G C + + L+ E+ G L KF+ R ++ + ++ ++ G++YL +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLE---EKNF 131
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGG 473
VH D+ +N+LL KISDFGL+K +S + A + + + APE + F
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN--FRK 189
Query: 474 VSHKSDVYSYGMMIIE 489
S +SDV+SYG+ + E
Sbjct: 190 FSSRSDVWSYGVTMWE 205
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 120/297 (40%), Gaps = 43/297 (14%)
Query: 292 RMTKSFRDKLGQGGYGEVYKGEL-----PDGQL-VAVKVLKNSRCNGEE--FINEVASIS 343
R F LG G +G+V + D L VAVK+LK++ E+ ++E+ +S
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 344 RT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARG 402
H NIV LG C +I E G L F+ + LE + IA
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV-LETDPAFAIANSTLST 163
Query: 403 LEYLHRGCQV----------RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISM 452
+ LH QV +H D+ +N+LL KI DFGLA+ + I
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 453 LHARGTIGYIAPE-----VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSIC 507
+AR + ++APE VY+ +SDV+SYG+++ E+ N + S
Sbjct: 224 GNARLPVKWMAPESIFDCVYTV-------QSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276
Query: 508 HNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
+ L+ DG + K + + C P+ RP+ ++ L+
Sbjct: 277 YKLVK-----------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 23/202 (11%)
Query: 300 KLGQGGYGEVYKGELPDGQ-LVAVKVLKN-SRCNGEEFINEVASISRTSHVNIVTFL-GF 356
+LG G +G+VYK + + L A KV+ S E+++ E+ ++ H NIV L F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK-TMYQIAIGIARGLEYLHRGCQVRIV 415
YEN LI E G++D + ++LE T QI + + L+ L+ +I+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 416 HFDIKPQNILLDEDFCPKISDFGLA----KQAQKKESAISMLHARGTIGYIAPEVY---S 468
H D+K NIL D K++DFG++ + Q+++ I GT ++APEV +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAPEVVMCET 211
Query: 469 RRFGGVSHKSDVYSYGMMIIEM 490
+ +K+DV+S G+ +IEM
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 34/304 (11%)
Query: 263 TREDDRNVEAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYK-GELPDGQLVA 321
T + + +EAF+ + + D +++++ LG G G V+K P G ++A
Sbjct: 2 TLQQRKRLEAFLTQKQKVG--ELKDDDFEKISE-----LGAGNGGVVFKVSHKPSGLVMA 54
Query: 322 VKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFI 379
K+ L+ + I E+ + + IV F G Y + + ++ E M GSLD+ +
Sbjct: 55 RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL 114
Query: 380 HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGL 439
+ ++ + + +++I + +GL YL + +I+H D+KP NIL++ K+ DFG+
Sbjct: 115 K--KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV 170
Query: 440 AKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGGV--SHKSDVYSYGMMIIEMVGCTKN 496
+ Q SM ++ GT Y++PE R G S +SD++S G+ ++EM
Sbjct: 171 SGQLID-----SMANSFVGTRSYMSPE----RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
Query: 497 LDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSM 556
+ +I L Y EP + E + + K C+ NP+ER +
Sbjct: 222 IGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK--------CLIKNPAERADL 273
Query: 557 HKVL 560
+++
Sbjct: 274 KQLM 277
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 131/273 (47%), Gaps = 33/273 (12%)
Query: 300 KLGQGGYGEVYK-GELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+LG G G V+K P G ++A K+ L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + + ++ E M GSLD+ + + ++ + + +++I + +GL YL + +I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGGV- 474
D+KP NIL++ K+ DFG++ Q SM ++ GT Y++PE R G
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPE----RLQGTH 179
Query: 475 -SHKSDVYSYGMMIIEM-VGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEK 532
S +SD++S G+ ++EM VG + + S I+E + D + E
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELL--------DYIVNEPPP 231
Query: 533 KIAKMMILVGFW-----CIQTNPSERPSMHKVL 560
K+ + + F C+ NP+ER + +++
Sbjct: 232 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 264
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 290 VKRMTKSFRDK------LGQGGYGEVY--KGELPDGQLVAVKVLKN----SRCNGEEFIN 337
V+ T F D+ LG+G +GEV K ++ GQ AVKV+ + + E +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 338 EVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIA 396
EV + + H NI F + L+ E+ G L D+ I R +++ +I
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 132
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISML 453
+ G+ Y H+ +IVH D+KP+N+LL+ +D +I DFGL+ + + +
Sbjct: 133 RQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI 189
Query: 454 HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMI-IEMVGC 493
GT YIAPEV G K DV+S G+++ I + GC
Sbjct: 190 ---GTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGC 224
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 300 KLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFC 357
K+G+G G V + G+LVAVK + + E + NEV + H N+V
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
+ ++ E + G+L + + R + + + + + + + L LH ++H
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHR 149
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIK +ILL D K+SDFG Q K+ L GT ++APE+ SR G +
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYG--PE 205
Query: 478 SDVYSYGMMIIEMV 491
D++S G+M+IEMV
Sbjct: 206 VDIWSLGIMVIEMV 219
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 45/296 (15%)
Query: 292 RMTKSFRDKLGQGGYGEVYKGEL-----PDGQL-VAVKVLKNSRCNGEE--FINEVASIS 343
R F LG G +G+V + D L VAVK+LK++ E+ ++E+ +S
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 344 RT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIH--------NDRNIKLEWKTMYQ 394
H NIV LG C +I E G L F+ + LE + +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 395 IAIGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML 453
+ +A+G+ +L + C +H D+ +N+LL KI DFGLA+ + I
Sbjct: 165 FSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 220
Query: 454 HARGTIGYIAPE-----VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICH 508
+AR + ++APE VY+ +SDV+SYG+++ E+ N + S +
Sbjct: 221 NARLPVKWMAPESIFDCVYTV-------QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 273
Query: 509 NLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
L+ DG + K + + C P+ RP+ ++ L+
Sbjct: 274 KLVK-----------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 300 KLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFC 357
K+G+G G V + G+LVAVK + + E + NEV + H N+V
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
+ ++ E + G+L + + R + + + + + + + L LH ++H
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHR 140
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIK +ILL D K+SDFG Q K+ L GT ++APE+ SR G +
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYG--PE 196
Query: 478 SDVYSYGMMIIEMV 491
D++S G+M+IEMV
Sbjct: 197 VDIWSLGIMVIEMV 210
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 300 KLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFC 357
K+G+G G V + G+LVAVK + + E + NEV + H N+V
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
+ ++ E + G+L + + R + + + + + + + L LH ++H
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHR 151
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIK +ILL D K+SDFG Q K+ L GT ++APE+ SR G +
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYG--PE 207
Query: 478 SDVYSYGMMIIEMV 491
D++S G+M+IEMV
Sbjct: 208 VDIWSLGIMVIEMV 221
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 300 KLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFC 357
K+G+G G V + G+LVAVK + + E + NEV + H N+V
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
+ ++ E + G+L + + R + + + + + + + L LH ++H
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHR 144
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIK +ILL D K+SDFG Q K+ L GT ++APE+ SR G +
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYG--PE 200
Query: 478 SDVYSYGMMIIEMV 491
D++S G+M+IEMV
Sbjct: 201 VDIWSLGIMVIEMV 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 300 KLGQGGYGEVYKGELPDGQ-LVAVKVLKNSRCNG--------------EEFINEVASISR 344
KLG G YGEV + +G A+KV+K S+ + EE NE++ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 345 TSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLE 404
H NI+ + K L+ E G L + I N K + I I G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGIC 160
Query: 405 YLHRGCQVRIVHFDIKPQNILLDED---FCPKISDFGLAKQAQKKESAISMLHARGTIGY 461
YLH+ IVH DIKP+NILL+ KI DFGL+ K L GT Y
Sbjct: 161 YLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL---GTAYY 214
Query: 462 IAPEVYSRRFGGVSHKSDVYSYGMMI 487
IAPEV +++ + K DV+S G+++
Sbjct: 215 IAPEVLKKKY---NEKCDVWSCGVIM 237
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 300 KLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFC 357
K+G+G G V + G+LVAVK + + E + NEV + H N+V
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
+ ++ E + G+L + + R + + + + + + + L LH ++H
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHR 271
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIK +ILL D K+SDFG Q K+ L GT ++APE+ SR G +
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYG--PE 327
Query: 478 SDVYSYGMMIIEMV 491
D++S G+M+IEMV
Sbjct: 328 VDIWSLGIMVIEMV 341
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLGFC 357
LG+G GEV + VAVK++ R E E+ +H N+V F G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
E L E G L I D I + + + G+ YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIKP+N+LLDE KISDFGLA + + GT+ Y+APE+ RR +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 478 SDVYSYGMMIIEMVG 492
DV+S G+++ M+
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 24/201 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K + G+ A K +K R + EE EV + H NI
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L +ENK + LI EL+ G L F+ ++ + T Q I G+ YLH
Sbjct: 78 IT-LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLHSK 134
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
RI HFD+KP+NI+L + P K+ DFG+ A K E+ + GT ++APE
Sbjct: 135 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI---AHKIEAGNEFKNIFGTPEFVAPE 188
Query: 466 VYSRRFGGVSHKSDVYSYGMM 486
+ + G+ ++D++S G++
Sbjct: 189 IVNYEPLGL--EADMWSIGVI 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L F+ + + + +GL + H R+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+N+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEI----LLGC 178
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 179 KYYSTAVDIWSLGCIFAEMV 198
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 301 LGQGGYGEVYKGEL-PDGQLVA---VKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
LG+GG+GEV ++ G++ A ++ + + GE I + V L +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 357 CYENKKN-ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
YE K L+ LM G L I++ A I GLE LHR RIV
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIV 308
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY-SRRFGGV 474
+ D+KP+NILLD+ +ISD GLA + ++ + GT+GY+APEV + R+
Sbjct: 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMAPEVVKNERY--- 362
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G ++ EM+
Sbjct: 363 TFSPDWWALGCLLYEMIA 380
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 299 DKLGQGGYGEVYKGE-LPDGQLVAVKVLK-NSRCNG--EEFINEVASISRTSHVNIVTFL 354
+K+G+G YG VYK G++VA+K ++ ++ G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ K L++E + + L F+ + + + +GL + H R+
Sbjct: 68 DVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RV 123
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KPQN+L++ + K++DFGLA+ + H T+ Y APE+ G
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEI----LLGC 177
Query: 475 SHKS---DVYSYGMMIIEMV 491
+ S D++S G + EMV
Sbjct: 178 KYYSTAVDIWSLGCIFAEMV 197
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 26/229 (11%)
Query: 268 RNVEAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYK-GELPDGQLVAVKV-- 324
+ +EAF+ + + D +++++ LG G G V+K P G ++A K+
Sbjct: 50 KRLEAFLTQKQKVG--ELKDDDFEKISE-----LGAGNGGVVFKVSHKPSGLVMARKLIH 102
Query: 325 LKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRN 384
L+ + I E+ + + IV F G Y + + ++ E M GSLD+ + +
Sbjct: 103 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KA 160
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
++ + + +++I + +GL YL + +I+H D+KP NIL++ K+ DFG++ Q
Sbjct: 161 GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 218
Query: 445 KKESAISMLHA-RGTIGYIAPEVYSRRFGGV--SHKSDVYSYGMMIIEM 490
SM ++ GT Y++PE R G S +SD++S G+ ++EM
Sbjct: 219 D-----SMANSFVGTRSYMSPE----RLQGTHYSVQSDIWSMGLSLVEM 258
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 300 KLGQGGYGEVYKGELP-DGQLVAVKVLKNSRCNGEEF------INEVASISRTS---HVN 349
++G G YG VYK P G VA+K ++ G + EVA + R H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 350 IVTFLGFCYENK-----KNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLE 404
+V + C ++ K L++E + + L ++ L +T+ + RGL+
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 405 YLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAP 464
+LH C IVH D+KP+NIL+ K++DFGLA+ + +++ T+ Y AP
Sbjct: 135 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVVVTLWYRAP 188
Query: 465 EVYSRRFGGVSHKSDVYSYGMMIIEM 490
EV + + D++S G + EM
Sbjct: 189 EVLLQ--STYATPVDMWSVGCIFAEM 212
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 24/201 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNG-------EEFINEVASISRTSHVNI 350
++LG G + V K + G+ A K +K R + EE EV + H NI
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L +ENK + LI EL+ G L F+ ++ + T Q I G+ YLH
Sbjct: 71 IT-LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLH-- 125
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
RI HFD+KP+NI+L + P K+ DFG+ A K E+ + GT ++APE
Sbjct: 126 -SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI---AHKIEAGNEFKNIFGTPEFVAPE 181
Query: 466 VYSRRFGGVSHKSDVYSYGMM 486
+ + G+ ++D++S G++
Sbjct: 182 IVNYEPLGL--EADMWSIGVI 200
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 300 KLGQGGYGEVYKG--ELPDGQL-VAVKVLKN--SRCNGEEFINEVASISRTSHVNIVTFL 354
+LG G +G V +G + Q+ VA+KVLK + + EE + E + + + IV +
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
G C + + L+ E+ G L KF+ R ++ + ++ ++ G++YL +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLE---EKNF 457
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGG 473
VH ++ +N+LL KISDFGL+K +S + A + + + APE + F
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN--FRK 515
Query: 474 VSHKSDVYSYGMMIIEMV 491
S +SDV+SYG+ + E +
Sbjct: 516 FSSRSDVWSYGVTMWEAL 533
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 301 LGQGGYGEVYKGEL-PDGQLVA---VKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
LG+GG+GEV ++ G++ A ++ + + GE I + V L +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 357 CYENKKN-ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
YE K L+ LM G L I++ A I GLE LHR RIV
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIV 308
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY-SRRFGGV 474
+ D+KP+NILLD+ +ISD GLA + ++ + GT+GY+APEV + R+
Sbjct: 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMAPEVVKNERY--- 362
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G ++ EM+
Sbjct: 363 TFSPDWWALGCLLYEMIA 380
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 300 KLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFC 357
K+G+G G V + G+LVAVK + + E + NEV + H N+V
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 358 YENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHF 417
+ ++ E + G+L + + R + + + + + + + L LH ++H
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHR 194
Query: 418 DIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHK 477
DIK +ILL D K+SDFG Q K+ L GT ++APE+ SR G +
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYG--PE 250
Query: 478 SDVYSYGMMIIEMV 491
D++S G+M+IEMV
Sbjct: 251 VDIWSLGIMVIEMV 264
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 299 DKLGQGGYGEVYKG-ELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+++G+G +GEV+KG + Q+VA+K+ L+ + E+ E+ +S+ + + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ K +I E + GS + + + TM + I +GL+YLH + +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSE---KKI 142
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIK N+LL E K++DFG+A Q ++ I GT ++APEV +
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQ--SAYD 198
Query: 476 HKSDVYSYGMMIIEM 490
K+D++S G+ IE+
Sbjct: 199 SKADIWSLGITAIEL 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 301 LGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
LG+G +GEV K + Q AVKV+ + ++ + EV + + H NI+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ ++ EL G L D+ I R +I + G+ Y+H+ IV
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 416 HFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
H D+KP+NILL ++D KI DFGL+ Q+ M GT YIAPEV G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR---G 197
Query: 473 GVSHKSDVYSYGMMIIEMVGCT-----KNLDDEVTDTSICHNLIYERIEPGNDFQFD--- 524
K DV+S G+++ ++ T KN D I +R+E G + FD
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-----------ILKRVETGK-YAFDLPQ 245
Query: 525 --GVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE---MLEGSIENLQIPPKPSLF 579
++ + + I KM+ +PS R + + LE + + S E I PSL
Sbjct: 246 WRTISDDAKDLIRKMLTF--------HPSLRITATQCLEHPWIQKYSSETPTISDLPSLE 297
Query: 580 SA 581
SA
Sbjct: 298 SA 299
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 301 LGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
LG+G +GEV K + Q AVKV+ + ++ + EV + + H NI+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ ++ EL G L D+ I R +I + G+ Y+H+ IV
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 416 HFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
H D+KP+NILL ++D KI DFGL+ Q+ M GT YIAPEV G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR---G 197
Query: 473 GVSHKSDVYSYGMMIIEMVGCT 494
K DV+S G+++ ++ T
Sbjct: 198 TYDEKCDVWSAGVILYILLSGT 219
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 27/275 (9%)
Query: 293 MTKSFR-DKLGQGGYGE-VYKGELPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSH 347
M K R K+G+G +G+ + DG+ +K + SR + EE EVA ++ H
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
NIV + EN ++ + G L K I+ + + + + + I L+++H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEV 466
+I+H DIK QNI L +D ++ DFG+A+ S + + A GT Y++PE+
Sbjct: 143 ---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN---STVELARACIGTPYYLSPEI 196
Query: 467 YSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGV 526
+ ++KSD+++ G ++ E+ CT + NL+ + I F V
Sbjct: 197 CENK--PYNNKSDIWALGCVLYEL--CTLK---HAFEAGSMKNLVLKIISGS----FPPV 245
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ + ++ + NP +RPS++ +LE
Sbjct: 246 SLHYSYDLRSLV----SQLFKRNPRDRPSVNSILE 276
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 301 LGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVNIVTFLGF 356
LG+G +GEV K + Q AVKV+ + ++ + EV + + H NI+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ ++ EL G L D+ I R +I + G+ Y+H+ IV
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 416 HFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
H D+KP+NILL ++D KI DFGL+ Q+ M GT YIAPEV G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR---G 197
Query: 473 GVSHKSDVYSYGMMIIEMVGCT 494
K DV+S G+++ ++ T
Sbjct: 198 TYDEKCDVWSAGVILYILLSGT 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEE--FINEVASISRTSHVNI-VTFLG 355
+LG+G YG V K +P GQ+ AVK ++ + + E+ + ++ RT VTF G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 356 FCYENKKNALIYELMPNGSLDKFIHN--DRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
+ + EL + SLDKF D+ + + +IA+ I + LE+LH ++
Sbjct: 101 ALFREGDVWICXELX-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLS 157
Query: 414 IVHFDIKPQNILLDEDFCPKISDFG----LAKQAQKKESAISMLHARGTIGYIAPEVYSR 469
++H D+KP N+L++ K DFG L K A G Y APE +
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA-------GCKPYXAPERINP 210
Query: 470 RFG--GVSHKSDVYSYGMMIIEM 490
G S KSD++S G+ IE+
Sbjct: 211 ELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 37/271 (13%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVTFLG 355
LG+G + VY+ E + G VA+K++ + NEV + H +I+
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ L+ E+ NG +++++ N R I G+ YLH I+
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG---IL 134
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-----GTIGYIAPEVYSRR 470
H D+ N+LL + KI+DFGLA Q + M H + GT YI+PE+ +R
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLATQ-------LKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 471 FGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEE 530
G+ +SDV+S G M ++ D + ++ ++ D++ + E
Sbjct: 188 AHGL--ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL-------ADYEMPSFLSIE 238
Query: 531 EKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
K + + ++ NP++R S+ VL+
Sbjct: 239 AKDLIHQL-------LRRNPADRLSLSSVLD 262
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 299 DKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG--EEFINEVASISRTSHVNIVTFLG 355
+KLG G Y VYKG G VA+K +K G I E++ + H NIV
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 356 FCYENKKNALIYELMPNGSLDKFI------HNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ K L++E M N L K++ + R ++L +Q + +GL + H
Sbjct: 71 VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCHEN 127
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY-- 467
+I+H D+KPQN+L+++ K+ DFGLA+ + S T+ Y AP+V
Sbjct: 128 ---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS--SEVVTLWYRAPDVLMG 182
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
SR + S D++S G ++ EM+
Sbjct: 183 SRTY---STSIDIWSCGCILAEMI 203
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 24/201 (11%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSR-------CNGEEFINEVASISRTSHVNI 350
++LG G + V K + G+ A K +K R + EE EV + H NI
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 351 VTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+T L +ENK + LI EL+ G L F+ ++ + T Q I G+ YLH
Sbjct: 92 IT-LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLH-- 146
Query: 410 CQVRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
RI HFD+KP+NI+L + P K+ DFG+ A K E+ + GT ++APE
Sbjct: 147 -SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI---AHKIEAGNEFKNIFGTPEFVAPE 202
Query: 466 VYSRRFGGVSHKSDVYSYGMM 486
+ + G+ ++D++S G++
Sbjct: 203 IVNYEPLGL--EADMWSIGVI 221
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 33/289 (11%)
Query: 284 RYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKN---SRCNGEEFINEVA 340
++S D K++ +F KL + GE++KG G + VKVLK S +F E
Sbjct: 3 KHSGIDFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 341 SISRTSHVNIVTFLGFCYENKKN--ALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIG 398
+ SH N++ LG C LI P GSL +H N ++ + A+
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALD 119
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKIS--DFGLAKQAQKKESAISMLHAR 456
ARG +LH + I + +++ +DED +IS D + Q+ + A +
Sbjct: 120 XARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPA----- 173
Query: 457 GTIGYIAPEVYSRRFGGVSHKS-DVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERI 515
++APE ++ + +S D +S+ +++ E+V D +++ I + E +
Sbjct: 174 ----WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFAD-LSNXEIGXKVALEGL 228
Query: 516 EPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLE 564
P + ++K+ + C +P++RP ++ +LE
Sbjct: 229 RP-------TIPPGISPHVSKLXKI----CXNEDPAKRPKFDXIVPILE 266
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 294 TKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTF 353
T ++ +G+G +GEV++G+ G+ VAVK+ + E+ H NI+ F
Sbjct: 5 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 63
Query: 354 LGFCYENKKNA------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
+ +NK N L+ + +GSL ++ N + +E M ++A+ A GL +LH
Sbjct: 64 I--AADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHLH 118
Query: 408 R---GCQVR--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML--HARGTIG 460
G Q + I H D+K +NIL+ ++ I+D GLA + I + H GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 461 YIAPEVYSRRFGGVSH-----KSDVYSYGMMIIEM 490
Y+APEV + H ++D+Y+ G++ E+
Sbjct: 179 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 26/272 (9%)
Query: 235 EFICYCPNGAYSSS-CHSRTVIQ---ALIKKKTREDDRNVE--AFIRNHESLAPKRYSY- 287
E++ + G+ SS HS T + A ++RE E + E L P Y Y
Sbjct: 30 EYLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYR 89
Query: 288 SDVKRMTKSFRDKLGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEVASISRTS 346
+V T R LG+G +GEV++ E G AVK ++ EE + + + +
Sbjct: 90 EEVHWATHQLR--LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM----ACAGLT 143
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
IV G E + EL+ GSL + + ++ E + +Y + + GLEYL
Sbjct: 144 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-KEQGCLPEDRALYYLGQAL-EGLEYL 201
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFC-PKISDFGLAKQAQKKESAISML---HARGTIGYI 462
H RI+H D+K N+LL D + DFG A Q S+L + GT ++
Sbjct: 202 H---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHM 258
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMV-GC 493
APEV R K DV+S M++ M+ GC
Sbjct: 259 APEVVLGR--SCDAKVDVWSSCCMMLHMLNGC 288
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVN 349
V R + + +G +G V+K +L + VAVK+ + E+ S H N
Sbjct: 12 VPRGSLQLLEIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIFSTPGMKHEN 70
Query: 350 IVTFLGFCYENKKNALIYELM------PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
++ F+ E + + L EL GSL ++ NI + W + +A ++RGL
Sbjct: 71 LLQFI--AAEKRGSNLEVELWLITAFHDKGSLTDYLKG--NI-ITWNELCHVAETMSRGL 125
Query: 404 EYLHR--------GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA 455
YLH G + I H D K +N+LL D ++DFGLA + + +
Sbjct: 126 SYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ 185
Query: 456 RGTIGYIAPEVYSRRFGGVSHKS------DVYSYGMMIIEMVGCTKNLDDEVTD 503
GT Y+APEV G ++ + D+Y+ G+++ E+V K D V +
Sbjct: 186 VGTRRYMAPEVLE---GAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 19/197 (9%)
Query: 300 KLGQGGYGEVYK-GELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+LG G G V+K P G ++A K+ L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + + ++ E M GSLD+ + + ++ + + +++I + +GL YL + +I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGGV- 474
D+KP NIL++ K+ DFG++ Q SM ++ GT Y++PE R G
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPE----RLQGTH 179
Query: 475 -SHKSDVYSYGMMIIEM 490
S +SD++S G+ ++EM
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 19/197 (9%)
Query: 300 KLGQGGYGEVYK-GELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+LG G G V+K P G ++A K+ L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + + ++ E M GSLD+ + + ++ + + +++I + +GL YL + +I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGGV- 474
D+KP NIL++ K+ DFG++ Q SM ++ GT Y++PE R G
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPE----RLQGTH 179
Query: 475 -SHKSDVYSYGMMIIEM 490
S +SD++S G+ ++EM
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 26/229 (11%)
Query: 268 RNVEAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYK-GELPDGQLVAVKV-- 324
+ +EAF+ + + D +++++ LG G G V+K P G ++A K+
Sbjct: 15 KRLEAFLTQKQKVG--ELKDDDFEKISE-----LGAGNGGVVFKVSHKPSGLVMARKLIH 67
Query: 325 LKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRN 384
L+ + I E+ + + IV F G Y + + ++ E M GSLD+ + +
Sbjct: 68 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KA 125
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
++ + + +++I + +GL YL + +I+H D+KP NIL++ K+ DFG++ Q
Sbjct: 126 GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183
Query: 445 KKESAISMLHA-RGTIGYIAPEVYSRRFGGV--SHKSDVYSYGMMIIEM 490
SM ++ GT Y++PE R G S +SD++S G+ ++EM
Sbjct: 184 D-----SMANSFVGTRSYMSPE----RLQGTHYSVQSDIWSMGLSLVEM 223
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 26/206 (12%)
Query: 300 KLGQGGYGEVYKG-ELPDG-QLVAVKVLKNSRCNGEE-----FINEVASISRTS---HVN 349
++G+G YG+V+K +L +G + VA+K ++ GEE I EVA + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 350 IVTFLGFCYENK-----KNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLE 404
+V C ++ K L++E + + L ++ + +T+ + + RGL+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 405 YLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAP 464
+LH R+VH D+KPQNIL+ K++DFGLA+ + + S++ T+ Y AP
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAP 188
Query: 465 EVYSRRFGGVSHKSDVYSYGMMIIEM 490
EV + + D++S G + EM
Sbjct: 189 EVLLQ--SSYATPVDLWSVGCIFAEM 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY E ++A+KVL ++ + EV S H NI+ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY--ITELANALSYCH---SKRVI 134
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL + KI+DFG + A GT+ Y+ PE+ R
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH--D 188
Query: 476 HKSDVYSYGMMIIE-MVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
K D++S G++ E +VG +T Y RI +F F TE + +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQET-------YRRIS-RVEFTFPDFVTEGARDL 240
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ N S+R ++ +VLE
Sbjct: 241 ISRL-------LKHNASQRLTLAEVLE 260
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 294 TKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTF 353
T ++ +G+G +GEV++G+ G+ VAVK+ + E+ H NI+ F
Sbjct: 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62
Query: 354 LGFCYENKKNA------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
+ +NK N L+ + +GSL ++ N + +E M ++A+ A GL +LH
Sbjct: 63 IA--ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHLH 117
Query: 408 R---GCQVR--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML--HARGTIG 460
G Q + I H D+K +NIL+ ++ I+D GLA + I + H GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 461 YIAPEVYSRRFGGVSH-----KSDVYSYGMMIIEM 490
Y+APEV + H ++D+Y+ G++ E+
Sbjct: 178 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 294 TKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTF 353
T ++ +G+G +GEV++G+ G+ VAVK+ + E+ H NI+ F
Sbjct: 7 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 65
Query: 354 LGFCYENKKNA------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
+ +NK N L+ + +GSL ++ N + +E M ++A+ A GL +LH
Sbjct: 66 I--AADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHLH 120
Query: 408 R---GCQVR--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML--HARGTIG 460
G Q + I H D+K +NIL+ ++ I+D GLA + I + H GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 461 YIAPEVYSRRFGGVSH-----KSDVYSYGMMIIEM 490
Y+APEV + H ++D+Y+ G++ E+
Sbjct: 181 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 294 TKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTF 353
T ++ +G+G +GEV++G+ G+ VAVK+ + E+ H NI+ F
Sbjct: 30 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 88
Query: 354 LGFCYENKKNA------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
+ +NK N L+ + +GSL ++ N + +E M ++A+ A GL +LH
Sbjct: 89 I--AADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHLH 143
Query: 408 R---GCQVR--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML--HARGTIG 460
G Q + I H D+K +NIL+ ++ I+D GLA + I + H GT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 461 YIAPEVYSRRFGGVSH-----KSDVYSYGMMIIEM 490
Y+APEV + H ++D+Y+ G++ E+
Sbjct: 204 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 237
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 25/209 (11%)
Query: 295 KSFRDKLGQ-GGYGEVYKGELPDGQ-LVAVKVLKN-SRCNGEEFINEVASISRTSHVNIV 351
+ F + +G+ G +G+VYK + + L A KV+ S E+++ E+ ++ H NIV
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 352 TFL-GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWK-TMYQIAIGIARGLEYLHRG 409
L F YEN LI E G++D + ++LE T QI + + L+ L+
Sbjct: 71 KLLDAFYYENNLWILI-EFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYL 124
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-----AQKKESAISMLHARGTIGYIAP 464
+I+H D+K NIL D K++DFG++ + Q+++S I GT ++AP
Sbjct: 125 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI------GTPYWMAP 178
Query: 465 EVY---SRRFGGVSHKSDVYSYGMMIIEM 490
EV + + +K+DV+S G+ +IEM
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 19/197 (9%)
Query: 300 KLGQGGYGEVYK-GELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+LG G G V+K P G ++A K+ L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + + ++ E M GSLD+ + + ++ + + +++I + +GL YL + +I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGGV- 474
D+KP NIL++ K+ DFG++ Q SM ++ GT Y++PE R G
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPE----RLQGTH 179
Query: 475 -SHKSDVYSYGMMIIEM 490
S +SD++S G+ ++EM
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 19/197 (9%)
Query: 300 KLGQGGYGEVYK-GELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+LG G G V+K P G ++A K+ L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + + ++ E M GSLD+ + + ++ + + +++I + +GL YL + +I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHA-RGTIGYIAPEVYSRRFGGV- 474
D+KP NIL++ K+ DFG++ Q SM ++ GT Y++PE R G
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPE----RLQGTH 179
Query: 475 -SHKSDVYSYGMMIIEM 490
S +SD++S G+ ++EM
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 31/267 (11%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVK-----VLKNSRCNGEEFINEVASISRTSHVNIVTFL 354
LG+G +G+V GQ VA+K VL S G E++ + H +I+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 79
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ E N D + D+ + E + +Q I +EY HR +I
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRH---KI 133
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
VH D+KP+N+LLDE KI+DFGL+ + + G+ Y APEV S +
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVISGKLYA- 189
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G+++ M+ DDE ++++ I G + + +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-YTLPKFLSPGAAGL 242
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
K M++V NP R S+H++++
Sbjct: 243 IKRMLIV-------NPLNRISIHEIMQ 262
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 294 TKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTF 353
T ++ +G+G +GEV++G+ G+ VAVK+ + E+ H NI+ F
Sbjct: 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 101
Query: 354 LGFCYENKKNA------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
+ +NK N L+ + +GSL ++ N + +E M ++A+ A GL +LH
Sbjct: 102 I--AADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHLH 156
Query: 408 R---GCQVR--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML--HARGTIG 460
G Q + I H D+K +NIL+ ++ I+D GLA + I + H GT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 461 YIAPEVYSRRFGGVSH-----KSDVYSYGMMIIEM 490
Y+APEV + H ++D+Y+ G++ E+
Sbjct: 217 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 294 TKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTF 353
T ++ +G+G +GEV++G+ G+ VAVK+ + E+ H NI+ F
Sbjct: 10 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 68
Query: 354 LGFCYENKKNA------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
+ +NK N L+ + +GSL ++ N + +E M ++A+ A GL +LH
Sbjct: 69 I--AADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHLH 123
Query: 408 R---GCQVR--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML--HARGTIG 460
G Q + I H D+K +NIL+ ++ I+D GLA + I + H GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 461 YIAPEVYSRRFGGVSH-----KSDVYSYGMMIIEM 490
Y+APEV + H ++D+Y+ G++ E+
Sbjct: 184 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 217
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 32/265 (12%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGE----EFINEVASISRTSHVNIVTFLG 355
LG+G +G VY E +VA+KVL S+ E + E+ + H NI+
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ Y+ ++ LI E P G L K + ++ + + I +A L Y H +++
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYCHGK---KVI 145
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL KI+DFG + A ++ GT+ Y+ PE+ R +
Sbjct: 146 HRDIKPENLLLGLKGELKIADFGWSVHA----PSLRRKTMCGTLDYLPPEMIEGRMH--N 199
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDG-VATEEEKKI 534
K D++ G++ E++ + S HN Y RI D +F V T + I
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFE------SASHNETYRRIV-KVDLKFPASVPTGAQDLI 252
Query: 535 AKMMILVGFWCIQTNPSERPSMHKV 559
+K++ + NPSER + +V
Sbjct: 253 SKLL--------RHNPSERLPLAQV 269
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 26/206 (12%)
Query: 300 KLGQGGYGEVYKG-ELPDG-QLVAVKVLKNSRCNGEE-----FINEVASISRTS---HVN 349
++G+G YG+V+K +L +G + VA+K ++ GEE I EVA + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 350 IVTFLGFCYENK-----KNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLE 404
+V C ++ K L++E + + L ++ + +T+ + + RGL+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 405 YLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAP 464
+LH R+VH D+KPQNIL+ K++DFGLA+ + + S++ T+ Y AP
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAP 188
Query: 465 EVYSRRFGGVSHKSDVYSYGMMIIEM 490
EV + + D++S G + EM
Sbjct: 189 EVLLQ--SSYATPVDLWSVGCIFAEM 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 31/267 (11%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVK-----VLKNSRCNGEEFINEVASISRTSHVNIVTFL 354
LG+G +G+V GQ VA+K VL S G E++ + H +I+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 70
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ E N D + D+ + E + +Q I +EY HR +I
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRH---KI 124
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
VH D+KP+N+LLDE KI+DFGL+ + + G+ Y APEV S +
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVISGKLYA- 180
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G+++ M+ DDE ++++ I G + + +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-YTLPKFLSPGAAGL 233
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
K M++V NP R S+H++++
Sbjct: 234 IKRMLIV-------NPLNRISIHEIMQ 253
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 279 SLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEE--- 334
S AP S +R+TK LG+G YGEVYK + + VA+K + R EE
Sbjct: 25 SAAPSATSIDRYRRITK-----LGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGV 76
Query: 335 ---FINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKT 391
I EV+ + H NI+ + N + LI+E N L K++ D+N + +
Sbjct: 77 PGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM--DKNPDVSMRV 133
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCP--KISDFGLAKQAQKK 446
+ + G+ + H R +H D+KPQN+LL D P KI DFGLA+
Sbjct: 134 IKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190
Query: 447 ESAISMLHARGTIGYIAPEVY--SRRFGGVSHKSDVYSYGMMIIEMVGCT 494
+ H T+ Y PE+ SR + S D++S + EM+ T
Sbjct: 191 IRQFT--HEIITLWYRPPEILLGSRHY---STSVDIWSIACIWAEMLMKT 235
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 301 LGQGGYGEVYK-GELPDGQLVAVKVLKNS---RCNGEEFIN-EVASISRTSHVNIVTFLG 355
LG G +G V+ +G+ A+KVLK R E N E +S +H I+ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ +I + + G L + + Y + +A LEYLH I+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA--LEYLHSK---DII 128
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+KP+NILLD++ KI+DFG AK + GT YIAPEV S + +
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTK--PYN 181
Query: 476 HKSDVYSYGMMIIEMVG 492
D +S+G++I EM+
Sbjct: 182 KSIDWWSFGILIYEMLA 198
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFIN----EVASISRTSHVNIVTFLG 355
LG+G +G+V+ E Q A+K LK ++ + E +S +T +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 356 FCYENKKNAL-IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
++ K+N + E + G L I + L T Y A I GL++LH I
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHSKG---I 139
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ D+K NILLD+D KI+DFG+ K+ ++ + GT YIAPE+ +
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC--GTPDYIAPEILLGQ--KY 195
Query: 475 SHKSDVYSYGMMIIEMV 491
+H D +S+G+++ EM+
Sbjct: 196 NHSVDWWSFGVLLYEML 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 31/267 (11%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVK-----VLKNSRCNGEEFINEVASISRTSHVNIVTFL 354
LG+G +G+V GQ VA+K VL S G E++ + H +I+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 80
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ E N D + D+ + E + +Q I +EY HR +I
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRH---KI 134
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
VH D+KP+N+LLDE KI+DFGL+ + + G+ Y APEV S +
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVISGKLYA- 190
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G+++ M+ DDE ++++ I G + + +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-YTLPKFLSPGAAGL 243
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
K M++V NP R S+H++++
Sbjct: 244 IKRMLIV-------NPLNRISIHEIMQ 263
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 17/196 (8%)
Query: 300 KLGQGGYGEVYK-GELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+LG G G V+K P G ++A K+ L+ + I E+ + + IV F G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
Y + + ++ E M GSLD+ + + ++ + + +++I + +GL YL + +I+H
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMH 131
Query: 417 FDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV-- 474
D+KP NIL++ K+ DFG++ Q E A + GT Y++PE R G
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDEMANEFV---GTRSYMSPE----RLQGTHY 183
Query: 475 SHKSDVYSYGMMIIEM 490
S +SD++S G+ ++EM
Sbjct: 184 SVQSDIWSMGLSLVEM 199
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 31/267 (11%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVK-----VLKNSRCNGEEFINEVASISRTSHVNIVTFL 354
LG+G +G+V GQ VA+K VL S G E++ + H +I+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 74
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ E N D + D+ + E + +Q I +EY HR +I
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRH---KI 128
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
VH D+KP+N+LLDE KI+DFGL+ + + G+ Y APEV S +
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVISGKLYA- 184
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKI 534
+ DV+S G+++ M+ DDE ++++ I G + + +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-YTLPKFLSPGAAGL 237
Query: 535 AKMMILVGFWCIQTNPSERPSMHKVLE 561
K M++V NP R S+H++++
Sbjct: 238 IKRMLIV-------NPLNRISIHEIMQ 257
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 26/206 (12%)
Query: 300 KLGQGGYGEVYKG-ELPDG-QLVAVKVLKNSRCNGEE-----FINEVASISRTS---HVN 349
++G+G YG+V+K +L +G + VA+K ++ GEE I EVA + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 350 IVTFLGFCYENK-----KNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLE 404
+V C ++ K L++E + + L ++ + +T+ + + RGL+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 405 YLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAP 464
+LH R+VH D+KPQNIL+ K++DFGLA+ + + S++ T+ Y AP
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAP 188
Query: 465 EVYSRRFGGVSHKSDVYSYGMMIIEM 490
EV + + D++S G + EM
Sbjct: 189 EVLLQ--SSYATPVDLWSVGCIFAEM 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 30/266 (11%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNG----EEFINEVASISRTSHVNIVTFLG 355
LG+G +G VY E ++A+KVL ++ + EV S H NI+ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ + LI E P G++ + + + Y +A L Y H R++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY--ITELANALSYCH---SKRVI 134
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+LL + KI+DFG + A GT+ Y+ PE+ R
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMH--D 188
Query: 476 HKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIA 535
K D++S G++ E + + + Y RI +F F TE + +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQET------YRRIS-RVEFTFPDFVTEGARDLI 241
Query: 536 KMMILVGFWCIQTNPSERPSMHKVLE 561
+ ++ N S+R ++ +VLE
Sbjct: 242 SRL-------LKHNASQRLTLAEVLE 260
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 289 DVKRMTKSFRDK-LGQGGYGEVYK-GELPDGQLVAVKVLKNSRC----NGEEFINEVASI 342
D + M + R + LG+GG+ + Y+ ++ ++ A KV+ S E+ E+A
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARG 402
+ ++V F GF ++ ++ E+ SL + +H R E + Y + I +G
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-QG 154
Query: 403 LEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
++YLH R++H D+K N+ L++D KI DFGLA + + L GT YI
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC--GTPNYI 209
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
APEV ++ G S + D++S G ++ ++
Sbjct: 210 APEVLCKK--GHSFEVDIWSLGCILYTLL 236
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 289 DVKRMTKSFRDK-LGQGGYGEVYK-GELPDGQLVAVKVLKNSRC----NGEEFINEVASI 342
D + M + R + LG+GG+ + Y+ ++ ++ A KV+ S E+ E+A
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARG 402
+ ++V F GF ++ ++ E+ SL + +H R E + Y + I +G
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-QG 154
Query: 403 LEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
++YLH R++H D+K N+ L++D KI DFGLA + + L GT YI
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC--GTPNYI 209
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
APEV ++ G S + D++S G ++ ++
Sbjct: 210 APEVLCKK--GHSFEVDIWSLGCILYTLL 236
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFIN----EVASISRTSHVNIVTFLG 355
LG+G +G+V+ E Q A+K LK ++ + E +S +T +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 356 FCYENKKNAL-IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
++ K+N + E + G L I + L T Y A I GL++LH I
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHSKG---I 140
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ D+K NILLD+D KI+DFG+ K+ ++ + GT YIAPE+ +
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC--GTPDYIAPEILLGQ--KY 196
Query: 475 SHKSDVYSYGMMIIEMV 491
+H D +S+G+++ EM+
Sbjct: 197 NHSVDWWSFGVLLYEML 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 352 TFLGFCYENKKNALIYEL--MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-R 408
L FC+++ + L + L NG L K+I + Y I LEYLH +
Sbjct: 101 K-LYFCFQDDEK-LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGK 156
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
G I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ +
Sbjct: 157 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVG 492
+ SD+++ G +I ++V
Sbjct: 213 EK--SACKSSDLWALGCIIYQLVA 234
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 296 SFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKN--SRCNGEEFINEVASISRTSHVNIVT 352
+++LG GG+G V + D G+ VA+K + S N E + E+ + + +H N+V+
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 353 F------LGFCYENKKNALIYELMPNGSLDKFIHNDRNI-KLEWKTMYQIAIGIARGLEY 405
L N L E G L K+++ N L+ + + I+ L Y
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 406 LHRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
LH RI+H D+KP+NI+L + KI D G AK+ + E + GT+ Y+
Sbjct: 137 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYL 190
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
APE+ ++ V+ D +S+G + E +
Sbjct: 191 APELLEQKKYTVT--VDYWSFGTLAFECI 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 296 SFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKN--SRCNGEEFINEVASISRTSHVNIVT 352
+++LG GG+G V + D G+ VA+K + S N E + E+ + + +H N+V+
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 353 F------LGFCYENKKNALIYELMPNGSLDKFIHNDRNI-KLEWKTMYQIAIGIARGLEY 405
L N L E G L K+++ N L+ + + I+ L Y
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 406 LHRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
LH RI+H D+KP+NI+L + KI D G AK+ + E + GT+ Y+
Sbjct: 138 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYL 191
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
APE+ ++ V+ D +S+G + E +
Sbjct: 192 APELLEQKKYTVT--VDYWSFGTLAFECI 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 120/272 (44%), Gaps = 26/272 (9%)
Query: 235 EFICYCPNGAYSSS-CHSRTVIQ---ALIKKKTREDDRNVE--AFIRNHESLAPKRYSY- 287
E++ + G+ SS HS T + A ++RE E + E L P Y Y
Sbjct: 11 EYLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYR 70
Query: 288 SDVKRMTKSFRDKLGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEVASISRTS 346
+V T R LG+G +GEV++ E G AVK ++ EE + + + +
Sbjct: 71 EEVHWATHQLR--LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM----ACAGLT 124
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
IV G E + EL+ GSL + + ++ E + +Y + + GLEYL
Sbjct: 125 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-KEQGCLPEDRALYYLGQAL-EGLEYL 182
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFC-PKISDFGLAKQAQKKESAISML---HARGTIGYI 462
H RI+H D+K N+LL D + DFG A Q +L + GT ++
Sbjct: 183 H---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHM 239
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMV-GC 493
APEV R K DV+S M++ M+ GC
Sbjct: 240 APEVVLGR--SCDAKVDVWSSCCMMLHMLNGC 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 289 DVKRMTKSFRDK-LGQGGYGEVYK-GELPDGQLVAVKVLKNSRC----NGEEFINEVASI 342
D + M + R + LG+GG+ + Y+ ++ ++ A KV+ S E+ E+A
Sbjct: 21 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 80
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARG 402
+ ++V F GF ++ ++ E+ SL + +H R E + Y + I +G
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-QG 138
Query: 403 LEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ----AQKKESAISMLHARGT 458
++YLH R++H D+K N+ L++D KI DFGLA + ++K+ GT
Sbjct: 139 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC------GT 189
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
YIAPEV ++ G S + D++S G ++ ++
Sbjct: 190 PNYIAPEVLCKK--GHSFEVDIWSLGCILYTLL 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 299 DKLGQGGYGEVYKG-ELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+K+G+G +GEV+KG + ++VA+K+ L+ + E+ E+ +S+ + + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ K +I E + GS + L+ + I I +GL+YLH + +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKI 141
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIK N+LL E K++DFG+A Q ++ I GT ++APEV +
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAYD 197
Query: 476 HKSDVYSYGMMIIEMV 491
K+D++S G+ IE+
Sbjct: 198 SKADIWSLGITAIELA 213
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
+G+G +G+V + D ++ A+K + +C E+ + H +V L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN-LW 81
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++++++ ++ +L+ G L H +N+ + +T+ + L+YL RI
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKEETVKLFICELVMALDYLQNQ---RI 136
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG-G 473
+H D+KP NILLDE I+DF +A ++ +M GT Y+APE++S R G G
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA---GTKPYMAPEMFSSRKGAG 193
Query: 474 VSHKSDVYSYGMMIIEMV 491
S D +S G+ E++
Sbjct: 194 YSFAVDWWSLGVTAYELL 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 299 DKLGQGGYGEVYKG-ELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+K+G+G +GEV+KG + ++VA+K+ L+ + E+ E+ +S+ + + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ K +I E + GS + L+ + I I +GL+YLH ++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKI--- 126
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIK N+LL E K++DFG+A Q ++ I GT ++APEV +
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAYD 182
Query: 476 HKSDVYSYGMMIIEM 490
K+D++S G+ IE+
Sbjct: 183 SKADIWSLGITAIEL 197
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 289 DVKRMTKSFRDK-LGQGGYGEVYK-GELPDGQLVAVKVLKNSRC----NGEEFINEVASI 342
D + M + R + LG+GG+ + Y+ ++ ++ A KV+ S E+ E+A
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 343 SRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARG 402
+ ++V F GF ++ ++ E+ SL + +H R E + Y + I +G
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-QG 154
Query: 403 LEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ----AQKKESAISMLHARGT 458
++YLH R++H D+K N+ L++D KI DFGLA + ++K+ GT
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC------GT 205
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
YIAPEV ++ G S + D++S G ++ ++
Sbjct: 206 PNYIAPEVLCKK--GHSFEVDIWSLGCILYTLL 236
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 292 RMTKSFRDKLGQGGYGEVYKG------ELPDGQLVAVKVLKNSRCNGEE--FINEVASIS 343
R F LG G +G+V + VAVK+LK + E ++E+ ++
Sbjct: 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT 103
Query: 344 RT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQ-------- 394
+ SH NIV LG C + LI+E G L ++ + R E + Y+
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 395 -------------IAIGIARGLEYLH-RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLA 440
A +A+G+E+L + C VH D+ +N+L+ KI DFGLA
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 441 KQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV-SHKSDVYSYGMMIIEMVGCTKN 496
+ + + +AR + ++APE F G+ + KSDV+SYG+++ E+ N
Sbjct: 220 RDIMSDSNYVVRGNARLPVKWMAPE---SLFEGIYTIKSDVWSYGILLWEIFSLGVN 273
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 299 DKLGQGGYGEVYKG-ELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+K+G+G +GEV+KG + ++VA+K+ L+ + E+ E+ +S+ + + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ K +I E + GS + L+ + I I +GL+YLH ++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKI--- 126
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIK N+LL E K++DFG+A Q ++ I GT ++APEV +
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAYD 182
Query: 476 HKSDVYSYGMMIIEM 490
K+D++S G+ IE+
Sbjct: 183 SKADIWSLGITAIEL 197
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 297 FRDKLGQGGYGEVYKGE-LPDGQLVAVK-VLKNSRCNGEEFINEVASISRTSHVNIVTFL 354
F KLG+GG+ V E L DG A+K +L + + + EE E +H NI+ +
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 355 GFCYENK----KNALIYELMPNGSLDKFIH--NDRNIKLEWKTMYQIAIGIARGLEYLH- 407
+C + + L+ G+L I D+ L + + +GI RGLE +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQA----QKKESAISM---LHARGTIG 460
+G H D+KP NILL ++ P + D G QA + A+++ R TI
Sbjct: 153 KG----YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 461 YIAPEVYS-RRFGGVSHKSDVYSYGMMIIEMV 491
Y APE++S + + ++DV+S G ++ M+
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 32/250 (12%)
Query: 321 AVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFI 379
AVKV+ S+ + E I + + H NI+T + K L+ ELM G L DK +
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 380 HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNIL-LDEDF---CPKIS 435
R + + I + +EYLH +VH D+KP NIL +DE C +I
Sbjct: 114 ---RQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRIC 167
Query: 436 DFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTK 495
DFG AKQ + E+ + M T ++APEV R+ G D++S G+++ M+
Sbjct: 168 DFGFAKQL-RAENGLLMTPCY-TANFVAPEVLKRQ--GYDEGCDIWSLGILLYTMLAGYT 223
Query: 496 NLDDEVTDTSICHNLIYERIEPGNDFQFDG----VATEEEKKIAKMMILVGFWCIQTNPS 551
+ +DT I RI G F G +E K + M+ V +P
Sbjct: 224 PFANGPSDTP---EEILTRIGSGK-FTLSGGNWNTVSETAKDLVSKMLHV-------DPH 272
Query: 552 ERPSMHKVLE 561
+R + +VL+
Sbjct: 273 QRLTAKQVLQ 282
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 297 FRDKLGQGGYGEVY-KGELPDGQLVAVKVLKNSRCN--GEEFINEVASISRTSHVNIVTF 353
F+ KLG G +G+V+ E G +K + R E+ E+ + H NI+
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 354 LGFCYENKKNALIYELMPNGSLDKFI--HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
+ ++ E G L + I R L + ++ + L Y H
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-- 143
Query: 412 VRIVHFDIKPQNILLDEDFCP----KISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
+VH D+KP+NIL +D P KI DFGLA+ + E + + A GT Y+APEV+
Sbjct: 144 -HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTN---AAGTALYMAPEVF 198
Query: 468 SRRFGGVSHKSDVYSYG-MMIIEMVGC 493
R V+ K D++S G +M + GC
Sbjct: 199 KR---DVTFKCDIWSAGVVMYFLLTGC 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 299 DKLGQGGYGEVYKG-ELPDGQLVAVKV--LKNSRCNGEEFINEVASISRTSHVNIVTFLG 355
+K+G+G +GEV+KG + ++VA+K+ L+ + E+ E+ +S+ + + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ K +I E + GS + L+ + I I +GL+YLH + +
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKI 146
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIK N+LL E K++DFG+A Q ++ I GT ++APEV +
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAYD 202
Query: 476 HKSDVYSYGMMIIEM 490
K+D++S G+ IE+
Sbjct: 203 SKADIWSLGITAIEL 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 32/250 (12%)
Query: 321 AVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFI 379
AVKV+ S+ + E I + + H NI+T + K L+ ELM G L DK +
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 380 HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNIL-LDEDF---CPKIS 435
+ E + I + +EYLH +VH D+KP NIL +DE C +I
Sbjct: 114 RQKFFSEREASFVLHT---IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRIC 167
Query: 436 DFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTK 495
DFG AKQ + E+ + M T ++APEV R+ G D++S G+++ M+
Sbjct: 168 DFGFAKQL-RAENGLLMTPCY-TANFVAPEVLKRQ--GYDEGCDIWSLGILLYTMLAGYT 223
Query: 496 NLDDEVTDTSICHNLIYERIEPGNDFQFDG----VATEEEKKIAKMMILVGFWCIQTNPS 551
+ +DT I RI G F G +E K + M+ V +P
Sbjct: 224 PFANGPSDTP---EEILTRIGSGK-FTLSGGNWNTVSETAKDLVSKMLHV-------DPH 272
Query: 552 ERPSMHKVLE 561
+R + +VL+
Sbjct: 273 QRLTAKQVLQ 282
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 301 LGQGGYGEVYKGEL-PDGQLVA---VKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
LG+GG+GEV+ ++ G+L A + + + G + I H + L +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 357 CYENKKNA-LIYELMPNGSLDKFIHN---DRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+E K + L+ +M G + I+N D E + ++ A I GLE+LH Q
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLH---QR 308
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLA---KQAQKKESAISMLHARGTIGYIAPEVYSR 469
I++ D+KP+N+LLD+D +ISD GLA K Q K + GT G++APE+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPELLLG 363
Query: 470 RFGGVSHKSDVYSYGMMIIEMVGC 493
D ++ G+ + EM+
Sbjct: 364 E--EYDFSVDYFALGVTLYEMIAA 385
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 38/283 (13%)
Query: 293 MTKSFR--DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT-S 346
MT ++ ++LG+G + V + ++P GQ A K++ + + + + A I R
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
H NIV E + L+++L+ G L + I + E+ + + I + LE +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESV 116
Query: 407 HRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
+ IVH D+KP+N+LL + K++DFGLA + Q + A GT GY++
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA--WFGFAGTPGYLS 174
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-DF 521
PEV + G D+++ G+++ I +VG D++ + +Y++I+ G DF
Sbjct: 175 PEVLRKDPYG--KPVDMWACGVILYILLVGYPPFWDED-------QHRLYQQIKAGAYDF 225
Query: 522 ---QFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
++D V E + I KM+ + NP++R + + L+
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTI--------NPAKRITASEALK 260
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 152
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
S SD+++ G +I ++V
Sbjct: 210 --SASKSSDLWALGCIIYQLVA 229
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 301 LGQGGYGEVYKGELP--DGQLV--AVKVLKN---SRCNGEEFINEVASISRTSHVNIVTF 353
LG+G +G V + +L DG V AVK+LK + + EEF+ E A + H ++
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 354 LGFCYENKKNA------LIYELMPNGSLDKFIHNDR----NIKLEWKTMYQIAIGIARGL 403
+G ++ +I M +G L F+ R L +T+ + + IA G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
EYL +H D+ +N +L ED ++DFGL+++ + ++ + ++A
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQF 523
E + V SDV+++G+ + E++ T+ + I + IY + GN +
Sbjct: 208 LESLADNLYTV--HSDVWAFGVTMWEIM--TRG---QTPYAGIENAEIYNYLIGGNRLKQ 260
Query: 524 DGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEMLEGSIENLQI 572
EE + +M + C +P +RPS + LE + +L +
Sbjct: 261 PPECMEE---VYDLM----YQCWSADPKQRPSFTCLRMELENILGHLSV 302
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 301 LGQGGYGEVYKGEL-PDGQLVA---VKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
LG+GG+GEV+ ++ G+L A + + + G + I H + L +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 357 CYENKKNA-LIYELMPNGSLDKFIHN---DRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+E K + L+ +M G + I+N D E + ++ A I GLE+LH Q
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLH---QR 308
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLA---KQAQKKESAISMLHARGTIGYIAPEVYSR 469
I++ D+KP+N+LLD+D +ISD GLA K Q K + GT G++APE+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPELLLG 363
Query: 470 RFGGVSHKSDVYSYGMMIIEMVGC 493
D ++ G+ + EM+
Sbjct: 364 E--EYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 301 LGQGGYGEVYKGEL-PDGQLVA---VKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
LG+GG+GEV+ ++ G+L A + + + G + I H + L +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 357 CYENKKNA-LIYELMPNGSLDKFIHN---DRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+E K + L+ +M G + I+N D E + ++ A I GLE+LH Q
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLH---QR 308
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLA---KQAQKKESAISMLHARGTIGYIAPEVYSR 469
I++ D+KP+N+LLD+D +ISD GLA K Q K + GT G++APE+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPELLLG 363
Query: 470 RFGGVSHKSDVYSYGMMIIEMVGC 493
D ++ G+ + EM+
Sbjct: 364 E--EYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 301 LGQGGYGEVYKGEL-PDGQLVA---VKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
LG+GG+GEV+ ++ G+L A + + + G + I H + L +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 357 CYENKKNA-LIYELMPNGSLDKFIHN---DRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+E K + L+ +M G + I+N D E + ++ A I GLE+LH Q
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLH---QR 308
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLA---KQAQKKESAISMLHARGTIGYIAPEVYSR 469
I++ D+KP+N+LLD+D +ISD GLA K Q K + GT G++APE+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPELLLG 363
Query: 470 RFGGVSHKSDVYSYGMMIIEMVGC 493
D ++ G+ + EM+
Sbjct: 364 E--EYDFSVDYFALGVTLYEMIAA 385
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 124/309 (40%), Gaps = 58/309 (18%)
Query: 292 RMTKSFRDKLGQGGYGEVYKGEL-----PDGQL-VAVKVLKNSRCNGEE--FINEVASIS 343
R F LG G +G+V + D L VAVK+LK++ E+ ++E+ +S
Sbjct: 30 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 89
Query: 344 RT-SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIH---------------------N 381
H NIV LG C +I E G L F+
Sbjct: 90 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 382 DRNIKLEWKTMYQIAIGIARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLA 440
+ LE + + + +A+G+ +L + C +H D+ +N+LL KI DFGLA
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLA 205
Query: 441 KQAQKKESAISMLHARGTIGYIAPE-----VYSRRFGGVSHKSDVYSYGMMIIEMVGCTK 495
+ + I +AR + ++APE VY+ +SDV+SYG+++ E+
Sbjct: 206 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV-------QSDVWSYGILLWEIFSLGL 258
Query: 496 NLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPS 555
N + S + L+ DG + K + + C P+ RP+
Sbjct: 259 NPYPGILVNSKFYKLVK-----------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 307
Query: 556 MHKVLEMLE 564
++ L+
Sbjct: 308 FQQICSFLQ 316
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 38/283 (13%)
Query: 293 MTKSFR--DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT-S 346
MT ++ + +G+G + V + +L G A K++ + + + + A I R
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
H NIV E + L+++L+ G L + I + E+ + + I + LE +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAV 116
Query: 407 HRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
Q+ +VH D+KP+N+LL + K++DFGLA + Q + A GT GY++
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA--WFGFAGTPGYLS 174
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-DF 521
PEV + G D+++ G+++ I +VG D++ + +Y++I+ G DF
Sbjct: 175 PEVLRKEAYG--KPVDIWACGVILYILLVGYPPFWDED-------QHKLYQQIKAGAYDF 225
Query: 522 ---QFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
++D V E + I +M+ + NP++R + H+ L+
Sbjct: 226 PSPEWDTVTPEAKNLINQMLTI--------NPAKRITAHEALK 260
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 38/283 (13%)
Query: 293 MTKSFR--DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT-S 346
MT ++ ++LG+G + V + ++P GQ A K++ + + + + A I R
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
H NIV E + L+++L+ G L + I + E+ + + I + LE +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESV 116
Query: 407 HRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
+ IVH D+KP+N+LL + K++DFGLA + Q + A GT GY++
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA--WFGFAGTPGYLS 174
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-DF 521
PEV + G D+++ G+++ I +VG D++ + +Y++I+ G DF
Sbjct: 175 PEVLRKDPYG--KPVDMWACGVILYILLVGYPPFWDED-------QHRLYQQIKAGAYDF 225
Query: 522 ---QFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
++D V E + I KM+ + NP++R + + L+
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTI--------NPAKRITASEALK 260
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 36/275 (13%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT-SHVNIVTFL 354
++LG+G + V + ++ GQ A K++ + + + + A I R H NIV
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
E + LI++L+ G L + I + E+ + + I + LE + Q+ +
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 415 VHFDIKPQNILLDEDF---CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
VH D+KP+N+LL K++DFGLA + + ++ A GT GY++PEV +
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA--WFGFAGTPGYLSPEVLRKDP 200
Query: 472 GGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-DF---QFDGV 526
G D+++ G+++ I +VG D++ + +Y++I+ G DF ++D V
Sbjct: 201 YG--KPVDLWACGVILYILLVGYPPFWDED-------QHRLYQQIKAGAYDFPSPEWDTV 251
Query: 527 ATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
E + I KM+ + NPS+R + + L+
Sbjct: 252 TPEAKDLINKMLTI--------NPSKRITAAEALK 278
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVK-VLKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
++LG G +G V++ E G A K V+ + E E+ ++S H +V
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
++ + +IYE M G L + + ++ N K+ + + +GL ++H VH
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHEN---NYVH 278
Query: 417 FDIKPQNILLDEDFCP--KISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
D+KP+NI+ K+ DFGL K+S GT + APEV + V
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGK--PV 333
Query: 475 SHKSDVYSYGMM-IIEMVGCT----KNLDDEVTDTSICH-NLIYERIEPGNDFQFDGVAT 528
+ +D++S G++ I + G + +N D+ + + C N+ +D F G++
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM--------DDSAFSGISE 385
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ + I K+++ +P+ R ++H+ LE
Sbjct: 386 DGKDFIRKLLL--------ADPNTRMTIHQALE 410
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 291 KRMTKSFRDKLGQGGYGEVY-----KGELPDGQLVAVKVLKNSRCNGEE---FINEVASI 342
KR K RD LG+G +G+V G++VAVK LK + C + + E+ +
Sbjct: 13 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCGPQHRSGWKQEIDIL 70
Query: 343 SRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIA 400
H +I+ + G C + K L+ E +P GSL ++ +I L ++ A I
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLF--AQQIC 127
Query: 401 RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH-ARGTI 459
G+ YLH +H ++ +N+LLD D KI DFGLAK + + +
Sbjct: 128 EGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 460 GYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ APE + SDV+S+G+ + E++
Sbjct: 185 FWYAPECLKEY--KFYYASDVWSFGVTLYELL 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVRI 414
+++K NG L K+I + Y I LEYLH +G I
Sbjct: 78 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG----I 131
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SA 189
Query: 475 SHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 190 CKSSDLWALGCIIYQLVA 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNS---RCNGEEFINEVASISRTSHVNIVTFLGF 356
+G+G YG V K D G++VA+K S + + + E+ + + H N+V L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 357 CYENKKNALIYELMPNGSLD--KFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
C + K+ L++E + + LD + N + ++ K ++QI GI G + H I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI--GFCHSHN-----I 145
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H DIKP+NIL+ + K+ DFG A+ T Y APE+ G V
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD--DEVATRWYRAPELL---VGDV 200
Query: 475 SHKS--DVYSYGMMIIEMVGCTKNLD-----DEVTDTSIC-HNLIYERIEPGN-DFQFDG 525
+ DV++ G ++ EM D++ +C NLI E N + F G
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 526 VATEEEK----------KIAKMMILVGFWCIQTNPSERP 554
V E K K+++++I + C+ +P +RP
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 291 KRMTKSFRDKLGQGGYGEVY-----KGELPDGQLVAVKVLKNSRCNGEE---FINEVASI 342
KR K RD LG+G +G+V G++VAVK LK + C + + E+ +
Sbjct: 13 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCGPQHRSGWKQEIDIL 70
Query: 343 SRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIA 400
H +I+ + G C + K L+ E +P GSL ++ +I L ++ A I
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLF--AQQIC 127
Query: 401 RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH-ARGTI 459
G+ YLH +H ++ +N+LLD D KI DFGLAK + + +
Sbjct: 128 EGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 460 GYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ APE + SDV+S+G+ + E++
Sbjct: 185 FWYAPECLKEY--KFYYASDVWSFGVTLYELL 214
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVRI 414
+++K NG L K+I + Y I LEYLH +G I
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG----I 128
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SA 186
Query: 475 SHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 187 CKSSDLWALGCIIYQLVA 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVRI 414
+++K NG L K+I + Y I LEYLH +G I
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG----I 129
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SA 187
Query: 475 SHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 188 CKSSDLWALGCIIYQLVA 205
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVK-VLKNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
++LG G +G V++ E G A K V+ + E E+ ++S H +V
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 357 CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVH 416
++ + +IYE M G L + + ++ N K+ + + +GL ++H VH
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHEN---NYVH 172
Query: 417 FDIKPQNILLDEDFCP--KISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
D+KP+NI+ K+ DFGL K+S GT + APEV + V
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGK--PV 227
Query: 475 SHKSDVYSYGMM-IIEMVGCT----KNLDDEVTDTSICH-NLIYERIEPGNDFQFDGVAT 528
+ +D++S G++ I + G + +N D+ + + C N+ +D F G++
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM--------DDSAFSGISE 279
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ + I K+++ +P+ R ++H+ LE
Sbjct: 280 DGKDFIRKLLL--------ADPNTRMTIHQALE 304
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVRI 414
+++K NG L K+I + Y I LEYLH +G I
Sbjct: 77 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG----I 130
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SA 188
Query: 475 SHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 189 CKSSDLWALGCIIYQLVA 206
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 153
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 154 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 211 --SACKSSDLWALGCIIYQLVA 230
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 30/212 (14%)
Query: 297 FRDKLGQGGYGEVYKG---ELPD-GQL----VAVKVLKNSRCN-GEEFINEVASISRTSH 347
F + LGQG + +++KG E+ D GQL V +KVL + N E F + +S+ SH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRN-IKLEWKTMYQIAIGIARGLEYL 406
++V G C+ +N L+ E + GSLD ++ ++N I + WK ++A +A + +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAWAMHFL 129
Query: 407 HRGCQVRIVHFDIKPQNILL--DEDFCP------KISDFGLAKQAQKKESAISMLHARGT 458
++H ++ +NILL +ED K+SD G++ K+ +L R
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD----ILQER-- 180
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
I ++ PE ++ +D +S+G + E+
Sbjct: 181 IPWVPPECIENP-KNLNLATDKWSFGTTLWEI 211
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 150
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 208 --SACKSSDLWALGCIIYQLVA 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVRI 414
+++K NG L K+I + Y I LEYLH +G I
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG----I 135
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SA 193
Query: 475 SHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 194 CKSSDLWALGCIIYQLVA 211
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 152
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 210 --SACKSSDLWALGCIIYQLVA 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 152
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 210 --SAXKSSDLWALGCIIYQLVA 229
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 278 ESLAPKRYSY-SDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF- 335
E L P Y Y +V MT R LG+G +GEV++ + D Q +K R E F
Sbjct: 58 EKLKPVDYEYREEVHWMTHQPR--LGRGSFGEVHR--MKDKQTGFQCAVKKVRL--EVFR 111
Query: 336 INEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQI 395
+ E+ + + S IV G E + EL+ GSL + I + E + +Y +
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYYL 170
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFC-PKISDFGLAKQAQKKESAISML- 453
+ GLEYLH RI+H D+K N+LL D + DFG A Q S+L
Sbjct: 171 GQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 454 --HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV-GC 493
+ GT ++APEV + K D++S M++ M+ GC
Sbjct: 227 GDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGC 267
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 150
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 208 --SACKSSDLWALGCIIYQLVA 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 153
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 154 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 211 --SACKSSDLWALGCIIYQLVA 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 155
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 156 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 213 --SACKSSDLWALGCIIYQLVA 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 149
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 150 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 207 --SACKSSDLWALGCIIYQLVA 226
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 152
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 210 --SACKSSDLWALGCIIYQLVA 229
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 20/201 (9%)
Query: 301 LGQGGYGEVYKGE----LPDGQLVAVKVLKNSRC--NGEEFINEVAS---ISRTSHVNIV 351
LG+GGYG+V++ G++ A+KVLK + N ++ + A + H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDR-NIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ K LI E + G L F+ +R I +E + +A I+ L +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLA-EISMALGHLH--- 138
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
Q I++ D+KP+NI+L+ K++DFGL K++ + GTI Y+APE+ R
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC--GTIEYMAPEILMR- 195
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
G + D +S G ++ +M+
Sbjct: 196 -SGHNRAVDWWSLGALMYDML 215
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 152
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 210 --SACKSSDLWALGCIIYQLVA 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 149
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 150 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 207 --SACKSSDLWALGCIIYQLVA 226
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGE-VYKGELPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + E +SR H V
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 150
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 208 --SACKSSDLWALGCIIYQLVA 227
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 20/201 (9%)
Query: 301 LGQGGYGEVYKGE----LPDGQLVAVKVLKNSRC--NGEEFINEVAS---ISRTSHVNIV 351
LG+GGYG+V++ G++ A+KVLK + N ++ + A + H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDR-NIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ K LI E + G L F+ +R I +E + +A I+ L +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLA-EISMALGHLH--- 138
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
Q I++ D+KP+NI+L+ K++DFGL K++ + GTI Y+APE+ R
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC--GTIEYMAPEILMR- 195
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
G + D +S G ++ +M+
Sbjct: 196 -SGHNRAVDWWSLGALMYDML 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 296 SFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGE--EFINEVASISRTSHVNIVT 352
+ +G GG+ +V + G++VA+K++ + + E+ ++ H +I
Sbjct: 13 ELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQ 72
Query: 353 FLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
K ++ E P G L D I DR + E + +++ I + Y+H
Sbjct: 73 LYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---QIVSAVAYVHSQG- 128
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGL-AKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
H D+KP+N+L DE K+ DFGL AK K+ + G++ Y APE+ +
Sbjct: 129 --YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT--CCGSLAYAAPELIQGK 184
Query: 471 FGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATE 529
+ ++DV+S G+++ + M G DD V +Y++I G +
Sbjct: 185 -SYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-------ALYKKIMRGK--------YD 228
Query: 530 EEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
K ++ IL+ +Q +P +R SM +L
Sbjct: 229 VPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 150
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 208 --SACKSSDLWALGCIIYQLVA 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 297 FRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIV 351
F LG+G + V EL + A+K+L+ E + V +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 352 TFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGC 410
+++K NG L K+I + Y I LEYLH +G
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--VSALEYLHGKG- 152
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP+NILL+ED +I+DFG AK + GT Y++PE+ + +
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 471 FGGVSHKSDVYSYGMMIIEMVG 492
SD+++ G +I ++V
Sbjct: 210 --SACKSSDLWALGCIIYQLVA 229
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 22/248 (8%)
Query: 268 RNVEAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLV-AVKVLK 326
+N++ F+ +E + K+ +K +G+G +GEV Q V A+K+L
Sbjct: 51 KNIDNFLNRYEKIV-KKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLS 109
Query: 327 N----SRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHND 382
R + F E ++ + +V ++K ++ E MP G L + N
Sbjct: 110 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN- 168
Query: 383 RNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ 442
++ +W Y + +A L+ +H + ++H D+KP N+LLD+ K++DFG
Sbjct: 169 YDVPEKWAKFYTAEVVLA--LDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTC-- 221
Query: 443 AQKKESAISMLH---ARGTIGYIAPEVYSRRFGG--VSHKSDVYSYGMMIIEM-VGCTKN 496
K M+H A GT YI+PEV + G + D +S G+ + EM VG T
Sbjct: 222 --MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
Query: 497 LDDEVTDT 504
D + T
Sbjct: 280 YADSLVGT 287
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 55/314 (17%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTS 346
VK S ++G GG +V++ Q+ A+K + + + + NE+A +++
Sbjct: 9 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 68
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLD--KFIHNDRNI-----KLEWKTMYQIAIGI 399
+ + YE + IY +M G++D ++ ++I K WK M
Sbjct: 69 QHSDKIIRLYDYE-ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 120
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
LE +H Q IVH D+KP N L+ D K+ DFG+A Q Q +++ GT+
Sbjct: 121 ---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 460 GYIAPE----VYSRRFGG-----VSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
Y+ PE + S R G +S KSDV+S G ++ M + S H +
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
Query: 511 IYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSM-------------H 557
I+P ++ +F + ++ + + K C++ +P +R S+ H
Sbjct: 237 ----IDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELLAHPYVQIQTH 285
Query: 558 KVLEMLEGSIENLQ 571
V +M +G+ E ++
Sbjct: 286 PVNQMAKGTTEEMK 299
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 291 KRMTKSFRDKLGQGGYGEVY-----KGELPDGQLVAVKVLKNSRCNGEE--FINEVASIS 343
KR K RD LG+G +G+V G++VAVK LK + E+ +
Sbjct: 30 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILR 88
Query: 344 RTSHVNIVTFLGFCYENKKNAL--IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIAR 401
H +I+ + G C + +L + E +P GSL ++ +I L ++ A I
Sbjct: 89 TLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLF--AQQICE 145
Query: 402 GLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH-ARGTIG 460
G+ YLH +H D+ +N+LLD D KI DFGLAK + + +
Sbjct: 146 GMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF 202
Query: 461 YIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ APE + SDV+S+G+ + E++
Sbjct: 203 WYAPECLKEY--KFYYASDVWSFGVTLYELL 231
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 55/314 (17%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTS 346
VK S ++G GG +V++ Q+ A+K + + + + NE+A +++
Sbjct: 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 65
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLD--KFIHNDRNI-----KLEWKTMYQIAIGI 399
+ + YE + IY +M G++D ++ ++I K WK M
Sbjct: 66 QHSDKIIRLYDYE-ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 117
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
LE +H Q IVH D+KP N L+ D K+ DFG+A Q Q +++ GT+
Sbjct: 118 ---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 460 GYIAPE----VYSRRFGG-----VSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
Y+ PE + S R G +S KSDV+S G ++ M + S H +
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
Query: 511 IYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSM-------------H 557
I+P ++ +F + ++ + + K C++ +P +R S+ H
Sbjct: 234 ----IDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELLAHPYVQIQTH 282
Query: 558 KVLEMLEGSIENLQ 571
V +M +G+ E ++
Sbjct: 283 PVNQMAKGTTEEMK 296
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVK-VLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYE 359
+G G +G V++ +L + VA+K VL++ R E ++ I + H N+V F Y
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL--QIMRIVK--HPNVVDLKAFFYS 103
Query: 360 N--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGI-----ARGLEYLHRGCQV 412
N KK+ + L+ + R+ +TM + I + R L Y+H +
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SI 160
Query: 413 RIVHFDIKPQNILLD-EDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
I H DIKPQN+LLD K+ DFG AK E +S + +R Y APE+ F
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRAPELI---F 214
Query: 472 GGVSHKS--DVYSYGMMIIEMV 491
G ++ + D++S G ++ E++
Sbjct: 215 GATNYTTNIDIWSTGCVMAELM 236
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 278 ESLAPKRYSY-SDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF- 335
E L P Y Y +V MT R +G+G +GEV++ + D Q +K R E F
Sbjct: 44 EKLKPVDYEYREEVHWMTHQPR--VGRGSFGEVHR--MKDKQTGFQCAVKKVRL--EVFR 97
Query: 336 INEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQI 395
+ E+ + + S IV G E + EL+ GSL + I + E + +Y +
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYYL 156
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFC-PKISDFGLAKQAQKKESAISML- 453
+ GLEYLH RI+H D+K N+LL D + DFG A Q S+L
Sbjct: 157 GQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 454 --HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV-GC 493
+ GT ++APEV + K D++S M++ M+ GC
Sbjct: 213 GDYIPGTETHMAPEVVMGKP--CDAKVDIWSSCCMMLHMLNGC 253
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 55/314 (17%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTS 346
VK S ++G GG +V++ Q+ A+K + + + + NE+A +++
Sbjct: 5 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 64
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLD--KFIHNDRNI-----KLEWKTMYQIAIGI 399
+ + YE + IY +M G++D ++ ++I K WK M
Sbjct: 65 QHSDKIIRLYDYE-ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 116
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
LE +H Q IVH D+KP N L+ D K+ DFG+A Q Q +++ GT+
Sbjct: 117 ---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 460 GYIAPE----VYSRRFGG-----VSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
Y+ PE + S R G +S KSDV+S G ++ M + S H +
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 232
Query: 511 IYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSM-------------H 557
I+P ++ +F + ++ + + K C++ +P +R S+ H
Sbjct: 233 ----IDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELLAHPYVQIQTH 281
Query: 558 KVLEMLEGSIENLQ 571
V +M +G+ E ++
Sbjct: 282 PVNQMAKGTTEEMK 295
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGE----EFINEVASISRTSHVNIVTFLG 355
LG+G +G VY E + ++A+KVL S+ E + E+ S H NI+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ K+ L+ E P G L K + ++ + + + +A L Y H + +++
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELADALHYCH---ERKVI 136
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+L+ KI+DFG + A ++ GT+ Y+ PE+ G +
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHA----PSLRRRXMCGTLDYLPPEMIE----GKT 188
Query: 476 H--KSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKK 533
H K D++ G++ E + D S H + RI D +F ++ K
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFD------SPSHTETHRRIV-NVDLKFPPFLSDGSKD 241
Query: 534 IAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ + ++ +P +R + V+E
Sbjct: 242 LISKL-------LRYHPPQRLPLKGVME 262
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGE----EFINEVASISRTSHVNIVTFLG 355
LG+G +G VY E + ++A+KVL S+ E + E+ S H NI+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ K+ L+ E P G L K + ++ + + + +A L Y H + +++
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELADALHYCH---ERKVI 137
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+L+ KI+DFG + A ++ GT+ Y+ PE+ G +
Sbjct: 138 HRDIKPENLLMGYKGELKIADFGWSVHA----PSLRRRXMCGTLDYLPPEMIE----GKT 189
Query: 476 H--KSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATEEEKK 533
H K D++ G++ E + D S H + RI D +F ++ K
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFD------SPSHTETHRRIV-NVDLKFPPFLSDGSKD 242
Query: 534 IAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ + ++ +P +R + V+E
Sbjct: 243 LISKL-------LRYHPPQRLPLKGVME 263
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTS 346
VK S ++G GG +V++ Q+ A+K + + + + NE+A +++
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLD--KFIHNDRNI-----KLEWKTMYQIAIGI 399
+ + YE + IY +M G++D ++ ++I K WK M
Sbjct: 85 QHSDKIIRLYDYE-ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 136
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
LE +H Q IVH D+KP N L+ D K+ DFG+A Q Q +++ GT+
Sbjct: 137 ---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 460 GYIAPE----VYSRRFGG-----VSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
Y+ PE + S R G +S KSDV+S G ++ M + S H +
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 511 IYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I+P ++ +F + ++ + + K C++ +P +R S+ ++L
Sbjct: 253 ----IDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELL 291
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGE----EFINEVASISRTSHVNIVTFLG 355
LG+G +G VY E + ++A+KVL S+ E + E+ S H NI+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+ ++ K+ L+ E P G L K + ++ + + + +A L Y H + +++
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELADALHYCH---ERKVI 136
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
H DIKP+N+L+ KI+DFG + A ++ GT+ Y+ PE+ G +
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHA----PSLRRRXMCGTLDYLPPEMIE----GKT 188
Query: 476 H--KSDVYSYGMMIIEMV 491
H K D++ G++ E +
Sbjct: 189 HDEKVDLWCAGVLCYEFL 206
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 30/212 (14%)
Query: 297 FRDKLGQGGYGEVYKG---ELPD-GQL----VAVKVLKNSRCN-GEEFINEVASISRTSH 347
F + LGQG + +++KG E+ D GQL V +KVL + N E F + +S+ SH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRN-IKLEWKTMYQIAIGIARGLEYL 406
++V G C +N L+ E + GSLD ++ ++N I + WK ++A +A + +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAAAMHFL 129
Query: 407 HRGCQVRIVHFDIKPQNILL--DEDFCP------KISDFGLAKQAQKKESAISMLHARGT 458
++H ++ +NILL +ED K+SD G++ K+ +L R
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD----ILQER-- 180
Query: 459 IGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
I ++ PE ++ +D +S+G + E+
Sbjct: 181 IPWVPPECIENP-KNLNLATDKWSFGTTLWEI 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 278 ESLAPKRYSY-SDVKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF- 335
E L P Y Y +V MT R +G+G +GEV++ + D Q +K R E F
Sbjct: 60 EKLKPVDYEYREEVHWMTHQPR--VGRGSFGEVHR--MKDKQTGFQCAVKKVRL--EVFR 113
Query: 336 INEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQI 395
+ E+ + + S IV G E + EL+ GSL + I + E + +Y +
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYYL 172
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFC-PKISDFGLAKQAQKKESAISML- 453
+ GLEYLH RI+H D+K N+LL D + DFG A Q S+L
Sbjct: 173 GQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 454 --HARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV-GC 493
+ GT ++APEV + K D++S M++ M+ GC
Sbjct: 229 GDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGC 269
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 137/284 (48%), Gaps = 38/284 (13%)
Query: 292 RMTKSFR--DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT- 345
R T+ ++ ++LG+G + V + ++ GQ A ++ + + + + A I R
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 346 SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEY 405
H NIV E + LI++L+ G L + I + E+ + + I + LE
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEA 122
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDF---CPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
+ Q+ +VH ++KP+N+LL K++DFGLA + + ++ A GT GY+
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA--WFGFAGTPGYL 180
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-D 520
+PEV + G D+++ G+++ I +VG D++ + +Y++I+ G D
Sbjct: 181 SPEVLRKDPYG--KPVDLWACGVILYILLVGYPPFWDED-------QHRLYQQIKAGAYD 231
Query: 521 F---QFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
F ++D V E + I KM+ + NPS+R + + L+
Sbjct: 232 FPSPEWDTVTPEAKDLINKMLTI--------NPSKRITAAEALK 267
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 55/314 (17%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTS 346
VK S ++G GG +V++ Q+ A+K + + + + NE+A +++
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLD--KFIHNDRNI-----KLEWKTMYQIAIGI 399
+ + YE + IY +M G++D ++ ++I K WK M
Sbjct: 113 QHSDKIIRLYDYE-ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 164
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
LE +H Q IVH D+KP N L+ D K+ DFG+A Q Q +++ GT+
Sbjct: 165 ---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 460 GYIAPE----VYSRRFGG-----VSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
Y+ PE + S R G +S KSDV+S G ++ M + S H +
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 511 IYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSM-------------H 557
I+P ++ +F + ++ + + K C++ +P +R S+ H
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELLAHPYVQIQTH 329
Query: 558 KVLEMLEGSIENLQ 571
V +M +G+ E ++
Sbjct: 330 PVNQMAKGTTEEMK 343
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTS 346
VK S ++G GG +V++ Q+ A+K + + + + NE+A +++
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLD--KFIHNDRNI-----KLEWKTMYQIAIGI 399
+ + YE + IY +M G++D ++ ++I K WK M
Sbjct: 113 QHSDKIIRLYDYE-ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 164
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
LE +H Q IVH D+KP N L+ D K+ DFG+A Q Q +++ GT+
Sbjct: 165 ---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 460 GYIAPE----VYSRRFGG-----VSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
Y+ PE + S R G +S KSDV+S G ++ M + S H +
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 511 IYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I+P ++ +F + ++ + + K C++ +P +R S+ ++L
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELL 319
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 291 KRMTKSFRDKLGQGGYGEVY-----KGELPDGQLVAVKVLKNSRCNGE---EFINEVASI 342
KR K RD LG+G +G+V G++VAVK LK C + + E+ +
Sbjct: 8 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG-CGPQLRSGWQREIEIL 65
Query: 343 SRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIA 400
H +IV + G C + K L+ E +P GSL ++ + L ++ A I
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLLF--AQQIC 122
Query: 401 RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH-ARGTI 459
G+ YLH +H + +N+LLD D KI DFGLAK + + +
Sbjct: 123 EGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 179
Query: 460 GYIAPEVYSR-RFGGVSHKSDVYSYGMMIIEMV 491
+ APE +F + SDV+S+G+ + E++
Sbjct: 180 FWYAPECLKECKF---YYASDVWSFGVTLYELL 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 19/207 (9%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VA+K++ ++ N ++ EV + +H NIV
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K LI E G + D + + R + E ++ ++ I ++Y H Q RIV
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCH---QKRIV 136
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-GTIGYIAPEVYS-RRFGG 473
H D+K +N+LLD D KI+DFG + + + L A G Y APE++ +++ G
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEF----TVGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 474 VSHKSDVYSYGMMIIEMVGCTKNLDDE 500
+ DV+S G+++ +V + D +
Sbjct: 193 --PEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVL----KNSRCNGEEFINEVASIS 343
D +++ R+ +G G +G VY ++ + ++VA+K + K S ++ I EV +
Sbjct: 12 DPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+ H N + + G CY + A + GS + + L+ + + G +GL
Sbjct: 71 KLRHPNTIQYRG-CYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGL 128
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
YLH ++H D+K NILL E K+ DFG A + GT ++A
Sbjct: 129 AYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMA 179
Query: 464 PEV-YSRRFGGVSHKSDVYSYGMMIIEM 490
PEV + G K DV+S G+ IE+
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 289 DVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVL----KNSRCNGEEFINEVASIS 343
D +++ R+ +G G +G VY ++ + ++VA+K + K S ++ I EV +
Sbjct: 51 DPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 344 RTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+ H N + + G CY + A + GS + + L+ + + G +GL
Sbjct: 110 KLRHPNTIQYRG-CYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGL 167
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
YLH ++H D+K NILL E K+ DFG A + GT ++A
Sbjct: 168 AYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMA 218
Query: 464 PEV-YSRRFGGVSHKSDVYSYGMMIIEM 490
PEV + G K DV+S G+ IE+
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 321 AVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFI 379
AVK++ S+ + E I + + H NI+T + K ++ ELM G L DK +
Sbjct: 51 AVKIIDKSKRDPTEEIEIL--LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL 108
Query: 380 HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNIL-LDEDFCP---KIS 435
R + + I + +EYLH +VH D+KP NIL +DE P +I
Sbjct: 109 ---RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRIC 162
Query: 436 DFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
DFG AKQ + E+ + M T ++APEV R+ G D++S G+++ M+
Sbjct: 163 DFGFAKQL-RAENGLLMTPCY-TANFVAPEVLERQ--GYDAACDIWSLGVLLYTML 214
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 291 KRMTKSFRDKLGQGGYGEVY-----KGELPDGQLVAVKVLKNSRCNGE---EFINEVASI 342
KR K RD LG+G +G+V G++VAVK LK C + + E+ +
Sbjct: 7 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG-CGPQLRSGWQREIEIL 64
Query: 343 SRTSHVNIVTFLGFCYEN--KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIA 400
H +IV + G C + K L+ E +P GSL ++ + L ++ A I
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLLF--AQQIC 121
Query: 401 RGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH-ARGTI 459
G+ YLH +H + +N+LLD D KI DFGLAK + + +
Sbjct: 122 EGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 178
Query: 460 GYIAPEVYSR-RFGGVSHKSDVYSYGMMIIEMV 491
+ APE +F + SDV+S+G+ + E++
Sbjct: 179 FWYAPECLKECKF---YYASDVWSFGVTLYELL 208
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 35/269 (13%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VAVK++ ++ N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K L+ E G + D + + R + E + ++ I ++Y H Q IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIV 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS-RRFGGV 474
H D+K +N+LLD D KI+DFG + + + G+ Y APE++ +++ G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDG- 191
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL--IYERIEPGNDFQFDGVATEEEK 532
+ DV+S G+++ +V + D + NL + ER+ G ++T+ E
Sbjct: 192 -PEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ K +IL NPS+R ++ ++++
Sbjct: 243 LLKKFLIL--------NPSKRGTLEQIMK 263
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
+G G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E MP G D F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ K++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
+G G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E MP G D F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ K++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 35/269 (13%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VAVK++ ++ N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K L+ E G + D + + R + E + ++ I ++Y H Q IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIV 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS-RRFGGV 474
H D+K +N+LLD D KI+DFG + + + G+ Y APE++ +++ G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDG- 191
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL--IYERIEPGNDFQFDGVATEEEK 532
+ DV+S G+++ +V + D + NL + ER+ G ++T+ E
Sbjct: 192 -PEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ K +IL NPS+R ++ ++++
Sbjct: 243 LLKKFLIL--------NPSKRGTLEQIMK 263
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 301 LGQGGYGEVY--KGELPDGQLVAVKV-LKNSRCNGEEFINEVASISRTSHVNIVTFLGFC 357
LG+GG+G V+ K ++ D ++ L N E+ + EV ++++ H IV +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 358 YENKKNALIYELMPNGSL--DKFIHNDRNIK-----------LEWKTMYQIAIGIARGLE 404
E + P L + N+K E I + IA +E
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 405 YLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-----HAR--- 456
+LH ++H D+KP NI D K+ DFGL + E ++L +AR
Sbjct: 133 FLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 457 --GTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMV 491
GT Y++PE ++ + SHK D++S G+++ E++
Sbjct: 190 QVGTKLYMSPEQIHGNSY---SHKVDIFSLGLILFELL 224
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VA+K++ ++ N ++ EV + +H NIV
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K LI E G + D + + R + E ++ ++ I ++Y H Q RIV
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCH---QKRIV 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS-RRFGGV 474
H D+K +N+LLD D KI+DFG + + + G+ Y APE++ +++ G
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAAPELFQGKKYDG- 189
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDE 500
+ DV+S G+++ +V + D +
Sbjct: 190 -PEVDVWSLGVILYTLVSGSLPFDGQ 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 299 DKLGQGGYGEVYKGELP-DGQLVAVKVLKNS---RCNGEEFINEVASISRTSHVNIVTFL 354
+ +G G YG V GQ VA+K + N+ N + + E+ + H NI+
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 355 GFCY------ENKKNALIYELMPNGSLDKFIHNDRNIKLEWKT--MYQIAIGIARGLEYL 406
E K ++ +LM L + IH+ + + LE +YQ+ RGL+Y+
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL----RGLKYM 175
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ--AQKKESAISMLHARGTIGYIAP 464
H +++H D+KP N+L++E+ KI DFG+A+ E M T Y AP
Sbjct: 176 H---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 465 EVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
E+ + D++S G + EM+
Sbjct: 233 ELML-SLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTS 346
VK S ++G GG +V++ Q+ A+K + + + + NE+A +++
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLD--KFIHNDRNI-----KLEWKTMYQIAIGI 399
+ + YE + IY +M G++D ++ ++I K WK M
Sbjct: 85 QHSDKIIRLYDYE-ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 136
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
LE +H Q IVH D+KP N L+ D K+ DFG+A Q Q + GT+
Sbjct: 137 ---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 460 GYIAPE----VYSRRFGG-----VSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
Y+ PE + S R G +S KSDV+S G ++ M + S H +
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 511 IYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
I+P ++ +F + ++ + + K C++ +P +R S+ ++L
Sbjct: 253 ----IDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELL 291
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 317 GQLVAVKVLKNS--RCNGEEFINEVASISRTSHV--------NIVTFLGFCYENKKNALI 366
G AVK+++ + R + E+ + R +H+ +I+T + + L+
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 367 YELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILL 426
++LM G L F + + L K I + + +LH IVH D+KP+NILL
Sbjct: 179 FDLMRKGEL--FDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILL 233
Query: 427 DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY----SRRFGGVSHKSDVYS 482
D++ ++SDFG + + E + GT GY+APE+ G + D+++
Sbjct: 234 DDNMQIRLSDFGFSCHLEPGEKLRELC---GTPGYLAPEILKCSMDETHPGYGKEVDLWA 290
Query: 483 YGMMIIEMVG 492
G+++ ++
Sbjct: 291 CGVILFTLLA 300
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 39/271 (14%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VAVK++ ++ N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K L+ E G + D + + R + E + ++ I ++Y H Q IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIV 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQ--KKESAISMLHARGTIGYIAPEVYS-RRFG 472
H D+K +N+LLD D KI+DFG + + K A G Y APE++ +++
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC-----GAPPYAAPELFQGKKYD 190
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL--IYERIEPGNDFQFDGVATEE 530
G + DV+S G+++ +V + D + NL + ER+ G ++T+
Sbjct: 191 G--PEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGKYRIPFYMSTDC 240
Query: 531 EKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
E + K +IL NPS+R ++ ++++
Sbjct: 241 ENLLKKFLIL--------NPSKRGTLEQIMK 263
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 333 EEFINEVASISRTS-HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKT 391
E + EV + + S H NI+ N L+++LM G L F + + L K
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEKVTLSEKE 125
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
+I + + LH+ + IVH D+KP+NILLD+D K++DFG + Q E S
Sbjct: 126 TRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS 182
Query: 452 MLHARGTIGYIAPEV----YSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ GT Y+APE+ + G + D++S G+++ ++
Sbjct: 183 VC---GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYEN 360
+G+G YGEV++G L G+ VAVK+ + E+ + H NI+ F+ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 361 KKNA----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR---GCQVR 413
+ ++ LI +GSL F+ LE ++A+ A GL +LH G Q +
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQ---TLEPHLALRLAVSAACGLAHLHVEIFGTQGK 131
Query: 414 --IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH--ARGTIGYIAPEVYSR 469
I H D K +N+L+ + I+D GLA + + + + GT Y+APEV
Sbjct: 132 PAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDE 191
Query: 470 RFGGVSHKS----DVYSYGMMIIEM 490
+ +S D++++G+++ E+
Sbjct: 192 QIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 21/236 (8%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQ-LVAVKVLKNSRCNGEEFIN----EVASISR 344
VK +F LG+G +G+V + + L A+K+LK ++ + E ++
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 345 TSHVNIVTFLGFCYEN-KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+T L C++ + + E + G L I K Y I I GL
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI--GL 133
Query: 404 EYLH-RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYI 462
+LH RG I++ D+K N++LD + KI+DFG+ K+ ++ GT YI
Sbjct: 134 FFLHKRG----IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM--DGVTTREFCGTPDYI 187
Query: 463 APEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLD----DEVTDTSICHNLIYER 514
APE+ + + G S D ++YG+++ EM+ D DE+ + + HN+ Y +
Sbjct: 188 APEIIAYQPYGKS--VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 241
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 129/281 (45%), Gaps = 37/281 (13%)
Query: 287 YSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVL-KNSRCNGEEFINEVASISR 344
+ D+ ++T LG+G Y +V L +G+ AVK++ K + + EV ++ +
Sbjct: 10 FEDMYKLTSEL---LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 345 -TSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
+ NI+ + F ++ + L++E + GS+ H + + ++ +A L
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 404 EYLH-RGCQVRIVHFDIKPQNILLD--EDFCP-KISDFGLAKQAQKKESAISMLHAR--- 456
++LH +G I H D+KP+NIL + E P KI DF L + S +
Sbjct: 125 DFLHTKG----IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 457 --GTIGYIAP---EVYSRRFGGVSHKSDVYSYGMMIIEMVG--------CTKNLD-DEVT 502
G+ Y+AP EV++ + + D++S G+++ M+ C + D
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGE 240
Query: 503 DTSICHNLIYERIEPGN----DFQFDGVATEEEKKIAKMMI 539
+C N ++E I+ G D + +++E + I+K+++
Sbjct: 241 VCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLV 281
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 126/269 (46%), Gaps = 35/269 (13%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VAV+++ ++ N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K L+ E G + D + + R + E + ++ I ++Y H Q IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIV 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS-RRFGGV 474
H D+K +N+LLD D KI+DFG + + + G+ Y APE++ +++ G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDG- 191
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL--IYERIEPGNDFQFDGVATEEEK 532
+ DV+S G+++ +V + D + NL + ER+ G ++T+ E
Sbjct: 192 -PEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ K +IL NPS+R ++ ++++
Sbjct: 243 LLKKFLIL--------NPSKRGTLEQIMK 263
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 25/209 (11%)
Query: 300 KLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYE 359
++G+G YGEV+ G+ G+ VAVKV + E+ H NI LGF
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENI---LGFIAA 99
Query: 360 NKKNA-------LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC-- 410
+ K LI + NGSL ++ ++ L+ K+M ++A GL +LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 411 ---QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ--AQKKESAISMLHARGTIGYIAPE 465
+ I H D+K +NIL+ ++ I+D GLA + + E I GT Y+ PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 466 VYSRRFGGVSHKS----DVYSYGMMIIEM 490
V +S D+YS+G+++ E+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 299 DKLGQGGYGEVYKGELP-DGQLVAVKVLKNS---RCNGEEFINEVASISRTSHVNIVTFL 354
+ +G G YG V GQ VA+K + N+ N + + E+ + H NI+
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 355 GFCY------ENKKNALIYELMPNGSLDKFIHNDRNIKLEWKT--MYQIAIGIARGLEYL 406
E K ++ +LM L + IH+ + + LE +YQ+ RGL+Y+
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL----RGLKYM 174
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ--AQKKESAISMLHARGTIGYIAP 464
H +++H D+KP N+L++E+ KI DFG+A+ E M T Y AP
Sbjct: 175 HSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 465 EVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
E+ + D++S G + EM+
Sbjct: 232 ELML-SLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 26/206 (12%)
Query: 301 LGQGGYGEVY-----KGELPDGQLVAVKVLKNSRCNGEEFINEVASISRT--SHVNIVTF 353
LG G YG+V+ G G+L A+KVLK + + E R H+ F
Sbjct: 62 LGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 354 L-----GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIG-IARGLEYLH 407
L F E K + LI + + G L F H + + + QI +G I LE+LH
Sbjct: 121 LVTLHYAFQTETKLH-LILDYINGGEL--FTHLSQRERFTEHEV-QIYVGEIVLALEHLH 176
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ--AQKKESAISMLHARGTIGYIAPE 465
+ + I++ DIK +NILLD + ++DFGL+K+ A + E A GTI Y+AP+
Sbjct: 177 K---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC---GTIEYMAPD 230
Query: 466 VYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ G D +S G+++ E++
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELL 256
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 136/314 (43%), Gaps = 55/314 (17%)
Query: 290 VKRMTKSFRDKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTS 346
VK S ++G GG +V++ Q+ A+K + + + + NE+A +++
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLD--KFIHNDRNI-----KLEWKTMYQIAIGI 399
+ + YE + IY +M G++D ++ ++I K WK M
Sbjct: 113 QHSDKIIRLYDYE-ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 164
Query: 400 ARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTI 459
LE +H Q IVH D+KP N L+ D K+ DFG+A Q Q +++ G +
Sbjct: 165 ---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 460 GYIAPE----VYSRRFGG-----VSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL 510
Y+ PE + S R G +S KSDV+S G ++ M + S H +
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 511 IYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSM-------------H 557
I+P ++ +F + ++ + + K C++ +P +R S+ H
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELLAHPYVQIQTH 329
Query: 558 KVLEMLEGSIENLQ 571
V +M +G+ E ++
Sbjct: 330 PVNQMAKGTTEEMK 343
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
+G+G Y +V L ++ A+KV+K N +E I+ V + + S+ + L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 356 FCYENKKNAL-IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVR 413
C++ + + E + G L + R + E Y I +A L YLH RG
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG---- 141
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG 473
I++ D+K N+LLD + K++D+G+ K+ + S GT YIAPE+ G
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRGEDYG 199
Query: 474 VSHKSDVYSYGMMIIEMVGCTKNLD 498
S D ++ G+++ EM+ D
Sbjct: 200 FS--VDWWALGVLMFEMMAGRSPFD 222
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E P G + F H R + A I EYLH + +
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ K++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 216
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 217 NKAVDWWALGVLIYEMAA 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E P G + F H R + A I EYLH + +
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ K++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 216
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 217 NKAVDWWALGVLIYEMAA 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E P G + F H R + A I EYLH + +
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ K++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 216
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 217 NKAVDWWALGVLIYEMAA 234
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 333 EEFINEVASISRTS-HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKT 391
E + EV + + S H NI+ N L+++LM G L F + + L K
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEKVTLSEKE 112
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
+I + + LH+ + IVH D+KP+NILLD+D K++DFG + Q E
Sbjct: 113 TRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---K 166
Query: 452 MLHARGTIGYIAPEV----YSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ GT Y+APE+ + G + D++S G+++ ++
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
+G+G Y +V L ++ A+KV+K N +E I+ V + + S+ + L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 356 FCYENKKNAL-IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVR 413
C++ + + E + G L + R + E Y I +A L YLH RG
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG---- 130
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG 473
I++ D+K N+LLD + K++D+G+ K+ + S GT YIAPE+ G
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRGEDYG 188
Query: 474 VSHKSDVYSYGMMIIEMVGCTKNLD 498
S D ++ G+++ EM+ D
Sbjct: 189 FS--VDWWALGVLMFEMMAGRSPFD 211
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
+G+G Y +V L ++ A+KV+K N +E I+ V + + S+ + L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 356 FCYENKKNAL-IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVR 413
C++ + + E + G L + R + E Y I +A L YLH RG
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG---- 126
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG 473
I++ D+K N+LLD + K++D+G+ K+ + S GT YIAPE+ G
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRGEDYG 184
Query: 474 VSHKSDVYSYGMMIIEMVGCTKNLD 498
S D ++ G+++ EM+ D
Sbjct: 185 FS--VDWWALGVLMFEMMAGRSPFD 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 137/285 (48%), Gaps = 40/285 (14%)
Query: 292 RMTKSFR--DKLGQGGYGEVYK--GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT 345
R T ++ ++LG+G + V + + P Q A K++ + + + + A I R
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPT-QEYAAKIINTKKLSARDHQKLEREARICRL 86
Query: 346 -SHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLE 404
H NIV E + L+++L+ G L + I + E+ + + I + LE
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIHQILE 141
Query: 405 YLHRGCQVRIVHFDIKPQNILLD---EDFCPKISDFGLAKQAQKKESAISMLHARGTIGY 461
++ Q IVH D+KP+N+LL + K++DFGLA + Q ++ A GT GY
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA--WFGFAGTPGY 199
Query: 462 IAPEVYSRRFGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN- 519
++PEV + G D+++ G+++ I +VG D++ + +Y++I+ G
Sbjct: 200 LSPEVLRKDPYG--KPVDIWACGVILYILLVGYPPFWDED-------QHKLYQQIKAGAY 250
Query: 520 DF---QFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
DF ++D V E + I +M+ + NP++R + + L+
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTI--------NPAKRITADQALK 287
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ K++DFGLAK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 333 EEFINEVASISRTS-HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKT 391
E + EV + + S H NI+ N L+++LM G L F + + L K
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEKVTLSEKE 125
Query: 392 MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAIS 451
+I + + LH+ + IVH D+KP+NILLD+D K++DFG + Q E
Sbjct: 126 TRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---K 179
Query: 452 MLHARGTIGYIAPEV----YSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ GT Y+APE+ + G + D++S G+++ ++
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKN----SRCNGEEFINEVASISRTSHVNIVTFLG 355
+G+G +GEV + V A+K+L R + F E ++ + +V
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+++ ++ E MP G L + N ++ +W Y + +A L+ +H + +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLA--LDAIH---SMGFI 195
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-- 473
H D+KP N+LLD+ K++DFG + KE + A GT YI+PEV + G
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 474 VSHKSDVYSYGMMIIEM-VGCTKNLDDEVTDT 504
+ D +S G+ + EM VG T D + T
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 286
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 271 EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSR 329
E F++ ES A +R+ LG G +G V + + G A+K+L +
Sbjct: 25 EDFLKKWESPAQNTAHLDQFERIRT-----LGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 330 C----NGEEFINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRN 384
E +NE I + + + L F +++ N ++ E P G + F H R
Sbjct: 80 VVKLKQIEHTLNE-KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM--FSHLRRI 136
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
+ A I EYLH + +++ D+KP+N+L+D+ K++DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 193
Query: 445 KKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ + GT Y+APE+ + G + D ++ G++I EM
Sbjct: 194 GRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKN----SRCNGEEFINEVASISRTSHVNIVTFLG 355
+G+G +GEV + V A+K+L R + F E ++ + +V
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+++ ++ E MP G L + N ++ +W Y + +A L+ +H + +
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLA--LDAIH---SMGFI 190
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-- 473
H D+KP N+LLD+ K++DFG + KE + A GT YI+PEV + G
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 474 VSHKSDVYSYGMMIIEM-VGCTKNLDDEVTDT 504
+ D +S G+ + EM VG T D + T
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 281
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 35/269 (13%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VAV+++ ++ N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K L+ E G + D + + R + E + ++ I ++Y H Q IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIV 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS-RRFGGV 474
H D+K +N+LLD D KI+DFG + + G+ Y APE++ +++ G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC---GSPPYAAPELFQGKKYDG- 191
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL--IYERIEPGNDFQFDGVATEEEK 532
+ DV+S G+++ +V + D + NL + ER+ G ++T+ E
Sbjct: 192 -PEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ K +IL NPS+R ++ ++++
Sbjct: 243 LLKKFLIL--------NPSKRGTLEQIMK 263
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 399 IARGLEYLH-RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARG 457
+ARG+E+L R C +H D+ +NILL E+ KI DFGLA+ K + R
Sbjct: 208 VARGMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 458 TIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYERI 515
+ ++APE ++ + + S KSDV+SYG+++ E+ + V D C R+
Sbjct: 264 PLKWMAPESIFDKIY---STKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCS-----RL 315
Query: 516 EPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
G + +T E I ++M+ C +P ERP +++E L
Sbjct: 316 REGMRMRAPEYSTPE---IYQIMLD----CWHRDPKERPRFAELVEKL 356
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 27/166 (16%)
Query: 333 EEFINEVASISRTSHVNIVTFLGFCYENKKNAL--IYELMPNGSLDKFIHNDRNIKLEWK 390
E+ E+A + + H N+V + + ++ L ++EL+ G + +E
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV-----------MEVP 129
Query: 391 TMYQIAIGIAR--------GLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQ 442
T+ ++ AR G+EYLH +I+H DIKP N+L+ ED KI+DFG++ +
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 443 AQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS-DVYSYGMMI 487
+ ++ +S + GT ++APE S S K+ DV++ G+ +
Sbjct: 187 FKGSDALLS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFINEVAS----ISRTSHVNIVTFLG 355
+G+G Y +V L ++ A++V+K N +E I+ V + + S+ + L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 356 FCYENKKNAL-IYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH-RGCQVR 413
C++ + + E + G L + R + E Y I +A L YLH RG
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG---- 173
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG 473
I++ D+K N+LLD + K++D+G+ K+ + S GT YIAPE+ G
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--GTPNYIAPEILRGEDYG 231
Query: 474 VSHKSDVYSYGMMIIEMVGCTKNLD 498
S D ++ G+++ EM+ D
Sbjct: 232 FS--VDWWALGVLMFEMMAGRSPFD 254
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKN----SRCNGEEFINEVASISRTSHVNIVTFLG 355
+G+G +GEV + V A+K+L R + F E ++ + +V
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
+++ ++ E MP G L + N ++ +W Y + +A L+ +H + +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLA--LDAIH---SMGFI 195
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG-- 473
H D+KP N+LLD+ K++DFG + KE + A GT YI+PEV + G
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 474 VSHKSDVYSYGMMIIEM-VGCTKNLDDEVTDT 504
+ D +S G+ + EM VG T D + T
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 286
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 93
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 148
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 149 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIILSK--GY 201
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 202 NKAVDWWALGVLIYEMAA 219
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 271 EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSR 329
E F++ ES A +R+ LG G +G V + + G A+K+L +
Sbjct: 17 EDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDKQK 71
Query: 330 C----NGEEFINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRN 384
E +NE I + + + L F +++ N ++ E +P G + F H R
Sbjct: 72 VVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRI 128
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
+ A I EYLH + +++ D+KP+N+L+D+ +++DFG AK+ +
Sbjct: 129 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 185
Query: 445 KKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ + GT Y+APE+ + G + D ++ G++I EM
Sbjct: 186 GRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 226
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 36/272 (13%)
Query: 300 KLGQGGYGEVYKGELPDGQL-VAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCY 358
+LG+G VY+ + Q A+KVLK + + + E+ + R SH NI+
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKT-VDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 359 ENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLE---YLHRGCQVRIV 415
+ +L+ EL+ G L DR ++ + + A + + LE YLH IV
Sbjct: 119 TPTEISLVLELVTGGEL-----FDRIVEKGYYSERDAADAVKQILEAVAYLHENG---IV 170
Query: 416 HFDIKPQNILLDE---DFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
H D+KP+N+L D KI+DFGL+K E + M GT GY APE+ R
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEIL--RGC 225
Query: 473 GVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLI---YERIEPGNDFQFDGVATE 529
+ D++S G++ ++ + DE D + ++ Y I P +D V+
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISP----WWDEVSLN 281
Query: 530 EEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ + K+++L +P +R + + L+
Sbjct: 282 AKDLVRKLIVL--------DPKKRLTTFQALQ 305
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIILSK--GY 216
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 217 NKAVDWWALGVLIYEMAA 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
+G G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ K++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 399 IARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARG 457
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + AR
Sbjct: 200 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYERIE 516
+ ++APE R + +SDV+S+G+++ E+ + V D C R++
Sbjct: 256 PLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----RLK 308
Query: 517 PGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
G + T E M C PS+RP+ +++E L
Sbjct: 309 EGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 271 EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSR 329
E F++ ES A +R+ LG G +G V + + G A+K+L +
Sbjct: 17 EDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDKQK 71
Query: 330 C----NGEEFINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRN 384
E +NE I + + + L F +++ N ++ E +P G + F H R
Sbjct: 72 VVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRI 128
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
+ A I EYLH + +++ D+KP+N+L+D+ +++DFG AK+ +
Sbjct: 129 GRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 185
Query: 445 KKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ + GT Y+APE+ + G + D ++ G++I EM
Sbjct: 186 GRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 226
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 399 IARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARG 457
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + AR
Sbjct: 202 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYERIE 516
+ ++APE R + +SDV+S+G+++ E+ + V D C R++
Sbjct: 258 PLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----RLK 310
Query: 517 PGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
G + T E M C PS+RP+ +++E L
Sbjct: 311 EGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 297 FRDKLGQGGYGEV-----YKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSH 347
R+ LG+G +G+V YK + Q VA+K + + E++ + H
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 348 VNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH 407
+I+ ++ E D + R + E + +Q I +EY H
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQ---QIICAIEYCH 125
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
R +IVH D+KP+N+LLD++ KI+DFGL+ + + G+ Y APEV
Sbjct: 126 RH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVI 179
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDE 500
+ + + DV+S G+++ M+ DDE
Sbjct: 180 NGKLYA-GPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 46/249 (18%)
Query: 299 DKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE------FINEVASISRTSHVNIVT 352
+K+G+G YG V+K + + + + LK R + ++ + E+ + H NIV
Sbjct: 8 EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+ +KK L++E + L K+ + N L+ + + + +GL + H
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFCH---SR 120
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
++H D+KPQN+L++ + K++DFGLA+ S T+ Y P+V FG
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA--EVVTLWYRPPDVL---FG 175
Query: 473 GVSHKS--DVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGND--------FQ 522
+ + D++S G + E+ + L PGND F+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPL------------------FPGNDVDDQLKRIFR 217
Query: 523 FDGVATEEE 531
G TEE+
Sbjct: 218 LLGTPTEEQ 226
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 271 EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSR 329
E F++ ES A +R+ LG G +G V + + G A+K+L +
Sbjct: 25 EDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 330 C----NGEEFINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRN 384
E +NE I + + + L F +++ N ++ E +P G + F H R
Sbjct: 80 VVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRI 136
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
+ A I EYLH + +++ D+KP+N+L+D+ +++DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Query: 445 KKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ + GT Y+APE+ + G + D ++ G++I EM
Sbjct: 194 GRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFIN---------EVASISRTSHVNI 350
LG G +G V+ + + V VK +K + + +I E+A +SR H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L L+ E +G LD F DR+ +L+ I + + YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK- 149
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEV 466
I+H DIK +NI++ EDF K+ DFG A ++ + + GTI Y APEV
Sbjct: 150 --DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAPEV 200
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 216
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 217 NKAVDWWALGVLIYEMAA 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ +++DFGLAK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ K++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 216
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 217 NKAVDWWALGVLIYEMAA 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 399 IARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARG 457
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + AR
Sbjct: 207 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYERIE 516
+ ++APE R + +SDV+S+G+++ E+ + V D C R++
Sbjct: 263 PLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----RLK 315
Query: 517 PGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
G + T E M C PS+RP+ +++E L
Sbjct: 316 EGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 271 EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSR 329
E F++ ES A +R+ LG G +G V + + G A+K+L +
Sbjct: 25 EDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 330 C----NGEEFINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRN 384
E +NE I + + + L F +++ N ++ E +P G + F H R
Sbjct: 80 VVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRI 136
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
+ A I EYLH + +++ D+KP+N+L+D+ +++DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Query: 445 KKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ + GT Y+APE+ + G + D ++ G++I EM
Sbjct: 194 GRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 399 IARGLEYL-HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARG 457
+A+G+E+L R C +H D+ +NILL E KI DFGLA+ K + AR
Sbjct: 209 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEV-TDTSICHNLIYERIE 516
+ ++APE R + +SDV+S+G+++ E+ + V D C R++
Sbjct: 265 PLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----RLK 317
Query: 517 PGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEML 563
G + T E M C PS+RP+ +++E L
Sbjct: 318 EGTRMRAPDYTTPE-------MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E +P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ K++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 271 EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSR 329
E F++ ES A +R+ LG G +G V + + G A+K+L +
Sbjct: 25 EDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 330 C----NGEEFINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRN 384
E +NE I + + + L F +++ N ++ E +P G + F H R
Sbjct: 80 VVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRI 136
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
+ A I EYLH + +++ D+KP+N+L+D+ +++DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Query: 445 KKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ + GT Y+APE+ + G + D ++ G++I EM
Sbjct: 194 GRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 271 EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSR 329
E F++ ES A +R+ LG G +G V + + G A+K+L +
Sbjct: 25 EDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 330 C----NGEEFINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRN 384
E +NE I + + + L F +++ N ++ E P G + F H R
Sbjct: 80 VVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRI 136
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
+ A I EYLH + +++ D+KP+N+++D+ K++DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
Query: 445 KKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ + GT Y+APE+ + G + D ++ G++I EM
Sbjct: 194 GRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 271 EAFIRNHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKGELPD-GQLVAVKVLKNSR 329
E F++ ES A +R+ LG G +G V + + G A+K+L +
Sbjct: 45 EDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDKQK 99
Query: 330 C----NGEEFINEVASISRTSHVNIVTFLGFCYENKKNA-LIYELMPNGSLDKFIHNDRN 384
E +NE I + + + L F +++ N ++ E +P G + F H R
Sbjct: 100 VVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRI 156
Query: 385 IKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQ 444
+ A I EYLH + +++ D+KP+N+L+D+ +++DFG AK+ +
Sbjct: 157 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
Query: 445 KKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
+ + GT Y+APE+ + G + D ++ G++I EM
Sbjct: 214 GRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 254
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 35/267 (13%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VAVK++ ++ N ++ EV +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K L+ E G + D + + R + E + ++ I ++Y H Q IV
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCH---QKFIV 135
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS-RRFGGV 474
H D+K +N+LLD D KI+DFG + + + G Y APE++ +++ G
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC---GAPPYAAPELFQGKKYDG- 191
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL--IYERIEPGNDFQFDGVATEEEK 532
+ DV+S G+++ +V + D + NL + ER+ G +T+ E
Sbjct: 192 -PEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGKYRIPFYXSTDCEN 242
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKV 559
+ K +IL NPS+R ++ ++
Sbjct: 243 LLKKFLIL--------NPSKRGTLEQI 261
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVTFLG 355
LG GG EV+ +L D + VAVKVL+ F E + + +H IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 356 FC-YENKKNALIY---ELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E L Y E + +L +H + + K ++ + L + H Q
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---Q 134
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPEVYSRR 470
I+H D+KP NIL+ K+ DFG+A+ A S GT Y++PE R
Sbjct: 135 NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE--QAR 192
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
V +SDVYS G ++ E++
Sbjct: 193 GDSVDARSDVYSLGCVLYEVL 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VAVK++ ++ N ++ EV + +H NIV
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K L+ E G + D + + R + E + ++ I ++Y H Q IV
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKYIV 136
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS-RRFGGV 474
H D+K +N+LLD D KI+DFG + + + G+ Y APE++ +++ G
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---GSPPYAAPELFQGKKYDG- 192
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDE 500
+ DV+S G+++ +V + D +
Sbjct: 193 -PEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVTFLG 355
LG GG EV+ +L D + VAVKVL+ F E + + +H IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 356 FC-YENKKNALIY---ELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E L Y E + +L +H + + K ++ + L + H Q
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---Q 134
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-GTIGYIAPEVYSRR 470
I+H D+KP NI++ K+ DFG+A+ ++++ A GT Y++PE R
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QAR 192
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
V +SDVYS G ++ E++
Sbjct: 193 GDSVDARSDVYSLGCVLYEVL 213
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVTFLG 355
LG GG EV+ +L D + VAVKVL+ F E + + +H IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 356 FC-YENKKNALIY---ELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E L Y E + +L +H + + K ++ + L + H Q
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---Q 134
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-GTIGYIAPEVYSRR 470
I+H D+KP NI++ K+ DFG+A+ ++++ A GT Y++PE R
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QAR 192
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
V +SDVYS G ++ E++
Sbjct: 193 GDSVDARSDVYSLGCVLYEVL 213
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 35/269 (13%)
Query: 301 LGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNG---EEFINEVASISRTSHVNIVTFLGF 356
+G+G + +V + G+ VAVK++ ++ N ++ EV + +H NIV
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 357 CYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K L+ E G + D + + + E + ++ I ++Y H Q IV
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQYCH---QKFIV 128
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS-RRFGGV 474
H D+K +N+LLD D KI+DFG + + + G+ Y APE++ +++ G
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDG- 184
Query: 475 SHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNL--IYERIEPGNDFQFDGVATEEEK 532
+ DV+S G+++ +V + D + NL + ER+ G ++T+ E
Sbjct: 185 -PEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGKYRIPFYMSTDCEN 235
Query: 533 KIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ K +IL NPS+R ++ ++++
Sbjct: 236 LLKKFLIL--------NPSKRGTLEQIMK 256
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFINEVASISRTSH-VNIVTFLGFCY 358
LG G +G V + + G A+K+L + + I + R VN + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 359 ENKKNALIYELM---PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K N+ +Y +M P G + F H R + A I EYLH + ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYN 216
Query: 476 HKSDVYSYGMMIIEMVG 492
D ++ G++I EM
Sbjct: 217 KAVDWWALGVLIYEMAA 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFINEVASISRTSH-VNIVTFLGFCY 358
LG G +G V + + G A+K+L + + I + R VN + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 359 ENKKNALIYELM---PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K N+ +Y +M P G + F H R + A I EYLH + ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYN 216
Query: 476 HKSDVYSYGMMIIEMVG 492
D ++ G++I EM
Sbjct: 217 KAVDWWALGVLIYEMAA 233
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFINEVASISRTSH-VNIVTFLGFCY 358
LG G +G V + + G A+K+L + + I + R VN + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 359 ENKKNALIYELM---PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
K N+ +Y +M P G + F H R + A I EYLH + ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYN 216
Query: 476 HKSDVYSYGMMIIEMVG 492
D ++ G++I EM
Sbjct: 217 KAVDWWALGVLIYEMAA 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 33/228 (14%)
Query: 276 NHESLAPKRYSYSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKN------S 328
+H S+ PK + D M+K+ LG G GEV E + VA+K++ S
Sbjct: 5 SHMSVYPK--ALRDEYIMSKT----LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGS 58
Query: 329 RCNGEEFIN---EVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRN 384
+ +N E+ + + +H I+ F ++ + ++ ELM G L DK + N R
Sbjct: 59 AREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRL 117
Query: 385 IKLEWKT-MYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLA 440
+ K YQ+ + + +YLH I+H D+KP+N+LL +ED KI+DFG +
Sbjct: 118 KEATCKLYFYQMLLAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 170
Query: 441 KQAQKKESAISMLHARGTIGYIAPEVY-SRRFGGVSHKSDVYSYGMMI 487
K E+++ M GT Y+APEV S G + D +S G+++
Sbjct: 171 KIL--GETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E P G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 33/215 (15%)
Query: 295 KSFRDK------LGQGGYGEVYKG-ELPDGQLVAVKVLKN------SRCNGEEFIN---E 338
K+ RD+ LG G GEV E + VA+K++ S + +N E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 339 VASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT-MYQIA 396
+ + + +H I+ F ++ + ++ ELM G L DK + N R + K YQ+
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISML 453
+ + +YLH I+H D+KP+N+LL +ED KI+DFG +K E+++ M
Sbjct: 125 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL-MR 174
Query: 454 HARGTIGYIAPEVY-SRRFGGVSHKSDVYSYGMMI 487
GT Y+APEV S G + D +S G+++
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 33/215 (15%)
Query: 295 KSFRDK------LGQGGYGEVYKG-ELPDGQLVAVKVLKN------SRCNGEEFIN---E 338
K+ RD+ LG G GEV E + VA+K++ S + +N E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 339 VASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT-MYQIA 396
+ + + +H I+ F ++ + ++ ELM G L DK + N R + K YQ+
Sbjct: 65 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISML 453
+ + +YLH I+H D+KP+N+LL +ED KI+DFG +K E+++ M
Sbjct: 124 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MR 173
Query: 454 HARGTIGYIAPEVY-SRRFGGVSHKSDVYSYGMMI 487
GT Y+APEV S G + D +S G+++
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 297 FRDKLGQGGYG--EVYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFL 354
F +G G +G + + +L +LVAVK ++ E E+ + H NIV F
Sbjct: 24 FVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 355 GFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
A+I E G L ++ + R + E + +Q + G+ Y H ++
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ---QLLSGVSYCH---SMQ 136
Query: 414 IVHFDIKPQNILLDEDFCP--KISDFGLAKQAQKKESAISMLHAR-----GTIGYIAPEV 466
I H D+K +N LLD P KI DFG +K S+LH++ GT YIAPEV
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKS--------SVLHSQPKSTVGTPAYIAPEV 188
Query: 467 YSRR-FGGVSHKSDVYSYGMMIIEMV 491
R+ + G +DV+S G+ + M+
Sbjct: 189 LLRQEYDG--KIADVWSCGVTLYVML 212
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 33/215 (15%)
Query: 295 KSFRDK------LGQGGYGEVYKG-ELPDGQLVAVKVLKN------SRCNGEEFIN---E 338
K+ RD+ LG G GEV E + VA+K++ S + +N E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 339 VASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT-MYQIA 396
+ + + +H I+ F ++ + ++ ELM G L DK + N R + K YQ+
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISML 453
+ + +YLH I+H D+KP+N+LL +ED KI+DFG +K E+++ M
Sbjct: 125 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL-MR 174
Query: 454 HARGTIGYIAPEVY-SRRFGGVSHKSDVYSYGMMI 487
GT Y+APEV S G + D +S G+++
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 33/215 (15%)
Query: 295 KSFRDK------LGQGGYGEVYKG-ELPDGQLVAVKVLKN------SRCNGEEFIN---E 338
K+ RD+ LG G GEV E + VA+K++ S + +N E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 339 VASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT-MYQIA 396
+ + + +H I+ F ++ + ++ ELM G L DK + N R + K YQ+
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISML 453
+ + +YLH I+H D+KP+N+LL +ED KI+DFG +K E+++ M
Sbjct: 125 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MR 174
Query: 454 HARGTIGYIAPEVY-SRRFGGVSHKSDVYSYGMMI 487
GT Y+APEV S G + D +S G+++
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFCYE 359
+G+G YGEV++G G+ VAVK+ +SR F E+ + H NI+ F+
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIF-SSRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 360 NKKNA----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR---GCQV 412
++ ++ LI GSL ++ + L+ + +I + IA GL +LH G Q
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 413 R--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH--ARGTIGYIAPEVYS 468
+ I H D+K +NIL+ ++ I+D GLA + + + + + GT Y+APEV
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 219
Query: 469 RRFG----GVSHKSDVYSYGMMIIEM 490
+ D++++G+++ E+
Sbjct: 220 ETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFCYE 359
+G+G YGEV++G G+ VAVK+ +SR F E+ + H NI+ F+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF-SSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 360 NKKNA----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR---GCQV 412
++ ++ LI GSL ++ + L+ + +I + IA GL +LH G Q
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 413 R--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH--ARGTIGYIAPEVYS 468
+ I H D+K +NIL+ ++ I+D GLA + + + + + GT Y+APEV
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 469 RRFG----GVSHKSDVYSYGMMIIEM 490
+ D++++G+++ E+
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEFI-NEVASISRTSHVNIVTFLGFCYE 359
+G+G YGEV++G G+ VAVK+ +SR F E+ + H NI+ F+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF-SSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 360 NKKNA----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR---GCQV 412
++ ++ LI GSL ++ + L+ + +I + IA GL +LH G Q
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 413 R--IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLH--ARGTIGYIAPEVYS 468
+ I H D+K +NIL+ ++ I+D GLA + + + + + GT Y+APEV
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 469 RRFG----GVSHKSDVYSYGMMIIEM 490
+ D++++G+++ E+
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Query: 300 KLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGE---EFINEVASISRTSHVNIVTFLG 355
+LG+G + V + GQ A K LK R + E ++E+A + V L
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
YEN LI E G + + + + ++ I G+ YLH Q I
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNI 152
Query: 415 VHFDIKPQNILLDEDFCP---KISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
VH D+KPQNILL + KI DFG+++ K A + GT Y+APE+ + +
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAPEILN--Y 207
Query: 472 GGVSHKSDVYSYGMM 486
++ +D+++ G++
Sbjct: 208 DPITTATDMWNIGII 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 33/215 (15%)
Query: 295 KSFRDK------LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC------NGEEFIN---E 338
K+ RD+ LG G GEV E + VA++++ + + +N E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 339 VASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT-MYQIA 396
+ + + +H I+ F ++ + ++ ELM G L DK + N R + K YQ+
Sbjct: 205 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 263
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISML 453
+ + +YLH I+H D+KP+N+LL +ED KI+DFG +K E+++ M
Sbjct: 264 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL-MR 313
Query: 454 HARGTIGYIAPEVY-SRRFGGVSHKSDVYSYGMMI 487
GT Y+APEV S G + D +S G+++
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 348
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 321 AVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFI 379
AVK++ S+ + E I + + H NI+T + K ++ EL G L DK +
Sbjct: 51 AVKIIDKSKRDPTEEIEIL--LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL 108
Query: 380 HNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNIL-LDEDFCP---KIS 435
R + + I + +EYLH +VH D+KP NIL +DE P +I
Sbjct: 109 ---RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRIC 162
Query: 436 DFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMI 487
DFG AKQ + + + T ++APEV R+ G D++S G+++
Sbjct: 163 DFGFAKQLRAENGLLXT--PCYTANFVAPEVLERQ--GYDAACDIWSLGVLL 210
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 33/215 (15%)
Query: 295 KSFRDK------LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC------NGEEFIN---E 338
K+ RD+ LG G GEV E + VA++++ + + +N E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 339 VASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-DKFIHNDRNIKLEWKT-MYQIA 396
+ + + +H I+ F ++ + ++ ELM G L DK + N R + K YQ+
Sbjct: 191 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249
Query: 397 IGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISML 453
+ + +YLH I+H D+KP+N+LL +ED KI+DFG +K E+++ M
Sbjct: 250 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL-MR 299
Query: 454 HARGTIGYIAPEVY-SRRFGGVSHKSDVYSYGMMI 487
GT Y+APEV S G + D +S G+++
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRT---SHVNIVTFLGF 356
LG+G +G+V E G+ A+K+LK ++ + + +R S +T L +
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 357 CYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ + + + E G L F H R I L+YLH + +V
Sbjct: 216 SFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 271
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+K +N++LD+D KI+DFGL K+ K +M GT Y+APEV G +
Sbjct: 272 YRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGRA 329
Query: 476 HKSDVYSYGMMIIEMV 491
D + G+++ EM+
Sbjct: 330 --VDWWGLGVVMYEMM 343
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRT---SHVNIVTFLGF 356
LG+G +G+V E G+ A+K+LK ++ + + +R S +T L +
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 357 CYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ + + + E G L F H R I L+YLH + +V
Sbjct: 219 SFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 274
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+K +N++LD+D KI+DFGL K+ K +M GT Y+APEV G +
Sbjct: 275 YRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGRA 332
Query: 476 HKSDVYSYGMMIIEMV 491
D + G+++ EM+
Sbjct: 333 --VDWWGLGVVMYEMM 346
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRT---SHVNIVTFLGF 356
LG+G +G+V E G+ A+K+LK ++ + + +R S +T L +
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 357 CYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ + + + E G L F H R I L+YLH + +V
Sbjct: 78 SFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 133
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+K +N++LD+D KI+DFGL K+ K +M GT Y+APEV G +
Sbjct: 134 YRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYGRA 191
Query: 476 HKSDVYSYGMMIIEMV 491
D + G+++ EM+
Sbjct: 192 --VDWWGLGVVMYEMM 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRT---SHVNIVTFLGF 356
LG+G +G+V E G+ A+K+LK ++ + + +R S +T L +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 357 CYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ + + + E G L F H R I L+YLH + +V
Sbjct: 76 SFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 131
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+K +N++LD+D KI+DFGL K+ K +M GT Y+APEV G +
Sbjct: 132 YRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 476 HKSDVYSYGMMIIEMV 491
D + G+++ EM+
Sbjct: 190 --VDWWGLGVVMYEMM 203
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 46/249 (18%)
Query: 299 DKLGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEE------FINEVASISRTSHVNIVT 352
+K+G+G YG V+K + + + + LK R + ++ + E+ + H NIV
Sbjct: 8 EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+ +KK L++E + L K+ + N L+ + + + +GL + H
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFCH---SR 120
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG 472
++H D+KPQN+L++ + K+++FGLA+ S T+ Y P+V FG
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA--EVVTLWYRPPDVL---FG 175
Query: 473 GVSHKS--DVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGND--------FQ 522
+ + D++S G + E+ + L PGND F+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPL------------------FPGNDVDDQLKRIFR 217
Query: 523 FDGVATEEE 531
G TEE+
Sbjct: 218 LLGTPTEEQ 226
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRT---SHVNIVTFLGF 356
LG+G +G+V E G+ A+K+LK ++ + + +R S +T L +
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 357 CYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
++ + + + E G L F H R I L+YLH + +V
Sbjct: 77 SFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 132
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+K +N++LD+D KI+DFGL K+ K +M GT Y+APEV G +
Sbjct: 133 YRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 476 HKSDVYSYGMMIIEMV 491
D + G+++ EM+
Sbjct: 191 --VDWWGLGVVMYEMM 204
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVK-VLKNSRCNGEEF--INEVASISRTSHVNIVTFLG 355
K+GQG +GEV+K GQ VA+K VL + G + E+ + H N+V +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 356 FCYE-----NKKNALIYELMP--NGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
C N+ A IY + L + N +K + ++ + GL Y+HR
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK 441
+I+H D+K N+L+ D K++DFGLA+
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 94
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 149
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+DE +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 202
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 203 NKAVDWWALGVLIYEMAA 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 301 LGQGGYGEVYKGELP-DGQLVAVKVLKNSRCNGEEFIN----EVASISRTSHVNIVTFLG 355
LG+G +G+V E +L AVK+LK ++ + E ++ +T L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
C++ + E + G L I K Y A IA GL +L I
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY--AAEIAIGLFFLQSKG---I 463
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+K N++LD + KI+DFG+ K + ++ GT YIAPE+ + + G
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 475 SHKSDVYSYGMMIIEMVGCTKNL----DDEVTDTSICHNLIYER 514
S D +++G+++ EM+ +DE+ + + HN+ Y +
Sbjct: 522 S--VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK 563
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + ++ GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 287 YSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCN-GEEFINEVASISR 344
+ DV ++ + D LG+G + V L Q AVK+++ + EV + +
Sbjct: 10 FEDVYQLQE---DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQ 66
Query: 345 -TSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNI-KLEWKTMYQIAIGIARG 402
H N++ + F E + L++E M GS+ IH R+ +LE + Q +A
Sbjct: 67 CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASA 123
Query: 403 LEYLH-RGCQVRIVHFDIKPQNILLDE--DFCP-KISDFGLAKQAQ-----KKESAISML 453
L++LH +G I H D+KP+NIL + P KI DFGL + S +L
Sbjct: 124 LDFLHNKG----IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL 179
Query: 454 HARGTIGYIAPEV---YSRRFGGVSHKSDVYSYGMMIIEMVG--------CTKNLD-DEV 501
G+ Y+APEV +S + D++S G+++ ++ C + D
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG 239
Query: 502 TDTSICHNLIYERIEPGN----DFQFDGVATEEEKKIAKMMI 539
C N+++E I+ G D + ++ + I+K+++
Sbjct: 240 EACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISR----TSHVNIVTFLG 355
LG+G +G+V E G+ A+K+L+ ++ + + SR T H +T L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 356 FCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ + + + E G L + +R E Y I LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLH---SRDV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ DIK +N++LD+D KI+DFGL K+ +M GT Y+APEV G
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 475 SHKSDVYSYGMMIIEMV 491
+ D + G+++ EM+
Sbjct: 185 A--VDWWGLGVVMYEMM 199
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVTFLG 355
LG GG EV+ +L + VAVKVL+ F E + + +H IV
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 356 FC-YENKKNALIY---ELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E L Y E + +L +H + + K ++ + L + H Q
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---Q 134
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-GTIGYIAPEVYSRR 470
I+H D+KP NI++ K+ DFG+A+ ++++ A GT Y++PE R
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QAR 192
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
V +SDVYS G ++ E++
Sbjct: 193 GDSVDARSDVYSLGCVLYEVL 213
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISR----TSHVNIVTFLG 355
LG+G +G+V E G+ A+K+L+ ++ + + SR T H +T L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 356 FCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ + + + E G L + +R E Y I LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLH---SRDV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ DIK +N++LD+D KI+DFGL K+ +M GT Y+APEV G
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 475 SHKSDVYSYGMMIIEMV 491
+ D + G+++ EM+
Sbjct: 185 A--VDWWGLGVVMYEMM 199
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISR----TSHVNIVTFLG 355
LG+G +G+V E G+ A+K+L+ ++ + + SR T H +T L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 74
Query: 356 FCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ + + + E G L + +R E Y I LEYLH +
Sbjct: 75 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLH---SRDV 129
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ DIK +N++LD+D KI+DFGL K+ +M GT Y+APEV G
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFCGTPEYLAPEVLEDNDYGR 187
Query: 475 SHKSDVYSYGMMIIEMV 491
+ D + G+++ EM+
Sbjct: 188 A--VDWWGLGVVMYEMM 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISR----TSHVNIVTFLG 355
LG+G +G+V E G+ A+K+L+ ++ + + SR T H +T L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 356 FCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ + + + E G L + +R E Y I LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLH---SRDV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ DIK +N++LD+D KI+DFGL K+ +M GT Y+APEV G
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 475 SHKSDVYSYGMMIIEMV 491
+ D + G+++ EM+
Sbjct: 185 A--VDWWGLGVVMYEMM 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISR----TSHVNIVTFLG 355
LG+G +G+V E G+ A+K+L+ ++ + + SR T H +T L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 356 FCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ + + + E G L + +R E Y I LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLH---SRDV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ DIK +N++LD+D KI+DFGL K+ +M GT Y+APEV G
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 475 SHKSDVYSYGMMIIEMV 491
+ D + G+++ EM+
Sbjct: 185 A--VDWWGLGVVMYEMM 199
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISR----TSHVNIVTFLG 355
LG+G +G+V E G+ A+K+L+ ++ + + SR T H +T L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 356 FCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ + + + E G L + +R E Y I LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLH---SRDV 126
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ DIK +N++LD+D KI+DFGL K+ +M GT Y+APEV G
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 475 SHKSDVYSYGMMIIEMV 491
+ D + G+++ EM+
Sbjct: 185 A--VDWWGLGVVMYEMM 199
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 301 LGQGGYGEVYKGELP-DGQLVAVKVLKNSRCNGEEFIN----EVASISRTSHVNIVTFLG 355
LG+G +G+V E +L AVK+LK ++ + E ++ +T L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
C++ + E + G L I K Y A IA GL +L I
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY--AAEIAIGLFFLQSKG---I 142
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+K N++LD + KI+DFG+ K + ++ GT YIAPE+ + + G
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 475 SHKSDVYSYGMMIIEMVGCTKNL----DDEVTDTSICHNLIYER 514
S D +++G+++ EM+ +DE+ + + HN+ Y +
Sbjct: 201 S--VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK 242
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISR----TSHVNIVTFLG 355
LG+G +G+V E G+ A+K+L+ ++ + + SR T H +T L
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 76
Query: 356 FCYE-NKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
+ ++ + + + E G L + +R E Y I LEYLH +
Sbjct: 77 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLH---SRDV 131
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
V+ DIK +N++LD+D KI+DFGL K+ +M GT Y+APEV G
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 475 SHKSDVYSYGMMIIEMV 491
+ D + G+++ EM+
Sbjct: 190 A--VDWWGLGVVMYEMM 204
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 318 QLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-D 376
+LVAVK ++ E E+ + H NIV F A++ E G L +
Sbjct: 45 ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 377 KFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP--KI 434
+ + R + E + +Q I G+ Y H +++ H D+K +N LLD P KI
Sbjct: 105 RICNAGRFSEDEARFFFQQLIS---GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKI 158
Query: 435 SDFGLAKQAQKKESAISMLHAR-----GTIGYIAPEVYSRR-FGGVSHKSDVYSYGMMI- 487
+DFG +K S+LH++ GT YIAPEV ++ + G +DV+S G+ +
Sbjct: 159 ADFGYSKA--------SVLHSQPKSAVGTPAYIAPEVLLKKEYDG--KVADVWSCGVTLY 208
Query: 488 IEMVGCTKNLDDE 500
+ +VG D E
Sbjct: 209 VMLVGAYPFEDPE 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVK-VLKNSRCNGEEF--INEVASISRTSHVNIVTFLG 355
K+GQG +GEV+K GQ VA+K VL + G + E+ + H N+V +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 356 FCYE-----NKKNALIYELMP--NGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
C N+ IY + L + N +K + ++ + GL Y+HR
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK 441
+I+H D+K N+L+ D K++DFGLA+
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VA+K L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I ++L+ + M + + G+++LH I+H D+KP NI++ D
Sbjct: 112 -DANLXQVIQ----MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDX 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EMV
Sbjct: 217 EMV 219
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 298 RDKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT-SHVNIVTF 353
+++LG+G + V + G A K++ + + +F + A I R H NIV
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
E + L+++L+ G L + I + E+ + + I + LE +
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 414 IVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
IVH ++KP+N+LL + K++DFGLA + E+ GT GY++PEV +
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLSPEVLKK- 180
Query: 471 FGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-DF---QFDG 525
S D+++ G+++ I +VG D++ + +Y +I+ G D+ ++D
Sbjct: 181 -DPYSKPVDIWACGVILYILLVGYPPFWDED-------QHRLYAQIKAGAYDYPSPEWDT 232
Query: 526 VATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEM 562
V E + I M+ + NP +R + + L++
Sbjct: 233 VTPEAKSLIDSMLTV--------NPKKRITADQALKV 261
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVTFLG 355
LG+G +G+V + + G L AVKVLK ++ + E +S + +T L
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIV 415
C++ NG D H ++ + + A I L +LH I+
Sbjct: 91 CCFQTPDRLFFVMEFVNGG-DLMFHIQKSRRFDEARARFYAAEIISALMFLH---DKGII 146
Query: 416 HFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVS 475
+ D+K N+LLD + K++DFG+ K+ + ++ GT YIAPE+ G +
Sbjct: 147 YRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTATFCGTPDYIAPEILQEMLYGPA 204
Query: 476 HKSDVYSYGMMIIEMV 491
D ++ G+++ EM+
Sbjct: 205 --VDWWAMGVLLYEML 218
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 298 RDKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT-SHVNIVTF 353
+++LG+G + V + G A K++ + + +F + A I R H NIV
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
E + L+++L+ G L + I + E+ + + I + LE +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 414 IVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
IVH ++KP+N+LL + K++DFGLA + E+ GT GY++PEV +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLSPEVLKK- 181
Query: 471 FGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-DF---QFDG 525
S D+++ G+++ I +VG D++ + +Y +I+ G D+ ++D
Sbjct: 182 -DPYSKPVDIWACGVILYILLVGYPPFWDED-------QHRLYAQIKAGAYDYPSPEWDT 233
Query: 526 VATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEM 562
V E + I M+ + NP +R + + L++
Sbjct: 234 VTPEAKSLIDSMLTV--------NPKKRITADQALKV 262
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 298 RDKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT-SHVNIVTF 353
+++LG+G + V + G A K++ + + +F + A I R H NIV
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
E + L+++L+ G L + I + E+ + + I + LE +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 414 IVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
IVH ++KP+N+LL + K++DFGLA + E+ GT GY++PEV +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKK- 181
Query: 471 FGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-DF---QFDG 525
S D+++ G+++ I +VG D++ + +Y +I+ G D+ ++D
Sbjct: 182 -DPYSKPVDIWACGVILYILLVGYPPFWDED-------QHRLYAQIKAGAYDYPSPEWDT 233
Query: 526 VATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEM 562
V E + I M+ + NP +R + + L++
Sbjct: 234 VTPEAKSLIDSMLTV--------NPKKRITADQALKV 262
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVTFLG 355
LG GG EV+ +L + VAVKVL+ F E + + +H IV
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 356 FC-YENKKNALIY---ELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E L Y E + +L +H + + K ++ + L + H Q
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---Q 134
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-GTIGYIAPEVYSRR 470
I+H D+KP NI++ K+ DFG+A+ ++++ A GT Y++PE R
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QAR 192
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
V +SDVYS G ++ E++
Sbjct: 193 GDSVDARSDVYSLGCVLYEVL 213
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEM-VGCTKNLDDEVTDTSICHNLIYERIEPGN 519
+ D ++ G++I EM G DE IYE+I G
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADEPIQ-------IYEKIVSGK 254
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 216
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 217 NKAVDWWALGVLIYEMAA 234
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVK-VLKNSRCNGEEF--INEVASISRTSHVNIVTFLG 355
K+GQG +GEV+K GQ VA+K VL + G + E+ + H N+V +
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 356 FCYE-----NKKNALIYELMP--NGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
C N+ IY + L + N +K + ++ + GL Y+HR
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR 142
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK 441
+I+H D+K N+L+ D K++DFGLA+
Sbjct: 143 N---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 300 KLGQGGYGEVYKGE-LPDGQLVAVK-VLKNSRCNGEEF--INEVASISRTSHVNIVTFLG 355
K+GQG +GEV+K GQ VA+K VL + G + E+ + H N+V +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 356 FCYE-----NKKNALIYELMP--NGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
C N+ IY + L + N +K + ++ + GL Y+HR
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAK 441
+I+H D+K N+L+ D K++DFGLA+
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFAEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 301 LGQGGYGEV---YKGELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFL 354
+G G YG V Y L Q VAVK L S + E+ + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 355 GF-----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEY 405
E+ + + L+ + +D +++ +YQ+ RGL+Y
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF---LVYQLL----RGLKY 146
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+H I+H D+KP N+ ++ED +I DFGLA+QA ++ M T Y APE
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPE 198
Query: 466 VYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ + + D++S G ++ E++
Sbjct: 199 IM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 128
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 183
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 236
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 237 NKAVDWWALGVLIYEMAA 254
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 301 LGQGGYGEV---YKGELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFL 354
+G G YG V Y L Q VAVK L S + E+ + H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 355 GF-----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEY 405
E+ + + L+ + +D +++ +YQ+ RGL+Y
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF---LVYQLL----RGLKY 138
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+H I+H D+KP N+ ++ED +I DFGLA+QA ++ M T Y APE
Sbjct: 139 IHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWYRAPE 190
Query: 466 VYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ + + D++S G ++ E++
Sbjct: 191 IM-LNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 102
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 157
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 210
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 211 NKAVDWWALGVLIYEMAA 228
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 301 LGQGGYGEV---YKGELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFL 354
+G G YG V Y L Q VAVK L S + E+ + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 355 GF-----CYENKKNALIYELMPNGSLDKFIHN----DRNIKLEWKTMYQIAIGIARGLEY 405
E+ + + L+ + + D +++ +YQ+ RGL+Y
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF---LVYQLL----RGLKY 146
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+H I+H D+KP N+ ++ED +I DFGLA+QA ++ M T Y APE
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPE 198
Query: 466 VYSRRFGGVSHKSDVYSYGMMIIEMV 491
+ + + D++S G ++ E++
Sbjct: 199 IM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 394 QIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML 453
I I IA +E+LH ++H D+KP NI D K+ DFGL + E ++L
Sbjct: 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 454 HAR----------GTIGYIAPE-VYSRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVT 502
GT Y++PE ++ + SHK D++S G+++ E++ + V
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNY---SHKVDIFSLGLILFELLYSFSTQMERVR 281
Query: 503 DTSICHNLIYERIEPGNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLE 561
+ NL + + F +E + M+ +P+ERP ++E
Sbjct: 282 IITDVRNLKFPLL-------FTQKYPQEHMMVQDML--------SPSPTERPEATDIIE 325
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFI----NEVASISRTSHVNIVTFLG 355
LG GG EV+ +L + VAVKVL+ F E + + +H IV
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 356 FC-YENKKNALIY---ELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E L Y E + +L +H + + K ++ + L + H Q
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---Q 151
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-GTIGYIAPEVYSRR 470
I+H D+KP NI++ K+ DFG+A+ ++++ A GT Y++PE R
Sbjct: 152 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QAR 209
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
V +SDVYS G ++ E++
Sbjct: 210 GDSVDARSDVYSLGCVLYEVL 230
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 298 RDKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEF--INEVASISRT-SHVNIVTF 353
+++LG+G + V + G A K++ + + +F + A I R H NIV
Sbjct: 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
E + L+++L+ G L + I + E+ + + I + LE +
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNG 148
Query: 414 IVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
IVH ++KP+N+LL + K++DFGLA + E+ GT GY++PEV +
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLSPEVLKK- 204
Query: 471 FGGVSHKSDVYSYGMMI-IEMVGCTKNLDDEVTDTSICHNLIYERIEPGN-DF---QFDG 525
S D+++ G+++ I +VG D++ + +Y +I+ G D+ ++D
Sbjct: 205 -DPYSKPVDIWACGVILYILLVGYPPFWDED-------QHRLYAQIKAGAYDYPSPEWDT 256
Query: 526 VATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVLEM 562
V E + I M+ + NP +R + + L++
Sbjct: 257 VTPEAKSLIDSMLTV--------NPKKRITADQALKV 285
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 26/269 (9%)
Query: 297 FRDK-LGQGGYGEVYK-GELPDGQLVAVKVL-KNSRCNGEEFINEVASISRTSHVNIVTF 353
+DK LG+G + K Q AVK++ K N ++ I + H NIV
Sbjct: 14 LKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE--GHPNIVKL 71
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
++ L+ EL+ G L + I ++ E + Y I + + ++H V
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKHFS-ETEASY-IMRKLVSAVSHMH---DVG 126
Query: 414 IVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
+VH D+KP+N+L +++ KI DFG A+ + T+ Y APE+ ++
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCFTLHYAAPELLNQ- 183
Query: 471 FGGVSHKSDVYSYGMMIIEMVGCT---KNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
G D++S G+++ M+ ++ D +T TS I ++I+ G DF F+G A
Sbjct: 184 -NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE--IMKKIKKG-DFSFEGEA 239
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSM 556
+ + AK +I + +P++R M
Sbjct: 240 WKNVSQEAKDLIQ---GLLTVDPNKRLKM 265
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ +GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIVVKSDA 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G+++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGVIMG 216
Query: 489 EMV 491
EM+
Sbjct: 217 EMI 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ +GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIVVKSDA 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G+++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGVIMG 216
Query: 489 EMV 491
EM+
Sbjct: 217 EMI 219
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 128
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 183
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + GT Y+APE+ + G
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC-----GTPEYLAPEIILSK--GY 236
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 237 NKAVDWWALGVLIYEMAA 254
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 333 EEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHN----DRNIK-- 386
++F NE+ I+ + +T G + +IYE M N S+ KF D+N
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 387 LEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKK 446
+ + + I + Y+H + I H D+KP NIL+D++ K+SDFG ++ K
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 447 ESAISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
+ + +RGT ++ PE +S K D++S G+ + M
Sbjct: 206 K----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI++ L K L+ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I ++L+ + M + + G+++LH I+H D+KP NI++ D
Sbjct: 112 -DANLXQVIQ----MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDX 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EMV
Sbjct: 217 EMV 219
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+++D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIISK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I +M
Sbjct: 216 NKAVDWWALGVLIYQMAA 233
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VA+K L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I ++L+ + M + + G+++LH I+H D+KP NI++ D
Sbjct: 105 -DANLXQVIQ----MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDX 156
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 157 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 209
Query: 489 EMV 491
EMV
Sbjct: 210 EMV 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VA+K L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLXQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDX 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EMV
Sbjct: 217 EMV 219
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G+ VA+K L S + E+ + H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 357 CYENKKNALIYE---LMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
Y+ +MP D + +K + + + + +GL+Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG--- 146
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG 473
+VH D+KP N+ ++ED KI DFGLA+ A + + + T Y APEV +
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV-----TRWYRAPEVI-LSWMH 200
Query: 474 VSHKSDVYSYGMMIIEMV 491
+ D++S G ++ EM+
Sbjct: 201 YNQTVDIWSVGCIMAEML 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYE 359
+G G +G + +LVAVK ++ E E+ + H NIV F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 360 NKKNALIYELMPNGSL-DKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFD 418
A++ E G L ++ + R + E + +Q I G+ Y H +++ H D
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---GVSYCH---AMQVCHRD 139
Query: 419 IKPQNILLDEDFCP--KISDFGLAKQAQKKESAISMLHAR-----GTIGYIAPEVYSRR- 470
+K +N LLD P KI DFG +K S+LH++ GT YIAPEV ++
Sbjct: 140 LKLENTLLDGSPAPRLKICDFGYSKS--------SVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
+ G +DV+S G+ + M+
Sbjct: 192 YDG--KVADVWSCGVTLYVML 210
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 300 KLGQGGYGEVYKG-ELPDGQLVAVK----VLKNSRCNGEEFINEVASISRTS-HVNIVTF 353
KLG+G YG V+K + G++VAVK +NS + + E+ ++ S H NIV
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS-TDAQRTFREIMILTELSGHENIVNL 74
Query: 354 LGFCY-ENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
L +N ++ L+++ M L I R LE + + + ++YLH G
Sbjct: 75 LNVLRADNDRDVYLVFDYMET-DLHAVI---RANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAK 441
++H D+KP NILL+ + K++DFGL++
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 39/282 (13%)
Query: 287 YSDVKRMTKSFRDKLGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCN-GEEFINEVASISR 344
+ DV ++ + D LG+G + V L Q AVK+++ + EV + +
Sbjct: 10 FEDVYQLQE---DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQ 66
Query: 345 -TSHVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNI-KLEWKTMYQIAIGIARG 402
H N++ + F E + L++E M GS+ IH R+ +LE + Q +A
Sbjct: 67 CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASA 123
Query: 403 LEYLH-RGCQVRIVHFDIKPQNILLDE--DFCP-KISDFGLAKQAQ-----KKESAISML 453
L++LH +G I H D+KP+NIL + P KI DF L + S +L
Sbjct: 124 LDFLHNKG----IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 454 HARGTIGYIAPEV---YSRRFGGVSHKSDVYSYGMMIIEMVG--------CTKNLD-DEV 501
G+ Y+APEV +S + D++S G+++ ++ C + D
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG 239
Query: 502 TDTSICHNLIYERIEPGN----DFQFDGVATEEEKKIAKMMI 539
C N+++E I+ G D + ++ + I+K+++
Sbjct: 240 EACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT Y+AP + + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPAIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 297 FRD--KLGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNI 350
+RD +G G YG V + G VA+K L S + E+ + H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 351 VTFLG-FCYENKKNAL--IYELMP--NGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEY 405
+ L F + + Y +MP L K + ++ KL + + + +GL Y
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRY 143
Query: 406 LHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPE 465
+H I+H D+KP N+ ++ED KI DFGLA+QA + M T Y APE
Sbjct: 144 IHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPE 195
Query: 466 VYSRRFGGVSHKSDVYSYGMMIIEMV 491
V + + D++S G ++ EM+
Sbjct: 196 VIL-NWMRYTQTVDIWSVGCIMAEMI 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ +GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIVVKSDA 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EM+
Sbjct: 217 EMI 219
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNG------------EEFINEVASISRTSHV 348
+ G YG V G +G VA+K + N+ +G + + E+ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 349 NIVTFLGFCYENKKNA-----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
NI+ ++ A L+ ELM L + IH+ R I + + + I GL
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQR-IVISPQHIQYFMYHILLGL 147
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
LH +VH D+ P NILL ++ I DF LA++ + + R Y A
Sbjct: 148 HVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRA 201
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEM 490
PE+ +F G + D++S G ++ EM
Sbjct: 202 PELVM-QFKGFTKLVDMWSAGCVMAEM 227
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VA+K L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDX 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EMV
Sbjct: 217 EMV 219
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNG------------EEFINEVASISRTSHV 348
+ G YG V G +G VA+K + N+ +G + + E+ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 349 NIVTFLGFCYENKKNA-----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGL 403
NI+ ++ A L+ ELM L + IH+ R I + + + I GL
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQR-IVISPQHIQYFMYHILLGL 147
Query: 404 EYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIA 463
LH +VH D+ P NILL ++ I DF LA++ + + R Y A
Sbjct: 148 HVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRA 201
Query: 464 PEVYSRRFGGVSHKSDVYSYGMMIIEM 490
PE+ +F G + D++S G ++ EM
Sbjct: 202 PELVM-QFKGFTKLVDMWSAGCVMAEM 227
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 138
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + + T Y APE+
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-----ATRWYRAPEIM 190
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 191 -LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + + T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-----ATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 149
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ +A M T Y APE+
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWYRAPEIM 201
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 202 -LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARG 457
I RGL+Y+H ++H D+KP N+LL+ KI DFGLA+ A L
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
T Y APE+ G + D++S G ++ EM+
Sbjct: 190 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLS 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 36/230 (15%)
Query: 282 PKRYSYSDVKRMTKSFRDK--LGQGGYGEVYKG-ELPDGQLVAVKVLK--NSRCNGEEFI 336
PKR Y+ ++ F+ K LG+G YG V P G++VA+K ++ + +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 337 NEVASISRTSHVNIVTFLGF----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLE 388
E+ + H NI+T +EN I + + L + I +D +I+
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY- 116
Query: 389 WKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
+YQ R ++ LH ++H D+KP N+L++ + K+ DFGLA+ + +
Sbjct: 117 --FIYQTL----RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 449 AIS--------MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
S M+ T Y APEV S DV+S G ++ E+
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + + T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-----ATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 357 -----CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E + + + L+ + + KL + + I RGL+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCAKLTDDHVQFLIYQILRGLKYIHSA-- 140
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+ +
Sbjct: 141 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM-LNW 193
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+ D++S G ++ E++
Sbjct: 194 MHYNQTVDIWSVGCIMAELL 213
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 162
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIM 214
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 215 -LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E + + + L+ + + KL + + I RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+ +
Sbjct: 145 -DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM-LNW 197
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+ D++S G ++ E++
Sbjct: 198 MHYNQTVDIWSVGCIMAELL 217
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 25/186 (13%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VAVK L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + IH + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIHMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG-GVSHKSDVYSYGMMIIE 489
KI DFGLA+ A + M T Y APEV G G + D++S G ++ E
Sbjct: 164 TLKILDFGLARTAC---TNFMMTPYVVTRYYRAPEVI---LGMGYAANVDIWSVGCIMGE 217
Query: 490 MV-GCT 494
+V GC
Sbjct: 218 LVKGCV 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 149
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ +A M T Y APE+
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWYRAPEIM 201
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 202 -LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 300 KLGQGGYGEVYKGELPD-GQLVAVKVLKNSRCN---GEEFINEVASISRTSHVNIVTFLG 355
K+G+G YG V+K D GQ+VA+K S + + + E+ + + H N+V L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNI------KLEWKTMYQIAIGIARGLEYLHRG 409
++ L++E + L + R + + W+T+ + + + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTL--------QAVNFCHKH 121
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAK 441
+H D+KP+NIL+ + K+ DFG A+
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFAR 150
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 31 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 143
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 202
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 147
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 199
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 200 -LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 149
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ +A M T Y APE+
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWYRAPEIM 201
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 202 -LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 282 PKRYSYSDVKRMTKSFRDK--LGQGGYGEVYKG-ELPDGQLVAVKVLK--NSRCNGEEFI 336
PKR Y+ ++ F+ K LG+G YG V P G++VA+K ++ + +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 337 NEVASISRTSHVNIVTFLGF----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLE 388
E+ + H NI+T +EN I + + L + I +D +I+
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY- 116
Query: 389 WKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
+YQ R ++ LH ++H D+KP N+L++ + K+ DFGLA+ + +
Sbjct: 117 --FIYQTL----RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 449 AIS--------MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
S M T Y APEV S DV+S G ++ E+
Sbjct: 168 DNSEPTGQQSGMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 138
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 190
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 191 -LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 152
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 153 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 204
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 205 -LNWMHYNQTVDIWSVGCIMAELL 227
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VAVK L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + IH + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 110 -DANLCQVIHMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 161
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A + M T Y APEV G+ +K D++S G ++
Sbjct: 162 TLKILDFGLARTA---STNFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 214
Query: 489 EMV 491
E+V
Sbjct: 215 ELV 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 301 LGQGGYGEVYKGELPD-GQLVAVKVLKNSRC----NGEEFINEVASISRTSHVNIVTFLG 355
LG G +G V + + G A+K+L + E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 356 FCYENKKNA-LIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
F +++ N ++ E + G + F H R + A I EYLH + +
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGV 474
++ D+KP+N+L+D+ +++DFG AK+ + + + GT +APE+ + G
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEALAPEIILSK--GY 215
Query: 475 SHKSDVYSYGMMIIEMVG 492
+ D ++ G++I EM
Sbjct: 216 NKAVDWWALGVLIYEMAA 233
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G+ VA+K L S + E+ + H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 357 CYENKKNALIYE---LMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
Y+ +MP D + ++ + + + + +GL+Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG--- 164
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGG 473
+VH D+KP N+ ++ED KI DFGLA+ A + + + T Y APEV +
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV-----TRWYRAPEVI-LSWMH 218
Query: 474 VSHKSDVYSYGMMIIEMV 491
+ D++S G ++ EM+
Sbjct: 219 YNQTVDIWSVGCIMAEML 236
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 318 QLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-D 376
+LVAVK ++ E+ + H NIV F A++ E G L +
Sbjct: 45 ELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 377 KFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP--KI 434
+ + R + E + +Q I G+ Y H +++ H D+K +N LLD P KI
Sbjct: 105 RICNAGRFSEDEARFFFQQLIS---GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKI 158
Query: 435 SDFGLAKQAQKKESAISMLHAR-----GTIGYIAPEVYSRR-FGGVSHKSDVYSYGMMI- 487
DFG +K S+LH++ GT YIAPEV ++ + G +DV+S G+ +
Sbjct: 159 CDFGYSKS--------SVLHSQPKSTVGTPAYIAPEVLLKKEYDG--KVADVWSCGVTLY 208
Query: 488 IEMVGCTKNLDDE 500
+ +VG D E
Sbjct: 209 VMLVGAYPFEDPE 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 148
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 200
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 201 -LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 35 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 147
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-GTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS- 206
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 36 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 148
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHAR-GTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS- 207
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 208 KGYTKSIDIWSVGCILAEMLS 228
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 147
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 199
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 200 -LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARG 457
I RGL+Y+H ++H D+KP N+LL+ KI DFGLA+ A L
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
T Y APE+ G + D++S G ++ EM+
Sbjct: 190 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLS 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARG 457
I RGL+Y+H ++H D+KP N+LL+ KI DFGLA+ A L
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
T Y APE+ G + D++S G ++ EM+
Sbjct: 194 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLS 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK--NSRCNGEEFINEVASISRTSHVNIV----TF 353
+G+G YG V + + VA+K + + + + E+ + R H NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 354 LGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVR 413
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA---N 148
Query: 414 IVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRFG 472
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS-K 207
Query: 473 GVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 299 DKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEFI--NEVASISRTSHVNIVTFLG 355
++LG G +G V++ E G++ K + N+ +++ NE++ +++ H ++
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFI-NTPYPLDKYTVKNEISIMNQLHHPKLINLHD 115
Query: 356 FCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIAR----GLEYLHRGCQ 411
+ + LI E + G L DR ++K I R GL+++H
Sbjct: 116 AFEDKYEMVLILEFLSGGEL-----FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS- 169
Query: 412 VRIVHFDIKPQNILLDEDFCP--KISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSR 469
IVH DIKP+NI+ + KI DFGLA + E + + A T + APE+ R
Sbjct: 170 --IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTA--TAEFAAPEIVDR 224
Query: 470 RFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVATE 529
V +D+++ G++ ++ E D N+ D++FD A
Sbjct: 225 E--PVGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLETLQNV------KRCDWEFDEDAFS 275
Query: 530 EEKKIAKMMILVGFWCIQTNPSERPSMHKVLEM--LEGSIENL 570
AK I +Q P +R ++H LE L+G NL
Sbjct: 276 SVSPEAKDFIKN---LLQKEPRKRLTVHDALEHPWLKGDHSNL 315
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 161
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 162 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 213
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 214 -LNWMHYNQTVDIWSVGCIMAELL 236
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 31 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 143
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 202
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 162
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 214
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 215 -LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 299 DKLGQGGYGEVYK--GELPDGQLVAVKVLKNSRCNGEEFINEVASISR------TSHVNI 350
D LG+G +G+V + G+ VAVK++KN E +E+ + S
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRC 79
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
V L + + +++EL+ + D FI + + + ++A I + + +LH
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYD-FIKENGFLPFRLDHIRKMAYQICKSVNFLHSN- 137
Query: 411 QVRIVHFDIKPQNILL-----DEDFCPKIS--------------DFGLAKQAQKKESAIS 451
++ H D+KP+NIL E + PKI DFG A + S +
Sbjct: 138 --KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLV 195
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
T Y APEV G S DV+S G ++IE
Sbjct: 196 -----STRHYRAPEVILAL--GWSQPCDVWSIGCILIE 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARG 457
I RGL+Y+H ++H D+KP N+LL+ KI DFGLA+ A L
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
T Y APE+ G + D++S G ++ EM+
Sbjct: 210 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEML 242
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 301 LGQGGYGEVYK-GELPDGQLVAVKVL---KNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG K DG+++ K L + + ++EV + H NIV +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 357 CYENKKNAL--IYELMPNGSLDKFIHNDRNIK--LEWKTMYQIAIGIARGLEYLHRGCQV 412
+ L + E G L I + L+ + + ++ + L+ HR
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 413 --RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
++H D+KP N+ LD K+ DFGLA+ E GT Y++PE +R
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVGTPYYMSPEQMNRM 191
Query: 471 FGGVSHKSDVYSYGMMIIEM 490
+ KSD++S G ++ E+
Sbjct: 192 --SYNEKSDIWSLGCLLYEL 209
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E + + + L+ + + KL + + I RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+ +
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM-LNW 197
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+ D++S G ++ E++
Sbjct: 198 MHYNQTVDIWSVGCIMAELL 217
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 35 IGEGAYGMVCSA-YDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 147
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 206
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 297 FRDKLGQGGYGEVYKGELPDGQLV-AVKVLKNS----RCNGEEFINEVASISRTSHVNIV 351
F +G+G +G+V ++ AVKVL+ + + ++E + + +
Sbjct: 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 352 TFLGFCYEN-KKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
L F ++ K + + + G L + +R LE + + A IA L YLH
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF-LEPRARF-YAAEIASALGYLH--- 156
Query: 411 QVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
+ IV+ D+KP+NILLD ++DFGL K+ + S S GT Y+APEV ++
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF--CGTPEYLAPEVLHKQ 214
Query: 471 FGGVSHKSDVYSYGMMIIEMV 491
D + G ++ EM+
Sbjct: 215 --PYDRTVDWWCLGAVLYEML 233
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 33 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 91
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 145
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 204
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 205 KGYTKSIDIWSVGCILAEMLS 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARG 457
I RGL+Y+H ++H D+KP N+LL+ KI DFGLA+ A L
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
T Y APE+ G + D++S G ++ EM+
Sbjct: 192 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLS 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 153
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 154 SA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 205
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 206 -LNWMHYNQTVDIWSVGCIMAELL 228
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 282 PKRYSYSDVKRMTKSFRDK--LGQGGYGEVYKG-ELPDGQLVAVKVLK--NSRCNGEEFI 336
PKR Y+ ++ F+ K LG+G YG V P G++VA+K ++ + +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 337 NEVASISRTSHVNIVTFLGF----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLE 388
E+ + H NI+T +EN I + + L + I +D +I+
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY- 116
Query: 389 WKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKES 448
+YQ R ++ LH ++H D+KP N+L++ + K+ DFGLA+ + +
Sbjct: 117 --FIYQTL----RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 449 AIS--------MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEM 490
S M T Y APEV S DV+S G ++ E+
Sbjct: 168 DNSEPTGQQSGMTEYVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 144
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 196
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 197 -LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARG 457
I RGL+Y+H ++H D+KP N+LL+ KI DFGLA+ A L
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
T Y APE+ G + D++S G ++ EM+
Sbjct: 192 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLS 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARG 457
I RGL+Y+H ++H D+KP N+LL+ KI DFGLA+ A L
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMVG 492
T Y APE+ G + D++S G ++ EM+
Sbjct: 194 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 36 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 148
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 207
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 208 KGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 37 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 149
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 150 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 208
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 209 KGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 28 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 140
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 141 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 199
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 200 KGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 35 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 147
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 206
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 301 LGQGGYGEVYKGELPDGQLV-AVKVLKNSRCNGEEFIN--EVASISRTSHVNI------V 351
+G+G +GEV +L + V A+K+L N E + E A V + +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKIL-----NKWEMLKRAETACFREERDVLVNGDSKWI 136
Query: 352 TFLGFCYENKKNA-LIYELMPNGSLDKFIHN-DRNIKLEWKTMYQIAIGIARGLEYLHRG 409
T L + +++ N L+ + G L + + + E Y + IA ++ +H
Sbjct: 137 TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIA--IDSVH-- 192
Query: 410 CQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSR 469
Q+ VH DIKP NIL+D + +++DFG + + + S + A GT YI+PE+
Sbjct: 193 -QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV-AVGTPDYISPEILQA 250
Query: 470 RFGGVSH---KSDVYSYGMMIIEMV 491
GG + D +S G+ + EM+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 301 LGQGGYGEVYK-GELPDGQLVAVKVL---KNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG K DG+++ K L + + ++EV + H NIV +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 357 CYENKKNAL--IYELMPNGSLDKFIHNDRNIK--LEWKTMYQIAIGIARGLEYLHRGCQV 412
+ L + E G L I + L+ + + ++ + L+ HR
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 413 --RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
++H D+KP N+ LD K+ DFGLA+ S GT Y++PE +R
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF--VGTPYYMSPEQMNRM 191
Query: 471 FGGVSHKSDVYSYGMMIIEM 490
+ KSD++S G ++ E+
Sbjct: 192 --SYNEKSDIWSLGCLLYEL 209
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 139
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 140 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 191
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 192 -LNWMHYNQTVDIWSVGCIMAELL 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 301 LGQGGYGEVYK-GELPDGQLVAVKVL---KNSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG K DG+++ K L + + ++EV + H NIV +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 357 CYENKKNAL--IYELMPNGSLDKFIHNDRNIK--LEWKTMYQIAIGIARGLEYLHRGCQV 412
+ L + E G L I + L+ + + ++ + L+ HR
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 413 --RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRR 470
++H D+KP N+ LD K+ DFGLA+ S GT Y++PE +R
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF--VGTPYYMSPEQMNRM 191
Query: 471 FGGVSHKSDVYSYGMMIIEM 490
+ KSD++S G ++ E+
Sbjct: 192 --SYNEKSDIWSLGCLLYEL 209
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 39 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 97
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 151
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 152 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 210
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 211 KGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 31 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 143
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 202
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI++ L K L+ ELM
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 150 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 201
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 202 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 254
Query: 489 EMV 491
EMV
Sbjct: 255 EMV 257
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 147
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 199
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 200 -LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 138
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 190
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 191 -LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 141
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 142 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 193
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 194 -LNWMHYNQTVDIWSVGCIMAELL 216
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 29 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 141
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 200
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 201 KGYTKSIDIWSVGCILAEMLS 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 139
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 140 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 191
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 192 -LNWMHYNQTVDIWSVGCIMAELL 214
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 29 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 141
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 200
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 201 KGYTKSIDIWSVGCILAEMLS 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 148
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 200
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 201 -LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 165
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 166 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIM 217
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 218 -LNWMHYNQTVDIWSVGCIMAELL 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 140
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 141 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 192
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 193 -LNWMHYNQTVDIWSVGCIMAELL 215
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 149
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 201
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 202 -LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 144
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 196
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 197 -LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 301 LGQGGYGEVYKGELPDGQLVAVKVLKNSRCNGEEF----INEVASISRTSHVNIV----T 352
+G+G YG V + V V + K S + + + E+ + R H NI+
Sbjct: 51 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
E K+ I + + L K + + L + I RGL+Y+H
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA--- 163
Query: 413 RIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARGTIGYIAPEVYSRRF 471
++H D+KP N+LL+ KI DFGLA+ A L T Y APE+
Sbjct: 164 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS- 222
Query: 472 GGVSHKSDVYSYGMMIIEMVG 492
G + D++S G ++ EM+
Sbjct: 223 KGYTKSIDIWSVGCILAEMLS 243
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V ++ G +AVK L S + + E+ + H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 171
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 172 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 223
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 224 -LNWMHYNMTVDIWSVGCIMAELL 246
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 144
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 196
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 197 -LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 147
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 199
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 200 -LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 33/190 (17%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTS-HVNIVTFLGFCY 358
LG G G V ++G G+ VAVK + C+ + E+ ++ + H N++ + +C
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA--LMEIKLLTESDDHPNVIRY--YCS 77
Query: 359 ENKKNALIYEL-MPNGSLDKFIHN----DRNIKLEWKTMYQIAI--GIARGLEYLHRGCQ 411
E L L + N +L + + D N+KL+ K I++ IA G+ +LH
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ-KEYNPISLLRQIASGVAHLH---S 133
Query: 412 VRIVHFDIKPQNILLD-------------EDFCPKISDFGLAKQAQKKESAI--SMLHAR 456
++I+H D+KPQNIL+ E+ ISDFGL K+ +S+ ++ +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 457 GTIGYIAPEV 466
GT G+ APE+
Sbjct: 194 GTSGWRAPEL 203
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 144
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 196
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 197 -LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 351 VTFLGFCYENKKNALIYELM-PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E M P L FI ++ E + + LE +
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 130
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 186
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 187 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVS 232
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
+E + I WC+ PS+RP+ ++
Sbjct: 233 SECQHLIR--------WCLALRPSDRPTFEEI 256
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 154
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 206
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 207 -LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 154
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 206
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 207 -LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 154
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 206
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 207 -LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 148
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 200
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 201 -LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI++ L K L+ ELM
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 150 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 201
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 202 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 254
Query: 489 EMV 491
EMV
Sbjct: 255 EMV 257
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VA+K L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EMV
Sbjct: 217 EMV 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 57/219 (26%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG--------GVSHKSDVYS 482
KI DFGLA+ A GT + PEV +R + G D++S
Sbjct: 164 TLKILDFGLARTA-------------GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 483 YGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDF 521
G ++ EMV CH +++ PG D+
Sbjct: 211 VGCIMGEMV---------------CHKILF----PGRDY 230
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 148
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 200
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 201 -LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI++ L K L+ ELM
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 111 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 162
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 163 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 215
Query: 489 EMV 491
EMV
Sbjct: 216 EMV 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 153
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 154 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 205
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 206 -LNWMHYNQTVDIWSVGCIMAELL 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI++ L K L+ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EMV
Sbjct: 217 EMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI++ L K L+ ELM
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 113 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 164
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 165 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 217
Query: 489 EMV 491
EMV
Sbjct: 218 EMV 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI++ L K L+ ELM
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 113 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 164
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 165 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 217
Query: 489 EMV 491
EMV
Sbjct: 218 EMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VA+K L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 105 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 156
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 157 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 209
Query: 489 EMV 491
EMV
Sbjct: 210 EMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VA+K L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 106 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 157
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 158 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 210
Query: 489 EMV 491
EMV
Sbjct: 211 EMV 213
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 161
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 162 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 213
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 214 -LNWMHYNQTVDIWSVGCIMAELL 236
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 162
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 214
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 215 -LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ D++S G ++ E++
Sbjct: 195 LNAM-HYNQTVDIWSVGCIMAELL 217
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF------CYENKKNALIYELM 370
VA+K L ++ + + E+ + +H NI++ L E + L+ ELM
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 106 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 157
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 158 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 210
Query: 489 EMV 491
EMV
Sbjct: 211 EMV 213
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDA 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EM+
Sbjct: 217 EMI 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 165
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DFGLA+ + M T Y APE+
Sbjct: 166 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIM 217
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 218 -LNWMHYNQTVDIWSVGCIMAELL 240
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 318 QLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-D 376
+LVAVK ++ E E+ + H NIV F A++ E G L +
Sbjct: 45 ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 377 KFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP--KI 434
+ + R + E + +Q I G+ Y H +++ H D+K +N LLD P KI
Sbjct: 105 RICNAGRFSEDEARFFFQQLIS---GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKI 158
Query: 435 SDFGLAKQAQKKESAISMLHAR-----GTIGYIAPEVYSRR-FGGVSHKSDVYSYGMMII 488
FG +K S+LH++ GT YIAPEV ++ + G +DV+S G+ +
Sbjct: 159 CAFGYSKS--------SVLHSQPKSTVGTPAYIAPEVLLKKEYDG--KVADVWSCGVTLY 208
Query: 489 EMV 491
M+
Sbjct: 209 VML 211
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 318 QLVAVKVLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNALIYELMPNGSL-D 376
+LVAVK ++ E E+ + H NIV F A++ E G L +
Sbjct: 45 ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 377 KFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCP--KI 434
+ + R + E + +Q I G+ Y H +++ H D+K +N LLD P KI
Sbjct: 105 RICNAGRFSEDEARFFFQQLIS---GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKI 158
Query: 435 SDFGLAKQAQKKESAISMLHAR-----GTIGYIAPEVYSRR-FGGVSHKSDVYSYGMMII 488
FG +K S+LH++ GT YIAPEV ++ + G +DV+S G+ +
Sbjct: 159 CAFGYSKS--------SVLHSQPKDTVGTPAYIAPEVLLKKEYDG--KVADVWSCGVTLY 208
Query: 489 EMV 491
M+
Sbjct: 209 VML 211
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 57/219 (26%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG--------GVSHKSDVYS 482
KI DFGLA+ A GT + PEV +R + G D++S
Sbjct: 164 TLKILDFGLARTA-------------GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWS 210
Query: 483 YGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDF 521
G ++ EMV CH +++ PG D+
Sbjct: 211 VGCIMGEMV---------------CHKILF----PGRDY 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
E + + + L+ + ++ KL + + I RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KSQKLTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 412 VRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRF 471
I+H D+KP N+ ++ED KI DFGL + + M T Y APE+ +
Sbjct: 145 -DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIM-LNW 197
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
+ D++S G ++ E++
Sbjct: 198 MHYNQTVDIWSVGCIMAELL 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 399 IARGLEYLHRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISML-HARG 457
I RGL+Y+H ++H D+KP N+L++ KI DFGLA+ A + L
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 458 TIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIEMV 491
T Y APE+ G + D++S G ++ EM+
Sbjct: 210 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEML 242
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 45/213 (21%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 117 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 168
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 169 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDLWSVGCIMG 221
Query: 489 EMVGCTKNLDDEVTDTSICHNLIYERIEPGNDF 521
EMV CH +++ PG D+
Sbjct: 222 EMV---------------CHKILF----PGRDY 235
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 302 GQGGYGEVYKG-ELPDGQLVAVK-VLKNSRCNGEEFINEVASISRTSHVNIVTFLGFCY- 358
GQG +G V G E G VA+K V+++ R E + + ++ H NIV + Y
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 359 ---ENKKNA---LIYELMPNGSLDKFIHN--DRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
++++ ++ E +P+ +L + N R + + + R + LH
Sbjct: 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP- 148
Query: 411 QVRIVHFDIKPQNILLDE-DFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSR 469
V + H DIKP N+L++E D K+ DFG AK+ E ++ + +R Y APE+
Sbjct: 149 SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YYRAPELI-- 203
Query: 470 RFGGVSHKS--DVYSYGMMIIEMV 491
FG + + D++S G + EM+
Sbjct: 204 -FGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI D+GLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 45/213 (21%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 106 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 157
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 158 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDLWSVGCIMG 210
Query: 489 EMVGCTKNLDDEVTDTSICHNLIYERIEPGNDF 521
EMV CH +++ PG D+
Sbjct: 211 EMV---------------CHKILF----PGRDY 224
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDA 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EM+
Sbjct: 217 EMI 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 23/194 (11%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEFINEVA 340
PK+Y+ +D +++K LG G G+V + GQ A+K+L +S +E ++
Sbjct: 2 PKKYAVTDDYQLSKQV---LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQE-VDHHW 57
Query: 341 SISRTSHVNIVTFLGFCYENKKNA-----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQI 395
S H IV L YEN + +I E M G L I + + +I
Sbjct: 58 QASGGPH--IVCILD-VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEI 114
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISM 452
I +++LH I H D+KP+N+L ++D K++DFG AK+ + ++
Sbjct: 115 MRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN----AL 167
Query: 453 LHARGTIGYIAPEV 466
T Y+APEV
Sbjct: 168 QTPCYTPYYVAPEV 181
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 23/194 (11%)
Query: 282 PKRYSYSDVKRMTKSFRDKLGQGGYGEVYK-GELPDGQLVAVKVLKNSRCNGEEFINEVA 340
PK+Y+ +D +++K LG G G+V + GQ A+K+L +S +E ++
Sbjct: 21 PKKYAVTDDYQLSKQV---LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQE-VDHHW 76
Query: 341 SISRTSHVNIVTFLGFCYENKKNA-----LIYELMPNGSLDKFIHNDRNIKLEWKTMYQI 395
S H IV L YEN + +I E M G L I + + +I
Sbjct: 77 QASGGPH--IVCILD-VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEI 133
Query: 396 AIGIARGLEYLHRGCQVRIVHFDIKPQNILL---DEDFCPKISDFGLAKQAQKKESAISM 452
I +++LH I H D+KP+N+L ++D K++DFG AK+ + ++
Sbjct: 134 MRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN----AL 186
Query: 453 LHARGTIGYIAPEV 466
T Y+APEV
Sbjct: 187 QTPCYTPYYVAPEV 200
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 299 DKLGQGGYGEVYKGELPDGQLVAVKVLKNSRC-------NGEEFIN-EVASISRTSHVNI 350
D LG+G YG+V E+ D + + + +K + NGE + E+ + R H N+
Sbjct: 11 DLLGEGSYGKVK--EVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 351 VTFLGFCY--ENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHR 408
+ + Y E +K ++ E G + + + + + + + GLEYLH
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH- 126
Query: 409 GCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYS 468
IVH DIKP N+LL KIS G+A+ + + ++G+ + PE+ +
Sbjct: 127 --SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN 184
Query: 469 RRFGGVSHKSDVYSYGMMI 487
K D++S G+ +
Sbjct: 185 GLDTFSGFKVDIWSAGVTL 203
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 38/218 (17%)
Query: 299 DKLGQGGYGEVYK--GELPDGQLVAVKVLKNSRCNGEEFINEVASISR------TSHVNI 350
D LG+G +G+V + G+ VAVK++KN E +E+ + S
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRC 79
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
V L + + +++EL+ + D FI + + + ++A I + + +LH
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYD-FIKENGFLPFRLDHIRKMAYQICKSVNFLHSN- 137
Query: 411 QVRIVHFDIKPQNILL-----DEDFCPKIS--------------DFGLAKQAQKKESAIS 451
++ H D+KP+NIL E + PKI DFG A + S +
Sbjct: 138 --KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLV 195
Query: 452 MLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMIIE 489
Y APEV G S DV+S G ++IE
Sbjct: 196 XXR-----HYRAPEVILAL--GWSQPCDVWSIGCILIE 226
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 24/183 (13%)
Query: 298 RDKLGQGGYGE-VYKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTS--HVNIVTFL 354
+D LG G G VY+G + D + VAVK + C F + + R S H N++ +
Sbjct: 29 KDVLGHGAEGTIVYRG-MFDNRDVAVKRIL-PECFS--FADREVQLLRESDEHPNVIRY- 83
Query: 355 GFCYE-NKKNALIYELMPNGSLDKFIHND--RNIKLEWKTMYQIAIGIARGLEYLHRGCQ 411
FC E +++ I + +L +++ ++ LE T+ Q GL +LH
Sbjct: 84 -FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ---QTTSGLAHLH---S 136
Query: 412 VRIVHFDIKPQNILLDE-----DFCPKISDFGLAKQ-AQKKESAISMLHARGTIGYIAPE 465
+ IVH D+KP NIL+ ISDFGL K+ A + S GT G+IAPE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 466 VYS 468
+ S
Sbjct: 197 MLS 199
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 46/215 (21%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTS-HVNIVTFLGFCY 358
LG G G V ++G G+ VAVK + C+ + E+ ++ + H N++ + +C
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA--LMEIKLLTESDDHPNVIRY--YCS 95
Query: 359 ENKKNALIYEL-MPNGSLDKFIHN----DRNIKLEWK-----TMYQIAIGIARGLEYLHR 408
E L L + N +L + + D N+KL+ + + QIA G+A +LH
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA----HLH- 150
Query: 409 GCQVRIVHFDIKPQNILLD-------------EDFCPKISDFGLAKQAQKKESAI--SML 453
++I+H D+KPQNIL+ E+ ISDFGL K+ + ++
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 454 HARGTIGYIAPEVY----SRRFGGVSHKSDVYSYG 484
+ GT G+ APE+ RR ++ D++S G
Sbjct: 209 NPSGTSGWRAPELLEESTKRR---LTRSIDIFSMG 240
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 46/215 (21%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTS-HVNIVTFLGFCY 358
LG G G V ++G G+ VAVK + C+ + E+ ++ + H N++ + +C
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA--LMEIKLLTESDDHPNVIRY--YCS 95
Query: 359 ENKKNALIYEL-MPNGSLDKFIHN----DRNIKLEWK-----TMYQIAIGIARGLEYLHR 408
E L L + N +L + + D N+KL+ + + QIA G+A +LH
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA----HLH- 150
Query: 409 GCQVRIVHFDIKPQNILLD-------------EDFCPKISDFGLAKQAQKKESAI--SML 453
++I+H D+KPQNIL+ E+ ISDFGL K+ + ++
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 454 HARGTIGYIAPEVY----SRRFGGVSHKSDVYSYG 484
+ GT G+ APE+ RR ++ D++S G
Sbjct: 209 NPSGTSGWRAPELLEESTKRR---LTRSIDIFSMG 240
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 300 KLGQGGYGEVYKGEL-PDGQLVAVKVLKNSRCNGEE---FINEVASISRTSHVN-IVTFL 354
++G G G+V+K G ++AVK ++ S N EE + ++ + ++ IV
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 355 GFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRI 414
G N + ELM G+ + + + + + ++ + I + L YL + +
Sbjct: 91 GTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE--KHGV 146
Query: 415 VHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY---SRRF 471
+H D+KP NILLDE K+ DFG++ + ++ + G Y+APE
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGCAAYMAPERIDPPDPTK 203
Query: 472 GGVSHKSDVYSYGMMIIEMV 491
++DV+S G+ ++E+
Sbjct: 204 PDYDIRADVWSLGISLVELA 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EM+
Sbjct: 217 EMI 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 38/189 (20%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG--------GVSHKSDVYS 482
KI DFGLA+ A GT + PEV +R + G D++S
Sbjct: 164 TLKILDFGLARTA-------------GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 483 YGMMIIEMV 491
G ++ EM+
Sbjct: 211 VGCIMGEMI 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 114 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 165
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFG-GVSHKSDVYSYGMMIIE 489
KI DFGLA+ A ++ M+ T Y APEV G G D++S G ++ E
Sbjct: 166 TLKILDFGLARTAG---TSFMMVPFVVTRYYRAPEVI---LGMGYKENVDIWSVGCIMGE 219
Query: 490 MV 491
M+
Sbjct: 220 MI 221
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 176
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 177 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 230
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 231 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSS 276
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 277 ECQHLIR--------WCLALRPSDRPTFEEI 299
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 159
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 215
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 216 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIGGQVFFRQRVS 261
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
+E + I WC+ PS+RP+ ++
Sbjct: 262 SECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 161
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 162 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 215
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 216 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSS 261
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 262 ECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 161
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 162 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 215
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 216 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIGGQVFFRQRVSS 261
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 262 ECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 146
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 202
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 203 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVS 248
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
+E + I WC+ PS+RP+ ++
Sbjct: 249 SECQHLIR--------WCLALRPSDRPTFEEI 272
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 148
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 149 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 202
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 203 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSS 248
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 249 ECQHLIR--------WCLALRPSDRPTFEEI 271
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 62/283 (21%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRCNGEEFIN-------EVASISRTS----HV 348
LG+GG+G V+ G L D VA+KV+ +R G ++ EVA + + H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 349 NIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLH- 407
++ L + +E ++ ++ P + D F + L + +++ H
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 408 RGCQVRIVHFDIKPQNILLD-EDFCPKISDFGLAKQAQKKESAISMLHAR------GTIG 460
RG +VH DIK +NIL+D C K+ DFG + ++LH GT
Sbjct: 158 RG----VVHRDIKDENILIDLRRGCAKLIDFG----------SGALLHDEPYTDFDGTRV 203
Query: 461 YIAPEVYSR-RFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEP-- 517
Y PE SR ++ + + V+S G+++ +MV C ++ +ER +
Sbjct: 204 YSPPEWISRHQYHALP--ATVWSLGILLYDMV---------------CGDIPFERDQEIL 246
Query: 518 GNDFQFDGVATEEEKKIAKMMILVGFWCIQTNPSERPSMHKVL 560
+ F + + + + C+ PS RPS+ ++L
Sbjct: 247 EAELHFPAHVSPDCCALIRR-------CLAPKPSSRPSLEEIL 282
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 158
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 214
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 215 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIGGQVFFRQRVS 260
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
+E + I WC+ PS+RP+ ++
Sbjct: 261 SECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 162
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 163 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 216
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 217 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIGGQVFFRQRVSS 262
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 263 ECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 129
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 130 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 183
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 184 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSS 229
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 230 ECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 33/190 (17%)
Query: 301 LGQGGYGEV-YKGELPDGQLVAVKVLKNSRCNGEEFINEVASISRTS-HVNIVTFLGFCY 358
LG G G V ++G G+ VAVK + C+ + E+ ++ + H N++ + +C
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA--LMEIKLLTESDDHPNVIRY--YCS 77
Query: 359 ENKKNALIYEL-MPNGSLDKFIHN----DRNIKLEWKTMYQIAI--GIARGLEYLHRGCQ 411
E L L + N +L + + D N+KL+ K I++ IA G+ +LH
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ-KEYNPISLLRQIASGVAHLH---S 133
Query: 412 VRIVHFDIKPQNILLD-------------EDFCPKISDFGLAKQAQKKESAI--SMLHAR 456
++I+H D+KPQNIL+ E+ ISDFGL K+ + ++ +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 193
Query: 457 GTIGYIAPEV 466
GT G+ APE+
Sbjct: 194 GTSGWRAPEL 203
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLV---AVKVLKNSRCNGEEFINEVASISRTSHVNIVT 352
+ + +G+G +GEV K + G + A K+ K + + F E+ + H NI+
Sbjct: 12 TLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+N L+ EL G L + + + R + +I + + Y H+ +
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--ESDAARIMKDVLSAVAYCHK---L 125
Query: 413 RIVHFDIKPQNILL--DEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSR 469
+ H D+KP+N L D P K+ DFGLA + + + M GT Y++P+V
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEG 182
Query: 470 RFGGVSHKSDVYSYGMMI 487
+G + D +S G+M+
Sbjct: 183 LYGP---ECDEWSAGVMM 197
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI DF LA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 293 MTKSFR--DKLGQGGYGEVYKGE-LPDGQLVAVKVLKNSRCNGEEFINEV---ASISRTS 346
M +FR K+G G +GE+ G+ L + VA+K L+ + + E +S T
Sbjct: 2 MGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPIKSRAPQLHLEYRFYKQLSATE 60
Query: 347 HVNIVTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYL 406
V V + G K NA++ EL+ D F DR L KT+ IAI + +EY+
Sbjct: 61 GVPQVYYFG--PXGKYNAMVLELLGPSLEDLFDLCDRTFTL--KTVLMIAIQLITRMEYV 116
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPK-----ISDFGLAKQAQKKES 448
H +++ D+KP+N L+ + I DFGLAK+ E+
Sbjct: 117 HTKS---LIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPET 160
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 165
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 221
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 222 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVS 267
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
+E + I WC+ PS+RP+ ++
Sbjct: 268 SECQHLIR--------WCLALRPSDRPTFEEI 291
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 133
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 134 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 187
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 188 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSS 233
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 234 ECQHLIR--------WCLALRPSDRPTFEEI 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 131
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 187
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 188 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVS 233
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
+E + I WC+ PS+RP+ ++
Sbjct: 234 SECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 296 SFRDKLGQGGYGEVYKGELPDGQLV---AVKVLKNSRCNGEEFINEVASISRTSHVNIVT 352
+ + +G+G +GEV K + G + A K+ K + + F E+ + H NI+
Sbjct: 29 TLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 353 FLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQV 412
+N L+ EL G L + + + R + +I + + Y H+ +
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--ESDAARIMKDVLSAVAYCHK---L 142
Query: 413 RIVHFDIKPQNILL--DEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSR 469
+ H D+KP+N L D P K+ DFGLA + + + M GT Y++P+V
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEG 199
Query: 470 RFGGVSHKSDVYSYGMMI 487
+G + D +S G+M+
Sbjct: 200 LYGP---ECDEWSAGVMM 214
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 126
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 182
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 183 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIGGQVFFRQRVS 228
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
+E + I WC+ PS+RP+ ++
Sbjct: 229 SECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 161
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 162 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 215
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 216 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIGGQVFFRQRVSX 261
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 262 ECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 162
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 163 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 216
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 217 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIGGQVFFRQRVSX 262
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 263 ECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 134
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 135 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 188
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 189 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSS 234
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 235 ECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 132
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 133 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 186
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 187 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSS 232
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 233 ECQHLIR--------WCLALRPSDRPTFEEI 255
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 134
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 135 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 188
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V++
Sbjct: 189 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSS 234
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 235 ECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 111/272 (40%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 159
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 215
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 216 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIGGQVFFRQRVS 261
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 262 XECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI FGLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 113 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 164
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 165 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 217
Query: 489 EMV 491
EM+
Sbjct: 218 EMI 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 148
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 149 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 202
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 203 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSX 248
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 249 ECQHLIR--------WCLALRPSDRPTFEEI 271
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 176
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 177 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 230
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 231 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSX 276
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 277 ECQHLIR--------WCLALRPSDRPTFEEI 299
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EM+
Sbjct: 217 EMI 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 351 VTFLGFCYENKKNALIYELMPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGC 410
+ L + LI E P D F L+ + + + + H C
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 181
Query: 411 QVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VYS 468
V +H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 182 GV--LHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIRY 235
Query: 469 RRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVAT 528
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 236 HRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVSX 281
Query: 529 EEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 282 ECQHLIR--------WCLALRPSDRPTFEEI 304
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 111/272 (40%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTSH--VNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 146
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 202
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV D H+ E I G F V+
Sbjct: 203 YHRYHGRS--AAVWSLGILLYDMV---------CGDIPFEHD---EEIIRGQVFFRQRVS 248
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 249 XECQHLIR--------WCLALRPSDRPTFEEI 272
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 320 VAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGFCYENKKNA------LIYELM 370
VA+K L ++ + + E+ + +H NI+ L K ++ ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 371 PNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILLDEDF 430
+ +L + I + + + +YQ+ GI ++LH I+H D+KP NI++ D
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 431 CPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVYSRRFGGVSHKS--DVYSYGMMII 488
KI DFGLA+ A ++ M T Y APEV G+ +K D++S G ++
Sbjct: 164 TLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMG 216
Query: 489 EMV 491
EM+
Sbjct: 217 EMI 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI D GLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLKNSRC-------NGEEFINEVASISRTS--HVNI 350
LG GG+G VY G + D VA+K ++ R NG EV + + S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 351 VTFLGFCYENKKNALIYEL-MPNGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRG 409
+ L + LI E P L FI ++ E + + LE +
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-----LEAVRHC 126
Query: 410 CQVRIVHFDIKPQNILLDEDFCP-KISDFGLAKQAQKKESAISMLHARGTIGYIAPE-VY 467
++H DIK +NIL+D + K+ DFG A K++ + GT Y PE +
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD--GTRVYSPPEWIR 182
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMVGCTKNLDDEVTDTSICHNLIYERIEPGNDFQFDGVA 527
R+ G S + V+S G+++ +MV C D H+ E I G F V+
Sbjct: 183 YHRYHGRS--AAVWSLGILLYDMV-CG--------DIPFEHD---EEIIRGQVFFRQRVS 228
Query: 528 TEEEKKIAKMMILVGFWCIQTNPSERPSMHKV 559
E + I WC+ PS+RP+ ++
Sbjct: 229 XECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 372 NGSLDKFIHNDRNIKLEWKTMYQIAIGIARGLEYLHRGCQVRIVHFDIKPQNILL--DED 429
NGS+ F + ++ E K + I I L YLH I H DIKP+N L ++
Sbjct: 151 NGSIHGFRESLDFVQRE-KLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKS 206
Query: 430 FCPKISDFGLAKQAQKKESA--ISMLHARGTIGYIAPEVYSRRFGGVSHKSDVYSYGMMI 487
F K+ DFGL+K+ K + M GT ++APEV + K D +S G+++
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 301 LGQGGYGEVYKG-ELPDGQLVAVKVLK---NSRCNGEEFINEVASISRTSHVNIVTFLGF 356
+G G YG V + G VAVK L S + + E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 357 -----CYENKKNALIYELMPNGSLDKFIH----NDRNIKLEWKTMYQIAIGIARGLEYLH 407
E + + + L+ + D +++ +YQI RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---LIYQIL----RGLKYIH 142
Query: 408 RGCQVRIVHFDIKPQNILLDEDFCPKISDFGLAKQAQKKESAISMLHARGTIGYIAPEVY 467
I+H D+KP N+ ++ED KI D GLA+ + M T Y APE+
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIM 194
Query: 468 SRRFGGVSHKSDVYSYGMMIIEMV 491
+ + D++S G ++ E++
Sbjct: 195 -LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 298 RDKLGQGGYGEVYKGE-LPDGQLVAVK-VLKNSRCNGEEFINEVASISRTS-HVNIVTFL 354
R L +GG+ VY+ + + G+ A+K +L N I EV + + S H NIV F
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 355 GFCYENKKNA-------LIYELMPNGSLDKFIHN-DRNIKLEWKTMYQIAIGIARGLEYL 406
K+ + L+ + G L +F+ + L T+ +I R ++++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 407 HRGCQVRIVHFDIKPQNILLDEDFCPKISDFGLA 440
HR + I+H D+K +N+LL K+ DFG A
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,226,742
Number of Sequences: 62578
Number of extensions: 794013
Number of successful extensions: 4113
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 306
Number of HSP's that attempted gapping in prelim test: 1992
Number of HSP's gapped (non-prelim): 1144
length of query: 582
length of database: 14,973,337
effective HSP length: 104
effective length of query: 478
effective length of database: 8,465,225
effective search space: 4046377550
effective search space used: 4046377550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)