BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040608
MGQCQEHKTRPQSQVEIQERGEIFFFYRPKVGKEEAHSSDDVQRLYLVLRPESGERSVEQ
KQDPESGKEGAKKEESDSVKHGSGSSEGGHGSKLVNIEKELLLRFIVMGRKSLPDPREKS
RPYWGFVEMVTTKVEDVKVALAGEEYDTSTRGHRRNLPARAVGEGVYRILRHSPGKKMHT
HLIYKLEFPPEDMENETQESLNIEHEGSFLIQIKKPDQHGTSQFRGLQNKRKAVFPAHLQ
GQFGQKRYCPADPPDFLNYEGCEFLLISASDDIEEELGLELKTDEGEADESCSDLIKTFG
ETASTSALLRGTWV

High Scoring Gene Products

Symbol, full name Information P value
AT1G16770 protein from Arabidopsis thaliana 1.1e-103

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040608
        (314 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2015641 - symbol:AT1G16770 "AT1G16770" species...  1027  1.1e-103  1
ASPGD|ASPL0000036574 - symbol:AN3024 species:162425 "Emer...   190  9.1e-20   2


>TAIR|locus:2015641 [details] [associations]
            symbol:AT1G16770 "AT1G16770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC026237 EMBL:AY924672 EMBL:DQ132651
            IPI:IPI00541779 RefSeq:NP_173121.1 UniGene:At.51638 PRIDE:Q9FWR1
            EnsemblPlants:AT1G16770.1 GeneID:838248 KEGG:ath:AT1G16770
            TAIR:At1g16770 HOGENOM:HOG000006214 InParanoid:Q9FWR1 OMA:LNYEGCE
            PhylomeDB:Q9FWR1 ProtClustDB:CLSN2679831 Genevestigator:Q9FWR1
            Uniprot:Q9FWR1
        Length = 324

 Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
 Identities = 208/324 (64%), Positives = 234/324 (72%)

Query:     1 MGQCQEHKTRPQSQVEIQERGEIFFFYRPKVGKEEAHSSDDVQRLYLVLRPESGERSVEQ 60
             MGQ +E KTRP  QVEIQERGEIFFFYRPKV KEEAHS DDVQRLY+V+RPESGE   E+
Sbjct:     1 MGQGKEVKTRPDPQVEIQERGEIFFFYRPKVNKEEAHSVDDVQRLYIVMRPESGENPTEE 60

Query:    61 KQDPXXXXXXXXXXXXDXXXXXXXXXXXXXXXX-----LVNIEKELLLRFIVMGRKSLPD 115
             KQDP            D                      VNIEK+LLLRFIVMG+KSLPD
Sbjct:    61 KQDPLSGKEGSDKDSGDGEASGSSSGAKNQGEGGHGVEKVNIEKQLLLRFIVMGKKSLPD 120

Query:   116 PREKSRPYWGFVEMVTTKVEDVKVALAGEEYDTSTRGHRRNLPARAVGEGVYRILRHSPG 175
             P +KS+P+WGFVEMVTT VEDVK AL GEEY+T TRGHR   PARAVGEG+YRILRH P 
Sbjct:   121 PSKKSQPFWGFVEMVTTNVEDVKNALKGEEYETKTRGHRHKPPARAVGEGIYRILRHKPN 180

Query:   176 --KKMHTHLIYKLEFPP--EDMENETQESLNIEHEGSFLIQIKKPDQHG--TSQFRGLQN 229
               +K HTHL+YKLEFP   +  E+E QESLNIE EGSFLIQI+ P+Q G   S F GLQ 
Sbjct:   181 PTRKHHTHLVYKLEFPSVSQTREHEPQESLNIEPEGSFLIQIRNPEQGGGGRSGFGGLQR 240

Query:   230 KRKAVFPAHLQGQFGQKRYCPADPPDFLNYEGCEFLLISASDDIEEELGLELKTDEGEAD 289
             KRKA FP H+Q   G  R+ PADPPDFLNYEGCE LLISASDDIEEELG+EL+  EG+ +
Sbjct:   241 KRKAQFPVHIQAHLGHTRFGPADPPDFLNYEGCELLLISASDDIEEELGMELEP-EGDGE 299

Query:   290 ESCSDLIKTFGETASTSALLRGTW 313
             ES  DL+KTFG+    + LLRGTW
Sbjct:   300 ESTCDLLKTFGDDVEATPLLRGTW 323


>ASPGD|ASPL0000036574 [details] [associations]
            symbol:AN3024 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] EMBL:BN001306 EnsemblFungi:CADANIAT00010055
            HOGENOM:HOG000195954 OMA:PKVPTTW Uniprot:C8VIU9
        Length = 433

 Score = 190 (71.9 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
 Identities = 57/186 (30%), Positives = 91/186 (48%)

Query:   104 RFIVMGRKSLPDPREKSRPYWGFVEMVTTKVEDVKVA-LAGEEYDTSTRGHRRNLPARAV 162
             R +++ +K  P    K R   GFVE     V+ ++   +AG+ Y+TSTRG R    A+  
Sbjct:   212 RLMMLPKKRFPRSG-KDREM-GFVEKAGASVKQLQEDFIAGDTYETSTRGTREIPEAKPY 269

Query:   163 GEGVYRILRHSPGKKMHTHLIYKLEFPPEDMENETQESLNIEHEGSFLIQIKKPDQHGTS 222
              EGVY +       K  TH++Y +  P  +   E QE   +   GS+L+Q K P      
Sbjct:   270 AEGVYAMT----STKRATHIVYHITLP--ERLGEIQEDFGLSERGSWLVQSKNPKFPSPP 323

Query:   223 QFRGLQNKRKAVFPAHLQGQFGQKRYCPADPPDFLNYEGCEFLLI-SASDDIEEELGLEL 281
               R     ++  +P  +  +FG+ R+ PA P + L+Y   +FL++ SA+ D    LG   
Sbjct:   324 SAR---LPKEPEYPESILEEFGELRWIPARP-ELLDYPNAQFLMVGSAAGD----LGKAA 375

Query:   282 KTDEGE 287
               +EG+
Sbjct:   376 TAEEGD 381

 Score = 100 (40.3 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
 Identities = 20/46 (43%), Positives = 29/46 (63%)

Query:    17 IQERGEIFFFYRPKVGKEEAHSSDDVQRLYLVLRPESGERSVEQKQ 62
             I E+G I+FFYR +V  EEAH   DV R + +LRP     S++ ++
Sbjct:   157 ILEKGIIYFFYRGRVNVEEAHGVQDVARSFFILRPTPMGASMDSER 202


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      314       286   0.00086  115 3  11 22  0.42    34
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  204 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.18u 0.12s 23.30t   Elapsed:  00:00:01
  Total cpu time:  23.18u 0.12s 23.30t   Elapsed:  00:00:01
  Start:  Sat May 11 03:13:38 2013   End:  Sat May 11 03:13:39 2013

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