Query 040611
Match_columns 434
No_of_seqs 448 out of 2867
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 16:11:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040611.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040611hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 5.1E-38 1.8E-42 290.1 20.5 209 9-236 33-241 (253)
2 1oy3_D Transcription factor in 100.0 9.2E-38 3.2E-42 292.2 19.4 216 26-258 2-267 (282)
3 3aji_A 26S proteasome non-ATPa 100.0 1.3E-37 4.4E-42 282.9 19.2 214 3-236 10-223 (231)
4 3utm_A Tankyrase-1; tankyrase, 100.0 2E-37 6.8E-42 298.8 21.5 244 3-267 28-330 (351)
5 2xai_A ASB-9, ankyrin repeat a 100.0 1.4E-37 4.7E-42 288.7 18.7 232 3-257 7-246 (261)
6 2f8y_A Notch homolog 1, transl 100.0 2.8E-37 9.5E-42 279.1 18.0 208 10-236 2-209 (223)
7 3d9h_A CDNA FLJ77766, highly s 100.0 1.3E-36 4.6E-41 285.8 22.0 232 4-257 20-263 (285)
8 1wdy_A 2-5A-dependent ribonucl 100.0 2.4E-36 8.2E-41 282.5 23.6 236 3-257 9-261 (285)
9 2dzn_A Probable 26S proteasome 100.0 1.5E-36 5.1E-41 275.2 21.2 218 33-267 2-226 (228)
10 2dzn_A Probable 26S proteasome 100.0 9.5E-37 3.2E-41 276.5 19.5 214 3-232 6-222 (228)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 4.6E-37 1.6E-41 283.8 17.5 225 26-269 3-246 (253)
12 4b93_B Ankyrin repeat domain-c 100.0 1.6E-37 5.3E-42 289.5 14.3 208 3-230 15-230 (269)
13 1k1a_A B-cell lymphoma 3-encod 100.0 4E-36 1.4E-40 274.6 23.2 214 26-259 2-226 (241)
14 1k1a_A B-cell lymphoma 3-encod 100.0 1.4E-36 4.7E-41 277.7 18.3 214 3-236 13-234 (241)
15 3b7b_A Euchromatic histone-lys 100.0 3.2E-36 1.1E-40 274.8 20.3 211 26-256 4-217 (237)
16 3b7b_A Euchromatic histone-lys 100.0 1.1E-35 3.9E-40 271.1 22.8 211 3-233 15-225 (237)
17 4g8k_A 2-5A-dependent ribonucl 100.0 6.5E-36 2.2E-40 287.7 22.1 241 3-245 29-302 (337)
18 2xai_A ASB-9, ankyrin repeat a 100.0 8.8E-36 3E-40 276.5 21.1 204 32-257 2-207 (261)
19 1oy3_D Transcription factor in 100.0 3.9E-36 1.3E-40 281.1 18.9 209 3-230 13-270 (282)
20 1n11_A Ankyrin; clathrin, BAND 100.0 1.3E-35 4.4E-40 295.8 21.7 249 4-257 118-385 (437)
21 1wdy_A 2-5A-dependent ribonucl 100.0 3.1E-35 1.1E-39 274.9 22.5 223 4-246 44-283 (285)
22 3aji_A 26S proteasome non-ATPa 100.0 7.3E-35 2.5E-39 264.7 22.3 220 30-268 3-227 (231)
23 3d9h_A CDNA FLJ77766, highly s 100.0 2.8E-35 9.7E-40 276.7 19.4 209 3-236 63-271 (285)
24 3ljn_A Hypothetical protein; a 100.0 1.2E-35 4.1E-40 288.9 16.9 212 3-236 24-262 (364)
25 1n11_A Ankyrin; clathrin, BAND 100.0 6.6E-35 2.3E-39 290.6 22.3 231 4-255 19-251 (437)
26 4b93_B Ankyrin repeat domain-c 100.0 1.8E-35 6E-40 275.6 15.0 219 27-257 5-226 (269)
27 2rfa_A Transient receptor pote 100.0 1.1E-34 3.9E-39 263.7 19.8 187 32-236 2-215 (232)
28 3eu9_A Huntingtin-interacting 100.0 2.1E-34 7.3E-39 262.5 20.6 214 3-236 13-228 (240)
29 1s70_B 130 kDa myosin-binding 100.0 7.6E-35 2.6E-39 275.1 17.7 233 6-257 5-273 (299)
30 3kea_A K1L; tropism, ANK repea 100.0 7.7E-35 2.6E-39 273.7 17.3 213 8-247 9-226 (285)
31 1ikn_D Protein (I-kappa-B-alph 100.0 2E-35 6.7E-40 269.7 9.6 212 28-255 3-225 (236)
32 2fo1_E LIN-12 protein; beta-ba 100.0 1.3E-34 4.3E-39 282.8 15.5 212 5-236 131-364 (373)
33 3ljn_A Hypothetical protein; a 100.0 1.2E-34 4E-39 282.0 14.1 211 26-257 13-252 (364)
34 3utm_A Tankyrase-1; tankyrase, 100.0 2.8E-33 9.6E-38 269.8 21.7 204 4-227 63-322 (351)
35 1s70_B 130 kDa myosin-binding 100.0 4.8E-34 1.6E-38 269.6 15.5 205 3-228 44-275 (299)
36 4gpm_A Engineered protein OR26 100.0 5.2E-33 1.8E-37 240.2 20.3 158 35-211 6-163 (169)
37 3hra_A Ankyrin repeat family p 100.0 6.1E-33 2.1E-37 246.4 20.4 188 30-236 2-196 (201)
38 3eu9_A Huntingtin-interacting 100.0 3.4E-33 1.2E-37 254.5 18.9 223 26-267 2-231 (240)
39 3hra_A Ankyrin repeat family p 100.0 7.9E-33 2.7E-37 245.7 20.7 186 3-207 9-201 (201)
40 2fo1_E LIN-12 protein; beta-ba 100.0 5.4E-34 1.9E-38 278.3 14.3 213 26-257 117-354 (373)
41 2etb_A Transient receptor pote 100.0 1.7E-33 5.7E-38 260.1 14.6 191 32-236 1-239 (256)
42 2pnn_A Transient receptor pote 100.0 4.4E-34 1.5E-38 266.7 10.5 201 26-236 6-251 (273)
43 2rfa_A Transient receptor pote 100.0 1.3E-32 4.4E-37 250.1 19.1 195 3-210 7-223 (232)
44 4g8k_A 2-5A-dependent ribonucl 100.0 2.7E-32 9.3E-37 262.4 21.3 227 4-244 64-329 (337)
45 1ikn_D Protein (I-kappa-B-alph 100.0 5.5E-34 1.9E-38 260.1 8.0 208 3-228 12-229 (236)
46 2f8y_A Notch homolog 1, transl 100.0 1.5E-31 5E-36 241.5 21.1 189 3-210 29-217 (223)
47 3kea_A K1L; tropism, ANK repea 100.0 1.1E-32 3.9E-37 258.9 14.3 203 3-236 35-239 (285)
48 1sw6_A Regulatory protein SWI6 100.0 6.4E-33 2.2E-37 265.8 11.1 195 7-229 105-327 (327)
49 2pnn_A Transient receptor pote 100.0 2E-32 6.9E-37 255.3 13.6 209 3-223 17-272 (273)
50 3jxi_A Vanilloid receptor-rela 100.0 2.7E-32 9.4E-37 252.4 12.7 193 30-236 2-243 (260)
51 2rfm_A Putative ankyrin repeat 100.0 2.6E-31 9E-36 234.5 17.7 165 24-207 26-190 (192)
52 4gpm_A Engineered protein OR26 100.0 3.5E-31 1.2E-35 228.7 17.5 156 84-243 6-163 (169)
53 2etb_A Transient receptor pote 100.0 9.6E-32 3.3E-36 248.3 14.1 199 3-210 6-247 (256)
54 3v30_A DNA-binding protein rfx 100.0 1E-30 3.5E-35 226.4 17.3 170 33-221 2-171 (172)
55 3jxi_A Vanilloid receptor-rela 100.0 9.6E-32 3.3E-36 248.8 11.2 200 3-211 9-252 (260)
56 3v31_A Ankyrin repeat family A 100.0 3.1E-30 1.1E-34 222.2 18.3 160 32-210 2-161 (167)
57 2vge_A RELA-associated inhibit 100.0 1.4E-32 4.9E-37 249.8 3.5 200 15-236 1-206 (229)
58 2y1l_E Darpin-8.4; hydrolase-i 100.0 8.1E-30 2.8E-34 220.3 19.4 162 27-207 8-169 (169)
59 4hbd_A KN motif and ankyrin re 100.0 1.5E-30 5.2E-35 243.3 15.7 186 33-235 76-267 (276)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 4E-30 1.4E-34 220.2 16.7 159 31-209 3-162 (162)
61 4hbd_A KN motif and ankyrin re 100.0 6.9E-31 2.4E-35 245.6 12.2 153 35-206 113-272 (276)
62 1awc_B Protein (GA binding pro 100.0 2.8E-29 9.6E-34 213.1 18.5 151 33-203 2-152 (153)
63 2rfm_A Putative ankyrin repeat 100.0 1.5E-29 5.3E-34 223.1 16.3 161 72-236 25-185 (192)
64 1sw6_A Regulatory protein SWI6 100.0 1.1E-30 3.8E-35 250.3 8.2 226 6-256 54-323 (327)
65 3twr_A Tankyrase-2; ankyrin re 100.0 2.3E-29 7.8E-34 216.3 14.5 161 29-208 4-164 (165)
66 3v30_A DNA-binding protein rfx 100.0 7.6E-29 2.6E-33 214.6 16.8 167 2-187 5-171 (172)
67 3f6q_A Integrin-linked protein 100.0 6.9E-29 2.4E-33 216.4 15.4 164 31-212 3-166 (179)
68 3v31_A Ankyrin repeat family A 100.0 1.3E-28 4.4E-33 212.1 16.1 152 81-236 2-153 (167)
69 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.5E-28 8.4E-33 207.8 17.6 155 32-206 1-155 (156)
70 1awc_B Protein (GA binding pro 100.0 1.4E-28 4.8E-33 208.8 15.5 150 82-236 2-151 (153)
71 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.2E-30 2.8E-34 233.1 7.9 182 30-231 2-194 (239)
72 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.1E-28 3.7E-33 211.3 13.2 152 81-236 4-155 (162)
73 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.4E-28 1.5E-32 209.3 16.1 155 78-236 10-164 (169)
74 3twr_A Tankyrase-2; ankyrin re 100.0 1.7E-28 5.9E-33 210.8 12.3 156 77-236 3-158 (165)
75 3f6q_A Integrin-linked protein 100.0 3.2E-28 1.1E-32 212.2 13.3 167 80-249 3-171 (179)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.2E-27 4E-32 203.5 14.2 150 82-236 2-151 (156)
77 2vge_A RELA-associated inhibit 99.9 1.3E-28 4.3E-33 223.7 8.5 191 49-256 1-195 (229)
78 3t8k_A Uncharacterized protein 99.9 9.8E-27 3.3E-31 204.1 10.0 156 33-208 6-178 (186)
79 1bi7_B P16INK4A, MTS1, multipl 99.9 2.5E-26 8.5E-31 195.6 11.6 141 29-189 8-149 (156)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 2.9E-26 9.9E-31 195.2 11.1 145 76-225 6-151 (156)
81 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7.8E-27 2.7E-31 213.3 8.0 162 80-246 3-169 (239)
82 1d9s_A Cyclin-dependent kinase 99.9 5.4E-26 1.9E-30 188.9 10.9 131 75-209 5-136 (136)
83 1d9s_A Cyclin-dependent kinase 99.9 1.4E-25 4.7E-30 186.4 12.4 129 25-171 4-133 (136)
84 2aja_A Ankyrin repeat family p 99.9 3.5E-27 1.2E-31 229.1 0.6 160 28-210 87-251 (376)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.7E-24 9.4E-29 175.3 15.6 126 81-209 1-126 (126)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-24 4.5E-29 180.4 13.9 127 78-207 10-136 (136)
87 2aja_A Ankyrin repeat family p 99.9 2.9E-27 1E-31 229.6 -2.6 223 3-253 96-353 (376)
88 3t8k_A Uncharacterized protein 99.9 7.2E-26 2.5E-30 198.5 5.8 150 82-236 6-172 (186)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 4.5E-24 1.5E-28 177.2 14.6 126 29-171 10-135 (136)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1E-23 3.5E-28 171.8 16.1 123 32-171 1-123 (126)
91 3deo_A Signal recognition part 99.9 3.1E-24 1.1E-28 187.7 11.5 141 30-206 41-181 (183)
92 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-23 3.6E-28 199.1 15.8 141 82-231 151-299 (301)
93 3ui2_A Signal recognition part 99.9 3.6E-24 1.2E-28 196.2 11.6 143 30-208 42-184 (244)
94 3c5r_A BARD-1, BRCA1-associate 99.9 4.2E-24 1.4E-28 177.5 8.5 128 77-207 5-132 (137)
95 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-23 3.7E-28 175.0 9.7 127 28-171 5-131 (137)
96 3deo_A Signal recognition part 99.9 1.4E-23 4.8E-28 183.5 8.8 137 78-236 40-177 (183)
97 2b0o_E UPLC1; arfgap, structur 99.9 9.7E-23 3.3E-27 192.4 15.0 148 31-197 149-299 (301)
98 3ehr_A Osteoclast-stimulating 99.9 2E-23 6.7E-28 188.3 9.3 130 78-210 69-199 (222)
99 3ui2_A Signal recognition part 99.9 1.9E-23 6.5E-28 191.4 9.2 137 78-236 41-178 (244)
100 3aaa_C Myotrophin, protein V-1 99.9 4.5E-23 1.5E-27 167.9 10.0 113 79-194 4-116 (123)
101 3ehr_A Osteoclast-stimulating 99.9 2.5E-23 8.6E-28 187.6 9.1 137 112-250 69-207 (222)
102 3aaa_C Myotrophin, protein V-1 99.9 7.9E-23 2.7E-27 166.5 11.2 116 30-162 4-119 (123)
103 1dcq_A PYK2-associated protein 99.9 2.2E-21 7.5E-26 181.1 17.9 179 29-209 62-263 (278)
104 3jue_A Arfgap with coiled-coil 99.8 7.6E-21 2.6E-25 183.8 13.9 149 78-229 195-348 (368)
105 3lvq_E ARF-GAP with SH3 domain 99.8 9.3E-21 3.2E-25 191.5 15.0 137 82-227 132-276 (497)
106 3jue_A Arfgap with coiled-coil 99.8 1.3E-20 4.3E-25 182.3 13.9 151 30-195 196-348 (368)
107 1dcq_A PYK2-associated protein 99.8 6.2E-21 2.1E-25 178.0 10.5 128 33-171 130-260 (278)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.2E-20 7.6E-25 144.0 11.6 91 116-208 2-92 (93)
109 3lvq_E ARF-GAP with SH3 domain 99.8 2.3E-20 8E-25 188.6 14.8 143 32-193 131-276 (497)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.4E-20 1.2E-24 142.9 12.2 92 32-140 1-92 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.8 4.3E-20 1.5E-24 148.3 9.1 107 78-187 5-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 6.1E-20 2.1E-24 147.3 9.8 109 111-222 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 1.4E-17 4.9E-22 132.4 10.7 96 23-135 14-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 1.6E-17 5.4E-22 132.2 9.5 91 111-203 19-109 (110)
115 3rhw_A Avermectin-sensitive gl 40.1 2.2E+02 0.0075 26.0 12.0 35 357-391 248-283 (347)
116 2knc_A Integrin alpha-IIB; tra 25.8 90 0.0031 20.1 3.8 16 379-394 10-25 (54)
117 3zrh_A Ubiquitin thioesterase 25.1 1.5E+02 0.0052 28.0 6.6 61 40-104 29-91 (454)
118 2l8s_A Integrin alpha-1; trans 24.2 1E+02 0.0035 19.9 3.8 16 379-394 7-22 (54)
119 1gp8_A Protein (scaffolding pr 22.8 59 0.002 19.2 2.2 19 37-55 17-35 (40)
120 4ev6_A Magnesium transport pro 21.1 2.4E+02 0.0081 25.7 7.4 20 356-375 282-301 (339)
121 3gvo_A Pumilio 2, pumilio homo 21.0 86 0.0029 28.9 4.4 154 77-232 68-231 (351)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5.1e-38 Score=290.13 Aligned_cols=209 Identities=23% Similarity=0.319 Sum_probs=180.4
Q ss_pred CcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHH
Q 040611 9 SSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHE 88 (434)
Q Consensus 9 ~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~ 88 (434)
.+..++++.|++.++++....|..|+||||+|+..|+.+++++|+++|++++ ..|..|.||||+
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g~t~L~~ 96 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN----------------IQDNMGRTPLHA 96 (253)
T ss_dssp -------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTSCCHHHH
T ss_pred CCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC----------------CCCCCCCCHHHH
Confidence 4489999999999999888889999999999999999999999999998865 478899999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHH
Q 040611 89 AVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVL 168 (434)
Q Consensus 89 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~L 168 (434)
|+..|+.+++++|++.++......|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|
T Consensus 97 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 176 (253)
T 1yyh_A 97 AVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176 (253)
T ss_dssp HHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999855557899999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 169 LESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 169 l~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+++ |++++.+|..|+||||+|+..|+.+++++|+++|++. +.+|..|+||+|+|+++|+.+++++
T Consensus 177 l~~--ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~g~~~i~~~ 241 (253)
T 1yyh_A 177 LKN--GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR-DITDHMDRLPRDIAQERMHHDIVRL 241 (253)
T ss_dssp HHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc-cccccCCCCHHHHHHHcCCHHHHHH
Confidence 999 8999999999999999999999999999999999987 5679999999999999999999876
No 2
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=9.2e-38 Score=292.17 Aligned_cols=216 Identities=24% Similarity=0.250 Sum_probs=185.4
Q ss_pred ccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 040611 26 LLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKED 105 (434)
Q Consensus 26 l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~ 105 (434)
++.+|.+|+||||+||..|+.++|++|++.|++.+ .++.+|..|.||||+|+..|+.+++++|++++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 68 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE-------------YLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSG-------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc-------------cccccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 56789999999999999999999999999988642 24568899999999999999999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC--------------------------------------------
Q 040611 106 PSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKS-------------------------------------------- 141 (434)
Q Consensus 106 ~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~-------------------------------------------- 141 (434)
+++. .+|..|.||||+|+..|+.+++++|++.+++
T Consensus 69 a~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (282)
T 1oy3_D 69 AGVL-VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDW 147 (282)
T ss_dssp CCSS-CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCG
T ss_pred CCCC-CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhh
Confidence 9876 7889999999999999999999999998754
Q ss_pred ---CCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCC-CCcHHHHHHHcCCHHHHHHHHhcCcccccccccC
Q 040611 142 ---PAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQ-GWRPLHLAAHLGYYDVVKELLKADKSAAYKADNE 217 (434)
Q Consensus 142 ---~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~-G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~ 217 (434)
++..+..|.||||.|+..|+.+++++|+++ |.+++.++.. |+||||+|+..|+.+++++|+++|+++ +.+|..
T Consensus 148 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~~ 224 (282)
T 1oy3_D 148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA--GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMYG 224 (282)
T ss_dssp GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred hhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-cccccC
Confidence 556788899999999999999999999999 8899998865 999999999999999999999999887 667999
Q ss_pred CCcHHHHHHHhCCcccccc--CCCccccccccCCcccccchhh
Q 040611 218 GKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSSRY 258 (434)
Q Consensus 218 g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~~~ 258 (434)
|+||||+|+..|+.++++. ..+++++.+|.+|.||.+....
T Consensus 225 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 225 GRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp SCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred CCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 9999999999999999987 7788899999999998765544
No 3
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-37 Score=282.89 Aligned_cols=214 Identities=23% Similarity=0.232 Sum_probs=196.5
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..++..|+.+.++++++.++..++.+|..|.||||+|+..|+.+++++|+++|.+++ ..|..|
T Consensus 10 l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g 73 (231)
T 3aji_A 10 ICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN----------------DKDDAG 73 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC----------------CCCTTS
T ss_pred HHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC----------------CcCCCC
Confidence 4677888999999999999998889999999999999999999999999999988755 368889
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCH
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDT 162 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~ 162 (434)
.||||+|+..|+.+++++|+++++++. ..|..|.||||+|+..|+.+++++|++.|.+++..+..|.||||.|+..|+.
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCHHHHHHHcCHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 999999999999999999999998865 6788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 163 EMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 163 ~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+++++|++. |.+++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|+||+|+|+..++.+++++
T Consensus 153 ~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~l 223 (231)
T 3aji_A 153 KMVHILLFY--KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI-YIENKEEKTPLQVAKGGLGLILKRL 223 (231)
T ss_dssp HHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHhc--CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHhhHHHHHHHH
Confidence 999999998 7899999999999999999999999999999999887 5679999999999998887776654
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2e-37 Score=298.84 Aligned_cols=244 Identities=21% Similarity=0.216 Sum_probs=218.0
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
++.++..|+.+.++.++...+..++.+|..|.||||+|+..|+.+++++|+++|++++ ..|..|
T Consensus 28 L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g 91 (351)
T 3utm_A 28 LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH----------------AKDKGG 91 (351)
T ss_dssp HHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------------ccCCCC
Confidence 5678899999999999998777788899999999999999999999999999998865 478899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC----------------
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHG---------------- 146 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~---------------- 146 (434)
.||||+|+..|+.+++++|++++++++ ..|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 92 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~ 170 (351)
T 3utm_A 92 LVPLHNACSYGHYEVTELLLKHGACVN-AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELR 170 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhH
Confidence 999999999999999999999999876 688999999999999999999999999998876544
Q ss_pred --------------------------------------CCCchHHHHHHhc---CCHHHHHHHHhcCcCcccccccCCCC
Q 040611 147 --------------------------------------PMGRTALHAVAFR---NDTEMTKVLLESSIGTQTSKVDQQGW 185 (434)
Q Consensus 147 --------------------------------------~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~g~~~~~~d~~G~ 185 (434)
..|.||||.|+.. +..+++++|++. |.+++.+|.+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~--g~~~~~~~~~g~ 248 (351)
T 3utm_A 171 ERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK--GANVNEKNKDFM 248 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT--TCCTTCCCTTCC
T ss_pred HHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc--CCCcCCcCCCCC
Confidence 4567999999998 558999999999 899999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCcccccchhhHHHHH
Q 040611 186 RPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSSRYEELEQ 263 (434)
Q Consensus 186 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~~~~~~~~ 263 (434)
||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++++. ..+++++.+|.+|+||.+... ++..+
T Consensus 249 t~L~~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~-~~~~~ 326 (351)
T 3utm_A 249 TPLHVAAERAHNDVMEVLHKHGAKM-NALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-EAVQQ 326 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC-HHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh-HHHHH
Confidence 9999999999999999999999887 5679999999999999999999987 678889999999999876653 33444
Q ss_pred HHhh
Q 040611 264 YVNK 267 (434)
Q Consensus 264 ~~~~ 267 (434)
++.+
T Consensus 327 ~l~~ 330 (351)
T 3utm_A 327 ILSE 330 (351)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4433
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=288.66 Aligned_cols=232 Identities=15% Similarity=0.115 Sum_probs=201.8
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.++++.|++.+.+ ++.+|.+|.||||+|+..|+.+++++|+++|++++ ..|..|
T Consensus 7 L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g 69 (261)
T 2xai_A 7 MHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN----------------GVTADW 69 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT----------------CCCTTS
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------------CCCCCC
Confidence 3467788999999999998876 77889999999999999999999999999998765 478899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCH
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDT 162 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~ 162 (434)
.||||+|+..|+.+++++|++.+++.. .+..|.||||+|+..|+.+++++|++.|++++..+..|+||||.|+..|+.
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 70 HTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 147 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCH
Confidence 999999999999999999999999875 456699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCccccccCCC---
Q 040611 163 EMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQGSN--- 239 (434)
Q Consensus 163 ~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~--- 239 (434)
+++++|++. |.+++. |..|+||||+|+..|+.+++++|++.|++. +.+|.+|+||+|+|+..++....-...+
T Consensus 148 ~~v~~Ll~~--g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpl~~A~~~~~~~~~ll~~~~~~ 223 (261)
T 2xai_A 148 ACVKKLLES--GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADT-QAKNAEGKRPVELVPPESPLAQLFLEREGPP 223 (261)
T ss_dssp HHHHHHHHH--TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGSCTTCTHHHHHHHC-CCC
T ss_pred HHHHHHHHc--CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCChhhhccccccHHHHHHhccCCc
Confidence 999999999 788885 899999999999999999999999999987 6679999999999996654322111111
Q ss_pred -----ccccccccCCcccccchh
Q 040611 240 -----TSIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 240 -----~~~~~~~~~g~t~~~~~~ 257 (434)
..++.+|..|+|+.+...
T Consensus 224 ~l~~~~~~~~r~~~g~t~l~~~~ 246 (261)
T 2xai_A 224 SLMQLCRLRIRKCFGIQQHHKIT 246 (261)
T ss_dssp CHHHHHHHHHHTTSCTTCGGGGG
T ss_pred cHHHHHHHHHHHHhchhccccCc
Confidence 245677888988766544
No 6
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.8e-37 Score=279.15 Aligned_cols=208 Identities=23% Similarity=0.320 Sum_probs=193.4
Q ss_pred cHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHH
Q 040611 10 SLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEA 89 (434)
Q Consensus 10 ~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A 89 (434)
|+.+++++|++.++++....|.+|+||||+|+..|+.+++++|+++|++++ ..|..|.||||+|
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g~t~L~~A 65 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN----------------IQDNMGRTPLHAA 65 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTSCCHHHHH
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCC----------------CcCCCCCCHHHHH
Confidence 667888999999999777789999999999999999999999999998755 4788999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHH
Q 040611 90 VRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLL 169 (434)
Q Consensus 90 a~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 169 (434)
+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|+
T Consensus 66 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 145 (223)
T 2f8y_A 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL 145 (223)
T ss_dssp HHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999999999999998556678999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 170 ESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 170 ~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
++ |.+++.+|..|+||||+|+..|+.+++++|++++++. +.+|..|.||+|+|++.++.+++++
T Consensus 146 ~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~~ 209 (223)
T 2f8y_A 146 KN--GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR-DITDHMDRLPRDIAQERMHHDIVRL 209 (223)
T ss_dssp HT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred Hc--CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-ccccccCCCHHHHHHHhcchHHHHH
Confidence 99 8999999999999999999999999999999999987 5679999999999999999999876
No 7
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=285.76 Aligned_cols=232 Identities=18% Similarity=0.161 Sum_probs=194.9
Q ss_pred ccccCCcHHHHHHHHHhcC----------CccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHH
Q 040611 4 FKKQSSSLEHFVTDILEMS----------PGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATL 73 (434)
Q Consensus 4 ~~a~~~~~~~~v~~ll~~~----------~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 73 (434)
..++.+|+.+.+..++... ...++.+|.+|+||||+||..|+.+++++|++.|.+++
T Consensus 20 H~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~------------- 86 (285)
T 3d9h_A 20 HMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN------------- 86 (285)
T ss_dssp ----------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC-------------
T ss_pred HHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------------
Confidence 4577788877777765443 22356788999999999999999999999999988754
Q ss_pred hhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHH
Q 040611 74 MLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTAL 153 (434)
Q Consensus 74 ~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L 153 (434)
.+|..|.||||+|+..|+.+++++|++.+++++ ..|..|.||||+|+..|+.+++++|++.|++++.. .+|.|||
T Consensus 87 ---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L 161 (285)
T 3d9h_A 87 ---IITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPI 161 (285)
T ss_dssp ---EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CTTSCHH
T ss_pred ---CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC-CCCCCHH
Confidence 578999999999999999999999999999865 78999999999999999999999999999888754 4599999
Q ss_pred HHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCccc
Q 040611 154 HAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGER 233 (434)
Q Consensus 154 h~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~ 233 (434)
|.|+..|+.+++++|++. |.+++.+|.+|+||||+|+..|+.+++++|++.+++.. .|..|+||||+|+..|+.++
T Consensus 162 ~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~~ 237 (285)
T 3d9h_A 162 HEAARRGHVECVNSLIAY--GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVVRTASEEL 237 (285)
T ss_dssp HHHHHHTCHHHHHHHHHT--TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHH
Confidence 999999999999999999 78999999999999999999999999999999998874 38999999999999999999
Q ss_pred ccc--CCCccccccccCCcccccchh
Q 040611 234 NEQ--GSNTSIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 234 ~~~--~~~~~~~~~~~~g~t~~~~~~ 257 (434)
++. ..+++++.+|.+|+||.+...
T Consensus 238 v~~Ll~~gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 238 ACLLMDFGADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp HHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHhc
Confidence 987 678889999999999876653
No 8
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-36 Score=282.46 Aligned_cols=236 Identities=19% Similarity=0.191 Sum_probs=214.1
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.+++++|++.++++....+..|.||||+|+..|+.+++++|+++|++++ ..|..|
T Consensus 9 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g 72 (285)
T 1wdy_A 9 LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV----------------LRKKNG 72 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc----------------ccCCCC
Confidence 4567889999999999999988655558899999999999999999999999998765 468899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC----------CCCCchH
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGH----------GPMGRTA 152 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~----------~~~g~t~ 152 (434)
.||||+|+..|+.+++++|+++++++. ..|..|.||||+|+..|+.+++++|++.|++++.. +..|.||
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~ 151 (285)
T 1wdy_A 73 ATPFLLAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 151 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcH
Confidence 999999999999999999999999865 67899999999999999999999999999988876 7889999
Q ss_pred HHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCC----HHHHHHHHhcCcccccccccCCCcHHHHHHHh
Q 040611 153 LHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGY----YDVVKELLKADKSAAYKADNEGKIPLHLAAVF 228 (434)
Q Consensus 153 Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 228 (434)
||.|+..|+.+++++|++.. +.+++.+|..|+||||+|+..++ .+++++|++.+++. +.+|..|+||||+|+..
T Consensus 152 L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 229 (285)
T 1wdy_A 152 LMDAAEKGHVEVLKILLDEM-GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEK 229 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTS-CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHhc-CCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHc
Confidence 99999999999999999864 58899999999999999999999 99999999999887 56799999999999999
Q ss_pred CCcccccc---CCCccccccccCCcccccchh
Q 040611 229 GNGERNEQ---GSNTSIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 229 g~~~~~~~---~~~~~~~~~~~~g~t~~~~~~ 257 (434)
|+.++++. ..+++++.+|.+|+||.+...
T Consensus 230 ~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~ 261 (285)
T 1wdy_A 230 KHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 261 (285)
T ss_dssp TCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHHhccCCCccccCCCCCcHHHHHH
Confidence 99999887 378889999999999876543
No 9
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.5e-36 Score=275.19 Aligned_cols=218 Identities=21% Similarity=0.232 Sum_probs=197.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcC--CCCCc
Q 040611 33 GETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKED--PSLPY 110 (434)
Q Consensus 33 g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~--~~~~~ 110 (434)
|+||||.|+..|+.++++.|++.+.+.. ...|..|.||||+|+..|+.+++++|++.+ ++...
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 66 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLL---------------LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD 66 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGT---------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGG
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcccc---------------ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc
Confidence 7899999999999999999999987632 347899999999999999999999999999 55554
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHH
Q 040611 111 DANNAGETPLYLAAERGYKDVMQDIFLTC--KSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPL 188 (434)
Q Consensus 111 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpL 188 (434)
..|..|.||||+|+..|+.+++++|++.| .+++..+..|.||||.|+..|+.+++++|+++ |.+++.+|..|+|||
T Consensus 67 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L 144 (228)
T 2dzn_A 67 YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN--GASVRIKDKFNQIPL 144 (228)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc--CCCccccCCCCCCHH
Confidence 47889999999999999999999999998 88889999999999999999999999999999 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc---CCCccccccccCCcccccchhhHHHHHHH
Q 040611 189 HLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ---GSNTSIEDKNNNDRKEKSSSRYEELEQYV 265 (434)
Q Consensus 189 h~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~---~~~~~~~~~~~~g~t~~~~~~~~~~~~~~ 265 (434)
|+|+..|+.+++++|++.++...+.+|..|+||||+|+..|+.++++. ..+++++.+|.+|+||.+....++..+++
T Consensus 145 ~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~~~l 224 (228)
T 2dzn_A 145 HRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFF 224 (228)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999944557789999999999999999999887 45889999999999998887777666766
Q ss_pred hh
Q 040611 266 NK 267 (434)
Q Consensus 266 ~~ 267 (434)
.+
T Consensus 225 ~~ 226 (228)
T 2dzn_A 225 LN 226 (228)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 10
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.5e-37 Score=276.48 Aligned_cols=214 Identities=22% Similarity=0.215 Sum_probs=194.1
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.++++.|++.+++....+|..|+||||+|+..|+.+++++|++.|++.+. ....|..|
T Consensus 6 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-------------~~~~~~~g 72 (228)
T 2dzn_A 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL-------------DDYPDDSG 72 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCG-------------GGCCCTTS
T ss_pred HHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccc-------------cccCCCCC
Confidence 45678899999999999999998888999999999999999999999999999965432 11278899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcC--CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC
Q 040611 83 DKALHEAVRYNRVEVVKMVTKED--PSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRN 160 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~--~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g 160 (434)
.||||+|+..|+.+++++|++.+ +++. ..|..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 151 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPDLN-KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG 151 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcccc-cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 99999999999999999999998 6654 67889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHH-hcCcccccccccCCCcHHHHHHHhCCcc
Q 040611 161 DTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELL-KADKSAAYKADNEGKIPLHLAAVFGNGE 232 (434)
Q Consensus 161 ~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll-~~~~~~~~~~d~~g~tpLh~A~~~g~~~ 232 (434)
+.+++++|++.++ .+++.+|.+|+||||+|+..|+.+++++|+ +.|++. +.+|.+|+||+|+|++.+..+
T Consensus 152 ~~~~v~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~-~~~~~~g~t~l~~A~~~~~~~ 222 (228)
T 2dzn_A 152 SLKLIELLCGLGK-SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY-DLVDNKGAKAEDVALNEQVKK 222 (228)
T ss_dssp CHHHHHHHHTTTC-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS-CCBCTTSCBGGGGCSSTTHHH
T ss_pred CHHHHHHHHhcCc-ccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCcHHHHHHHHHHHH
Confidence 9999999999932 899999999999999999999999999999 788877 667999999999997765433
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.6e-37 Score=283.75 Aligned_cols=225 Identities=24% Similarity=0.257 Sum_probs=170.6
Q ss_pred ccCcCCCCChHHHHHHHcC-------------CHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHc
Q 040611 26 LLKANTKGETLLHIAGRHG-------------HVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRY 92 (434)
Q Consensus 26 l~~~~~~g~TpLh~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~ 92 (434)
++.+|.+|+||||+|+..| +.++++.|++.|++.+. ..|..|.||||+|+..
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~---------------~~d~~g~t~L~~A~~~ 67 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN---------------QTDRTGETALHLAARY 67 (253)
T ss_dssp ----------------------------------------------------------------CCCTTSCCHHHHHHHT
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccc---------------ccCCCCCcHHHHHHHc
Confidence 5678999999999999987 89999999999887532 4689999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCchHHHHHHhcCCHHHHHHHHhc
Q 040611 93 NRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCK-SPAGHGPMGRTALHAVAFRNDTEMTKVLLES 171 (434)
Q Consensus 93 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 171 (434)
|+.+++++|++.++++. ..|..|.||||+|+..|+.+++++|++.+. +++..+..|.||||.|+..|+.+++++|++.
T Consensus 68 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 146 (253)
T 1yyh_A 68 SRSDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 146 (253)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc
Confidence 99999999999999876 788999999999999999999999999986 8899999999999999999999999999998
Q ss_pred CcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCC
Q 040611 172 SIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNND 249 (434)
Q Consensus 172 ~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g 249 (434)
|.+++.+|.+|+||||+|+..|+.+++++|+++|++. +.+|..|+||||+|+..|+.++++. ..+++++.+|..|
T Consensus 147 --g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 223 (253)
T 1yyh_A 147 --HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 223 (253)
T ss_dssp --TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred --CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCC
Confidence 8999999999999999999999999999999999987 5679999999999999999999987 6778899999999
Q ss_pred cccccchhh---HHHHHHHhhhh
Q 040611 250 RKEKSSSRY---EELEQYVNKNK 269 (434)
Q Consensus 250 ~t~~~~~~~---~~~~~~~~~~~ 269 (434)
+||.+.... .+..+++....
T Consensus 224 ~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 224 RLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHHh
Confidence 998765543 34555555443
No 12
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=289.49 Aligned_cols=208 Identities=18% Similarity=0.164 Sum_probs=166.5
Q ss_pred cccccCCcHHHHHHHHHhcCCcc-------ccCcCCCCChHHHHHHHcCCH-HHHHHHHHhcCCCCCCChhhHHHHHHHh
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGL-------LLKANTKGETLLHIAGRHGHV-DIVKDLIAECKKPHQNDPEKVIEAATLM 74 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~-------l~~~~~~g~TpLh~Aa~~g~~-~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 74 (434)
++.|+..|+.++|++|++.+.+. ++..+..|.||||.|+..++. ++++.|++.|++++
T Consensus 15 L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn-------------- 80 (269)
T 4b93_B 15 LLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVN-------------- 80 (269)
T ss_dssp HHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTT--------------
T ss_pred HHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCC--------------
Confidence 67899999999999999887653 456678899999999998876 48899999999865
Q ss_pred hccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHH
Q 040611 75 LGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALH 154 (434)
Q Consensus 75 l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh 154 (434)
.+|.+|+||||+|+..|+.+++++|++.+++.. ..+..|.||+|+|+..++.+++++|++.|++++..|..|+||||
T Consensus 81 --~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~-~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~ 157 (269)
T 4b93_B 81 --VTSQDGSSPLHVAALHGRADLIPLLLKHGANAG-ARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLI 157 (269)
T ss_dssp --CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHH
T ss_pred --CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcC-ccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 478999999999999999999999999999865 78899999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCC
Q 040611 155 AVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGN 230 (434)
Q Consensus 155 ~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 230 (434)
+|+..|+.+++++|+++ |+++|.+|..|+||||+|+..|+.+++++|+++|+++ +.+|++|+||||+|+++++
T Consensus 158 ~A~~~g~~~~v~~Ll~~--gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~-~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 158 YACSGGHHELVALLLQH--GASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV-QVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHTTCGGGHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCSGGGSCTTCH
T ss_pred HHHHCCCHHHHHHHHHC--CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHhCCc
Confidence 99999999999999999 8999999999999999999999999999999999987 6779999999999998775
No 13
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4e-36 Score=274.57 Aligned_cols=214 Identities=24% Similarity=0.255 Sum_probs=169.2
Q ss_pred ccCcCCCCChHHHHHHHcCCHHHHHHHHH----hcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHH
Q 040611 26 LLKANTKGETLLHIAGRHGHVDIVKDLIA----ECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMV 101 (434)
Q Consensus 26 l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~----~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~L 101 (434)
++.+|.+|+||||+||..|+.+++++|++ .+.++ +..|..|.||||+|+..|+.+++++|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~----------------~~~~~~g~t~L~~A~~~~~~~~v~~L 65 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL----------------DIYNNLRQTPLHLAVITTLPSVVRLL 65 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS----------------CCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC----------------CcccccCCCHHHHHHHcCCHHHHHHH
Confidence 45678888888888888888888888887 34443 34677888888888888888888888
Q ss_pred HhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCC----CCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCccc
Q 040611 102 TKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCK----SPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQT 177 (434)
Q Consensus 102 l~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~ 177 (434)
++.++++. ..|..|.||||+|+..|+.+++++|++.+. +++..+..|.||||.|+..|+.+++++|++. |.++
T Consensus 66 l~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~ 142 (241)
T 1k1a_A 66 VTAGASPM-ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER--GADI 142 (241)
T ss_dssp HHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCT
T ss_pred HHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc--CCCc
Confidence 88887755 567888888888888888888888888876 6777788888888888888888888888888 6778
Q ss_pred cccc-CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCccccc
Q 040611 178 SKVD-QQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKS 254 (434)
Q Consensus 178 ~~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~ 254 (434)
+..| ..|+||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|+..|+.++++. ..+++++.+|..|+||.+
T Consensus 143 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 221 (241)
T 1k1a_A 143 DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLM 221 (241)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTT
T ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHH
Confidence 8777 77888888888888888888888888776 5568888888888888888888776 567777888888888866
Q ss_pred chhhH
Q 040611 255 SSRYE 259 (434)
Q Consensus 255 ~~~~~ 259 (434)
.....
T Consensus 222 ~A~~~ 226 (241)
T 1k1a_A 222 VARSR 226 (241)
T ss_dssp TCSSH
T ss_pred HHHhc
Confidence 55444
No 14
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.4e-36 Score=277.69 Aligned_cols=214 Identities=18% Similarity=0.148 Sum_probs=196.9
Q ss_pred cccccCCcHHHHHHHHHh---cCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhcccc
Q 040611 3 TFKKQSSSLEHFVTDILE---MSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTN 79 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~---~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (434)
+..|+..|+.+++++|++ ..+..++.+|..|.||||+|+..|+.+++++|++.|++++ ..|
T Consensus 13 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------------~~~ 76 (241)
T 1k1a_A 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM----------------ALD 76 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc----------------ccC
Confidence 356788899999999997 3445578889999999999999999999999999998865 368
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCC----CCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCchHHH
Q 040611 80 EAKDKALHEAVRYNRVEVVKMVTKEDP----SLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHG-PMGRTALH 154 (434)
Q Consensus 80 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~----~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~Lh 154 (434)
..|.||||+|+..|+.+++++|++.++ ++ ...|..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||
T Consensus 77 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~ 155 (241)
T 1k1a_A 77 RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLI 155 (241)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHH
Confidence 899999999999999999999999987 43 3678899999999999999999999999999999888 88999999
Q ss_pred HHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccc
Q 040611 155 AVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERN 234 (434)
Q Consensus 155 ~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~ 234 (434)
.|+..|+.+++++|+++ |.+++.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|+..|+.+++
T Consensus 156 ~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~i~ 232 (241)
T 1k1a_A 156 HAVENNSLSMVQLLLQH--GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS-SLKNCHNDTPLMVARSRRVIDIL 232 (241)
T ss_dssp HHHHTTCHHHHHHHHHT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCTTTTCSSHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC-CCcCCCCCCHHHHHHhcCcHHHH
Confidence 99999999999999999 8999999999999999999999999999999999987 66799999999999999999988
Q ss_pred cc
Q 040611 235 EQ 236 (434)
Q Consensus 235 ~~ 236 (434)
+.
T Consensus 233 ~~ 234 (241)
T 1k1a_A 233 RG 234 (241)
T ss_dssp TC
T ss_pred hh
Confidence 76
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.2e-36 Score=274.82 Aligned_cols=211 Identities=24% Similarity=0.271 Sum_probs=183.8
Q ss_pred ccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 040611 26 LLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKED 105 (434)
Q Consensus 26 l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~ 105 (434)
++.+|.+|.||||+|+..|+.+++++|+++|.+++ ..+..|.||||+|+..|+.+++++|++.+
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 67 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANID----------------TCSEDQRTPLMEAAENNHLEAVKYLIKAG 67 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTT----------------CCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcC----------------ccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 45678889999999999999999999999988754 36778899999999999999999999998
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCC
Q 040611 106 PSLPYDANNAGETPLYLAAERGYKDVMQDIFLTC-KSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQG 184 (434)
Q Consensus 106 ~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G 184 (434)
.++. ..+..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||.|+..|+.+++++|++. |.+++.+|..|
T Consensus 68 ~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g 144 (237)
T 3b7b_A 68 ALVD-PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK--GSDINIRDNEE 144 (237)
T ss_dssp CCCC-CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTS
T ss_pred CCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCC
Confidence 8765 67888999999999999999999999988 78888888999999999999999999999998 78889999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCcccccch
Q 040611 185 WRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSS 256 (434)
Q Consensus 185 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~ 256 (434)
+||||+|+..|+.+++++|++.+++. +.+|..|.||||+|+..|+.++++. ..+++++.+|.+|+||.+..
T Consensus 145 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 145 NICLHWAAFSGCVDIAEILLAAKCDL-HAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCA 217 (237)
T ss_dssp CCHHHHHHHHCCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHS
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 99999999999999999999988877 5568889999999999999998886 67788888899999975443
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.1e-35 Score=271.14 Aligned_cols=211 Identities=20% Similarity=0.228 Sum_probs=195.3
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++ ..+..|
T Consensus 15 L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------------~~~~~g 77 (237)
T 3b7b_A 15 LHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD----------------PKDAEG 77 (237)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC----------------CCCTTS
T ss_pred HHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC----------------CCCCCC
Confidence 3457788999999999999877 67789999999999999999999999999998765 368889
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCH
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDT 162 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~ 162 (434)
.||||+|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..|+.
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence 99999999999999999999999655557899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCccc
Q 040611 163 EMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGER 233 (434)
Q Consensus 163 ~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~ 233 (434)
+++++|++. |.+++.+|..|+||||+|++.|+.+++++|+++|++. +.+|++|+||||+|+.+|+.+.
T Consensus 158 ~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~t~l~~A~~~~~~~~ 225 (237)
T 3b7b_A 158 DIAEILLAA--KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV-TLKNKEGETPLQCASLNSQVWS 225 (237)
T ss_dssp HHHHHHHTT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHSCTTCHHHH
T ss_pred HHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC-CccCCCCCCHHHHHHHHHHHHH
Confidence 999999999 8999999999999999999999999999999999987 5679999999999999887643
No 17
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.5e-36 Score=287.72 Aligned_cols=241 Identities=23% Similarity=0.260 Sum_probs=203.0
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhH---------------
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKV--------------- 67 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~--------------- 67 (434)
++.|+.+|+.++|+.||+.+.++....+..|+||||+||..|+.++|++|+++|++++..+....
T Consensus 29 L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (337)
T 4g8k_A 29 LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLL 108 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhh
Confidence 46789999999999999999884433445699999999999999999999999999877653321
Q ss_pred --HHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCc---------cCCCCCCcHHHHHHHcCCHHHHHHHH
Q 040611 68 --IEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPY---------DANNAGETPLYLAAERGYKDVMQDIF 136 (434)
Q Consensus 68 --~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~---------~~~~~g~tpLh~A~~~g~~~~v~~Ll 136 (434)
.......++..|..|.||||+|+..|+.+++++|++.++++.. ..+..|.||||+|+..|+.+++++|+
T Consensus 109 ~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL 188 (337)
T 4g8k_A 109 KLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL 188 (337)
T ss_dssp HHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHH
Confidence 1111223567889999999999999999999999999887642 23567999999999999999999999
Q ss_pred h-cCCCCCCCCCCCchHHHHHHhcCC----HHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccc
Q 040611 137 L-TCKSPAGHGPMGRTALHAVAFRND----TEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAA 211 (434)
Q Consensus 137 ~-~~~~~~~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~ 211 (434)
+ .|++++..|..|.|++|.++..+. .+++++|+++ |++++.+|.+|+||||+|+..|+.++++.|++.+....
T Consensus 189 ~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~--gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v 266 (337)
T 4g8k_A 189 DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH--GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI 266 (337)
T ss_dssp HHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT--TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT
T ss_pred hccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc
Confidence 6 489999999999999998876543 4588999999 89999999999999999999999999999998654445
Q ss_pred cccccCCCcHHHHHHHhCCcccccc--CCCcccccc
Q 040611 212 YKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDK 245 (434)
Q Consensus 212 ~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~ 245 (434)
+.+|.+|+||||+|++.|+.++++. ..+++++.+
T Consensus 267 n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~ 302 (337)
T 4g8k_A 267 NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 302 (337)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 7789999999999999999999987 666666543
No 18
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=8.8e-36 Score=276.47 Aligned_cols=204 Identities=21% Similarity=0.201 Sum_probs=187.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCcc
Q 040611 32 KGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYD 111 (434)
Q Consensus 32 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~ 111 (434)
+|+||||+|+..|+.+++++|+++|.+++ ..|..|.||||+|+..|+.+++++|++++++++ .
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~ 64 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVN----------------IITADHVSPLHEACLGGHLSCVKILLKHGAQVN-G 64 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSS----------------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------------CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-C
Confidence 68999999999999999999999998755 478899999999999999999999999999866 7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHH
Q 040611 112 ANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLA 191 (434)
Q Consensus 112 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A 191 (434)
.|..|.||||+|+..|+.+++++|++.|++++. +.+|.||||.|+..|+.+++++|+++ |.+++.+|.+|+||||+|
T Consensus 65 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A 141 (261)
T 2xai_A 65 VTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAY--GGNIDHKISHLGTPLYLA 141 (261)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBTTTBCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCcCCCCCCCHHHHH
Confidence 899999999999999999999999999998875 45699999999999999999999999 889999999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCcccccchh
Q 040611 192 AHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 192 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~~ 257 (434)
+..|+.+++++|++.+++.. . |..|+||||+|+..|+.++++. ..+++++.+|.+|+||.+...
T Consensus 142 ~~~~~~~~v~~Ll~~g~~~~-~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~ 207 (261)
T 2xai_A 142 CENQQRACVKKLLESGADVN-Q-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP 207 (261)
T ss_dssp HHTTCHHHHHHHHHHTCCTT-C-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred HHhCCHHHHHHHHHcCCCCC-C-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcc
Confidence 99999999999999998874 3 8899999999999999999987 678889999999999876553
No 19
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.9e-36 Score=281.11 Aligned_cols=209 Identities=21% Similarity=0.191 Sum_probs=177.5
Q ss_pred cccccCCcHHHHHHHHHhcCCc--cccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPG--LLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNE 80 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~--~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (434)
+..|+..|+.+++++|++.+.+ .++.+|..|+||||+|+..|+.+++++|+++|++++ ..|.
T Consensus 13 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------------~~~~ 76 (282)
T 1oy3_D 13 LHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL----------------VAER 76 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS----------------CCCT
T ss_pred HHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------------CCCC
Confidence 3567888999999999987665 478889999999999999999999999999999865 4788
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCC----------------------------------------------CccCCC
Q 040611 81 AKDKALHEAVRYNRVEVVKMVTKEDPSL----------------------------------------------PYDANN 114 (434)
Q Consensus 81 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~----------------------------------------------~~~~~~ 114 (434)
.|.||||+|+..|+.+++++|++++++. ....|.
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCT
T ss_pred CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC
Confidence 9999999999999999999999987652 235678
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHH
Q 040611 115 AGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPM-GRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAH 193 (434)
Q Consensus 115 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~ 193 (434)
.|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+.
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~--gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA--GADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHT
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc--CCCCcccccCCCCHHHHHHH
Confidence 8999999999999999999999999999988854 99999999999999999999999 89999999999999999999
Q ss_pred cCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCC
Q 040611 194 LGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGN 230 (434)
Q Consensus 194 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 230 (434)
.|+.+++++|+++|+++ +.+|.+|.||+++|.....
T Consensus 235 ~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 235 RPNPILARLLRAHGAPE-PEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp SSCHHHHHHHHHTTCCC-CCCC---------------
T ss_pred cCCcHHHHHHHHcCCCc-CcCCCcccccccccCCccc
Confidence 99999999999999997 5679999999999987653
No 20
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-35 Score=295.78 Aligned_cols=249 Identities=23% Similarity=0.285 Sum_probs=200.9
Q ss_pred ccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhH-----------HHHHH
Q 040611 4 FKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKV-----------IEAAT 72 (434)
Q Consensus 4 ~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~-----------~~~~~ 72 (434)
..|+..|+.++++.|++.+.+ ....+..|.||||+|+..|+.+++++|+++|++++..+..+. ....+
T Consensus 118 ~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 196 (437)
T 1n11_A 118 HIAAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK 196 (437)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 456677888888888887766 455677788888888888888888888888877665432210 00011
Q ss_pred H------hhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 040611 73 L------MLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHG 146 (434)
Q Consensus 73 ~------~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~ 146 (434)
. .....+..|.||||+|+..|+.++++.|++.+.+.+ ..+..|.||||+|+..|+.+++++|++.+++++..+
T Consensus 197 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 275 (437)
T 1n11_A 197 LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN-AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 275 (437)
T ss_dssp HHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCC
Confidence 1 123456678899999999999999999998888765 678889999999999999999999999998888888
Q ss_pred CCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHH
Q 040611 147 PMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAA 226 (434)
Q Consensus 147 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 226 (434)
..|.||||.|+..|+.+++++|+++ |.+++.+|..|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+
T Consensus 276 ~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~L~~A~ 352 (437)
T 1n11_A 276 KSGLTPLHLVAQEGHVPVADVLIKH--GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADV-NAKTKLGYSPLHQAA 352 (437)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhC--CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHH
Confidence 8999999999999999999999988 7888999999999999999999999999999988877 566889999999999
Q ss_pred HhCCcccccc--CCCccccccccCCcccccchh
Q 040611 227 VFGNGERNEQ--GSNTSIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 227 ~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~~ 257 (434)
..|+.++++. ..+++++.+|.+|+||.+...
T Consensus 353 ~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 353 QQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred HCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 9999999887 667888888999999865543
No 21
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-35 Score=274.88 Aligned_cols=223 Identities=23% Similarity=0.282 Sum_probs=202.8
Q ss_pred ccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCC
Q 040611 4 FKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKD 83 (434)
Q Consensus 4 ~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 83 (434)
..|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..|..|.
T Consensus 44 ~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------------~~~~~g~ 106 (285)
T 1wdy_A 44 HNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN----------------ECDFYGF 106 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT----------------CBCTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------------ccCcccC
Confidence 456778999999999999877 67789999999999999999999999999998755 4788999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCccC---------CCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCchHH
Q 040611 84 KALHEAVRYNRVEVVKMVTKEDPSLPYDA---------NNAGETPLYLAAERGYKDVMQDIFLT-CKSPAGHGPMGRTAL 153 (434)
Q Consensus 84 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~---------~~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L 153 (434)
||||+|+..|+.+++++|++.+++..... +..|.||||+|+..|+.+++++|++. |.+++..+..|+|||
T Consensus 107 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l 186 (285)
T 1wdy_A 107 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 186 (285)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred CHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHH
Confidence 99999999999999999999998876332 77899999999999999999999998 899999999999999
Q ss_pred HHHHhcCC----HHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHh-cCcccccccccCCCcHHHHHHHh
Q 040611 154 HAVAFRND----TEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLK-ADKSAAYKADNEGKIPLHLAAVF 228 (434)
Q Consensus 154 h~A~~~g~----~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~-~~~~~~~~~d~~g~tpLh~A~~~ 228 (434)
|.|+..++ .+++++|++. |.+++.+|..|+||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|++.
T Consensus 187 ~~a~~~~~~~~~~~i~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~~~~g~t~l~~A~~~ 263 (285)
T 1wdy_A 187 IHALLSSDDSDVEAITHLLLDH--GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDSDGKTALLLAVEL 263 (285)
T ss_dssp HHHHHCSCTTTHHHHHHHHHHT--TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCT-TCCCTTSCCHHHHHHHT
T ss_pred HHHHHccccchHHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCc-cccCCCCCcHHHHHHHc
Confidence 99999999 8999999999 89999999999999999999999999999999 66665 67799999999999999
Q ss_pred CCcccccc--CCCccccccc
Q 040611 229 GNGERNEQ--GSNTSIEDKN 246 (434)
Q Consensus 229 g~~~~~~~--~~~~~~~~~~ 246 (434)
|+.+++++ ..+++++.+|
T Consensus 264 ~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 264 KLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp TCHHHHHHHHHHSSCSCCSS
T ss_pred CcHHHHHHHHHcCCCCCccc
Confidence 99999987 5666666665
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=7.3e-35 Score=264.68 Aligned_cols=220 Identities=24% Similarity=0.298 Sum_probs=198.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 040611 30 NTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLP 109 (434)
Q Consensus 30 ~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~ 109 (434)
+..++||||.|++.|+.+.++.|++.+.. ..+..|..|.||||+|+..|+.+++++|++.+.++.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~---------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 67 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKS---------------LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN 67 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGG---------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchh---------------hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC
Confidence 45689999999999999999999998654 245678999999999999999999999999998865
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHH
Q 040611 110 YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLH 189 (434)
Q Consensus 110 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh 189 (434)
..|..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|++. |.+++.+|..|+||||
T Consensus 68 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~ 144 (231)
T 3aji_A 68 -DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG--GANPDAKDHYDATAMH 144 (231)
T ss_dssp -CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHH
T ss_pred -CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCcHHH
Confidence 6889999999999999999999999999999999999999999999999999999999999 8899999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCcccccchh---hHHHHHH
Q 040611 190 LAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSSR---YEELEQY 264 (434)
Q Consensus 190 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~~---~~~~~~~ 264 (434)
+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.++++. ..+++++.+|..|+||.+... ..+..++
T Consensus 145 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~l 223 (231)
T 3aji_A 145 RAAAKGNLKMVHILLFYKAST-NIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRL 223 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcCCCc-cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHH
Confidence 999999999999999999887 5669999999999999999999987 668888999999999866553 3345555
Q ss_pred Hhhh
Q 040611 265 VNKN 268 (434)
Q Consensus 265 ~~~~ 268 (434)
+.+.
T Consensus 224 L~~~ 227 (231)
T 3aji_A 224 AEGE 227 (231)
T ss_dssp HHHH
T ss_pred Hccc
Confidence 5544
No 23
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=276.72 Aligned_cols=209 Identities=16% Similarity=0.151 Sum_probs=190.3
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.++++.|++.+.+ ++.+|.+|+||||+|+..|+.+++++|+++|++++ ..|..|
T Consensus 63 L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------------~~~~~g 125 (285)
T 3d9h_A 63 MHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN----------------GVTADW 125 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS----------------CCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC----------------CCCCCC
Confidence 3467788999999999999877 77889999999999999999999999999998765 478899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCH
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDT 162 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~ 162 (434)
.||||+|+..|+.+++++|++.+++.. .+..|.||||+|+..|+.+++++|++.|++++..|..|+||||.|+..|+.
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 126 HTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 203 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred CCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 999999999999999999999999875 455699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 163 EMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 163 ~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+++++|++. |.+++. |..|+||||+|+..|+.+++++|+++|++. +.+|.+|+||||+|+. +.++++.
T Consensus 204 ~~v~~Ll~~--ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~t~l~~A~~--~~~~~~~ 271 (285)
T 3d9h_A 204 ACVKKLLES--GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADT-QAKNAEGKRPVELVPP--ESPLAQL 271 (285)
T ss_dssp HHHHHHHHT--TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGSCT--TSHHHHH
T ss_pred HHHHHHHHC--CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHhcC--ccHHHHH
Confidence 999999999 788885 899999999999999999999999999887 6679999999999994 3445443
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.2e-35 Score=288.89 Aligned_cols=212 Identities=20% Similarity=0.202 Sum_probs=192.3
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.++|++|+++|++. .+..|
T Consensus 24 L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------------------~~~~g 84 (364)
T 3ljn_A 24 IHVAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH------------------SLWHG 84 (364)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC------------------CCBTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc------------------cccCC
Confidence 4567788999999999999876 6788999999999999999999999999999853 24578
Q ss_pred ChHHHHHHHcCCHHHHHHHHhc----CCCCCc----------------cCCCCCCcHHHHHHHcC--CHHHHHHHHhcCC
Q 040611 83 DKALHEAVRYNRVEVVKMVTKE----DPSLPY----------------DANNAGETPLYLAAERG--YKDVMQDIFLTCK 140 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~----~~~~~~----------------~~~~~g~tpLh~A~~~g--~~~~v~~Ll~~~~ 140 (434)
.||||+|+..|+.+++++|++. +.+... ..|..|.||||+|+..| +.+++++|++.|+
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga 164 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 9999999999999999999998 555331 16778999999999999 9999999999999
Q ss_pred CCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcc-----cccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccc
Q 040611 141 SPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQ-----TSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKAD 215 (434)
Q Consensus 141 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~-----~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d 215 (434)
+++..|..|+||||+|+..|+.+++++|+++ |.+ ++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|
T Consensus 165 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-~~~d 241 (364)
T 3ljn_A 165 SPTAKDKADETPLMRAMEFRNREALDLMMDT--VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV-NMED 241 (364)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH--CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT-TCCC
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHhc--ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCC
Confidence 9999999999999999999999999999998 566 9999999999999999999999999999999987 6679
Q ss_pred cCCCcHHHHHHHhCCcccccc
Q 040611 216 NEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 216 ~~g~tpLh~A~~~g~~~~~~~ 236 (434)
.+|+||||+|+..|+.++++.
T Consensus 242 ~~g~tpL~~A~~~g~~~~v~~ 262 (364)
T 3ljn_A 242 NEHTVPLYLSVRAAMVLLTKE 262 (364)
T ss_dssp TTSCCHHHHHHHTCCHHHHHH
T ss_pred CCCCCHHHHHHHhChHHHHHH
Confidence 999999999999999999876
No 25
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-35 Score=290.63 Aligned_cols=231 Identities=26% Similarity=0.306 Sum_probs=175.9
Q ss_pred ccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCC
Q 040611 4 FKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKD 83 (434)
Q Consensus 4 ~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 83 (434)
..|+..|+.++|++|++++.+ .+..|..|.||||+|+..|+.+++++|+++|++++. +|..|.
T Consensus 19 ~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----------------~~~~g~ 81 (437)
T 1n11_A 19 HVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA----------------KAKDDQ 81 (437)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSC----------------CCTTSC
T ss_pred HHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC----------------CCCCCC
Confidence 457788999999999998776 567788999999999999999999999999988654 566777
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHH
Q 040611 84 KALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTE 163 (434)
Q Consensus 84 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~ 163 (434)
||||+|+..|+.+++++|++++++.+ ..+..|.||||+|+..|+.+++++|++.+.+.+..+..|.||||.|+..|+.+
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPN-LATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 77777777777777777777777654 56677777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCcc
Q 040611 164 MTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTS 241 (434)
Q Consensus 164 ~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~ 241 (434)
++++|+++ +.+++..|..|.||||+|+..|+.+++++|++++.+. +..+.+|.||||+|+..|+.++++. ..+.+
T Consensus 161 ~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 237 (437)
T 1n11_A 161 VAELLLER--DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS 237 (437)
T ss_dssp HHHHHHHT--TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHhC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 77777777 6677777777777777777777777777777777665 3446677777777777777777665 44555
Q ss_pred ccccccCCcccccc
Q 040611 242 IEDKNNNDRKEKSS 255 (434)
Q Consensus 242 ~~~~~~~g~t~~~~ 255 (434)
++.++..|.||.+.
T Consensus 238 ~~~~~~~g~t~L~~ 251 (437)
T 1n11_A 238 ANAESVQGVTPLHL 251 (437)
T ss_dssp TTCCCTTCCCHHHH
T ss_pred CCCCCCCCCCHHHH
Confidence 66666677766443
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=275.60 Aligned_cols=219 Identities=19% Similarity=0.206 Sum_probs=168.2
Q ss_pred cCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCH-HHHHHHHhcC
Q 040611 27 LKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRV-EVVKMVTKED 105 (434)
Q Consensus 27 ~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~-~~v~~Ll~~~ 105 (434)
.++|.++.|||+.||..|+.++|++|++.+++..... ...++..+..|.||||.|+..++. ++++.|++.|
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~--------~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~G 76 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDA--------EDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASG 76 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHHTCC------------------------------------------------CC
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccc--------cccccccCccCCCHHHHHHHhCCHHHHHHHHHHCC
Confidence 3467788999999999999999999999987643211 122456788999999999988876 5889999999
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCC
Q 040611 106 PSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGW 185 (434)
Q Consensus 106 ~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~ 185 (434)
.+++ .+|.+|+||||+|+..|+.+++++|++.+++++..+.+|.||+|.|+..++.++++.|++. |++++.+|..|+
T Consensus 77 advn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~--g~~~n~~d~~g~ 153 (269)
T 4b93_B 77 LGVN-VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS--NAKPNKKDLSGN 153 (269)
T ss_dssp CCTT-CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHC--CCCCCCCCCCCC
Confidence 9976 7899999999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCcccccchh
Q 040611 186 RPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 186 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~~ 257 (434)
||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++++. ..+++++.+|.+|+||.+...
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999999987 6679999999999999999999987 678899999999999977653
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.1e-34 Score=263.71 Aligned_cols=187 Identities=22% Similarity=0.269 Sum_probs=172.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHh-cCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC-
Q 040611 32 KGETLLHIAGRHGHVDIVKDLIAE-CKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLP- 109 (434)
Q Consensus 32 ~g~TpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~- 109 (434)
.|+||||.|++.|+.+++++|++. |.+++ .+|..|+||||+|+..|+.+++++|++.+++..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~----------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 65 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVH----------------QRGAMGETALHIAALYDNLEAAMVLMEAAPELVF 65 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTT----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcc----------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcc
Confidence 589999999999999999999997 77654 478999999999999999999999999998753
Q ss_pred ---ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-------------CCchHHHHHHhcCCHHHHHHHHhcCc
Q 040611 110 ---YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGP-------------MGRTALHAVAFRNDTEMTKVLLESSI 173 (434)
Q Consensus 110 ---~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~-------------~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 173 (434)
...|..|.||||+|+..|+.+++++|++.|++++..+. .|.||||.|+..|+.+++++|+++
T Consensus 66 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-- 143 (232)
T 2rfa_A 66 EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-- 143 (232)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT--
T ss_pred ccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC--
Confidence 35677999999999999999999999999999887765 799999999999999999999999
Q ss_pred CcccccccCCCCcHHHHHHHcCCHHHH----HHHHhcCcccc-----cccccCCCcHHHHHHHhCCcccccc
Q 040611 174 GTQTSKVDQQGWRPLHLAAHLGYYDVV----KELLKADKSAA-----YKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 174 g~~~~~~d~~G~TpLh~A~~~g~~~iv----~~Ll~~~~~~~-----~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
|++++.+|.+|+||||+|+..|+.+++ ++|++.+++.. +.+|..|+||||+|++.|+.++++.
T Consensus 144 ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~ 215 (232)
T 2rfa_A 144 GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQH 215 (232)
T ss_dssp TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHH
Confidence 899999999999999999999999988 99999988764 5779999999999999999999876
No 28
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=262.45 Aligned_cols=214 Identities=21% Similarity=0.213 Sum_probs=190.1
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|.+.+. ..+..|
T Consensus 13 l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~---------------~~~~~~ 76 (240)
T 3eu9_A 13 IVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ---------------LGGDLN 76 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------------CBTTTT
T ss_pred HHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh---------------hcCCcC
Confidence 5678888999999999998876 677888999999999999999999999999887553 345668
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCC-
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRND- 161 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~- 161 (434)
.||||+|+..|+.+++++|++.+++.. ..|..|.||||+|+..|+.+++++|++.|.+++..+..|.||||.|+..++
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPS-LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCh
Confidence 999999999999999999999988865 678889999999999999999999999999999999999999999996665
Q ss_pred HHHHHHHHhcCcCcccccccC-CCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 162 TEMTKVLLESSIGTQTSKVDQ-QGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 162 ~~~v~~Ll~~~~g~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
.+++++|++. +.+++..+. .|+||||+|+..|+.+++++|+++|++. +.+|..|+||||+|++.|+.++++.
T Consensus 156 ~~~~~~L~~~--~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~v~~ 228 (240)
T 3eu9_A 156 VDPTRLLLTF--NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV-DAQNIKGESALDLAKQRKNVWMINH 228 (240)
T ss_dssp STTHHHHHHT--TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhc--CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 7899999998 788888887 8999999999999999999999998877 5678999999999999999988876
No 29
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.6e-35 Score=275.09 Aligned_cols=233 Identities=21% Similarity=0.260 Sum_probs=200.4
Q ss_pred ccCCcHHHHHHHHHhcCCccc--------cCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhcc
Q 040611 6 KQSSSLEHFVTDILEMSPGLL--------LKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGM 77 (434)
Q Consensus 6 a~~~~~~~~v~~ll~~~~~~l--------~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~ 77 (434)
++.++..+.++.++.....+- ...+.+|.||||.||..|+.+++++|+++|++++ .
T Consensus 5 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~----------------~ 68 (299)
T 1s70_B 5 DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADIN----------------Y 68 (299)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTT----------------C
T ss_pred HHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCc----------------c
Confidence 345566666677776544421 1224468899999999999999999999998765 4
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 040611 78 TNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVA 157 (434)
Q Consensus 78 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~ 157 (434)
.|..|.||||+|+..|+.+++++|++.+++++ ..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 147 (299)
T 1s70_B 69 ANVDGLTALHQACIDDNVDMVKFLVENGANIN-QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAE 147 (299)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHH
Confidence 78899999999999999999999999999876 68899999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHhcCcCccc--------------------------ccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccc
Q 040611 158 FRNDTEMTKVLLESSIGTQT--------------------------SKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAA 211 (434)
Q Consensus 158 ~~g~~~~v~~Ll~~~~g~~~--------------------------~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~ 211 (434)
..++.++++.++... +.++ ...+..|.||||+|+..|+.+++++|++.|+++
T Consensus 148 ~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~- 225 (299)
T 1s70_B 148 EEAMEELLQNEVNRQ-GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV- 225 (299)
T ss_dssp SHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-
T ss_pred hcchHHHHHHHHhhc-CCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC-
Confidence 999999998887642 2332 235678999999999999999999999999887
Q ss_pred cccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCcccccchh
Q 040611 212 YKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 212 ~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~~ 257 (434)
+.+|.+|+||||+|+..|+.++++. ..+++++.+|..|+||.+...
T Consensus 226 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 226 NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred CCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 5679999999999999999999987 678889999999999876553
No 30
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=7.7e-35 Score=273.74 Aligned_cols=213 Identities=18% Similarity=0.152 Sum_probs=187.5
Q ss_pred CCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHH
Q 040611 8 SSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALH 87 (434)
Q Consensus 8 ~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh 87 (434)
+.+..++.+.|.+. .++.+|.+|.||||+|+..|+.+++++|+++|++++. . +|.||||
T Consensus 9 ~~~~~~v~~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----------------~--~g~t~L~ 67 (285)
T 3kea_A 9 TWKSKQLKSFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL----------------L--ENEFPLH 67 (285)
T ss_dssp GCCHHHHHHHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC----------------C--TTCCHHH
T ss_pred hcCHHHHHHHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC----------------C--CCCCHHH
Confidence 33445555555444 2678899999999999999999999999999987543 2 4899999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC-chHHHHHHhcCCHHHHH
Q 040611 88 EAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMG-RTALHAVAFRNDTEMTK 166 (434)
Q Consensus 88 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g-~t~Lh~A~~~g~~~~v~ 166 (434)
+|+..|+.+++++|++++++++ .+|..|.||||+|+..|+.+++++|+++|++++..+..| .||||.|+..|+.++++
T Consensus 68 ~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~ 146 (285)
T 3kea_A 68 QAATLEDTKIVKILLFSGLDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVS 146 (285)
T ss_dssp HHTTSSSCHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999999976 688999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHhcCcCcccccccC-CCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcH-HHHHHHhCCcccccc--CCCccc
Q 040611 167 VLLESSIGTQTSKVDQ-QGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIP-LHLAAVFGNGERNEQ--GSNTSI 242 (434)
Q Consensus 167 ~Ll~~~~g~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp-Lh~A~~~g~~~~~~~--~~~~~~ 242 (434)
+|+++ |.+. .|. .|+||||+|+..|+.+++++|+++|+++ +.+|..|+|| ||+|+..|+.++++. ..++++
T Consensus 147 ~Ll~~--g~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~ 221 (285)
T 3kea_A 147 YFLSE--IPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINI 221 (285)
T ss_dssp HHHTT--SCTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCS
T ss_pred HHHhC--CCcc--ccccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99998 4444 333 8999999999999999999999999887 6679999998 999999999999987 667777
Q ss_pred ccccc
Q 040611 243 EDKNN 247 (434)
Q Consensus 243 ~~~~~ 247 (434)
+.+|.
T Consensus 222 ~~~~~ 226 (285)
T 3kea_A 222 YSANL 226 (285)
T ss_dssp TTTTG
T ss_pred CCCCh
Confidence 77764
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2e-35 Score=269.67 Aligned_cols=212 Identities=22% Similarity=0.278 Sum_probs=181.6
Q ss_pred CcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 040611 28 KANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPS 107 (434)
Q Consensus 28 ~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~ 107 (434)
.+|.+|+||||+|+..|+.+++++|++.+..... .++..|..|.||||+|+..|+.+++++|++++++
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 70 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLA------------FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD 70 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CC------------CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHH------------HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4688999999999999999999999988764211 2456889999999999999999999999999998
Q ss_pred CCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC------CCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCccccccc
Q 040611 108 LPYDANNAGETPLYLAAERGYKDVMQDIFLTCKS------PAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVD 181 (434)
Q Consensus 108 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~------~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d 181 (434)
+. .+|..|.||||+|+..|+.+++++|++.+.+ .+..+..|.||||+|+..|+.+++++|+++ |.+++.+|
T Consensus 71 ~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~ 147 (236)
T 1ikn_D 71 PE-LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL--GADVNAQE 147 (236)
T ss_dssp SC-CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCC
T ss_pred CC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCC
Confidence 65 6889999999999999999999999999875 356788899999999999999999999999 89999999
Q ss_pred C-CCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCc--cccccccCCcccccc
Q 040611 182 Q-QGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNT--SIEDKNNNDRKEKSS 255 (434)
Q Consensus 182 ~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~--~~~~~~~~g~t~~~~ 255 (434)
. .|+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.++++. ..++ ....++.+|.++...
T Consensus 148 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 148 PCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT 225 (236)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhh
Confidence 8 9999999999999999999999999887 5679999999999999999999887 4444 334677778776543
No 32
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-34 Score=282.84 Aligned_cols=212 Identities=20% Similarity=0.212 Sum_probs=189.5
Q ss_pred cccCCcHHHHHHHHH--------hcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhc
Q 040611 5 KKQSSSLEHFVTDIL--------EMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLG 76 (434)
Q Consensus 5 ~a~~~~~~~~v~~ll--------~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~ 76 (434)
.|+..|+.++++.|+ +.+.+ ++.+|.+|.||||+|+..|+.++|++|+++|++++
T Consensus 131 ~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~---------------- 193 (373)
T 2fo1_E 131 WIASNSSAEKSEDLIVHEAKECIAAGAD-VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT---------------- 193 (373)
T ss_dssp HHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC----------------
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHhcCCC-CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCc----------------
Confidence 355666666666655 56655 78889999999999999999999999999999865
Q ss_pred cccCCCChHHHHHHHcCCHHHHHHHHhcC---CCCCccCCCCCCcHHHHHHHcC---CHHHHHHHHhcCCCCCC------
Q 040611 77 MTNEAKDKALHEAVRYNRVEVVKMVTKED---PSLPYDANNAGETPLYLAAERG---YKDVMQDIFLTCKSPAG------ 144 (434)
Q Consensus 77 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~---~~~~~~~~~~g~tpLh~A~~~g---~~~~v~~Ll~~~~~~~~------ 144 (434)
..|..|.||||+|+..|+.+++++|++.+ .++. ..|..|.||||+|+..| +.+++++|++.|++++.
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 272 (373)
T 2fo1_E 194 IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE-ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 272 (373)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh-hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccccc
Confidence 47889999999999999999999999987 4544 67899999999999998 89999999999998875
Q ss_pred --CCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHH
Q 040611 145 --HGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPL 222 (434)
Q Consensus 145 --~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 222 (434)
.|..|.||||+|+..|+.+++++|++.. +.+++.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 273 ~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~-~~~d~~g~t~l 350 (373)
T 2fo1_E 273 DSEKYKGRTALHYAAQVSNMPIVKYLVGEK-GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV-EAVDATDHTAR 350 (373)
T ss_dssp SSSSCCCCCTHHHHHSSCCHHHHHHHHHHS-CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCSSSCCHH
T ss_pred CcccccCCCHHHHHHHhCCHHHHHHHHHhc-CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cCCCCCCCCHH
Confidence 5678999999999999999999999884 3899999999999999999999999999999999987 56799999999
Q ss_pred HHHHHhCCcccccc
Q 040611 223 HLAAVFGNGERNEQ 236 (434)
Q Consensus 223 h~A~~~g~~~~~~~ 236 (434)
|+|+.+|+.+++++
T Consensus 351 ~~A~~~g~~~iv~~ 364 (373)
T 2fo1_E 351 QLAQANNHHNIVDI 364 (373)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 99999999999876
No 33
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.2e-34 Score=281.96 Aligned_cols=211 Identities=21% Similarity=0.256 Sum_probs=190.4
Q ss_pred ccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 040611 26 LLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKED 105 (434)
Q Consensus 26 l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~ 105 (434)
.+..|.+|.||||+||..|+.++|++|+++|++++ ..|..|.||||+|+..|+.+++++|++.+
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~----------------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 76 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPT----------------IQNRFGCTALHLACKFGCVDTAKYLASVG 76 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTT----------------CCCTTCCCHHHHHHHHCCHHHHHHHHHHC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----------------ccCCCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 45678899999999999999999999999998765 47889999999999999999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhc----CCCCCC-----------------CCCCCchHHHHHHhcC--CH
Q 040611 106 PSLPYDANNAGETPLYLAAERGYKDVMQDIFLT----CKSPAG-----------------HGPMGRTALHAVAFRN--DT 162 (434)
Q Consensus 106 ~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~----~~~~~~-----------------~~~~g~t~Lh~A~~~g--~~ 162 (434)
++. .+..|.||||+|+..|+.+++++|++. +.+++. .+..|.||||+|+..| +.
T Consensus 77 ~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 153 (364)
T 3ljn_A 77 EVH---SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYL 153 (364)
T ss_dssp CCC---CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGH
T ss_pred CCc---cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchH
Confidence 964 345899999999999999999999998 766665 7788999999999999 99
Q ss_pred HHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCccc----ccccccCCCcHHHHHHHhCCcccccc--
Q 040611 163 EMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSA----AYKADNEGKIPLHLAAVFGNGERNEQ-- 236 (434)
Q Consensus 163 ~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~----~~~~d~~g~tpLh~A~~~g~~~~~~~-- 236 (434)
+++++|++. |++++.+|..|+||||+|+..|+.+++++|++++++. .+..|..|+||||+|+..|+.++++.
T Consensus 154 ~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 231 (364)
T 3ljn_A 154 EMIKILVQL--GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFV 231 (364)
T ss_dssp HHHHHHHHH--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 999999999 8999999999999999999999999999999988872 36679999999999999999999987
Q ss_pred CCCccccccccCCcccccchh
Q 040611 237 GSNTSIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 237 ~~~~~~~~~~~~g~t~~~~~~ 257 (434)
..+++++.+|.+|.||.+...
T Consensus 232 ~~gad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 232 EMGIDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp TTTCCTTCCCTTSCCHHHHHH
T ss_pred HcCCCCCCCCCCCCCHHHHHH
Confidence 778899999999999876543
No 34
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.8e-33 Score=269.75 Aligned_cols=204 Identities=21% Similarity=0.192 Sum_probs=186.4
Q ss_pred ccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCC
Q 040611 4 FKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKD 83 (434)
Q Consensus 4 ~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 83 (434)
..|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ ..|..|.
T Consensus 63 ~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~----------------~~~~~g~ 125 (351)
T 3utm_A 63 HLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVN----------------AMDLWQF 125 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC----------------CCCCCCC
Confidence 456778999999999999877 77889999999999999999999999999998865 4788999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCc-----------------------------------------------------
Q 040611 84 KALHEAVRYNRVEVVKMVTKEDPSLPY----------------------------------------------------- 110 (434)
Q Consensus 84 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~----------------------------------------------------- 110 (434)
||||+|+..|+.+++++|++++++...
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 205 (351)
T 3utm_A 126 TPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINF 205 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccc
Confidence 999999999999999999999887542
Q ss_pred cCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcH
Q 040611 111 DANNAGETPLYLAAER---GYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRP 187 (434)
Q Consensus 111 ~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~Tp 187 (434)
..+..|.||||+|+.. +..+++++|++.|.+++..+..|+||||.|+..|+.+++++|+++ |++++.+|..|+||
T Consensus 206 ~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~n~~d~~g~t~ 283 (351)
T 3utm_A 206 KQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH--GAKMNALDSLGQTA 283 (351)
T ss_dssp CCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCH
T ss_pred cCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCH
Confidence 2346788999999999 558999999999999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHH
Q 040611 188 LHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAV 227 (434)
Q Consensus 188 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 227 (434)
||+|+..|+.+++++|+++|+++ +.+|..|+||+|+|..
T Consensus 284 L~~A~~~~~~~~v~~Ll~~gad~-~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 284 LHRAALAGHLQTCRLLLSYGSDP-SIISLQGFTAAQMGNE 322 (351)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHSCH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCChhhhhhH
Confidence 99999999999999999999987 5679999999999843
No 35
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.8e-34 Score=269.63 Aligned_cols=205 Identities=25% Similarity=0.322 Sum_probs=184.5
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.++++.|++.+.+ ++..|.+|.||||+||..|+.+++++|+++|++++ ..|..|
T Consensus 44 l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------------~~~~~g 106 (299)
T 1s70_B 44 FLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANIN----------------QPDNEG 106 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTS
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------------CCCCCC
Confidence 3567788999999999999877 77889999999999999999999999999998865 478899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCC--------------------
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLT-CKS-------------------- 141 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~-------------------- 141 (434)
.||||+|+..|+.+++++|+++++++. ..|..|.||||+|+..|+.++++.++.. +.+
T Consensus 107 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (299)
T 1s70_B 107 WIPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWL 185 (299)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHH
Confidence 999999999999999999999999866 6899999999999999999998877653 222
Q ss_pred ------CCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccc
Q 040611 142 ------PAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKAD 215 (434)
Q Consensus 142 ------~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d 215 (434)
....+..|.||||.|+..|+.+++++|++. |.+++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|
T Consensus 186 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d 262 (299)
T 1s70_B 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA--RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM-EAVN 262 (299)
T ss_dssp HHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC
T ss_pred hccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC-CCcC
Confidence 233567899999999999999999999998 8999999999999999999999999999999999987 5679
Q ss_pred cCCCcHHHHHHHh
Q 040611 216 NEGKIPLHLAAVF 228 (434)
Q Consensus 216 ~~g~tpLh~A~~~ 228 (434)
..|+||||+|++.
T Consensus 263 ~~g~t~l~~A~~~ 275 (299)
T 1s70_B 263 KVGQTAFDVADED 275 (299)
T ss_dssp TTSCCTTTSCCSG
T ss_pred CCCCCHHHHHHHH
Confidence 9999999999653
No 36
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.2e-33 Score=240.19 Aligned_cols=158 Identities=30% Similarity=0.391 Sum_probs=147.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCC
Q 040611 35 TLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANN 114 (434)
Q Consensus 35 TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~ 114 (434)
++|+.||+.|+.++|+.|+++|++++ .+|..|+||||+|+..|+.++++.|++.++++. .+|.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn----------------~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~-~~d~ 68 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVN----------------ASDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDS 68 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCC----------------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh-hhcc
Confidence 57999999999999999999999865 478999999999999999999999999999976 7899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHc
Q 040611 115 AGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHL 194 (434)
Q Consensus 115 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~ 194 (434)
.|+||||+|+..|+.+++++|++.|++++.+|.+|+||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|++.
T Consensus 69 ~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~--gad~~~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 69 DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK--GADVNTSDSDGRTPLDLAREH 146 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CCHHHHHHHHhcCcccc
Q 040611 195 GYYDVVKELLKADKSAA 211 (434)
Q Consensus 195 g~~~iv~~Ll~~~~~~~ 211 (434)
|+.+++++|+++|+++.
T Consensus 147 g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 147 GNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp TCHHHHHHHHTC-----
T ss_pred CCHHHHHHHHHCCCCcC
Confidence 99999999999999773
No 37
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.1e-33 Score=246.45 Aligned_cols=188 Identities=20% Similarity=0.263 Sum_probs=159.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcC-CCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 040611 30 NTKGETLLHIAGRHGHVDIVKDLIAECK-KPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSL 108 (434)
Q Consensus 30 ~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ 108 (434)
+..+.||||.|+..|+.+.++.|++.+. ++ +..|..|.||||+|+..|+.+++++|+++++++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~----------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 65 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQV----------------DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI 65 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCT----------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCC----------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4568899999999999999999988765 33 346788899999999999999999999998886
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcH
Q 040611 109 PYDANNAGETPLYLAAERGYKDVMQDIFL-TCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRP 187 (434)
Q Consensus 109 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~Tp 187 (434)
. ..|..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||.|+..|+.+++++|++.++ .+++.+|..|+||
T Consensus 66 ~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~g~t~ 143 (201)
T 3hra_A 66 N-LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR-EDIDFQNDFGYTA 143 (201)
T ss_dssp T-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC-CCTTCCCTTSCCH
T ss_pred C-CCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcCCCCCCCCCH
Confidence 5 678889999999999999999999984 457888888889999999999999999999998832 7888889999999
Q ss_pred HHHHHHcCC-----HHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 188 LHLAAHLGY-----YDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 188 Lh~A~~~g~-----~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
||+|+..++ .+++++|+++|+++ +.+|.+|+||||+|+..|+.++++.
T Consensus 144 L~~A~~~~~~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~ 196 (201)
T 3hra_A 144 LIEAVGLREGNQLYQDIVKLLMENGADQ-SIKDNSGRTAMDYANQKGYTEISKI 196 (201)
T ss_dssp HHHHHHSSCCSHHHHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHhccchhhHHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHcCCHhHHHH
Confidence 999998887 88999999988877 5668889999999999998888764
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.4e-33 Score=254.46 Aligned_cols=223 Identities=18% Similarity=0.197 Sum_probs=199.0
Q ss_pred ccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 040611 26 LLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKED 105 (434)
Q Consensus 26 l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~ 105 (434)
++..|..|.||||.|+..|+.+++++|++.|.+++ ..|..|.||||+|+..|+.+++++|++.+
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 65 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVR----------------QPDKENVTLLHWAAINNRIDLVKYYISKG 65 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcC----------------CCCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 35568899999999999999999999999998754 46889999999999999999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCC
Q 040611 106 PSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGW 185 (434)
Q Consensus 106 ~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~ 185 (434)
++.....+..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|+++ |.+++.+|..|+
T Consensus 66 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~g~ 143 (240)
T 3eu9_A 66 AIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK--GQDVDMMDQNGM 143 (240)
T ss_dssp CCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSC
T ss_pred CcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc--CCCccccCCCCC
Confidence 998877778899999999999999999999999999999999999999999999999999999999 789999999999
Q ss_pred cHHHHHHHcCC-HHHHHHHHhcCccccccccc-CCCcHHHHHHHhCCcccccc--CCCccccccccCCcccccchhh---
Q 040611 186 RPLHLAAHLGY-YDVVKELLKADKSAAYKADN-EGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSSRY--- 258 (434)
Q Consensus 186 TpLh~A~~~g~-~~iv~~Ll~~~~~~~~~~d~-~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~~~--- 258 (434)
||||+|+..++ .+++++|++.+.+.... +. .|.||||+|+..|+.++++. ..+++++.+|.+|.||.+....
T Consensus 144 t~l~~a~~~~~~~~~~~~L~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 222 (240)
T 3eu9_A 144 TPLMWAAYRTHSVDPTRLLLTFNVSVNLG-DKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN 222 (240)
T ss_dssp CHHHHHHHHCCSSTTHHHHHHTTCCTTCC-CTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred cHHHHHHHhCChHHHHHHHHhcCCCcchh-hccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 99999997766 89999999999888544 54 89999999999999999987 5678889999999998655433
Q ss_pred HHHHHHHhh
Q 040611 259 EELEQYVNK 267 (434)
Q Consensus 259 ~~~~~~~~~ 267 (434)
.+..+++.+
T Consensus 223 ~~~v~~L~~ 231 (240)
T 3eu9_A 223 VWMINHLQE 231 (240)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344555544
No 39
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=7.9e-33 Score=245.71 Aligned_cols=186 Identities=23% Similarity=0.262 Sum_probs=168.4
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcC-CCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKAN-TKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEA 81 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~-~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (434)
++.++..|+.+.++.+++.++..++ .. .+|.||||+|+..|+.+++++|+++|++++ ..|..
T Consensus 9 L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------------~~~~~ 71 (201)
T 3hra_A 9 LLEAANQRDTKKVKEILQDTTYQVD-EVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN----------------LQNSI 71 (201)
T ss_dssp HHHHHHTTCHHHHHHHHTCTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----------------CCCTT
T ss_pred HHHHHHhccHHHHHHHHHcCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------------CCCCC
Confidence 4678889999999999998774332 23 248999999999999999999999998865 47889
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCchHHHHHHhcC
Q 040611 82 KDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTC-KSPAGHGPMGRTALHAVAFRN 160 (434)
Q Consensus 82 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~Lh~A~~~g 160 (434)
|.||||+|+..|+.+++++|++.+.......|..|.||||+|+..|+.+++++|++.| .+++..|..|+||||.|+..+
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence 9999999999999999999997665445578999999999999999999999999999 899999999999999999998
Q ss_pred C-----HHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 040611 161 D-----TEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKAD 207 (434)
Q Consensus 161 ~-----~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 207 (434)
+ .+++++|+++ |++++.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 152 ~~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 152 EGNQLYQDIVKLLMEN--GADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCSHHHHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred cchhhHHHHHHHHHHC--CCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 8 9999999999 8999999999999999999999999999999875
No 40
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=5.4e-34 Score=278.32 Aligned_cols=213 Identities=23% Similarity=0.242 Sum_probs=190.5
Q ss_pred ccCcC-CCCChHHHHHHHcCCHHHHHHHH--------HhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHH
Q 040611 26 LLKAN-TKGETLLHIAGRHGHVDIVKDLI--------AECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVE 96 (434)
Q Consensus 26 l~~~~-~~g~TpLh~Aa~~g~~~~v~~Ll--------~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~ 96 (434)
++.+| ..|+||||+||..|+.+++++|+ +.|++++ ..|..|.||||+|+..|+.+
T Consensus 117 ~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn----------------~~d~~g~TpL~~A~~~g~~~ 180 (373)
T 2fo1_E 117 VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN----------------AMDCDENTPLMLAVLARRRR 180 (373)
T ss_dssp TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT----------------CCCTTSCCHHHHHHHHTCHH
T ss_pred ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCc----------------CCCCCCCCHHHHHHHcChHH
Confidence 45566 78999999999999998888776 6777654 47899999999999999999
Q ss_pred HHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcC---CCCCCCCCCCchHHHHHHhcC---CHHHHHHHHh
Q 040611 97 VVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTC---KSPAGHGPMGRTALHAVAFRN---DTEMTKVLLE 170 (434)
Q Consensus 97 ~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~---~~~~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~ 170 (434)
++++|+++++++. ..|..|.||||+|+..|+.+++++|++.+ .+++..|..|.||||+|+..+ +.+++++|++
T Consensus 181 iv~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~ 259 (373)
T 2fo1_E 181 LVAYLMKAGADPT-IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVE 259 (373)
T ss_dssp HHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHH
T ss_pred HHHHHHHCCCCCc-ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHH
Confidence 9999999999876 78899999999999999999999999988 789999999999999999998 8999999999
Q ss_pred cCcCccccc--------ccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCc
Q 040611 171 SSIGTQTSK--------VDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNT 240 (434)
Q Consensus 171 ~~~g~~~~~--------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~ 240 (434)
. |.+++. +|..|+||||+|+..|+.+++++|++.+....+.+|.+|+||||+|+..|+.++++. ..++
T Consensus 260 ~--g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 337 (373)
T 2fo1_E 260 K--GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA 337 (373)
T ss_dssp H--TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred C--CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9 677665 678999999999999999999999998744447789999999999999999999987 6788
Q ss_pred cccccccCCcccccchh
Q 040611 241 SIEDKNNNDRKEKSSSR 257 (434)
Q Consensus 241 ~~~~~~~~g~t~~~~~~ 257 (434)
+++.+|..|+||.+...
T Consensus 338 d~~~~d~~g~t~l~~A~ 354 (373)
T 2fo1_E 338 SVEAVDATDHTARQLAQ 354 (373)
T ss_dssp CSSCCCSSSCCHHHHHH
T ss_pred CccCCCCCCCCHHHHHH
Confidence 89999999999876543
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.7e-33 Score=260.12 Aligned_cols=191 Identities=17% Similarity=0.102 Sum_probs=169.2
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHc---CCHHHHHHHHhc
Q 040611 32 KGETLLHIAGRHGHVD----IVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRY---NRVEVVKMVTKE 104 (434)
Q Consensus 32 ~g~TpLh~Aa~~g~~~----~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~ 104 (434)
.|+||||.|+..|+.+ ++++|++.|.+++.. ....|..|.||||+|+.. |+.+++++|++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~------------~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~ 68 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDS------------AYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI 68 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSG------------GGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccc------------cccCCCCCCCHHHHHHHccccchHHHHHHHHhc
Confidence 4889999999999997 567777788875420 012689999999999999 999999999999
Q ss_pred CCCCCc----------cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-------------CchHHHHHHhcCC
Q 040611 105 DPSLPY----------DANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPM-------------GRTALHAVAFRND 161 (434)
Q Consensus 105 ~~~~~~----------~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------g~t~Lh~A~~~g~ 161 (434)
+++... ..|..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+
T Consensus 69 g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~ 148 (256)
T 2etb_A 69 DKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQ 148 (256)
T ss_dssp HHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC
T ss_pred CCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCC
Confidence 876542 23578999999999999999999999999999988876 9999999999999
Q ss_pred HHHHHHHHh---cCcCcccccccCCCCcHHHHHHH--cCCHH-------HHHHHHhcCcccc------cccccCCCcHHH
Q 040611 162 TEMTKVLLE---SSIGTQTSKVDQQGWRPLHLAAH--LGYYD-------VVKELLKADKSAA------YKADNEGKIPLH 223 (434)
Q Consensus 162 ~~~v~~Ll~---~~~g~~~~~~d~~G~TpLh~A~~--~g~~~-------iv~~Ll~~~~~~~------~~~d~~g~tpLh 223 (434)
.+++++|++ . |++++.+|.+|+||||+|+. .++.+ ++++|+++|++.. +.+|.+|+||||
T Consensus 149 ~~~v~~Ll~~~~~--ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 149 WDVVTYLLENPHQ--PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp HHHHHHHHHCSSC--CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred HHHHHHHHhcccc--CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 999999999 6 89999999999999999999 88888 9999999998873 567999999999
Q ss_pred HHHHhCCcccccc
Q 040611 224 LAAVFGNGERNEQ 236 (434)
Q Consensus 224 ~A~~~g~~~~~~~ 236 (434)
+|+..|+.++++.
T Consensus 227 ~A~~~g~~~~v~~ 239 (256)
T 2etb_A 227 LAAKEGKIEIFRH 239 (256)
T ss_dssp HHHHTTCHHHHHH
T ss_pred HHHHhCCHHHHHH
Confidence 9999999999876
No 42
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=4.4e-34 Score=266.66 Aligned_cols=201 Identities=16% Similarity=0.132 Sum_probs=170.3
Q ss_pred ccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHc---CCHHHHHHHH
Q 040611 26 LLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRY---NRVEVVKMVT 102 (434)
Q Consensus 26 l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll 102 (434)
.+..|..|+||||.|++.|+.++|+.|++.+.+....-.+ .....|..|.||||+|+.. |+.+++++|+
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll 77 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTD--------SEFKDPETGKTCLLKAMLNLHNGQNDTIALLL 77 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTS--------GGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHH
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCC--------cccccCcCCCCHHHHHHHHHhcCChHHHHHHH
Confidence 3557889999999999999999999999865432210000 0113588999999999987 9999999999
Q ss_pred hcCCCCC----------ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------CCchHHHHHHh
Q 040611 103 KEDPSLP----------YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGP--------------MGRTALHAVAF 158 (434)
Q Consensus 103 ~~~~~~~----------~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~--------------~g~t~Lh~A~~ 158 (434)
+.+++.. ...|..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+.
T Consensus 78 ~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~ 157 (273)
T 2pnn_A 78 DVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC 157 (273)
T ss_dssp HHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHH
T ss_pred HhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHH
Confidence 9875421 12567899999999999999999999999999998887 79999999999
Q ss_pred cCCHHHHHHHHh---cCcCcccccccCCCCcHHHHHHHcCC---------HHHHHHHHhcCcccc------cccccCCCc
Q 040611 159 RNDTEMTKVLLE---SSIGTQTSKVDQQGWRPLHLAAHLGY---------YDVVKELLKADKSAA------YKADNEGKI 220 (434)
Q Consensus 159 ~g~~~~v~~Ll~---~~~g~~~~~~d~~G~TpLh~A~~~g~---------~~iv~~Ll~~~~~~~------~~~d~~g~t 220 (434)
.|+.+++++|++ . |++++.+|.+|+||||+|+..|+ .+++++|+++|++.. +.+|.+|+|
T Consensus 158 ~g~~~~v~~Ll~~~~~--gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~T 235 (273)
T 2pnn_A 158 TNQLAIVKFLLQNSWQ--PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLT 235 (273)
T ss_dssp TTCHHHHHHHHHCSSC--CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCC
T ss_pred cCCHHHHHHHHhcccC--CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCC
Confidence 999999999999 6 89999999999999999999998 899999999998874 357999999
Q ss_pred HHHHHHHhCCcccccc
Q 040611 221 PLHLAAVFGNGERNEQ 236 (434)
Q Consensus 221 pLh~A~~~g~~~~~~~ 236 (434)
|||+|++.|+.++++.
T Consensus 236 pL~~A~~~g~~~iv~~ 251 (273)
T 2pnn_A 236 PLALAASSGKIGVLAY 251 (273)
T ss_dssp HHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhChHHHHHH
Confidence 9999999999999887
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.3e-32 Score=250.09 Aligned_cols=195 Identities=20% Similarity=0.242 Sum_probs=173.1
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.++++.|++..+..++.+|..|+||||+|+..|+.+++++|++.|++.... .....|..|
T Consensus 7 L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----------~~~~~~~~g 75 (232)
T 2rfa_A 7 LLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFE-----------PMTSELYEG 75 (232)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC-----------CCCSTTTTT
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccc-----------cccccCCCC
Confidence 456788999999999999855668889999999999999999999999999998864211 123467899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccC------------CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCc
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDA------------NNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGR 150 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~------------~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~ 150 (434)
.||||+|+..|+.+++++|+++++++.... |..|.||||+|+..|+.+++++|+++|++++..|..|+
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 155 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGN 155 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 999999999999999999999999876322 23799999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCHHHH----HHHHhcCcCccc------ccccCCCCcHHHHHHHcCCHHHHHHHHhcCccc
Q 040611 151 TALHAVAFRNDTEMT----KVLLESSIGTQT------SKVDQQGWRPLHLAAHLGYYDVVKELLKADKSA 210 (434)
Q Consensus 151 t~Lh~A~~~g~~~~v----~~Ll~~~~g~~~------~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 210 (434)
||||+|+..|+.+++ ++|++. |++. +.+|..|+||||+|+..|+.+++++|+++++..
T Consensus 156 t~L~~A~~~~~~~~~~~i~~~Ll~~--g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 156 TVLHILILQPNKTFACQMYNLLLSY--DGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp CHHHHHHTCSCHHHHHHHHHHHHHT--TCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHcCChHHHHHHHHHHHhc--CCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 999999999999988 999998 5665 689999999999999999999999999988665
No 44
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.7e-32 Score=262.40 Aligned_cols=227 Identities=18% Similarity=0.125 Sum_probs=191.5
Q ss_pred ccccCCcHHHHHHHHHhcCCcc--------------------------------ccCcCCCCChHHHHHHHcCCHHHHHH
Q 040611 4 FKKQSSSLEHFVTDILEMSPGL--------------------------------LLKANTKGETLLHIAGRHGHVDIVKD 51 (434)
Q Consensus 4 ~~a~~~~~~~~v~~ll~~~~~~--------------------------------l~~~~~~g~TpLh~Aa~~g~~~~v~~ 51 (434)
..|+..|+.++|+.|++++.+. ++.+|..|.||||+|+..|+.+++++
T Consensus 64 h~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ 143 (337)
T 4g8k_A 64 HNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 143 (337)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHH
Confidence 4577788999999999876542 45678889999999999999999999
Q ss_pred HHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCcHHHHHHHcCC--
Q 040611 52 LIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKE-DPSLPYDANNAGETPLYLAAERGY-- 128 (434)
Q Consensus 52 Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpLh~A~~~g~-- 128 (434)
|+++|++++...... ......+..|.||||+|++.|+.+++++|+++ +.+++ .+|..|.||+|.++..++
T Consensus 144 ll~~ga~~~~~~~~~------~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n-~~d~~g~t~l~~~~~~~~~~ 216 (337)
T 4g8k_A 144 LYKRGANVNLRRKTK------EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDS 216 (337)
T ss_dssp HHHTTCCTTCCCCCC-----------CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHHSCTT
T ss_pred HHHcCCCcchhhccc------cccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC-ccCCCCCcHHHHHHHHcCcc
Confidence 999999876543221 12345678899999999999999999999975 66654 789999999998887654
Q ss_pred --HHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 040611 129 --KDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKA 206 (434)
Q Consensus 129 --~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 206 (434)
.+++++|+++|++++.+|..|+||||.|+..|+.++++.|++.. +.+++.+|.+|+||||+|++.|+.+++++|+++
T Consensus 217 ~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~-~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 217 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE-HIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp THHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred cHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc-CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 45889999999999999999999999999999999999999865 589999999999999999999999999999999
Q ss_pred CcccccccccCCCcHHHHHHHhCCcccccc--CCCccccc
Q 040611 207 DKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIED 244 (434)
Q Consensus 207 ~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~ 244 (434)
|+++ ++.+|||+|++.|+.+++++ ..|+++|.
T Consensus 296 GAd~------n~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 296 GAST------DCGDLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp SCSS------TTCCHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred CCCC------CCCCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 9865 35579999999999999987 45555543
No 45
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5.5e-34 Score=260.05 Aligned_cols=208 Identities=20% Similarity=0.249 Sum_probs=182.6
Q ss_pred cccccCCcHHHHHHHHHhcCCc---cccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhcccc
Q 040611 3 TFKKQSSSLEHFVTDILEMSPG---LLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTN 79 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~---~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (434)
+..|+..|+.+++++|++..+. .++.+|..|.||||+|+..|+.+++++|+++|++++ ..|
T Consensus 12 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------------~~~ 75 (236)
T 1ikn_D 12 LHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE----------------LRD 75 (236)
T ss_dssp THHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC----------------CCC
T ss_pred hHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------------CcC
Confidence 3456777888888889887664 478889999999999999999999999999998865 478
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCC-----CccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCchHH
Q 040611 80 EAKDKALHEAVRYNRVEVVKMVTKEDPSL-----PYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGP-MGRTAL 153 (434)
Q Consensus 80 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~-----~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L 153 (434)
..|.||||+|+..|+.+++++|++.+++. ....+..|.||||+|+..|+.+++++|++.|++++..+. .|.|||
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL 155 (236)
T 1ikn_D 76 FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTAL 155 (236)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Confidence 89999999999999999999999998642 346788899999999999999999999999999999987 999999
Q ss_pred HHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccc-cccccCCCcHHHHHHHh
Q 040611 154 HAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAA-YKADNEGKIPLHLAAVF 228 (434)
Q Consensus 154 h~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~-~~~d~~g~tpLh~A~~~ 228 (434)
|+|+..|+.+++++|+++ |++++.+|..|+||||+|+..|+.+++++|+++|++.. ...+.+|.||.+.+...
T Consensus 156 ~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 156 HLAVDLQNPDLVSLLLKC--GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp HHHHHTTCHHHHHHHHTT--TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred HHHHHcCCHHHHHHHHHc--CCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 999999999999999999 89999999999999999999999999999999998764 35688899988766543
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.5e-31 Score=241.50 Aligned_cols=189 Identities=18% Similarity=0.116 Sum_probs=175.3
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.++.. ++..+..|
T Consensus 29 L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---------------~~~~~~~g 92 (223)
T 2f8y_A 29 LHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD---------------LDARMHDG 92 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSC---------------TTCCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------cccCCCCC
Confidence 3467888999999999999877 6778999999999999999999999999988631 23578899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCH
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDT 162 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~ 162 (434)
.||||+|+..|+.+++++|++.++++. ..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||.|+..|+.
T Consensus 93 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 171 (223)
T 2f8y_A 93 TTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY 171 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcHHHHHHHhCcHHHHHHHHHcCCCCc-CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCH
Confidence 999999999999999999999999866 6889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCccc
Q 040611 163 EMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSA 210 (434)
Q Consensus 163 ~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 210 (434)
+++++|+++ |++++.+|..|+||||+|+..++.+++++|++++...
T Consensus 172 ~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 172 ETAKVLLDH--FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp HHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred HHHHHHHHc--CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 999999999 8899999999999999999999999999999988754
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.1e-32 Score=258.94 Aligned_cols=203 Identities=19% Similarity=0.178 Sum_probs=180.9
Q ss_pred cccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAK 82 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 82 (434)
+..|+..|+.++++.|++.+.+. +.. +|+||||+|+..|+.+++++|+++|++++ .+|..|
T Consensus 35 L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------------~~d~~g 95 (285)
T 3kea_A 35 SYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFSGLDDS----------------QFDDKG 95 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTT----------------CCCTTS
T ss_pred HHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------------CcCCCC
Confidence 35677889999999999998774 444 59999999999999999999999999865 478899
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCC-CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCC
Q 040611 83 DKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAG-ETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRND 161 (434)
Q Consensus 83 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g-~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~ 161 (434)
.||||+|+..|+.+++++|+++++++. ..|..| .||||+|+..|+.+++++|++.|++.... ..|.||||.|+..|+
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~ 173 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLM-FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGH 173 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGG-GCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTC
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcCh
Confidence 999999999999999999999999865 678888 89999999999999999999999776322 389999999999999
Q ss_pred HHHHHHHHhcCcCcccccccCCCCcH-HHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 162 TEMTKVLLESSIGTQTSKVDQQGWRP-LHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 162 ~~~v~~Ll~~~~g~~~~~~d~~G~Tp-Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
.+++++|+++ |++++.+|..|+|| ||+|+..|+.+++++|+++|+++ +.+| +.|+..|+.++++.
T Consensus 174 ~~~v~~Ll~~--gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~-~~~~-------~~a~~~~~~~iv~~ 239 (285)
T 3kea_A 174 VDMMILLLDY--MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINI-YSAN-------LENVLLDDAEIAKM 239 (285)
T ss_dssp HHHHHHHHHH--HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCS-TTTT-------GGGGTTTCHHHHHH
T ss_pred HHHHHHHHHc--CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-------hhhhhcCCHHHHHH
Confidence 9999999999 89999999999998 99999999999999999999887 3434 35677888888887
No 48
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=6.4e-33 Score=265.84 Aligned_cols=195 Identities=16% Similarity=0.151 Sum_probs=159.4
Q ss_pred cCCcHHHHHHHHHhcCCccccC-cCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChH
Q 040611 7 QSSSLEHFVTDILEMSPGLLLK-ANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKA 85 (434)
Q Consensus 7 ~~~~~~~~v~~ll~~~~~~l~~-~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~ 85 (434)
..++..++++.+++.+.+ ++. +|.+|+||||+||..|+.++|++|+++|++++ .+|..|.||
T Consensus 105 ~~~~~~~~~~~l~~~g~d-vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n----------------~~d~~g~Tp 167 (327)
T 1sw6_A 105 FDSLLQEVNDAFPNTQLN-LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL----------------YGDNMGESC 167 (327)
T ss_dssp HHHHHHHHHHHCTTSCCC-SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------BCCTTCCCH
T ss_pred HHhhHHHHHHHHHhcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC----------------CcCCCCCCH
Confidence 344556777777777666 555 89999999999999999999999999999865 478999999
Q ss_pred HHHHHHcCC---HHHHHHHHhcCCCCCccCCCCCCcHHHHHHH----cCCHHHHHHHHhc--------------------
Q 040611 86 LHEAVRYNR---VEVVKMVTKEDPSLPYDANNAGETPLYLAAE----RGYKDVMQDIFLT-------------------- 138 (434)
Q Consensus 86 Lh~Aa~~g~---~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~----~g~~~~v~~Ll~~-------------------- 138 (434)
||+|+..|+ .++++.|++.+......+|..|+||||+|+. .|+.+++++|++.
T Consensus 168 Lh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~ 247 (327)
T 1sw6_A 168 LVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEK 247 (327)
T ss_dssp HHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----
T ss_pred HHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcc
Confidence 999999998 6888888887633345789999999999999 8999999999987
Q ss_pred CCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCC
Q 040611 139 CKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEG 218 (434)
Q Consensus 139 ~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g 218 (434)
|++++..+..|.||||.|+. +++|+++ +++.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|
T Consensus 248 g~~~~~~~~~g~t~L~~a~~------~~~Ll~~----~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~-~~~d~~G 316 (327)
T 1sw6_A 248 ESKPNDKNGERKDSILENLD------LKWIIAN----MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP-FIANKSG 316 (327)
T ss_dssp ------------CHHHHHCS------HHHHHHH----TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred cCCcccccccCCChhHHHHH------HHHHHHh----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCC
Confidence 88899999999999999985 8888876 47899999999999999999999999999999987 6779999
Q ss_pred CcHHHHHHHhC
Q 040611 219 KIPLHLAAVFG 229 (434)
Q Consensus 219 ~tpLh~A~~~g 229 (434)
+||||+|+++|
T Consensus 317 ~TpL~~A~~~g 327 (327)
T 1sw6_A 317 LRPVDFGAGLE 327 (327)
T ss_dssp CCGGGGTCC--
T ss_pred CCHHHHHHhcC
Confidence 99999998765
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=2e-32 Score=255.34 Aligned_cols=209 Identities=22% Similarity=0.267 Sum_probs=167.8
Q ss_pred cccccCCcHHHHHHHHHhc----CCccc---cCcCCCCChHHHHHHHc---CCHHHHHHHHHhcCCCCCCChhhHHHHHH
Q 040611 3 TFKKQSSSLEHFVTDILEM----SPGLL---LKANTKGETLLHIAGRH---GHVDIVKDLIAECKKPHQNDPEKVIEAAT 72 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~----~~~~l---~~~~~~g~TpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 72 (434)
++.|+..|+.++++.|++. +.++. ...|..|+||||+|+.. |+.+++++|++.|++.+. ..
T Consensus 17 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~---------~~ 87 (273)
T 2pnn_A 17 IFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS---------LK 87 (273)
T ss_dssp HHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC---------HH
T ss_pred HHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc---------hh
Confidence 4567888899988888863 33321 14588999999999987 999999999999876432 11
Q ss_pred Hhhc----cccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCC--------------CCCcHHHHHHHcCCHHHHHH
Q 040611 73 LMLG----MTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANN--------------AGETPLYLAAERGYKDVMQD 134 (434)
Q Consensus 73 ~~l~----~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~--------------~g~tpLh~A~~~g~~~~v~~ 134 (434)
..++ ..|..|.||||+|+..|+.+++++|++++++++ ..+. .|.||||+|+..|+.+++++
T Consensus 88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-ccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 1122 256799999999999999999999999999876 4444 79999999999999999999
Q ss_pred HHh---cCCCCCCCCCCCchHHHHHHhcCC---------HHHHHHHHhcCcCcccc-------cccCCCCcHHHHHHHcC
Q 040611 135 IFL---TCKSPAGHGPMGRTALHAVAFRND---------TEMTKVLLESSIGTQTS-------KVDQQGWRPLHLAAHLG 195 (434)
Q Consensus 135 Ll~---~~~~~~~~~~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~g~~~~-------~~d~~G~TpLh~A~~~g 195 (434)
|++ .|++++.+|.+|+||||+|+..|+ .+++++|+++ |++++ .+|.+|+||||+|+..|
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~--ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL--GAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH--HHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh--hhhcccccccccccCCCCCCHHHHHHHhC
Confidence 999 899999999999999999999988 7999999999 78886 48999999999999999
Q ss_pred CHHHHHHHHhcCcccccccccCCCcHHH
Q 040611 196 YYDVVKELLKADKSAAYKADNEGKIPLH 223 (434)
Q Consensus 196 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 223 (434)
+.+++++|+++|+.........+.+|-|
T Consensus 245 ~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 245 KIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp CHHHHHHHHHHHTC--------------
T ss_pred hHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 9999999999998554555666666543
No 50
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.7e-32 Score=252.43 Aligned_cols=193 Identities=18% Similarity=0.168 Sum_probs=167.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHH----hcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHH---HcCCHHHHHHHH
Q 040611 30 NTKGETLLHIAGRHGHVDIVKDLIA----ECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAV---RYNRVEVVKMVT 102 (434)
Q Consensus 30 ~~~g~TpLh~Aa~~g~~~~v~~Ll~----~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa---~~g~~~~v~~Ll 102 (434)
+..|+||||.|++.|+.+.++.|++ .+.+.+..+ ...|..|.||||+|+ +.|+.+++++|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~------------~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll 69 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEE------------FREPSTGKTCLPKALLNLSAGRNDTIPILL 69 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGG------------GSCTTTCCCHHHHHHTSCBTTBCTHHHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhh------------hhccCCCCcHHHHHHHHhhcCCHHHHHHHH
Confidence 5679999999999999996555554 887765411 124578999999999 779999999999
Q ss_pred hcCCCC----------CccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC--------------CCCchHHHHHHh
Q 040611 103 KEDPSL----------PYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHG--------------PMGRTALHAVAF 158 (434)
Q Consensus 103 ~~~~~~----------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~--------------~~g~t~Lh~A~~ 158 (434)
+.+++. ....|..|.||||+|+..|+.+++++|++.|++++..+ ..|+||||+|+.
T Consensus 70 ~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~ 149 (260)
T 3jxi_A 70 DIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAAC 149 (260)
T ss_dssp HHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHH
T ss_pred HhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHH
Confidence 986432 12345689999999999999999999999999999888 689999999999
Q ss_pred cCCHHHHHHHHh---cCcCcccccccCCCCcHHHHHHHcCC---------HHHHHHHHhcCcccc------cccccCCCc
Q 040611 159 RNDTEMTKVLLE---SSIGTQTSKVDQQGWRPLHLAAHLGY---------YDVVKELLKADKSAA------YKADNEGKI 220 (434)
Q Consensus 159 ~g~~~~v~~Ll~---~~~g~~~~~~d~~G~TpLh~A~~~g~---------~~iv~~Ll~~~~~~~------~~~d~~g~t 220 (434)
.|+.+++++|++ . |++++.+|.+|+||||+|+..++ .+++++|+++|++.. +.+|.+|+|
T Consensus 150 ~g~~~~v~~Ll~~~~~--ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~t 227 (260)
T 3jxi_A 150 TNQPHIVHYLTENGHK--QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLS 227 (260)
T ss_dssp TTCHHHHHHHHHCSSC--CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCC
T ss_pred cCCHHHHHHHHhcccc--CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCC
Confidence 999999999999 6 89999999999999999999888 799999999988773 467999999
Q ss_pred HHHHHHHhCCcccccc
Q 040611 221 PLHLAAVFGNGERNEQ 236 (434)
Q Consensus 221 pLh~A~~~g~~~~~~~ 236 (434)
|||+|++.|+.++++.
T Consensus 228 pL~~A~~~g~~~~v~~ 243 (260)
T 3jxi_A 228 PLMMAAKTGKIGIFQH 243 (260)
T ss_dssp HHHHHHHTTCHHHHHH
T ss_pred HHHHHHHcCCHHHHHH
Confidence 9999999999999876
No 51
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=2.6e-31 Score=234.46 Aligned_cols=165 Identities=21% Similarity=0.221 Sum_probs=155.5
Q ss_pred ccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHh
Q 040611 24 GLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTK 103 (434)
Q Consensus 24 ~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~ 103 (434)
.+++.+|..|+||||+|+..|+.+++++|++.|.+++ ..|..|.||||+|+..|+.+++++|++
T Consensus 26 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 89 (192)
T 2rfm_A 26 FLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLE----------------DKDIEGSTALIWAVKNNRLGIAEKLLS 89 (192)
T ss_dssp HHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTT----------------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccc----------------cccccCccHHHHHHHcCCHHHHHHHHH
Confidence 3467789999999999999999999999999998754 478889999999999999999999999
Q ss_pred cCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCC
Q 040611 104 EDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQ 183 (434)
Q Consensus 104 ~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~ 183 (434)
.++++. ..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++ |++++.+|..
T Consensus 90 ~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~ 166 (192)
T 2rfm_A 90 KGSNVN-TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL--GADISARDLT 166 (192)
T ss_dssp HTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTT
T ss_pred CCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCC
Confidence 999865 7889999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcC
Q 040611 184 GWRPLHLAAHLGYYDVVKELLKAD 207 (434)
Q Consensus 184 G~TpLh~A~~~g~~~iv~~Ll~~~ 207 (434)
|+||||+|+..|+.+++++|++.+
T Consensus 167 g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 167 GLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999864
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=3.5e-31 Score=228.70 Aligned_cols=156 Identities=31% Similarity=0.415 Sum_probs=144.7
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHH
Q 040611 84 KALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTE 163 (434)
Q Consensus 84 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~ 163 (434)
++|+.||+.|+.++|+.|++.|++++ .+|..|.||||+|+..|+.+++++|++.|++++.+|.+|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn-~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVN-ASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 47999999999999999999999976 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCcc
Q 040611 164 MTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTS 241 (434)
Q Consensus 164 ~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~ 241 (434)
++++|+++ |+++|.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|++|+||||+|+++|+.+++++ ..|++
T Consensus 85 ~v~~Ll~~--gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 85 VVKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp HHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred HHHHHHHC--cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 99999999 8999999999999999999999999999999999987 5679999999999999999999987 56665
Q ss_pred cc
Q 040611 242 IE 243 (434)
Q Consensus 242 ~~ 243 (434)
++
T Consensus 162 ie 163 (169)
T 4gpm_A 162 LE 163 (169)
T ss_dssp --
T ss_pred cC
Confidence 54
No 53
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=9.6e-32 Score=248.26 Aligned_cols=199 Identities=25% Similarity=0.269 Sum_probs=169.0
Q ss_pred cccccCCcHHH----HHHHHHhcCCccccC----cCCCCChHHHHHHHc---CCHHHHHHHHHhcCCCCCCChhhHHHHH
Q 040611 3 TFKKQSSSLEH----FVTDILEMSPGLLLK----ANTKGETLLHIAGRH---GHVDIVKDLIAECKKPHQNDPEKVIEAA 71 (434)
Q Consensus 3 ~~~a~~~~~~~----~v~~ll~~~~~~l~~----~~~~g~TpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 71 (434)
++.|+..|+.+ +++++++.+.+ ++. +|..|+||||+|+.. |+.+++++|++.|++.+..+.. .
T Consensus 6 L~~A~~~g~~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~-----~ 79 (256)
T 2etb_A 6 LFSVVSRGVPEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL-----V 79 (256)
T ss_dssp HHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG-----G
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh-----c
Confidence 34566777776 55666667776 454 799999999999999 9999999999999876532200 0
Q ss_pred HHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC-------------CCcHHHHHHHcCCHHHHHHHHh-
Q 040611 72 TLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNA-------------GETPLYLAAERGYKDVMQDIFL- 137 (434)
Q Consensus 72 ~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~-------------g~tpLh~A~~~g~~~~v~~Ll~- 137 (434)
.......|..|.||||+|+..|+.+++++|++++++++ ..|.. |.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 00012245789999999999999999999999999876 45554 9999999999999999999999
Q ss_pred --cCCCCCCCCCCCchHHHHHHh--cCCHH-------HHHHHHhcCcCccc-------ccccCCCCcHHHHHHHcCCHHH
Q 040611 138 --TCKSPAGHGPMGRTALHAVAF--RNDTE-------MTKVLLESSIGTQT-------SKVDQQGWRPLHLAAHLGYYDV 199 (434)
Q Consensus 138 --~~~~~~~~~~~g~t~Lh~A~~--~g~~~-------~v~~Ll~~~~g~~~-------~~~d~~G~TpLh~A~~~g~~~i 199 (434)
.|++++..|.+|+||||+|+. .++.+ ++++|+++ |+++ +.+|.+|+||||+|+..|+.++
T Consensus 159 ~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~--ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 159 PHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM--GARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH--HHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred cccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc--CCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 899999999999999999999 78888 99999999 8888 8999999999999999999999
Q ss_pred HHHHHhcCccc
Q 040611 200 VKELLKADKSA 210 (434)
Q Consensus 200 v~~Ll~~~~~~ 210 (434)
+++|++++++.
T Consensus 237 v~~Ll~~g~~~ 247 (256)
T 2etb_A 237 FRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhCCCCC
Confidence 99999988765
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1e-30 Score=226.42 Aligned_cols=170 Identities=19% Similarity=0.236 Sum_probs=151.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccC
Q 040611 33 GETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDA 112 (434)
Q Consensus 33 g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 112 (434)
+.||||.|+..|+.++++.|++.+.+ .++..|..|.||||+|+..|+.+++++|++.++++. ..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~---------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~ 65 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN---------------LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-IL 65 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG---------------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc---------------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch-hh
Confidence 56899999999999999999998764 245678999999999999999999999999999865 68
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHH
Q 040611 113 NNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAA 192 (434)
Q Consensus 113 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~ 192 (434)
|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|+
T Consensus 66 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~ 143 (172)
T 3v30_A 66 AKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR--GADLTTEADSGYTPMDLAV 143 (172)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH
T ss_pred cccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccccCCCcH
Q 040611 193 HLGYYDVVKELLKADKSAAYKADNEGKIP 221 (434)
Q Consensus 193 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp 221 (434)
..|+.+++++|++++++. ...+..|.||
T Consensus 144 ~~~~~~~~~~L~~~~~~~-~~~~~~~~~p 171 (172)
T 3v30_A 144 ALGYRKVQQVIENHILKL-FQSNLVPADP 171 (172)
T ss_dssp HHTCHHHHHHHHHHHHHH-SCC-------
T ss_pred HhCcHHHHHHHHHHHHHH-hcccCCCCCC
Confidence 999999999999998877 4457777776
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=9.6e-32 Score=248.76 Aligned_cols=200 Identities=21% Similarity=0.231 Sum_probs=167.9
Q ss_pred cccccCCcHHHHHHHHHh----cCCccccCc----CCCCChHHHHHH---HcCCHHHHHHHHHhcCCCCCCChhhHHHHH
Q 040611 3 TFKKQSSSLEHFVTDILE----MSPGLLLKA----NTKGETLLHIAG---RHGHVDIVKDLIAECKKPHQNDPEKVIEAA 71 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~----~~~~~l~~~----~~~g~TpLh~Aa---~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 71 (434)
++.|+..|+.+.++.|++ .+.++ +.. |..|+||||+|+ +.|+.+++++|++.|++.... . ...
T Consensus 9 L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~--~---~~~ 82 (260)
T 3jxi_A 9 LFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM--R---EFI 82 (260)
T ss_dssp HHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH--H---HHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch--H---hhh
Confidence 466778888886655555 66663 433 377999999999 779999999999998764320 0 001
Q ss_pred HHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCC--------------CCCCcHHHHHHHcCCHHHHHHHHh
Q 040611 72 TLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDAN--------------NAGETPLYLAAERGYKDVMQDIFL 137 (434)
Q Consensus 72 ~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~--------------~~g~tpLh~A~~~g~~~~v~~Ll~ 137 (434)
...+...|..|.||||+|+..|+.+++++|++.+++++ ..+ ..|.||||+|+..|+.+++++|++
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 11234456699999999999999999999999999876 455 689999999999999999999999
Q ss_pred ---cCCCCCCCCCCCchHHHHHHhcCC---------HHHHHHHHhcCcCccc-------ccccCCCCcHHHHHHHcCCHH
Q 040611 138 ---TCKSPAGHGPMGRTALHAVAFRND---------TEMTKVLLESSIGTQT-------SKVDQQGWRPLHLAAHLGYYD 198 (434)
Q Consensus 138 ---~~~~~~~~~~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~g~~~-------~~~d~~G~TpLh~A~~~g~~~ 198 (434)
.|++++..|..|+||||+|+..++ .+++++|+++ |+++ +.+|.+|+||||+|++.|+.+
T Consensus 162 ~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~--ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 239 (260)
T 3jxi_A 162 NGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK--CAKLFPDTNLEALLNNDGLSPLMMAAKTGKIG 239 (260)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH--HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred ccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh--CcccccccchhhcccCCCCCHHHHHHHcCCHH
Confidence 899999999999999999998887 7999999999 7888 779999999999999999999
Q ss_pred HHHHHHhcCcccc
Q 040611 199 VVKELLKADKSAA 211 (434)
Q Consensus 199 iv~~Ll~~~~~~~ 211 (434)
++++|++++++..
T Consensus 240 ~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 240 IFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcc
Confidence 9999999887653
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=3.1e-30 Score=222.23 Aligned_cols=160 Identities=21% Similarity=0.232 Sum_probs=151.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCcc
Q 040611 32 KGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYD 111 (434)
Q Consensus 32 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~ 111 (434)
.|.||||.|+..|+.+++++|++.+.+++ ..|..|.||||+|+..|+.+++++|++.++++. .
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~ 64 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVIN----------------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-L 64 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTT----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcC----------------CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-C
Confidence 58999999999999999999999987754 478899999999999999999999999998865 6
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHH
Q 040611 112 ANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLA 191 (434)
Q Consensus 112 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A 191 (434)
.|..|.||||+|+..|+.+++++|++.|++++..|..|.||||.|+..|+.+++++|+++ |.+++.+|.+|+||||+|
T Consensus 65 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A 142 (167)
T 3v31_A 65 LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES--GADPTIETDSGYNSMDLA 142 (167)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred HHcCCHHHHHHHHhcCccc
Q 040611 192 AHLGYYDVVKELLKADKSA 210 (434)
Q Consensus 192 ~~~g~~~iv~~Ll~~~~~~ 210 (434)
+..|+.+++++|++++...
T Consensus 143 ~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 143 VALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHTCHHHHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHHHHHH
Confidence 9999999999999987655
No 57
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.4e-32 Score=249.77 Aligned_cols=200 Identities=16% Similarity=0.132 Sum_probs=170.8
Q ss_pred HHHHHhcCCcc--ccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHc
Q 040611 15 VTDILEMSPGL--LLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRY 92 (434)
Q Consensus 15 v~~ll~~~~~~--l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~ 92 (434)
++.|++.+.+. .+..+.+|.||||.|+..|+.+++++|++.|++++ ..|..|.||||+|+..
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~d~~g~tpLh~A~~~ 64 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS----------------QPNEEGITALHNAICG 64 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT----------------CCCTTSCCHHHHHHHT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC----------------CCCCCCCCHHHHHHHc
Confidence 35566665543 34566778999999999999999999999998765 4788999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCchHHHHH--HhcCCHHHHHHHH
Q 040611 93 NRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHG-PMGRTALHAV--AFRNDTEMTKVLL 169 (434)
Q Consensus 93 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~Lh~A--~~~g~~~~v~~Ll 169 (434)
|+.+++++|++.+++++ .+|..|.||||+|+..|+.+++++|++.|++++..+ .+|+||||+| +..|+.+++++|+
T Consensus 65 g~~~~v~~Ll~~ga~~n-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll 143 (229)
T 2vge_A 65 ANYSIVDFLITAGANVN-SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLA 143 (229)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHH
Confidence 99999999999999876 788999999999999999999999999999999886 6999999999 9999999999999
Q ss_pred hcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCccc-ccccccCCCcHHHHHHHhCCcccccc
Q 040611 170 ESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSA-AYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 170 ~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~-~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+. |++++.+|..|.||+|.++..+. .++|++.+++. .+.+|.+|+||||+|+..|+.++++.
T Consensus 144 ~~--ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 144 DV--EQSMGLMNSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp HH--HHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred Hc--CCCcccccCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 99 89999999999999997665543 36778888774 36679999999999999999999875
No 58
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=8.1e-30 Score=220.26 Aligned_cols=162 Identities=24% Similarity=0.291 Sum_probs=148.3
Q ss_pred cCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCC
Q 040611 27 LKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDP 106 (434)
Q Consensus 27 ~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~ 106 (434)
......+.||||.||+.|+.+++++|+++|.+++ ..|..|.||||+|+..|+.+++++|++++.
T Consensus 8 ~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 71 (169)
T 2y1l_E 8 HHHGSDLGKKLLEAARAGRDDEVRILMANGADVN----------------AEDASGWTPLHLAAFNGHLEIVEVLLKNGA 71 (169)
T ss_dssp -----CHHHHHHHHHHHTCHHHHHHHHHTTCCTT----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ccCCCcccchHHHHHHcCCHHHHHHHHHCCCCCC----------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3346678899999999999999999999998755 478899999999999999999999999998
Q ss_pred CCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCc
Q 040611 107 SLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWR 186 (434)
Q Consensus 107 ~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~T 186 (434)
++. ..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||.|+..|+.+++++|+++ |.+++.+|..|+|
T Consensus 72 ~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t 148 (169)
T 2y1l_E 72 DVN-AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN--GADVNAQDKFGKT 148 (169)
T ss_dssp CTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCC
T ss_pred CCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCC
Confidence 865 6789999999999999999999999999999999999999999999999999999999999 8899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcC
Q 040611 187 PLHLAAHLGYYDVVKELLKAD 207 (434)
Q Consensus 187 pLh~A~~~g~~~iv~~Ll~~~ 207 (434)
|||+|+..|+.+++++|++.|
T Consensus 149 ~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 149 AFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999864
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=243.25 Aligned_cols=186 Identities=20% Similarity=0.214 Sum_probs=102.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccC
Q 040611 33 GETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDA 112 (434)
Q Consensus 33 g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 112 (434)
+.+++|.|+..|+.+.++.+++.+.+. .++..|..|+||||+|+..|+.+++++|++.++......
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~--------------~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~ 141 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDY--------------VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQ 141 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHH--------------HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhh--------------cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCC
Confidence 445555555555555555555544321 133455555555555555555555555555555223345
Q ss_pred CCCCCcHHHHHH-----HcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcH
Q 040611 113 NNAGETPLYLAA-----ERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRP 187 (434)
Q Consensus 113 ~~~g~tpLh~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~Tp 187 (434)
|..|.||||+|+ ..++.++++.|++.|.+.+..+..|+||||+|+..|+.+++++|++. |++++.+|.+|+||
T Consensus 142 ~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~--gad~n~~d~~G~Tp 219 (276)
T 4hbd_A 142 NRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC--EADVNVQDDDGSTA 219 (276)
T ss_dssp CTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCH
T ss_pred CCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCH
Confidence 555555555555 34555555555555555555555555555555555555555555555 55555555555555
Q ss_pred HHHHHHcCCHHHHHHHHh-cCcccccccccCCCcHHHHHHHhCCccccc
Q 040611 188 LHLAAHLGYYDVVKELLK-ADKSAAYKADNEGKIPLHLAAVFGNGERNE 235 (434)
Q Consensus 188 Lh~A~~~g~~~iv~~Ll~-~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~ 235 (434)
||+|+..|+.+++++|++ .|+++ +.+|.+|+||||+|+..|+.++++
T Consensus 220 Lh~A~~~g~~~iv~~Ll~~~gad~-~~~d~~g~TpL~~A~~~g~~~iv~ 267 (276)
T 4hbd_A 220 LMCACEHGHKEIAGLLLAVPSCDI-SLTDRDGSTALMVALDAGQSEIAS 267 (276)
T ss_dssp HHHHHHHTCHHHHHHHHTSTTCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCC-cCcCCCCCCHHHHHHHcCCHHHHH
Confidence 555555555555555555 44443 344555555555555555555544
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=4e-30 Score=220.19 Aligned_cols=159 Identities=16% Similarity=0.146 Sum_probs=146.2
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCc
Q 040611 31 TKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPY 110 (434)
Q Consensus 31 ~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~ 110 (434)
....||||.|+..|+.+++++|+++|.+++ ..|..|.||||+|+. |+.+++++|++.+++++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~----------------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~- 64 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVN----------------AQNGFGRTALQVMKL-GNPEIARRLLLRGANPD- 64 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTT----------------CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCcc----------------ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-
Confidence 456799999999999999999999988754 478899999999999 99999999999998866
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcc-cccccCCCCcHHH
Q 040611 111 DANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQ-TSKVDQQGWRPLH 189 (434)
Q Consensus 111 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~-~~~~d~~G~TpLh 189 (434)
.+|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++ |.+ ++.+|..|+||||
T Consensus 65 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~~g~t~l~ 142 (162)
T 1ihb_A 65 LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH--TASNVGHRNHKGDTACD 142 (162)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH--SCCCTTCCCTTSCCHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--cCCCCCCcCCCCCcHHH
Confidence 6889999999999999999999999999999999999999999999999999999999999 555 6999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCcc
Q 040611 190 LAAHLGYYDVVKELLKADKS 209 (434)
Q Consensus 190 ~A~~~g~~~iv~~Ll~~~~~ 209 (434)
+|+..|+.+++++|+++|++
T Consensus 143 ~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 143 LARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHTTCHHHHHHHHHTC--
T ss_pred HHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999874
No 61
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=6.9e-31 Score=245.58 Aligned_cols=153 Identities=23% Similarity=0.266 Sum_probs=100.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcC-CCCCCChhhHHHHHHHhhccccCCCChHHHHHH-----HcCCHHHHHHHHhcCCCC
Q 040611 35 TLLHIAGRHGHVDIVKDLIAECK-KPHQNDPEKVIEAATLMLGMTNEAKDKALHEAV-----RYNRVEVVKMVTKEDPSL 108 (434)
Q Consensus 35 TpLh~Aa~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa-----~~g~~~~v~~Ll~~~~~~ 108 (434)
||||+|+..|+.+++++|++.|+ ++ +..|..|.||||+|+ ..++.++++.|++.+...
T Consensus 113 T~Lh~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~ 176 (276)
T 4hbd_A 113 TALHYSVSHANFPVVQQLLDSGVCKV----------------DKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN 176 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTSCCCT----------------TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCcC----------------CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc
Confidence 66666666666666666666665 32 235666666666666 445666666666666543
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHh-cCcCcccccccCCCCcH
Q 040611 109 PYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLE-SSIGTQTSKVDQQGWRP 187 (434)
Q Consensus 109 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~~~g~~~~~~d~~G~Tp 187 (434)
. ..|..|.||||+|+..|+.+++++|++.|++++..|.+|+||||+|+..|+.+++++|++ . |++++.+|.+|+||
T Consensus 177 ~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~--gad~~~~d~~g~Tp 253 (276)
T 4hbd_A 177 A-KASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVP--SCDISLTDRDGSTA 253 (276)
T ss_dssp C-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTST--TCCTTCCCTTSCCH
T ss_pred c-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC--CCCCcCcCCCCCCH
Confidence 3 455666666666666666666666666666666666666666666666666666666666 4 56666666666666
Q ss_pred HHHHHHcCCHHHHHHHHhc
Q 040611 188 LHLAAHLGYYDVVKELLKA 206 (434)
Q Consensus 188 Lh~A~~~g~~~iv~~Ll~~ 206 (434)
||+|+..|+.+++++|+++
T Consensus 254 L~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 254 LMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhc
Confidence 6666666666666666654
No 62
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.8e-29 Score=213.12 Aligned_cols=151 Identities=21% Similarity=0.230 Sum_probs=136.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccC
Q 040611 33 GETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDA 112 (434)
Q Consensus 33 g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 112 (434)
..||||.|++.|+.+++++|++.|.+.+ .|..|.||||+|+..|+.+++++|++.++++. ..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~ 63 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-----------------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD-AR 63 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-----------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-----------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CC
Confidence 4689999999999999999999987643 47789999999999999999999999988865 67
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHH
Q 040611 113 NNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAA 192 (434)
Q Consensus 113 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~ 192 (434)
|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|+
T Consensus 64 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~ 141 (153)
T 1awc_B 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY--GADVHTQSKFCKTAFDISI 141 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999998 7899999999999999999
Q ss_pred HcCCHHHHHHH
Q 040611 193 HLGYYDVVKEL 203 (434)
Q Consensus 193 ~~g~~~iv~~L 203 (434)
..|+.+++++|
T Consensus 142 ~~~~~~i~~~L 152 (153)
T 1awc_B 142 DNGNEDLAEIL 152 (153)
T ss_dssp HTTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999886
No 63
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.5e-29 Score=223.11 Aligned_cols=161 Identities=20% Similarity=0.233 Sum_probs=151.4
Q ss_pred HHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCch
Q 040611 72 TLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRT 151 (434)
Q Consensus 72 ~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t 151 (434)
....+.+|..|.||||+|+..|+.+++++|++.++++. ..|..|.||||+|+..|+.+++++|++.|++++..|..|.|
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 103 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLE-DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT 103 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccc-cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence 34567789999999999999999999999999998865 68889999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCc
Q 040611 152 ALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNG 231 (434)
Q Consensus 152 ~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 231 (434)
|||+|+..|+.+++++|+++ |.+++.+|..|+||||+|+..|+.+++++|+++|++. +.+|..|.||||+|+..|+.
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEH--GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCcH
Confidence 99999999999999999999 8999999999999999999999999999999999887 56799999999999999999
Q ss_pred ccccc
Q 040611 232 ERNEQ 236 (434)
Q Consensus 232 ~~~~~ 236 (434)
++++.
T Consensus 181 ~~v~~ 185 (192)
T 2rfm_A 181 EVIKI 185 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 64
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=1.1e-30 Score=250.28 Aligned_cols=226 Identities=13% Similarity=0.084 Sum_probs=175.6
Q ss_pred ccCCcHHHHHHHHHhcCCcccc-----C-----------cCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHH
Q 040611 6 KQSSSLEHFVTDILEMSPGLLL-----K-----------ANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIE 69 (434)
Q Consensus 6 a~~~~~~~~v~~ll~~~~~~l~-----~-----------~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 69 (434)
.+..|+.++++.|++++.+.-. . ......+.+|.|+..+..++++.|++.|.+++.
T Consensus 54 ~~~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~-------- 125 (327)
T 1sw6_A 54 VNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNI-------- 125 (327)
T ss_dssp CCCHHHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCS--------
T ss_pred cccCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCccc--------
Confidence 3455899999999987644211 0 111123346888888899999999999887653
Q ss_pred HHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCC---HHHHHHHHhcC-CCCCCC
Q 040611 70 AATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGY---KDVMQDIFLTC-KSPAGH 145 (434)
Q Consensus 70 ~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~---~~~v~~Ll~~~-~~~~~~ 145 (434)
.+|..|.||||+|+..|+.+++++|++++++++ .+|..|+||||+|+..|+ .++++.|++.+ ++++..
T Consensus 126 -------~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~ 197 (327)
T 1sw6_A 126 -------PVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 197 (327)
T ss_dssp -------CCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEE
T ss_pred -------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCC
Confidence 168999999999999999999999999999976 789999999999999998 78888888887 778889
Q ss_pred CCCCchHHHHHHh----cCCHHHHHHHHhcCc------------------CcccccccCCCCcHHHHHHHcCCHHHHHHH
Q 040611 146 GPMGRTALHAVAF----RNDTEMTKVLLESSI------------------GTQTSKVDQQGWRPLHLAAHLGYYDVVKEL 203 (434)
Q Consensus 146 ~~~g~t~Lh~A~~----~g~~~~v~~Ll~~~~------------------g~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 203 (434)
|..|+||||+|+. .|+.++++.|++... +.+++.+|..|+||||.|+. +++|
T Consensus 198 d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~L 271 (327)
T 1sw6_A 198 DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWI 271 (327)
T ss_dssp CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHH
T ss_pred CCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHH
Confidence 9999999999999 899999999997632 57889999999999999986 8899
Q ss_pred HhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCcccccch
Q 040611 204 LKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDRKEKSSS 256 (434)
Q Consensus 204 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~t~~~~~ 256 (434)
++++ .+.+|.+|+||||+|+..|+.++++. ..+++++.+|.+|+||.+..
T Consensus 272 l~~~---~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 272 IANM---LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323 (327)
T ss_dssp HHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred HHhC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 9883 46679999999999999999999987 67889999999999997654
No 65
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=2.3e-29 Score=216.33 Aligned_cols=161 Identities=25% Similarity=0.296 Sum_probs=143.9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 040611 29 ANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSL 108 (434)
Q Consensus 29 ~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ 108 (434)
.|.+|+||||.|++.|+.++++.|++.+... ....+..|.||||+|+..|+.+++++|+++++++
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 68 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVN---------------CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV 68 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTT---------------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCC---------------ccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC
Confidence 4678999999999999999999999864421 2346788999999999999999999999999986
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHH
Q 040611 109 PYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPL 188 (434)
Q Consensus 109 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpL 188 (434)
+ .+|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++ |.+++.+|.+|+|||
T Consensus 69 ~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l 145 (165)
T 3twr_A 69 H-AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH--GADPTKKNRDGNTPL 145 (165)
T ss_dssp T-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCTG
T ss_pred C-ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCChh
Confidence 5 7888999999999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCc
Q 040611 189 HLAAHLGYYDVVKELLKADK 208 (434)
Q Consensus 189 h~A~~~g~~~iv~~Ll~~~~ 208 (434)
|+|+. |+.+++++|++.|+
T Consensus 146 ~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 146 DLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp GGSCT-TCHHHHHHHHTC--
T ss_pred HhHhc-CChHHHHHHhhccc
Confidence 99776 89999999998765
No 66
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=7.6e-29 Score=214.58 Aligned_cols=167 Identities=16% Similarity=0.172 Sum_probs=151.2
Q ss_pred ccccccCCcHHHHHHHHHhcCCccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCC
Q 040611 2 STFKKQSSSLEHFVTDILEMSPGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEA 81 (434)
Q Consensus 2 ~~~~a~~~~~~~~v~~ll~~~~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (434)
.+..++..|+.+.++.+++.++..++.+|..|.||||+|+..|+.+++++|+++|++++ ..|..
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------------~~~~~ 68 (172)
T 3v30_A 5 SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH----------------ILAKE 68 (172)
T ss_dssp CHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT----------------CCCTT
T ss_pred hHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch----------------hhccc
Confidence 35678899999999999999999899999999999999999999999999999998865 47889
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCC
Q 040611 82 KDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRND 161 (434)
Q Consensus 82 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~ 161 (434)
|.||||+|+..|+.+++++|++++.+++ .+|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 69 RESALSLASTGGYTDIVGLLLERDVDIN-IYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCc
Confidence 9999999999999999999999999876 788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcCcccccccCCCCcH
Q 040611 162 TEMTKVLLESSIGTQTSKVDQQGWRP 187 (434)
Q Consensus 162 ~~~v~~Ll~~~~g~~~~~~d~~G~Tp 187 (434)
.+++++|+++ +.+...++..|.||
T Consensus 148 ~~~~~~L~~~--~~~~~~~~~~~~~p 171 (172)
T 3v30_A 148 RKVQQVIENH--ILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHH--HHHHSCC-------
T ss_pred HHHHHHHHHH--HHHHhcccCCCCCC
Confidence 9999999999 78888888888887
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=6.9e-29 Score=216.45 Aligned_cols=164 Identities=20% Similarity=0.215 Sum_probs=149.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCc
Q 040611 31 TKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPY 110 (434)
Q Consensus 31 ~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~ 110 (434)
..+.+|||.|+..|+.+++++|++.+... ++..|..|.||||+|+..|+.+++++|++.+.+++
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~- 66 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEND---------------LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN- 66 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccc---------------ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-
Confidence 56889999999999999999999985431 34578999999999999999999999999999876
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHH
Q 040611 111 DANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHL 190 (434)
Q Consensus 111 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~ 190 (434)
..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++ |++++.+|..|+||||+
T Consensus 67 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~ 144 (179)
T 3f6q_A 67 VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN--GALVSICNKYGEMPVDK 144 (179)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSSBCCTTSCCGGGG
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCcchhccCCCCcHHH
Confidence 6889999999999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHcCCHHHHHHHHhcCccccc
Q 040611 191 AAHLGYYDVVKELLKADKSAAY 212 (434)
Q Consensus 191 A~~~g~~~iv~~Ll~~~~~~~~ 212 (434)
|+..++.+++++|++.+++...
T Consensus 145 A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 145 AKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHHHHHHHHHHhhcCccc
Confidence 9999999999999999988743
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.3e-28 Score=212.09 Aligned_cols=152 Identities=22% Similarity=0.286 Sum_probs=144.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC
Q 040611 81 AKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRN 160 (434)
Q Consensus 81 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g 160 (434)
.|.||||.|+..|+.++++.|++.+++++ ..|..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVIN-HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcC-CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 57899999999999999999999998855 78999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 161 DTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 161 ~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+.+++++|++. |.+++.+|..|+||||+|+..|+.+++++|+++++++ +.+|.+|.||||+|+..|+.++++.
T Consensus 81 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (167)
T 3v31_A 81 YTDIVKMLLDC--GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGYRSVQQV 153 (167)
T ss_dssp CHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHC--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 99999999999 8899999999999999999999999999999999887 5679999999999999999998775
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=2.5e-28 Score=207.77 Aligned_cols=155 Identities=21% Similarity=0.259 Sum_probs=141.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCcc
Q 040611 32 KGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYD 111 (434)
Q Consensus 32 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~ 111 (434)
+|.||||.|+..|+.++++.|++. ...+ .+..|..|.||||+ +..|+.+++++|++.+++++ .
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~-~~~~--------------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~-~ 63 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHR-ELVH--------------PDALNRFGKTALQV-MMFGSTAIALELLKQGASPN-V 63 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT-TCCC--------------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT-C
T ss_pred CcchHHHHHHHhCCHHHHHHHHHh-hCcC--------------ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC-C
Confidence 367999999999999999999998 3111 23578899999999 99999999999999999865 7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHH
Q 040611 112 ANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLA 191 (434)
Q Consensus 112 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A 191 (434)
+|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|++. .+++.+|.+|+||||+|
T Consensus 64 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~~g~t~l~~A 140 (156)
T 1bd8_A 64 QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE---SDLHRRDARGLTPLELA 140 (156)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT---SCTTCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc---cCCCCcCCCCCCHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999987 78899999999999999
Q ss_pred HHcCCHHHHHHHHhc
Q 040611 192 AHLGYYDVVKELLKA 206 (434)
Q Consensus 192 ~~~g~~~iv~~Ll~~ 206 (434)
+..|+.+++++|+++
T Consensus 141 ~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 141 LQRGAQDLVDILQGH 155 (156)
T ss_dssp HHSCCHHHHHHHHTT
T ss_pred HHcCcHHHHHHHHhh
Confidence 999999999999874
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-28 Score=208.77 Aligned_cols=150 Identities=23% Similarity=0.274 Sum_probs=141.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCC
Q 040611 82 KDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRND 161 (434)
Q Consensus 82 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~ 161 (434)
..||||.|++.|+.+++++|++.+++.. .|..|.||||+|+..|+.+++++|++.|.+++..+..|+||||.|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 3589999999999999999999998764 68899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 162 TEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 162 ~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
.+++++|+++ |.+++.+|..|+||||+|+..|+.+++++|+++|++. +.+|..|+||||+|+..|+.+++++
T Consensus 80 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 80 ANIVEVLLKH--GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHHHHHHHTT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999 8999999999999999999999999999999999887 5679999999999999999988753
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=8.2e-30 Score=233.12 Aligned_cols=182 Identities=18% Similarity=0.126 Sum_probs=134.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 040611 30 NTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLP 109 (434)
Q Consensus 30 ~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~ 109 (434)
+..|.||||.|++.|+.+.++.|+++|++++. +..|.||||.|+..|+.++++.|++.+++++
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-----------------~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 64 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-----------------NPLPLALLLDSSLEGEFDLVQRIIYEVDDPS 64 (239)
T ss_dssp ----------------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc-----------------CchhhHHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 45799999999999999999999999988642 4678999999999999999999999999765
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCC-cHH
Q 040611 110 YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGW-RPL 188 (434)
Q Consensus 110 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~-TpL 188 (434)
.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++ |++++.+|..|. |||
T Consensus 65 -~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~~~~t~l 141 (239)
T 1ycs_B 65 -LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES--GAAVFAMTYSDMQTAA 141 (239)
T ss_dssp -CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCSSSCCCHH
T ss_pred -CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCcceecCCCCcchH
Confidence 7899999999999999999999999999999999999999999999999999999999999 899999998887 999
Q ss_pred HHH--HHcCCHHHHHHHHhcCccccc--------ccccCCCcHHHHHHHhCCc
Q 040611 189 HLA--AHLGYYDVVKELLKADKSAAY--------KADNEGKIPLHLAAVFGNG 231 (434)
Q Consensus 189 h~A--~~~g~~~iv~~Ll~~~~~~~~--------~~d~~g~tpLh~A~~~g~~ 231 (434)
|+| +..|+.+++++|++.+++... ..|..+.+|++++.+.|..
T Consensus 142 ~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~ 194 (239)
T 1ycs_B 142 DKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDC 194 (239)
T ss_dssp HHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCE
T ss_pred HHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCCE
Confidence 999 788999999999998776532 1256788999988887763
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.1e-28 Score=211.27 Aligned_cols=152 Identities=23% Similarity=0.289 Sum_probs=143.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC
Q 040611 81 AKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRN 160 (434)
Q Consensus 81 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g 160 (434)
...||||.|+..|+.++++.|++++++++ ..|..|.||||+|+. |+.+++++|++.|++++..+..|.||||.|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVN-AQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTT-CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCcc-ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 45689999999999999999999998875 789999999999999 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 161 DTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 161 ~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+.+++++|+++ |.+++.+|.+|+||||+|+..|+.+++++|++++++..+.+|..|+||||+|+..|+.++++.
T Consensus 82 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 155 (162)
T 1ihb_A 82 FLDTLQTLLEF--QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSL 155 (162)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 99999999999 799999999999999999999999999999999998767889999999999999999998875
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=4.4e-28 Score=209.33 Aligned_cols=155 Identities=28% Similarity=0.377 Sum_probs=144.6
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 040611 78 TNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVA 157 (434)
Q Consensus 78 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~ 157 (434)
....+.++||.|++.|+.+++++|++++.+++ ..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||.|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVN-AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 45667899999999999999999999999876 68899999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 158 FRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 158 ~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
..|+.+++++|+++ |.+++.+|.+|+||||+|+..|+.+++++|++++++. +.+|..|.||||+|+..|+.++++.
T Consensus 89 ~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ 164 (169)
T 2y1l_E 89 LFGHLEIVEVLLKN--GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFGKTAFDISIDNGNEDLAEI 164 (169)
T ss_dssp HTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCCHHHHHH
Confidence 99999999999999 8899999999999999999999999999999999887 5679999999999999999988764
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.7e-28 Score=210.82 Aligned_cols=156 Identities=26% Similarity=0.335 Sum_probs=143.5
Q ss_pred cccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHH
Q 040611 77 MTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAV 156 (434)
Q Consensus 77 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A 156 (434)
+.|..|.||||.|++.|+.++++.|++.++......+..|.||||+|+..|+.+++++|++.|.+++..|..|+||||+|
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 35788899999999999999999999977766667888999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 157 AFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 157 ~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+..|+.+++++|+++ |.+++.+|..|+||||+|+..|+.+++++|++++++. +.+|.+|+||||+|.+ ++.+++++
T Consensus 83 ~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~a~~-~~~~i~~~ 158 (165)
T 3twr_A 83 CSYGHYEVAELLVKH--GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNRDGNTPLDLVKD-GDTDIQDL 158 (165)
T ss_dssp HHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCTGGGSCT-TCHHHHHH
T ss_pred HHcCcHHHHHHHHhC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCChhHhHhc-CChHHHHH
Confidence 999999999999999 8999999999999999999999999999999999887 6679999999999876 77777765
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.2e-28 Score=212.20 Aligned_cols=167 Identities=17% Similarity=0.197 Sum_probs=150.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhc
Q 040611 80 EAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFR 159 (434)
Q Consensus 80 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~ 159 (434)
..+.++||.|+..|+.++++.|++.++......|..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 45778999999999999999999997766668899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--C
Q 040611 160 NDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--G 237 (434)
Q Consensus 160 g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~ 237 (434)
|+.+++++|+++ |.+++.+|..|+||||+|+..|+.+++++|+++|++. +.+|.+|.||||+|+..++.++++. .
T Consensus 83 ~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 83 GHRDIVQKLLQY--KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999 8999999999999999999999999999999999887 5679999999999999999988876 5
Q ss_pred CCccccccccCC
Q 040611 238 SNTSIEDKNNND 249 (434)
Q Consensus 238 ~~~~~~~~~~~g 249 (434)
.+++++..+.++
T Consensus 160 ~g~~~~~~~~~~ 171 (179)
T 3f6q_A 160 MGQNLNRIPYKD 171 (179)
T ss_dssp TTCCCSCBCCCC
T ss_pred hhcCcccCCccc
Confidence 555566555443
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.2e-27 Score=203.53 Aligned_cols=150 Identities=25% Similarity=0.285 Sum_probs=139.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCC
Q 040611 82 KDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRND 161 (434)
Q Consensus 82 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~ 161 (434)
+.||||.|+..|+.++++.|++..+......|..|.||||+ +..|+.+++++|++.|++++..|..|.||||.|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 46899999999999999999999433445789999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 162 TEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 162 ~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
.+++++|+++ |.+++.+|.+|+||||+|+..|+.+++++|++. ++. +.+|.+|.||||+|+..|+.++++.
T Consensus 81 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 81 LDTLKVLVEH--GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp HHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred HHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 9999999999 899999999999999999999999999999998 555 6679999999999999999988764
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.3e-28 Score=223.71 Aligned_cols=191 Identities=17% Similarity=0.157 Sum_probs=158.7
Q ss_pred HHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCC
Q 040611 49 VKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGY 128 (434)
Q Consensus 49 v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~ 128 (434)
++.|+++|++++.. +..+..|.||||+|+..|+.+++++|++.+++++ .+|..|.||||+|+..|+
T Consensus 1 v~~ll~~~~~~~~~-------------~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~tpLh~A~~~g~ 66 (229)
T 2vge_A 1 MRSVLRKAGSPRKA-------------RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS-QPNEEGITALHNAICGAN 66 (229)
T ss_dssp ---------CCCCC-------------CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTC
T ss_pred CeehhccCCCCccc-------------cccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCC
Confidence 46788888877642 2457788899999999999999999999999875 689999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCccccccc-CCCCcHHHHH--HHcCCHHHHHHHHh
Q 040611 129 KDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVD-QQGWRPLHLA--AHLGYYDVVKELLK 205 (434)
Q Consensus 129 ~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d-~~G~TpLh~A--~~~g~~~iv~~Ll~ 205 (434)
.+++++|++.|++++..|..|+||||+|+..|+.+++++|++. |++++.+| .+|+||||+| +..|+.+++++|++
T Consensus 67 ~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~ 144 (229)
T 2vge_A 67 YSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQH--GAAIFATTLSDGATAFEKCDPYREGYADCATYLAD 144 (229)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 88999987 6999999999 99999999999999
Q ss_pred cCcccccccccCCCcHHHHHHHhCCcccc-ccCCCccccccccCCcccccch
Q 040611 206 ADKSAAYKADNEGKIPLHLAAVFGNGERN-EQGSNTSIEDKNNNDRKEKSSS 256 (434)
Q Consensus 206 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~~-~~~~~~~~~~~~~~g~t~~~~~ 256 (434)
.|++. +.+|..|.||+|.++..+..+.. +.+.+.+++.+|.+|+||.+..
T Consensus 145 ~ga~~-~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A 195 (229)
T 2vge_A 145 VEQSM-GLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWA 195 (229)
T ss_dssp HHHHT-TTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEE
T ss_pred cCCCc-ccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHH
Confidence 99987 55689999999966555444332 2355555889999999986543
No 78
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=9.8e-27 Score=204.09 Aligned_cols=156 Identities=12% Similarity=0.076 Sum_probs=138.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCH----HHHHHHHhcCCCC
Q 040611 33 GETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRV----EVVKMVTKEDPSL 108 (434)
Q Consensus 33 g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~----~~v~~Ll~~~~~~ 108 (434)
+.++||.|++.|+.+.++.+++.+.+. ..+..|.||||+|+..|+. +++++|+++|+++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~-----------------~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv 68 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED-----------------KESVLKSNILYDVLRNNNDEARYKISMFLINKGADI 68 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC-----------------HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc-----------------ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC
Confidence 568999999999999999999876431 1236799999999999975 5999999999997
Q ss_pred CccCCCCCCcHHHHHHHcCC------HHHHHHHHhcCCCCCCCCCCCc-hHHHHHHhcC-----CHHHHHHHHh-cCcCc
Q 040611 109 PYDANNAGETPLYLAAERGY------KDVMQDIFLTCKSPAGHGPMGR-TALHAVAFRN-----DTEMTKVLLE-SSIGT 175 (434)
Q Consensus 109 ~~~~~~~g~tpLh~A~~~g~------~~~v~~Ll~~~~~~~~~~~~g~-t~Lh~A~~~g-----~~~~v~~Ll~-~~~g~ 175 (434)
+ .+|..|+||||+|+..|+ .+++++|+++|++++.+|..|+ ||||+|+..+ +.+++++|++ + |+
T Consensus 69 n-~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~--ga 145 (186)
T 3t8k_A 69 K-SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS--GL 145 (186)
T ss_dssp S-CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST--TC
T ss_pred C-CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc--CC
Confidence 6 788999999999999997 5789999999999999999999 9999999854 3569999999 7 89
Q ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHhcCc
Q 040611 176 QTSKVDQQGWRPLHLAAHLGYYDVVKELLKADK 208 (434)
Q Consensus 176 ~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~ 208 (434)
+++.+|..|+||||+|++.|+.+++++|.+...
T Consensus 146 d~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 146 QLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp CTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 999999999999999999999999999998643
No 79
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2.5e-26 Score=195.61 Aligned_cols=141 Identities=15% Similarity=0.174 Sum_probs=68.5
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 040611 29 ANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSL 108 (434)
Q Consensus 29 ~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ 108 (434)
.+..|.||||+|+..|+.+++++|+++|.+++ ..|..|.||||+|+ .|+.+++++|++.+.++
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~ 70 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPN----------------APNSYGRRPIQVMM-MGSARVAELLLLHGAEP 70 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTT----------------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCC----------------CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC
Confidence 34455556666665555555555555555433 24455555555553 55555555555555554
Q ss_pred CccCCCCCCc-HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcH
Q 040611 109 PYDANNAGET-PLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRP 187 (434)
Q Consensus 109 ~~~~~~~g~t-pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~Tp 187 (434)
+ .+|..|.| |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++ |++++.+|..|.||
T Consensus 71 ~-~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 71 N-CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA--AGGTRGSNHARIDA 147 (156)
T ss_dssp C-CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC--C-------------
T ss_pred C-CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc--CCCCCccCcCcCcc
Confidence 3 44555555 55555555555555555555555555555555555555555555555555555 45555555555555
Q ss_pred HH
Q 040611 188 LH 189 (434)
Q Consensus 188 Lh 189 (434)
.+
T Consensus 148 ~~ 149 (156)
T 1bi7_B 148 AE 149 (156)
T ss_dssp --
T ss_pred cc
Confidence 44
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2.9e-26 Score=195.21 Aligned_cols=145 Identities=23% Similarity=0.240 Sum_probs=119.7
Q ss_pred ccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCch-HHH
Q 040611 76 GMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRT-ALH 154 (434)
Q Consensus 76 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t-~Lh 154 (434)
...+..|.||||+|+..|+.+++++|++++++++ ..|..|.||||+|+ .|+.+++++|++.|++++..|..|+| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPN-APNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTT-CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 3468889999999999999999999999998865 67899999999985 99999999999999999999999999 999
Q ss_pred HHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHH
Q 040611 155 AVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLA 225 (434)
Q Consensus 155 ~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 225 (434)
+|+..|+.+++++|+++ |++++.+|..|+||||+|+..|+.+++++|+++|++. +.+|..|.||.+-+
T Consensus 84 ~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRA--GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT-RGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHTCHHHHHHHHHH--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HHHHCCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC-CccCcCcCcccccC
Confidence 99999999999999999 8999999999999999999999999999999999988 56699999998744
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=7.8e-27 Score=213.27 Aligned_cols=162 Identities=21% Similarity=0.203 Sum_probs=115.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhc
Q 040611 80 EAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFR 159 (434)
Q Consensus 80 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~ 159 (434)
..|.||||.|++.|+.+.++.|++++.++. .+..|.||||.|+..|+.+++++|++.|++++..|..|+||||+|+..
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 468999999999999999999999999876 357789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCC-cHHHHH--HHhCCcccccc
Q 040611 160 NDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGK-IPLHLA--AVFGNGERNEQ 236 (434)
Q Consensus 160 g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~-tpLh~A--~~~g~~~~~~~ 236 (434)
|+.+++++|+++ |++++.+|.+|+||||+|+..|+.+++++|+++|++.. .+|..|. ||||+| +..|+.++++.
T Consensus 81 g~~~~v~~Ll~~--ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 81 GHTEIVKFLVQF--GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp TCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred CCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHHHHhhhccHHHHHH
Confidence 999999999999 89999999999999999999999999999999999884 4566665 999999 78899999876
Q ss_pred --CCCccccccc
Q 040611 237 --GSNTSIEDKN 246 (434)
Q Consensus 237 --~~~~~~~~~~ 246 (434)
..+++++..+
T Consensus 158 Ll~~~a~~~~~~ 169 (239)
T 1ycs_B 158 LYGVQEKMGIMN 169 (239)
T ss_dssp HHHHHHHTTTTG
T ss_pred HHHhhhcccccc
Confidence 3344444443
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=5.4e-26 Score=188.86 Aligned_cols=131 Identities=22% Similarity=0.275 Sum_probs=123.6
Q ss_pred hccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CchHH
Q 040611 75 LGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPM-GRTAL 153 (434)
Q Consensus 75 l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L 153 (434)
++..|..|.||||+|++.|+.+++++|++++++++ .+|..|.||||+|+. |+.+++++|++.|++++..|.. |+|||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN-ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 45688999999999999999999999999998865 688999999999999 9999999999999999999999 99999
Q ss_pred HHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcc
Q 040611 154 HAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKS 209 (434)
Q Consensus 154 h~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~ 209 (434)
|+|+..|+.+++++|+++ |.+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 83 ~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRA--GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHT--CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999 889999999999999999999999999999998764
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=1.4e-25 Score=186.42 Aligned_cols=129 Identities=15% Similarity=0.186 Sum_probs=121.5
Q ss_pred cccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhc
Q 040611 25 LLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKE 104 (434)
Q Consensus 25 ~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~ 104 (434)
.++.+|..|.||||+|+..|+.+++++|+++|.+++ .+|..|.||||+|+. |+.+++++|+++
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~ 66 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN----------------ALNRFGRRPIQVMMM-GSAQVAELLLLH 66 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTT----------------CCCTTCCTTTTTSTT-SCHHHHHHHHHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcC----------------CcCCCCCCHHHHHHc-CCHHHHHHHHHC
Confidence 367789999999999999999999999999998755 478899999999999 999999999999
Q ss_pred CCCCCccCCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhc
Q 040611 105 DPSLPYDANNA-GETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLES 171 (434)
Q Consensus 105 ~~~~~~~~~~~-g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 171 (434)
+++++ .+|.. |.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++
T Consensus 67 g~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 67 GAEPN-CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp TCCSS-CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99976 67778 99999999999999999999999999999999999999999999999999999988
No 84
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=3.5e-27 Score=229.08 Aligned_cols=160 Identities=15% Similarity=0.069 Sum_probs=131.3
Q ss_pred CcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 040611 28 KANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPS 107 (434)
Q Consensus 28 ~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~ 107 (434)
..+.+++||||+||+.|+.++|++|++.|+.... ....|..|.||||+|++.|+.+++++|++++++
T Consensus 87 ~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~-------------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad 153 (376)
T 2aja_A 87 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEI-------------VKVIQAENYQAFRLAAENGHLHVLNRLCELAPT 153 (376)
T ss_dssp HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSS-------------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTT
T ss_pred HcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHH-------------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 3456678999999999999999999999874221 112455678899999999999999999999975
Q ss_pred CC--ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCCCchHHHHHH-hcCCHHHHHHHHhcCcCcccccccC
Q 040611 108 LP--YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAG--HGPMGRTALHAVA-FRNDTEMTKVLLESSIGTQTSKVDQ 182 (434)
Q Consensus 108 ~~--~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~g~t~Lh~A~-~~g~~~~v~~Ll~~~~g~~~~~~d~ 182 (434)
.. ...+.+ .||||+|+.+|+.+++++|+++|++++. .|..|.||||.|+ ..|+.+++++|++. |.
T Consensus 154 ~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~--ga------- 223 (376)
T 2aja_A 154 EIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC--PV------- 223 (376)
T ss_dssp THHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS--HH-------
T ss_pred ccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC--CC-------
Confidence 21 112222 8999999999999999999999998776 7888999999999 99999999999986 43
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCccc
Q 040611 183 QGWRPLHLAAHLGYYDVVKELLKADKSA 210 (434)
Q Consensus 183 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 210 (434)
.|+||||+|+..|+.+++++|++++++.
T Consensus 224 ~~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 224 MLAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp HHHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred ccchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 2889999999999999999999876543
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.7e-24 Score=175.25 Aligned_cols=126 Identities=35% Similarity=0.478 Sum_probs=120.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC
Q 040611 81 AKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRN 160 (434)
Q Consensus 81 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g 160 (434)
+|+||||.|++.|+.+++++|+++++++. ..|..|.||||+|+..|+.+++++|++.|.+++..+..|.||||.|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 48999999999999999999999998865 67899999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcc
Q 040611 161 DTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKS 209 (434)
Q Consensus 161 ~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~ 209 (434)
+.+++++|+++ |.+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999 789999999999999999999999999999998864
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.3e-24 Score=180.44 Aligned_cols=127 Identities=24% Similarity=0.361 Sum_probs=119.1
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 040611 78 TNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVA 157 (434)
Q Consensus 78 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~ 157 (434)
....+.||||+|+..|+.+++++|++++++++ ..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||.|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVN-AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 45678899999999999999999999999875 68899999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 040611 158 FRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKAD 207 (434)
Q Consensus 158 ~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 207 (434)
..|+.+++++|+++ |.+++.+|.+|+||||+|+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~--g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKH--GADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHc--CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999 8899999999999999999999999999999864
No 87
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=2.9e-27 Score=229.57 Aligned_cols=223 Identities=12% Similarity=0.060 Sum_probs=161.5
Q ss_pred cccccCCcHHHHHHHHHhcCCcc--ccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccC
Q 040611 3 TFKKQSSSLEHFVTDILEMSPGL--LLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNE 80 (434)
Q Consensus 3 ~~~a~~~~~~~~v~~ll~~~~~~--l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (434)
+..|+..|+.+++++|++.+... ....|..|.||||+||..|+.++|++|+++|++... .+..+.
T Consensus 96 Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~-------------~~i~~~ 162 (376)
T 2aja_A 96 CFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM-------------AMIQAE 162 (376)
T ss_dssp HHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-------------HHHSHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-------------cccCCC
Confidence 34678889999999999987632 224566789999999999999999999999975311 111222
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCc-cCCCCCCcHHHHHH-HcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHh
Q 040611 81 AKDKALHEAVRYNRVEVVKMVTKEDPSLPY-DANNAGETPLYLAA-ERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAF 158 (434)
Q Consensus 81 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~-~~~~~g~tpLh~A~-~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~ 158 (434)
+ .||||+|+..|+.+++++|+++++++.. ..|..|.||||+|+ .+|+.+++++|++.|+ .|.||||.|+.
T Consensus 163 ~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~ 234 (376)
T 2aja_A 163 N-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFE 234 (376)
T ss_dssp H-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTT
T ss_pred C-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHH
Confidence 2 8999999999999999999999988542 26778999999999 9999999999998763 38999999999
Q ss_pred cCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCC---------------------------HHHHHHHHhcCccc-
Q 040611 159 RNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGY---------------------------YDVVKELLKADKSA- 210 (434)
Q Consensus 159 ~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~---------------------------~~iv~~Ll~~~~~~- 210 (434)
.|+.+++++|+++ |++++..|. +++.|+..|+ .+.+++|++.+...
T Consensus 235 ~g~~evv~lL~~~--ga~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~ 308 (376)
T 2aja_A 235 YGEKYVNPFIARH--VNRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKA 308 (376)
T ss_dssp TTTTTHHHHHHHH--HHHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGG
T ss_pred CCCHHHHHHHHhc--CcccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhh
Confidence 9999999999998 677665543 4444444444 33445555432110
Q ss_pred ---ccccccCCCcHHHHHHHhCCccccccCCCccccccccCCcccc
Q 040611 211 ---AYKADNEGKIPLHLAAVFGNGERNEQGSNTSIEDKNNNDRKEK 253 (434)
Q Consensus 211 ---~~~~d~~g~tpLh~A~~~g~~~~~~~~~~~~~~~~~~~g~t~~ 253 (434)
.....+.++||||+|+..|+.+++++.... ...++..++++.
T Consensus 309 l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~-~~v~~~~~~~~~ 353 (376)
T 2aja_A 309 LAPTATIPGDANELLRLALRLGNQGACALLLSI-PSVLALTKANNY 353 (376)
T ss_dssp GSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS-HHHHHSCC----
T ss_pred hhccCCCCCCccHHHHHHHHcCcHHHHHHHHcC-hHHHHHHHHhcc
Confidence 012235678999999999999999873321 244555565553
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=7.2e-26 Score=198.55 Aligned_cols=150 Identities=11% Similarity=0.022 Sum_probs=134.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 040611 82 KDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYK----DVMQDIFLTCKSPAGHGPMGRTALHAVA 157 (434)
Q Consensus 82 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~ 157 (434)
+.++||.|++.|+.+.++.+++.+++. ..+..|+||||+|+.+|+. +++++|++.|++++.+|.+|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 467999999999999999999988653 2237799999999999975 5999999999999999999999999999
Q ss_pred hcCC------HHHHHHHHhcCcCcccccccCCCC-cHHHHHHHcC-----CHHHHHHHHh-cCcccccccccCCCcHHHH
Q 040611 158 FRND------TEMTKVLLESSIGTQTSKVDQQGW-RPLHLAAHLG-----YYDVVKELLK-ADKSAAYKADNEGKIPLHL 224 (434)
Q Consensus 158 ~~g~------~~~v~~Ll~~~~g~~~~~~d~~G~-TpLh~A~~~g-----~~~iv~~Ll~-~~~~~~~~~d~~g~tpLh~ 224 (434)
..++ .+++++|+++ |+++|.+|..|+ ||||+|+..+ +.+++++|++ +|+++ +.+|..|+||||+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~--Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEK--GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDKWGLTALEF 160 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHT--TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCTTSCCHHHH
T ss_pred HcCCcchhhHHHHHHHHHHC--CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCCCCCCHHHH
Confidence 9887 5789999999 899999999999 9999999954 4579999999 88887 6779999999999
Q ss_pred HHHhCCcccccc
Q 040611 225 AAVFGNGERNEQ 236 (434)
Q Consensus 225 A~~~g~~~~~~~ 236 (434)
|++.|+.+++++
T Consensus 161 A~~~~~~~~v~~ 172 (186)
T 3t8k_A 161 VKRCQKPIALKM 172 (186)
T ss_dssp HHTTTCHHHHHH
T ss_pred HHHcCCHHHHHH
Confidence 999999988876
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=4.5e-24 Score=177.22 Aligned_cols=126 Identities=21% Similarity=0.227 Sum_probs=117.5
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 040611 29 ANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSL 108 (434)
Q Consensus 29 ~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ 108 (434)
....|.||||+|+..|+.+++++|+++|.+++ ..|..|.||||+|+..|+.+++++|++.++++
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 73 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVN----------------AKDEYGLTPLYLATAHGHLEIVEVLLKNGADV 73 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTT----------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCC----------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 45678999999999999999999999998755 47889999999999999999999999999986
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhc
Q 040611 109 PYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLES 171 (434)
Q Consensus 109 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 171 (434)
+ ..|..|.||||+|+..|+.+++++|+++|++++..|.+|+||||+|+..|+.+++++|++.
T Consensus 74 ~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 74 N-AVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp T-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred C-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 6 6888999999999999999999999999999999999999999999999999999999986
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1e-23 Score=171.81 Aligned_cols=123 Identities=32% Similarity=0.472 Sum_probs=116.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCcc
Q 040611 32 KGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYD 111 (434)
Q Consensus 32 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~ 111 (434)
+|+||||.|+..|+.+++++|+++|.+++ ..|..|.||||+|+..|+.+++++|++.++++. .
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~----------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~ 63 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN----------------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-A 63 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTT----------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCC----------------CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-c
Confidence 58999999999999999999999988754 468899999999999999999999999999865 6
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhc
Q 040611 112 ANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLES 171 (434)
Q Consensus 112 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 171 (434)
+|..|.||||+|+..|+.+++++|++.|++++..|..|.||||.|+..|+.+++++|+++
T Consensus 64 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 889999999999999999999999999999999999999999999999999999999998
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3.1e-24 Score=187.67 Aligned_cols=141 Identities=17% Similarity=0.141 Sum_probs=126.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 040611 30 NTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLP 109 (434)
Q Consensus 30 ~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~ 109 (434)
+.+|+||||+|+..|+.++++.|++ +.+++ ..|..|.||||+|+..|+.+++++|++.+++++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~----------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 103 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVD----------------AVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 103 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT----------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC----------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5689999999999999999999999 77654 478899999999999999999999999999987
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHH
Q 040611 110 YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLH 189 (434)
Q Consensus 110 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh 189 (434)
...+..|.||||+|+..|+.+++++|+++|++++..|.+|+||||+|+..++ ...+.+||+
T Consensus 104 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~-------------------~~~~~~~l~ 164 (183)
T 3deo_A 104 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK-------------------TTPKGNPMQ 164 (183)
T ss_dssp CCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH-------------------TCCCCSHHH
T ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc-------------------CcccccHHH
Confidence 4444899999999999999999999999999999999999999999986422 135679999
Q ss_pred HHHHcCCHHHHHHHHhc
Q 040611 190 LAAHLGYYDVVKELLKA 206 (434)
Q Consensus 190 ~A~~~g~~~iv~~Ll~~ 206 (434)
+|++.|+.+++++|.++
T Consensus 165 ~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 165 FGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHcCHHHHHHHHHHh
Confidence 99999999999999764
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=199.07 Aligned_cols=141 Identities=20% Similarity=0.167 Sum_probs=124.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCcc-----CCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCchHH
Q 040611 82 KDKALHEAVRYNRVEVVKMVTKEDPSLPYD-----ANNAGETPLYLAAER---GYKDVMQDIFLTCKSPAGHGPMGRTAL 153 (434)
Q Consensus 82 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L 153 (434)
+.++||.|+..|+.+.++.|++.+++++.. .+..|.||||+|+.. |+.+++++|++.|++++..|.+|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 456799999999999999999999997643 688999999999997 899999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCc
Q 040611 154 HAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNG 231 (434)
Q Consensus 154 h~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 231 (434)
|+|+..|+.+++++|+++ |++++.+|.+|+||||+|+..|+.+++++|++.+++ .|.||||+|+..|+.
T Consensus 231 h~A~~~g~~~~v~~Ll~~--gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKG--RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTTCHHHHHHHHHT--TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC--------
T ss_pred HHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCCc
Confidence 999999999999999999 899999999999999999999999999999998754 589999999998864
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=3.6e-24 Score=196.24 Aligned_cols=143 Identities=17% Similarity=0.120 Sum_probs=127.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 040611 30 NTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLP 109 (434)
Q Consensus 30 ~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~ 109 (434)
+.+|+||||+|++.|+.++++.|++ +.+++ .+|..|.||||+|+..|+.+++++|++++++++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~----------------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 104 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVD----------------AVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 104 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTT----------------CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCC----------------CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 4579999999999999999999999 77654 478899999999999999999999999999987
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHH
Q 040611 110 YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLH 189 (434)
Q Consensus 110 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh 189 (434)
...+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..+ .+..+.||||
T Consensus 105 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-------------------~~~~~~~~l~ 165 (244)
T 3ui2_A 105 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL-------------------KTTPKGNPMQ 165 (244)
T ss_dssp CCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH-------------------TTCCCSSHHH
T ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-------------------hccCCCCHHH
Confidence 444488999999999999999999999999999999999999999998521 1256889999
Q ss_pred HHHHcCCHHHHHHHHhcCc
Q 040611 190 LAAHLGYYDVVKELLKADK 208 (434)
Q Consensus 190 ~A~~~g~~~iv~~Ll~~~~ 208 (434)
+|+..|+.+++++|++...
T Consensus 166 ~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 166 FGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHE
T ss_pred HHHHcChHHHHHHHHHhcc
Confidence 9999999999999998643
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=4.2e-24 Score=177.54 Aligned_cols=128 Identities=21% Similarity=0.244 Sum_probs=105.2
Q ss_pred cccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHH
Q 040611 77 MTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAV 156 (434)
Q Consensus 77 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A 156 (434)
.+|..|.||||+|+..|+.+++++|++.++++. .+|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDA 83 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHH
Confidence 367888888888888888888888888888765 6788888888888888888888888888888888888888888888
Q ss_pred HhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 040611 157 AFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKAD 207 (434)
Q Consensus 157 ~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 207 (434)
+..|+.+++++|+++ |++++.+|.+|+||||+|+..+..+++++|.+.+
T Consensus 84 ~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSY--GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHTTCHHHHHHHHHT--TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 888888888888888 7888888888888888888888877777666543
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.1e-23 Score=175.04 Aligned_cols=127 Identities=22% Similarity=0.291 Sum_probs=116.1
Q ss_pred CcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 040611 28 KANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPS 107 (434)
Q Consensus 28 ~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~ 107 (434)
.+|.+|+||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+..|+.+++++|++.+.+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 68 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN----------------VKDHAGWTPLHEACNHGHLKVVELLLQHKAL 68 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc
Confidence 468899999999999999999999999998765 4788999999999999999999999999998
Q ss_pred CCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhc
Q 040611 108 LPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLES 171 (434)
Q Consensus 108 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 171 (434)
+. .+|..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..+..+++++|.+.
T Consensus 69 ~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 69 VN-TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp TT-CCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred cc-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 65 7889999999999999999999999999999999999999999999998888888777655
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=1.4e-23 Score=183.50 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=124.4
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCchHHHHH
Q 040611 78 TNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHG-PMGRTALHAV 156 (434)
Q Consensus 78 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~Lh~A 156 (434)
.+..|.||||+|++.|+.++++.|++ +.+++ .+|..|.||||+|+..|+.+++++|++.|++++..+ ..|+||||+|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 35688999999999999999999999 77755 689999999999999999999999999999999888 8999999999
Q ss_pred HhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 157 AFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 157 ~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+..|+.+++++|+++ |++++.+|.+|+||||+|++.++ ...+.+||++|+..|+.++++.
T Consensus 118 ~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~~~~~i~~~ 177 (183)
T 3deo_A 118 AGYVRPEVVEALVEL--GADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINV 177 (183)
T ss_dssp HHTTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHc--CCCCcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHcCHHHHHHH
Confidence 999999999999999 89999999999999999987432 2457899999999998887764
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=9.7e-23 Score=192.43 Aligned_cols=148 Identities=19% Similarity=0.128 Sum_probs=123.9
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHc---CCHHHHHHHHhcCCC
Q 040611 31 TKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRY---NRVEVVKMVTKEDPS 107 (434)
Q Consensus 31 ~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~ 107 (434)
..+.++||.|+..|+.+.++.|++.|.+++..... ...|..|.||||+|+.. |+.+++++|++.+++
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~----------~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad 218 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPG----------PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH 218 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEEC----------SSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCC----------cccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC
Confidence 34568899999999999999999999886541000 01588999999999997 899999999999998
Q ss_pred CCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcH
Q 040611 108 LPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRP 187 (434)
Q Consensus 108 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~Tp 187 (434)
++ .+|..|.||||+|+..|+.+++++|++.|++++..|.+|+||||+|+..|+.+++++|++. |++ .|.||
T Consensus 219 vn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~--ga~------~g~tp 289 (301)
T 2b0o_E 219 LD-AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA--QAG------TFAFP 289 (301)
T ss_dssp TT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHH--HHH------TTSSC
T ss_pred CC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh--cCC------CCCCh
Confidence 76 6889999999999999999999999999999999999999999999999999999999998 443 68999
Q ss_pred HHHHHHcCCH
Q 040611 188 LHLAAHLGYY 197 (434)
Q Consensus 188 Lh~A~~~g~~ 197 (434)
||+|+..|+.
T Consensus 290 Lh~A~~~g~~ 299 (301)
T 2b0o_E 290 LHVDYSWVIS 299 (301)
T ss_dssp CC--------
T ss_pred hHHHHhcCCc
Confidence 9999998864
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=2e-23 Score=188.27 Aligned_cols=130 Identities=23% Similarity=0.356 Sum_probs=71.5
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCchHHHHH
Q 040611 78 TNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLT-CKSPAGHGPMGRTALHAV 156 (434)
Q Consensus 78 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~Lh~A 156 (434)
.+..|.||||+|+..|+.++++.|++.+.+++ .+|..|.||||+|+..|+.+++++|++. |++++..|..|+||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVN-GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 34455555555555555555555555555543 4455556666666666666666666555 555555566666666666
Q ss_pred HhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCccc
Q 040611 157 AFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSA 210 (434)
Q Consensus 157 ~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 210 (434)
+..|+.+++++|+++ |++++.+|.+|+||||+|+..|+.++++.|++.++..
T Consensus 148 ~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 148 AWKGYADIVQLLLAK--GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHHTCHHHHHHHHHH--TCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred HHcCCHHHHHHHHHc--CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 666666666666665 5556666666666666666666666666666555443
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=1.9e-23 Score=191.39 Aligned_cols=137 Identities=18% Similarity=0.195 Sum_probs=125.2
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCchHHHHH
Q 040611 78 TNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHG-PMGRTALHAV 156 (434)
Q Consensus 78 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~Lh~A 156 (434)
.+..|.||||+|++.|+.++++.|++ +.+++ .+|..|.||||+|+..|+.+++++|++.|++++..+ ..|+||||+|
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 35678999999999999999999999 77755 789999999999999999999999999999999888 8899999999
Q ss_pred HhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc
Q 040611 157 AFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ 236 (434)
Q Consensus 157 ~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 236 (434)
+..|+.+++++|+++ |++++.+|..|+||||+|+..+ .+..+.||||+|+..|+.++++.
T Consensus 119 ~~~g~~~~v~~Ll~~--ga~~~~~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~g~~~iv~~ 178 (244)
T 3ui2_A 119 AGYVRPEVVEALVEL--GADIEVEDERGLTALELAREIL------------------KTTPKGNPMQFGRRIGLEKVINV 178 (244)
T ss_dssp HHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHHcChHHHHHH
Confidence 999999999999999 8999999999999999998622 23578999999999999998776
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=4.5e-23 Score=167.95 Aligned_cols=113 Identities=17% Similarity=0.238 Sum_probs=89.3
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHh
Q 040611 79 NEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAF 158 (434)
Q Consensus 79 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~ 158 (434)
+..|.||||+|+..|+.++++.|++.+++++ ..|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVN-RTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTT-SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 4567788888888888888888888887754 667788888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHc
Q 040611 159 RNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHL 194 (434)
Q Consensus 159 ~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~ 194 (434)
.|+.+++++|+++ |++++.+|.+|+||||+|...
T Consensus 83 ~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 83 EGHVSCVKLLLSK--GADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHCCCH
T ss_pred cCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHhCCH
Confidence 8888888888887 677888888888888887433
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=2.5e-23 Score=187.56 Aligned_cols=137 Identities=21% Similarity=0.255 Sum_probs=115.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHH
Q 040611 112 ANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLA 191 (434)
Q Consensus 112 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A 191 (434)
.+..|.||||+|+..|+.++++.|++.|.+++..|..|+||||+|+..|+.+++++|++.. |++++.+|.+|+||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQP-NIELNQQNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTST-TCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCC-CCCccccCCCCCCHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999874 589999999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHHhCCcccccc--CCCccccccccCCc
Q 040611 192 AHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAVFGNGERNEQ--GSNTSIEDKNNNDR 250 (434)
Q Consensus 192 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~--~~~~~~~~~~~~g~ 250 (434)
+..|+.+++++|+++|++. +.+|.+|+||||+|+..++.++++. ..++..+.+|.++.
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999999887 5679999999999999999999887 44554555554443
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=7.9e-23 Score=166.49 Aligned_cols=116 Identities=22% Similarity=0.254 Sum_probs=104.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 040611 30 NTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLP 109 (434)
Q Consensus 30 ~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~ 109 (434)
+..|+||||.|+..|+.+++++|++.|.+++ ..|..|.||||+|+..|+.+++++|++.+++++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 67 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVN----------------RTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 67 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTT----------------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcC----------------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5678999999999999999999999998754 478899999999999999999999999999865
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCH
Q 040611 110 YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDT 162 (434)
Q Consensus 110 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~ 162 (434)
.+|..|.||||+|+..|+.+++++|+++|++++..|.+|+||||+|...+..
T Consensus 68 -~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 119 (123)
T 3aaa_C 68 -APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIK 119 (123)
T ss_dssp -CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHH
T ss_pred -cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHH
Confidence 7899999999999999999999999999999999999999999999544333
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=2.2e-21 Score=181.07 Aligned_cols=179 Identities=19% Similarity=0.179 Sum_probs=143.2
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCC--CChhhHHHHHHHhh------cc-------ccCCCChHHHHHHHcC
Q 040611 29 ANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQ--NDPEKVIEAATLML------GM-------TNEAKDKALHEAVRYN 93 (434)
Q Consensus 29 ~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~--~~~~~~~~~~~~~l------~~-------~~~~g~t~Lh~Aa~~g 93 (434)
.|..+.++|+.+...|+..+.+.+......... .++..........+ .. .+....++|+.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 577789999999999998877766544322211 11110000111111 00 1112346899999999
Q ss_pred CHHHHHHHHhcCCCCCc-----cCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHH
Q 040611 94 RVEVVKMVTKEDPSLPY-----DANNAGETPLYLAAER---GYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMT 165 (434)
Q Consensus 94 ~~~~v~~Ll~~~~~~~~-----~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v 165 (434)
+.+.++.+++.++++.. ..|..|.||||+|+.. |+.+++++|+++|++++..|..|+||||+|+..|+.+++
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v 221 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL 221 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999998643 3478899999999999 899999999999999999999999999999999999999
Q ss_pred HHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcc
Q 040611 166 KVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKS 209 (434)
Q Consensus 166 ~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~ 209 (434)
++|+++ |++++.+|.+|+||||+|+..|+.+++++|++++++
T Consensus 222 ~~Ll~~--gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 222 KLLLRG--KASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHc--CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999998 899999999999999999999999999999998764
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=7.6e-21 Score=183.78 Aligned_cols=149 Identities=17% Similarity=0.166 Sum_probs=118.7
Q ss_pred ccCCCChHHHHHHHc-CCHHHHHHHHhcCCCCCccCC--CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHH
Q 040611 78 TNEAKDKALHEAVRY-NRVEVVKMVTKEDPSLPYDAN--NAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALH 154 (434)
Q Consensus 78 ~~~~g~t~Lh~Aa~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh 154 (434)
.+..+.|+||.|+.. |+.++++.|++.+++++ ..+ ..|.||||+|+..|+.+++++|+++|++++..|..|+||||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn-~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVN-WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCC-ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 344567899999999 99999999999999976 455 88999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCccc--ccccccCCCcHHHHHHHhC
Q 040611 155 AVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSA--AYKADNEGKIPLHLAAVFG 229 (434)
Q Consensus 155 ~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~--~~~~d~~g~tpLh~A~~~g 229 (434)
+|+..|+.+++++|+++ |++++.+|.+|+||||+|+..|+.+++++|++.+... ....+..+.|+++++....
T Consensus 274 ~A~~~g~~~~v~~LL~~--Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 274 HATILGHTGLACLFLKR--GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHcCcHHHHHHHHHC--cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 99999999999999999 8999999999999999999999999999999854322 1234567889998876653
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=9.3e-21 Score=191.50 Aligned_cols=137 Identities=20% Similarity=0.189 Sum_probs=118.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCcc-----CCCCCCcHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCCCchHH
Q 040611 82 KDKALHEAVRYNRVEVVKMVTKEDPSLPYD-----ANNAGETPLYLAAE---RGYKDVMQDIFLTCKSPAGHGPMGRTAL 153 (434)
Q Consensus 82 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~tpLh~A~~---~g~~~~v~~Ll~~~~~~~~~~~~g~t~L 153 (434)
..+.||.|+..|+.+.++.|++.+++++.. .|..|.||||+|+. .|+.+++++|+++|++++..|.+|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 347899999999999999999999987632 37899999999977 9999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccccCCCcHHHHHHH
Q 040611 154 HAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLGYYDVVKELLKADKSAAYKADNEGKIPLHLAAV 227 (434)
Q Consensus 154 h~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 227 (434)
|+|+..|+.+++++|+++ |++++.+|.+|+||||+|+..|+.+++++|+++|++... +|+|.+..
T Consensus 212 h~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-------~~~h~~~~ 276 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKG--RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-------FPLHVDYS 276 (497)
T ss_dssp HHHTTTTCHHHHHHHHHT--CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred HHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-------Ccceeecc
Confidence 999999999999999999 899999999999999999999999999999999987632 67777654
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=1.3e-20 Score=182.27 Aligned_cols=151 Identities=14% Similarity=0.156 Sum_probs=117.2
Q ss_pred CCCCChHHHHHHHc-CCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 040611 30 NTKGETLLHIAGRH-GHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSL 108 (434)
Q Consensus 30 ~~~g~TpLh~Aa~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ 108 (434)
+.++.|+||.|+.. |+.++++.|+++|++++..+ .+..|.||||+|+..|+.+++++|+++++++
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~--------------~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv 261 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVN--------------GGQDNATPLIQATAANSLLACEFLLQNGANV 261 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCC--------------TTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccc--------------cccCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 34567899999999 99999999999999876411 2378999999999999999999999999997
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCc-CcccccccCCCCcH
Q 040611 109 PYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSI-GTQTSKVDQQGWRP 187 (434)
Q Consensus 109 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-g~~~~~~d~~G~Tp 187 (434)
+ ..|..|.||||+|+..|+.+++++|+++|++++..|.+|.||||+|+..|+.+++++|++... +......+..+.|+
T Consensus 262 n-~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~ 340 (368)
T 3jue_A 262 N-QADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETY 340 (368)
T ss_dssp T-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------
T ss_pred C-CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCH
Confidence 6 789999999999999999999999999999999999999999999999999999999997631 23344556778899
Q ss_pred HHHHHHcC
Q 040611 188 LHLAAHLG 195 (434)
Q Consensus 188 Lh~A~~~g 195 (434)
++++....
T Consensus 341 l~i~~~~~ 348 (368)
T 3jue_A 341 LDIFRDFS 348 (368)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 88876543
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=6.2e-21 Score=178.02 Aligned_cols=128 Identities=16% Similarity=0.128 Sum_probs=117.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHc---CCHHHHHHHHhcCCCCC
Q 040611 33 GETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRY---NRVEVVKMVTKEDPSLP 109 (434)
Q Consensus 33 g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~~ 109 (434)
..++||.|+..|+.+.++.+++.|.+.+... .++..|..|.||||+|+.. |+.+++++|++++++++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~----------~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in 199 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKI----------PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD 199 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBC----------CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhc----------cccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc
Confidence 3579999999999999999999998865311 1345688999999999999 89999999999999976
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhc
Q 040611 110 YDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLES 171 (434)
Q Consensus 110 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 171 (434)
.+|..|.||||+|+..|+.+++++|++.|++++..|.+|+||||+|+..|+.+++++|+++
T Consensus 200 -~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 200 -KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp -CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 7899999999999999999999999999999999999999999999999999999999998
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=2.2e-20 Score=144.02 Aligned_cols=91 Identities=40% Similarity=0.536 Sum_probs=65.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHHHHHcC
Q 040611 116 GETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHLAAHLG 195 (434)
Q Consensus 116 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~A~~~g 195 (434)
|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcC
Confidence 66777777777777777777777777777777777777777777777777777776 6677777777777777777777
Q ss_pred CHHHHHHHHhcCc
Q 040611 196 YYDVVKELLKADK 208 (434)
Q Consensus 196 ~~~iv~~Ll~~~~ 208 (434)
+.+++++|+++|+
T Consensus 80 ~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 80 HLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 7777777777664
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=2.3e-20 Score=188.57 Aligned_cols=143 Identities=20% Similarity=0.151 Sum_probs=118.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHH---cCCHHHHHHHHhcCCCC
Q 040611 32 KGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVR---YNRVEVVKMVTKEDPSL 108 (434)
Q Consensus 32 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~---~g~~~~v~~Ll~~~~~~ 108 (434)
...+.||.|+..|+.+.++.|++.|++++.... ....|..|.||||+|++ .|+.+++++|+++|+++
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~----------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v 200 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLP----------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL 200 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC----------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCC----------CcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC
Confidence 345789999999999999999999998764211 11247899999999976 89999999999999997
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHH
Q 040611 109 PYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPL 188 (434)
Q Consensus 109 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpL 188 (434)
+ .+|..|.||||+|+..|+.+++++|+++|++++..|.+|+||||+|+..|+.+++++|+++ |++++. +|+
T Consensus 201 n-~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~--ga~~~~------~~~ 271 (497)
T 3lvq_E 201 D-AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA--QAGTFA------FPL 271 (497)
T ss_dssp T-CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT--CC-------------
T ss_pred C-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh--CCCCCC------Ccc
Confidence 6 7899999999999999999999999999999999999999999999999999999999999 777766 577
Q ss_pred HHHHH
Q 040611 189 HLAAH 193 (434)
Q Consensus 189 h~A~~ 193 (434)
|.+..
T Consensus 272 h~~~~ 276 (497)
T 3lvq_E 272 HVDYS 276 (497)
T ss_dssp -----
T ss_pred eeecc
Confidence 76654
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=3.4e-20 Score=142.93 Aligned_cols=92 Identities=30% Similarity=0.479 Sum_probs=67.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCcc
Q 040611 32 KGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYD 111 (434)
Q Consensus 32 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~ 111 (434)
+|+||||+|+..|+.+++++|++.|++++ .+|..|+||||+|+..|+.+++++|++.+++++ .
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n----------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~ 63 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN----------------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-A 63 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTT----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc----------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-c
Confidence 46777777777777777777777776644 356777777777777777777777777777754 5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 040611 112 ANNAGETPLYLAAERGYKDVMQDIFLTCK 140 (434)
Q Consensus 112 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 140 (434)
+|..|.||||+|+..|+.+++++|++.|+
T Consensus 64 ~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 67777777777777777777777777765
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=4.3e-20 Score=148.25 Aligned_cols=107 Identities=20% Similarity=0.267 Sum_probs=56.8
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 040611 78 TNEAKDKALHEAVRYNRVEVVKMVTKEDPSLPYDANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVA 157 (434)
Q Consensus 78 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~ 157 (434)
+|.+|.||||+|+..|+.++++.|++.+++++ ..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVN-ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS-CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 45555555555555555555555555555433 34555555555555555555555555555555555555555555555
Q ss_pred hcCCHHHHHHHHhcCcCcccccccCCCCcH
Q 040611 158 FRNDTEMTKVLLESSIGTQTSKVDQQGWRP 187 (434)
Q Consensus 158 ~~g~~~~v~~Ll~~~~g~~~~~~d~~G~Tp 187 (434)
..|+.+++++|+++ |++++.++..|.||
T Consensus 84 ~~~~~~~~~~Ll~~--ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAK--GADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTT--SSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHHc--CCCCCcCCcccccc
Confidence 55555555555555 45555555555544
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=6.1e-20 Score=147.35 Aligned_cols=109 Identities=24% Similarity=0.277 Sum_probs=101.1
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHH
Q 040611 111 DANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHL 190 (434)
Q Consensus 111 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~ 190 (434)
.+|.+|.||||+|+..|+.+++++|++.|++++..|..|.||||.|+..|+.+++++|++. |.+++.+|.+|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK--GADVNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT--TCCTTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCcccCCCCCCHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999 88999999999999999
Q ss_pred HHHcCCHHHHHHHHhcCcccccccccCCCcHH
Q 040611 191 AAHLGYYDVVKELLKADKSAAYKADNEGKIPL 222 (434)
Q Consensus 191 A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 222 (434)
|+..|+.+++++|+++|+++ +.++..|.+|-
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~-n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADV-NARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSH-HHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCCC-CcCCccccccc
Confidence 99999999999999999988 56688888873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=1.4e-17 Score=132.44 Aligned_cols=96 Identities=21% Similarity=0.254 Sum_probs=66.8
Q ss_pred CccccCcCCCCChHHHHHHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccccCCCChHHHHHHHcCCHHHHHHHH
Q 040611 23 PGLLLKANTKGETLLHIAGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMTNEAKDKALHEAVRYNRVEVVKMVT 102 (434)
Q Consensus 23 ~~~l~~~~~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll 102 (434)
|......|.+|.||||+|+..|+.+++++|++.|++++ .+|..|+||||+|+..|+.+++++|+
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~----------------~~d~~g~tpLh~A~~~~~~~~v~~Ll 77 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVA----------------AKDKNGSTPLHLAARNGHLEVVKLLL 77 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT----------------CCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC----------------ccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34456667778888888888888888888887776643 35677778888888888888888888
Q ss_pred hcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 040611 103 KEDPSLPYDANNAGETPLYLAAERGYKDVMQDI 135 (434)
Q Consensus 103 ~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 135 (434)
++++++. .+|..|.||||+|+..|+.+++++|
T Consensus 78 ~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 78 EAGADVX-AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCCcc-ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 7777754 5677777888887777777777765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.6e-17 Score=132.19 Aligned_cols=91 Identities=24% Similarity=0.284 Sum_probs=54.8
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHhcCcCcccccccCCCCcHHHH
Q 040611 111 DANNAGETPLYLAAERGYKDVMQDIFLTCKSPAGHGPMGRTALHAVAFRNDTEMTKVLLESSIGTQTSKVDQQGWRPLHL 190 (434)
Q Consensus 111 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~g~~~~~~d~~G~TpLh~ 190 (434)
..|.+|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEA--GADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccccCCCcHHHH
Confidence 3455566666666666666666666666666666666666666666666666666666665 55666666666666666
Q ss_pred HHHcCCHHHHHHH
Q 040611 191 AAHLGYYDVVKEL 203 (434)
Q Consensus 191 A~~~g~~~iv~~L 203 (434)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 6666666666554
No 115
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=40.07 E-value=2.2e+02 Score=26.00 Aligned_cols=35 Identities=17% Similarity=0.075 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHhhHHhhcCcch-hhhHHHhhhh
Q 040611 357 IQLALVVMVFAFLTGTYSVLHSAKV-LAVIISIITD 391 (434)
Q Consensus 357 ~~~s~~~m~~af~~~~~~v~~~~~~-~~~~~~~~~~ 391 (434)
+.++++-.+..|...+.-.+|.... .++-+.++.+
T Consensus 248 lgit~lLt~tv~~~~~~~~lP~~S~v~~id~~~~~~ 283 (347)
T 3rhw_A 248 LGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGAC 283 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCSSCCHHHHHHHHH
T ss_pred EEeehHHHHHHHHHHHHhhCCCccceeHHHHHHHHH
Confidence 3444555566677777777887543 2455544443
No 116
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=25.85 E-value=90 Score=20.13 Aligned_cols=16 Identities=6% Similarity=0.243 Sum_probs=10.4
Q ss_pred cchhhhHHHhhhhHHH
Q 040611 379 AKVLAVIISIITDGFF 394 (434)
Q Consensus 379 ~~~~~~~~~~~~~~~~ 394 (434)
.+||.|+++++++..+
T Consensus 10 vp~wiIi~svl~GLll 25 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLL 25 (54)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHH
Confidence 4678777777765333
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=25.06 E-value=1.5e+02 Score=27.97 Aligned_cols=61 Identities=11% Similarity=0.183 Sum_probs=42.4
Q ss_pred HHHcCCHHHHHHHHHhcCCCCCCChhhHHHHHHHhhccc--cCCCChHHHHHHHcCCHHHHHHHHhc
Q 040611 40 AGRHGHVDIVKDLIAECKKPHQNDPEKVIEAATLMLGMT--NEAKDKALHEAVRYNRVEVVKMVTKE 104 (434)
Q Consensus 40 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~t~Lh~Aa~~g~~~~v~~Ll~~ 104 (434)
.+..|+...|+..+..|.++...-. ......++.. -.-|.|.+|+|++..+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt----~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLT----ADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCC----HHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccC----HHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 3458999999999999888654211 1112233332 24688999999999999999888873
No 118
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=24.23 E-value=1e+02 Score=19.85 Aligned_cols=16 Identities=6% Similarity=0.254 Sum_probs=10.4
Q ss_pred cchhhhHHHhhhhHHH
Q 040611 379 AKVLAVIISIITDGFF 394 (434)
Q Consensus 379 ~~~~~~~~~~~~~~~~ 394 (434)
.+||.|+++++++..+
T Consensus 7 vp~WiIi~svl~GLLL 22 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLL 22 (54)
T ss_dssp CCTHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHH
Confidence 4677777777765433
No 119
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=22.78 E-value=59 Score=19.24 Aligned_cols=19 Identities=26% Similarity=0.454 Sum_probs=15.8
Q ss_pred HHHHHHcCCHHHHHHHHHh
Q 040611 37 LHIAGRHGHVDIVKDLIAE 55 (434)
Q Consensus 37 Lh~Aa~~g~~~~v~~Ll~~ 55 (434)
+..||..|+.+.++.|-.+
T Consensus 17 iyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHH
Confidence 5789999999999988654
No 120
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=21.08 E-value=2.4e+02 Score=25.71 Aligned_cols=20 Identities=20% Similarity=0.474 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHhhHHh
Q 040611 356 MIQLALVVMVFAFLTGTYSV 375 (434)
Q Consensus 356 ~~~~s~~~m~~af~~~~~~v 375 (434)
+..+|++.+..+|++|+|=+
T Consensus 282 LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 282 LTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhhccC
Confidence 56788889999999999965
No 121
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=21.05 E-value=86 Score=28.85 Aligned_cols=154 Identities=12% Similarity=0.107 Sum_probs=84.0
Q ss_pred cccCCCChHHHHHHHcCCHHHHHHHHhcC--CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCC--CCCCCCCch
Q 040611 77 MTNEAKDKALHEAVRYNRVEVVKMVTKED--PSLPYDANNAGETPLYLAAERGYKDVMQDIFLTC-KSP--AGHGPMGRT 151 (434)
Q Consensus 77 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~--~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~-~~~--~~~~~~g~t 151 (434)
+.|..|+..+.-....+..+....+++.- .-.....+..|.-.+..+......+-...+++.- ... -..|.+|+.
T Consensus 68 ~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ 147 (351)
T 3gvo_A 68 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNH 147 (351)
T ss_dssp HTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHH
T ss_pred HhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhH
Confidence 57888888888888888887777776642 1112235666766777666666655444444321 100 014667777
Q ss_pred HHHHHHhcCCHHHHHHHHhcCcCcc-cccccCCCCcHHHHHHHcCCHH----HHHHHHhcCcccccccccCCCcHHHHHH
Q 040611 152 ALHAVAFRNDTEMTKVLLESSIGTQ-TSKVDQQGWRPLHLAAHLGYYD----VVKELLKADKSAAYKADNEGKIPLHLAA 226 (434)
Q Consensus 152 ~Lh~A~~~g~~~~v~~Ll~~~~g~~-~~~~d~~G~TpLh~A~~~g~~~----iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 226 (434)
.+..+...+..+....+++.-.+.. .-..+..|...+..+......+ +++.|... ......|..|+-.+....
T Consensus 148 ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~--~~~L~~d~~Gn~ViQ~~l 225 (351)
T 3gvo_A 148 VVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQH--TEQLVQDQYGNYVIQHVL 225 (351)
T ss_dssp HHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTT--HHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhh--HHhcCCCchHHHHHHHHH
Confidence 6666665555544444443321111 1123455655555555544433 33333321 222345778888877777
Q ss_pred HhCCcc
Q 040611 227 VFGNGE 232 (434)
Q Consensus 227 ~~g~~~ 232 (434)
..+..+
T Consensus 226 ~~~~~~ 231 (351)
T 3gvo_A 226 EHGRPE 231 (351)
T ss_dssp HHSCHH
T ss_pred HhCchh
Confidence 776543
Done!