Query 040616
Match_columns 208
No_of_seqs 152 out of 1169
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 16:15:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pyf_A IOLS protein; beta-alph 100.0 1.5E-53 5.1E-58 352.1 20.2 193 1-194 11-214 (312)
2 3n2t_A Putative oxidoreductase 100.0 2.3E-53 8E-58 355.6 19.2 193 1-194 29-235 (348)
3 3v0s_A Perakine reductase; AKR 100.0 1.2E-53 3.9E-58 356.1 15.0 193 1-193 11-214 (337)
4 1pz1_A GSP69, general stress p 100.0 5.2E-53 1.8E-57 351.6 18.7 193 1-194 11-214 (333)
5 3n6q_A YGHZ aldo-keto reductas 100.0 6.4E-52 2.2E-56 346.8 19.7 191 1-194 23-233 (346)
6 3erp_A Putative oxidoreductase 100.0 9E-52 3.1E-56 346.6 20.2 191 1-194 44-253 (353)
7 1ur3_M Hypothetical oxidoreduc 100.0 7.4E-52 2.5E-56 342.6 19.3 205 1-208 33-262 (319)
8 1ynp_A Oxidoreductase, AKR11C1 100.0 2.8E-51 9.7E-56 338.9 18.3 187 1-194 31-227 (317)
9 3eau_A Voltage-gated potassium 100.0 1.8E-51 6.3E-56 341.6 16.5 190 1-194 13-220 (327)
10 3lut_A Voltage-gated potassium 100.0 2.7E-51 9.2E-56 345.4 16.7 190 1-194 47-254 (367)
11 1gve_A Aflatoxin B1 aldehyde r 100.0 1.2E-50 4.2E-55 336.6 18.6 184 2-194 4-204 (327)
12 3up8_A Putative 2,5-diketo-D-g 100.0 9.8E-51 3.3E-55 332.6 15.6 187 1-208 32-231 (298)
13 2bp1_A Aflatoxin B1 aldehyde r 100.0 2.4E-50 8.3E-55 338.7 18.3 184 2-194 37-237 (360)
14 3o0k_A Aldo/keto reductase; ss 100.0 9.8E-51 3.3E-55 330.6 15.4 187 1-208 35-235 (283)
15 3f7j_A YVGN protein; aldo-keto 100.0 2.6E-50 8.7E-55 327.3 16.6 187 1-208 15-214 (276)
16 4f40_A Prostaglandin F2-alpha 100.0 1.6E-50 5.5E-55 330.4 15.2 187 1-207 19-225 (288)
17 3b3e_A YVGN protein; aldo-keto 100.0 5.7E-50 1.9E-54 329.7 16.7 186 1-207 49-247 (310)
18 1vbj_A Prostaglandin F synthas 100.0 6.4E-50 2.2E-54 325.6 16.7 186 1-207 18-216 (281)
19 2wzm_A Aldo-keto reductase; ox 100.0 3.5E-50 1.2E-54 327.4 14.9 186 1-207 20-219 (283)
20 1hw6_A 2,5-diketo-D-gluconic a 100.0 4.8E-50 1.6E-54 326.0 14.2 186 1-207 12-213 (278)
21 1lqa_A TAS protein; TIM barrel 100.0 3.1E-49 1.1E-53 330.5 19.3 190 1-194 11-244 (346)
22 4exb_A Putative uncharacterize 100.0 1.6E-49 5.3E-54 324.9 16.8 187 1-193 40-245 (292)
23 3ln3_A Dihydrodiol dehydrogena 100.0 5.8E-49 2E-53 326.1 16.9 189 1-207 15-252 (324)
24 3o3r_A Aldo-keto reductase fam 100.0 5.1E-49 1.7E-53 325.5 16.4 187 1-208 11-245 (316)
25 1vp5_A 2,5-diketo-D-gluconic a 100.0 6.6E-49 2.3E-53 321.8 15.6 184 1-207 24-226 (298)
26 1mzr_A 2,5-diketo-D-gluconate 100.0 7.8E-49 2.7E-53 321.1 15.6 184 1-207 34-233 (296)
27 1us0_A Aldose reductase; oxido 100.0 2.8E-48 9.6E-53 321.0 17.1 186 1-207 11-244 (316)
28 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 2.2E-48 7.7E-53 322.4 16.0 189 1-207 14-251 (323)
29 3buv_A 3-OXO-5-beta-steroid 4- 100.0 2.5E-48 8.5E-53 322.6 15.9 190 1-207 16-254 (326)
30 1qwk_A Aldose reductase, aldo- 100.0 2E-48 6.9E-53 322.0 14.9 186 1-207 14-244 (317)
31 4gie_A Prostaglandin F synthas 100.0 3.8E-48 1.3E-52 316.6 16.4 187 1-208 22-224 (290)
32 3b3d_A YTBE protein, putative 100.0 2.6E-48 8.9E-53 320.8 15.3 186 1-207 49-251 (314)
33 3krb_A Aldose reductase; ssgci 100.0 4.6E-48 1.6E-52 321.8 16.8 186 1-207 23-261 (334)
34 1mi3_A Xylose reductase, XR; a 100.0 6.2E-48 2.1E-52 319.7 17.0 186 1-207 14-255 (322)
35 1s1p_A Aldo-keto reductase fam 100.0 5.9E-48 2E-52 320.9 16.3 189 1-207 14-251 (331)
36 3h7u_A Aldo-keto reductase; st 100.0 7.4E-48 2.5E-52 320.7 15.4 186 1-207 34-257 (335)
37 1zgd_A Chalcone reductase; pol 100.0 5.9E-48 2E-52 318.5 14.4 188 1-207 18-244 (312)
38 2bgs_A Aldose reductase; holoe 100.0 3.2E-47 1.1E-51 317.5 15.5 185 1-207 46-264 (344)
39 4gac_A Alcohol dehydrogenase [ 100.0 1.3E-46 4.4E-51 312.0 16.8 186 1-207 11-243 (324)
40 3h7r_A Aldo-keto reductase; st 100.0 4.8E-47 1.6E-51 315.2 12.7 182 1-207 34-253 (331)
41 3cf4_A Acetyl-COA decarboxylas 98.0 2.4E-06 8.2E-11 77.9 4.0 99 87-191 231-351 (807)
42 2rdx_A Mandelate racemase/muco 90.2 2.5 8.5E-05 34.8 10.1 146 22-189 145-300 (379)
43 2o56_A Putative mandelate race 90.0 6.2 0.00021 32.7 12.5 146 22-186 152-326 (407)
44 2nql_A AGR_PAT_674P, isomerase 89.4 4.6 0.00016 33.3 11.2 147 22-189 164-321 (388)
45 2ovl_A Putative racemase; stru 89.3 6.9 0.00024 32.0 12.2 144 22-186 146-302 (371)
46 3qtp_A Enolase 1; glycolysis, 89.3 9.2 0.00031 32.3 14.7 146 22-183 222-379 (441)
47 2poz_A Putative dehydratase; o 89.1 8.5 0.00029 31.7 13.7 146 22-186 137-310 (392)
48 3jva_A Dipeptide epimerase; en 88.8 8.4 0.00029 31.3 12.7 146 22-186 139-294 (354)
49 2qgy_A Enolase from the enviro 88.3 8.7 0.0003 31.7 12.2 145 22-185 149-304 (391)
50 3q45_A Mandelate racemase/muco 88.3 4.9 0.00017 33.0 10.6 149 22-189 140-298 (368)
51 2p8b_A Mandelate racemase/muco 87.7 4.1 0.00014 33.3 9.8 148 22-188 141-299 (369)
52 1tkk_A Similar to chloromucona 87.5 6.8 0.00023 31.9 11.0 148 22-188 140-300 (366)
53 3mwc_A Mandelate racemase/muco 86.8 7.9 0.00027 32.2 11.0 144 23-188 164-317 (400)
54 3r0u_A Enzyme of enolase super 86.3 13 0.00044 30.6 12.7 150 22-189 142-302 (379)
55 2ox4_A Putative mandelate race 86.3 13 0.00043 30.8 12.1 146 22-186 146-320 (403)
56 3dg3_A Muconate cycloisomerase 86.3 9.1 0.00031 31.3 11.1 148 22-189 139-298 (367)
57 3ozy_A Putative mandelate race 86.0 13 0.00046 30.6 12.5 144 22-184 151-305 (389)
58 1mdl_A Mandelate racemase; iso 86.0 13 0.00043 30.2 12.8 142 22-184 144-298 (359)
59 2pgw_A Muconate cycloisomerase 85.6 14 0.00047 30.4 12.9 146 22-188 147-303 (384)
60 2qde_A Mandelate racemase/muco 85.6 8.1 0.00028 31.9 10.5 149 22-189 145-303 (397)
61 3eez_A Putative mandelate race 85.1 4.4 0.00015 33.4 8.6 146 22-189 145-300 (378)
62 2og9_A Mandelate racemase/muco 84.5 12 0.00042 30.8 11.2 143 22-185 162-317 (393)
63 1nu5_A Chloromuconate cycloiso 84.3 15 0.00052 29.8 13.4 147 22-189 142-302 (370)
64 1sjd_A N-acylamino acid racema 83.9 16 0.00054 29.7 12.4 145 22-188 141-295 (368)
65 1kko_A 3-methylaspartate ammon 83.7 14 0.00048 30.8 11.2 87 99-186 268-361 (413)
66 2gl5_A Putative dehydratase pr 83.3 18 0.00062 29.9 12.9 146 22-186 150-329 (410)
67 2pp0_A L-talarate/galactarate 83.3 15 0.0005 30.4 11.1 143 22-185 175-330 (398)
68 3otr_A Enolase; structural gen 83.3 20 0.00068 30.4 12.3 147 22-184 226-383 (452)
69 3ro6_B Putative chloromuconate 83.1 7 0.00024 31.8 9.0 149 22-189 140-299 (356)
70 3gd6_A Muconate cycloisomerase 82.9 5 0.00017 33.2 8.1 150 22-189 142-301 (391)
71 2hzg_A Mandelate racemase/muco 82.2 20 0.00068 29.6 12.0 142 22-183 145-304 (401)
72 2qq6_A Mandelate racemase/muco 82.2 14 0.00049 30.6 10.7 146 22-186 149-321 (410)
73 4dwd_A Mandelate racemase/muco 81.0 18 0.00061 29.9 10.8 144 22-185 139-300 (393)
74 4h1z_A Enolase Q92ZS5; dehydra 80.8 19 0.00066 29.9 11.0 149 22-189 188-345 (412)
75 3ik4_A Mandelate racemase/muco 80.6 4.5 0.00016 33.1 6.9 87 98-189 214-302 (365)
76 1ydn_A Hydroxymethylglutaryl-C 80.2 5.8 0.0002 31.4 7.3 103 78-183 23-139 (295)
77 3bjs_A Mandelate racemase/muco 79.6 21 0.00073 29.8 10.9 141 24-183 187-338 (428)
78 2pju_A Propionate catabolism o 79.4 4 0.00014 31.2 5.8 98 83-183 48-160 (225)
79 2akz_A Gamma enolase, neural; 79.3 18 0.00061 30.5 10.3 96 78-182 270-368 (439)
80 3s5s_A Mandelate racemase/muco 79.1 4.6 0.00016 33.5 6.5 95 90-189 207-303 (389)
81 1nsj_A PRAI, phosphoribosyl an 79.0 9.6 0.00033 28.6 7.8 72 79-157 11-83 (205)
82 1chr_A Chloromuconate cycloiso 78.5 13 0.00044 30.4 9.1 86 100-189 215-302 (370)
83 1eye_A DHPS 1, dihydropteroate 77.0 25 0.00086 27.7 10.7 101 78-185 26-132 (280)
84 2q5c_A NTRC family transcripti 76.3 2.2 7.5E-05 31.8 3.5 68 111-183 78-148 (196)
85 2hxt_A L-fuconate dehydratase; 76.2 29 0.00099 29.0 10.8 142 22-182 198-350 (441)
86 1v5x_A PRA isomerase, phosphor 76.0 9.3 0.00032 28.6 6.9 65 91-157 17-82 (203)
87 1aj0_A DHPS, dihydropteroate s 75.8 27 0.00093 27.5 9.9 99 79-185 36-141 (282)
88 3fcp_A L-Ala-D/L-Glu epimerase 75.6 9.2 0.00032 31.4 7.4 73 117-189 233-307 (381)
89 1r0m_A N-acylamino acid racema 75.6 13 0.00045 30.3 8.4 145 22-188 148-301 (375)
90 3i4k_A Muconate lactonizing en 75.5 16 0.00056 29.9 8.9 149 22-189 148-308 (383)
91 1wuf_A Hypothetical protein LI 75.1 7.3 0.00025 32.2 6.7 87 99-189 227-315 (393)
92 2ozt_A TLR1174 protein; struct 75.1 27 0.00092 28.0 10.0 104 77-189 171-277 (332)
93 3u9i_A Mandelate racemase/muco 74.9 6.3 0.00021 32.7 6.2 96 89-189 235-332 (393)
94 2zad_A Muconate cycloisomerase 74.7 8.3 0.00028 31.1 6.8 151 22-189 139-297 (345)
95 1rvk_A Isomerase/lactonizing e 73.9 35 0.0012 27.8 12.9 144 22-184 149-310 (382)
96 2chr_A Chloromuconate cycloiso 72.8 6.9 0.00024 31.9 6.0 73 117-189 228-302 (370)
97 3stp_A Galactonate dehydratase 72.8 31 0.0011 28.7 10.0 144 22-184 179-339 (412)
98 1nvm_A HOA, 4-hydroxy-2-oxoval 72.5 10 0.00034 30.8 6.8 105 77-183 26-139 (345)
99 3rr1_A GALD, putative D-galact 72.3 40 0.0014 27.9 11.5 142 22-185 125-288 (405)
100 2ftp_A Hydroxymethylglutaryl-C 72.2 8.1 0.00028 30.7 6.1 102 78-182 27-142 (302)
101 3fv9_G Mandelate racemase/muco 71.8 12 0.00042 30.8 7.3 147 22-189 145-306 (386)
102 4e8g_A Enolase, mandelate race 69.1 20 0.00069 29.6 8.0 146 22-189 164-321 (391)
103 2ps2_A Putative mandelate race 68.8 11 0.00037 30.8 6.3 146 22-189 146-302 (371)
104 2zc8_A N-acylamino acid racema 68.4 15 0.00051 29.9 7.0 149 22-188 141-294 (369)
105 3dgb_A Muconate cycloisomerase 68.2 11 0.00039 30.9 6.3 86 100-189 221-308 (382)
106 2oz8_A MLL7089 protein; struct 67.8 49 0.0017 27.0 13.3 137 22-183 145-296 (389)
107 1kcz_A Beta-methylaspartase; b 67.6 34 0.0012 28.3 9.2 86 103-188 271-364 (413)
108 1tx2_A DHPS, dihydropteroate s 67.6 44 0.0015 26.6 9.4 87 93-185 74-167 (297)
109 3i6e_A Muconate cycloisomerase 67.2 18 0.00063 29.7 7.4 149 22-189 148-306 (385)
110 3tj4_A Mandelate racemase; eno 66.4 31 0.0011 28.1 8.6 144 22-184 151-306 (372)
111 2al1_A Enolase 1, 2-phospho-D- 66.3 57 0.002 27.3 10.3 96 78-182 273-371 (436)
112 2opj_A O-succinylbenzoate-COA 66.2 14 0.00048 29.7 6.4 83 99-189 150-233 (327)
113 1y80_A Predicted cobalamin bin 65.8 24 0.00081 26.1 7.2 156 22-185 15-179 (210)
114 4a35_A Mitochondrial enolase s 65.7 59 0.002 27.2 11.3 143 22-183 201-356 (441)
115 4hpn_A Putative uncharacterize 65.0 17 0.00058 29.7 6.8 81 99-183 214-296 (378)
116 3dip_A Enolase; structural gen 64.9 38 0.0013 28.0 9.0 82 100-185 240-324 (410)
117 4djd_D C/Fe-SP, corrinoid/iron 64.0 47 0.0016 26.8 8.9 98 83-186 82-189 (323)
118 3my9_A Muconate cycloisomerase 63.6 19 0.00065 29.5 6.8 149 22-189 146-305 (377)
119 1wue_A Mandelate racemase/muco 63.2 10 0.00035 31.2 5.1 87 99-189 227-315 (386)
120 3qy7_A Tyrosine-protein phosph 62.4 22 0.00075 27.6 6.6 150 22-184 18-193 (262)
121 3mkc_A Racemase; metabolic pro 62.1 25 0.00085 29.0 7.3 82 100-185 233-316 (394)
122 2qdd_A Mandelate racemase/muco 61.7 19 0.00066 29.4 6.5 143 22-189 145-300 (378)
123 3qld_A Mandelate racemase/muco 61.6 13 0.00043 30.8 5.4 88 98-189 214-303 (388)
124 2dqw_A Dihydropteroate synthas 61.2 31 0.0011 27.4 7.3 86 93-185 63-154 (294)
125 2p0o_A Hypothetical protein DU 60.6 43 0.0015 27.5 8.3 145 17-187 10-181 (372)
126 1uwk_A Urocanate hydratase; hy 60.2 22 0.00076 30.5 6.5 62 90-158 203-267 (557)
127 1ydo_A HMG-COA lyase; TIM-barr 60.2 16 0.00055 29.1 5.6 102 78-182 25-140 (307)
128 1tzz_A Hypothetical protein L1 59.3 72 0.0024 26.0 11.5 143 22-183 165-325 (392)
129 2ptz_A Enolase; lyase, glycoly 59.2 78 0.0027 26.4 10.6 96 79-183 273-373 (432)
130 3mqt_A Mandelate racemase/muco 59.2 26 0.0009 28.8 6.9 82 100-185 228-311 (394)
131 1qwg_A PSL synthase;, (2R)-pho 58.9 48 0.0017 25.7 7.8 98 84-182 25-132 (251)
132 2xvc_A ESCRT-III, SSO0910; cel 58.7 9.3 0.00032 22.5 2.8 20 111-130 37-56 (59)
133 2fkn_A Urocanate hydratase; ro 58.6 22 0.00076 30.4 6.2 62 90-158 199-263 (552)
134 1x87_A Urocanase protein; stru 58.5 22 0.00076 30.4 6.2 62 90-158 198-262 (551)
135 3qvq_A Phosphodiesterase OLEI0 58.3 44 0.0015 25.5 7.7 71 115-185 127-218 (252)
136 3ekg_A Mandelate racemase/muco 57.7 33 0.0011 28.5 7.3 82 99-184 236-321 (404)
137 4dye_A Isomerase; enolase fami 57.0 23 0.00079 29.3 6.2 144 23-187 169-322 (398)
138 3uj2_A Enolase 1; enzyme funct 56.5 80 0.0027 26.6 9.5 96 79-183 290-390 (449)
139 4dxk_A Mandelate racemase / mu 56.0 33 0.0011 28.3 7.0 83 100-186 237-321 (400)
140 3dxi_A Putative aldolase; TIM 56.0 77 0.0026 25.4 10.5 106 77-183 20-133 (320)
141 3sjn_A Mandelate racemase/muco 55.8 27 0.00091 28.5 6.4 143 24-185 148-304 (374)
142 3v5c_A Mandelate racemase/muco 55.5 25 0.00085 29.0 6.2 89 89-185 219-313 (392)
143 3ijw_A Aminoglycoside N3-acety 55.5 15 0.00051 28.9 4.5 50 84-133 17-72 (268)
144 2cw6_A Hydroxymethylglutaryl-C 55.4 18 0.00063 28.5 5.2 103 77-182 23-139 (298)
145 2fym_A Enolase; RNA degradosom 55.3 90 0.0031 25.9 11.5 100 78-186 267-371 (431)
146 3tqp_A Enolase; energy metabol 55.1 93 0.0032 26.0 10.2 99 77-184 262-365 (428)
147 1olt_A Oxygen-independent copr 55.1 27 0.00092 29.3 6.4 60 77-138 216-291 (457)
148 1pii_A N-(5'phosphoribosyl)ant 54.6 32 0.0011 29.2 6.7 63 92-158 272-335 (452)
149 2okt_A OSB synthetase, O-succi 54.5 12 0.00041 30.2 4.0 86 99-189 191-277 (342)
150 4h83_A Mandelate racemase/muco 54.4 31 0.0011 28.3 6.5 82 99-183 235-318 (388)
151 3ks6_A Glycerophosphoryl diest 54.4 34 0.0012 26.0 6.5 64 122-185 125-212 (250)
152 2nyg_A YOKD protein; PFAM02522 53.7 18 0.0006 28.5 4.7 47 84-130 15-67 (273)
153 3p3b_A Mandelate racemase/muco 53.4 29 0.001 28.5 6.3 78 99-183 227-311 (392)
154 4e4u_A Mandalate racemase/muco 53.3 51 0.0017 27.3 7.8 145 22-185 144-311 (412)
155 2pz0_A Glycerophosphoryl diest 52.9 26 0.00088 26.8 5.5 63 123-185 138-219 (252)
156 2yci_X 5-methyltetrahydrofolat 52.6 80 0.0027 24.6 9.3 101 79-189 32-137 (271)
157 3rfa_A Ribosomal RNA large sub 52.2 91 0.0031 25.9 9.0 87 102-188 232-349 (404)
158 1p1j_A Inositol-3-phosphate sy 52.2 67 0.0023 27.7 8.2 94 80-183 220-319 (533)
159 3sma_A FRBF; N-acetyl transfer 50.7 30 0.001 27.4 5.5 51 83-133 23-79 (286)
160 3l12_A Putative glycerophospho 50.4 44 0.0015 26.4 6.7 34 115-148 165-199 (313)
161 4djd_C C/Fe-SP, corrinoid/iron 50.3 48 0.0016 28.0 7.0 99 79-185 103-209 (446)
162 3toy_A Mandelate racemase/muco 50.1 35 0.0012 28.0 6.2 147 22-187 167-325 (383)
163 4h2h_A Mandelate racemase/muco 50.0 62 0.0021 26.3 7.7 90 91-189 216-307 (376)
164 2vef_A Dihydropteroate synthas 50.0 97 0.0033 24.7 9.6 96 83-184 32-136 (314)
165 3no3_A Glycerophosphodiester p 49.6 22 0.00076 27.0 4.6 70 116-185 116-204 (238)
166 2gdq_A YITF; mandelate racemas 49.3 65 0.0022 26.2 7.7 142 24-183 141-293 (382)
167 4e5t_A Mandelate racemase / mu 49.1 61 0.0021 26.7 7.6 145 22-185 151-318 (404)
168 4hnl_A Mandelate racemase/muco 49.1 14 0.00049 30.7 3.7 85 99-187 247-333 (421)
169 3r4e_A Mandelate racemase/muco 48.1 22 0.00076 29.6 4.8 99 78-186 231-331 (418)
170 3v3w_A Starvation sensing prot 48.1 25 0.00086 29.3 5.1 99 78-186 237-337 (424)
171 1wa3_A 2-keto-3-deoxy-6-phosph 47.7 77 0.0026 22.9 7.6 89 79-182 20-109 (205)
172 3va8_A Probable dehydratase; e 47.5 40 0.0014 28.4 6.2 92 89-189 254-347 (445)
173 1f6y_A 5-methyltetrahydrofolat 47.2 96 0.0033 23.9 9.4 100 79-185 23-124 (262)
174 2h9a_B CO dehydrogenase/acetyl 47.0 1.1E+02 0.0037 24.4 9.8 86 93-185 85-181 (310)
175 1gk8_I Ribulose bisphosphate c 46.8 72 0.0025 22.3 8.7 86 8-104 12-110 (140)
176 2pa6_A Enolase; glycolysis, ly 46.7 1.2E+02 0.0042 25.0 10.4 95 79-182 268-365 (427)
177 3sbf_A Mandelate racemase / mu 46.3 35 0.0012 28.1 5.7 99 78-186 212-312 (401)
178 1vko_A Inositol-3-phosphate sy 45.7 64 0.0022 27.8 7.1 93 80-182 224-322 (537)
179 3go2_A Putative L-alanine-DL-g 45.4 46 0.0016 27.5 6.2 69 116-184 250-319 (409)
180 3vdg_A Probable glucarate dehy 45.0 48 0.0017 27.8 6.4 91 89-188 256-348 (445)
181 1vd6_A Glycerophosphoryl diest 44.9 92 0.0032 23.0 9.2 146 24-185 22-194 (224)
182 4g8t_A Glucarate dehydratase; 44.8 14 0.00049 31.3 3.1 86 103-188 276-362 (464)
183 3ch0_A Glycerophosphodiester p 44.7 44 0.0015 25.6 5.7 65 121-185 160-244 (272)
184 1zcc_A Glycerophosphodiester p 44.7 33 0.0011 26.1 4.9 58 125-185 123-202 (248)
185 3ddm_A Putative mandelate race 44.7 44 0.0015 27.4 6.0 98 78-184 210-309 (392)
186 3rcy_A Mandelate racemase/muco 44.7 35 0.0012 28.5 5.5 145 22-185 146-313 (433)
187 2p3z_A L-rhamnonate dehydratas 44.4 47 0.0016 27.6 6.2 82 99-185 248-333 (415)
188 3rpe_A MDAB, modulator of drug 44.0 99 0.0034 23.2 8.4 96 24-121 100-209 (218)
189 2y5s_A DHPS, dihydropteroate s 43.9 42 0.0014 26.6 5.5 99 79-185 44-148 (294)
190 3ugv_A Enolase; enzyme functio 43.7 36 0.0012 28.0 5.3 147 22-187 171-331 (390)
191 1vp8_A Hypothetical protein AF 43.5 99 0.0034 23.0 7.4 87 102-189 18-110 (201)
192 3t6c_A RSPA, putative MAND fam 43.2 38 0.0013 28.4 5.5 82 100-185 267-350 (440)
193 1t57_A Conserved protein MTH16 43.1 1E+02 0.0035 23.0 7.4 88 101-189 25-117 (206)
194 1w6t_A Enolase; bacterial infe 43.0 1.4E+02 0.0048 24.9 9.0 96 78-182 279-379 (444)
195 2vp8_A Dihydropteroate synthas 43.0 82 0.0028 25.3 7.1 86 93-185 76-168 (318)
196 2ph5_A Homospermidine synthase 40.4 14 0.00047 31.7 2.2 21 25-45 95-115 (480)
197 2gwg_A 4-oxalomesaconate hydra 40.2 1.4E+02 0.0046 23.6 9.4 109 78-186 41-181 (350)
198 3tcs_A Racemase, putative; PSI 40.1 53 0.0018 27.0 5.8 98 78-185 210-309 (388)
199 3vc5_A Mandelate racemase/muco 39.9 49 0.0017 27.8 5.6 91 89-188 251-343 (441)
200 1v77_A PH1877P, hypothetical p 39.9 1.1E+02 0.0038 22.6 7.6 73 99-182 76-165 (212)
201 1ps9_A 2,4-dienoyl-COA reducta 39.7 1.9E+02 0.0066 25.3 10.9 93 59-156 209-309 (671)
202 3fxg_A Rhamnonate dehydratase; 39.7 42 0.0014 28.4 5.2 69 117-185 256-327 (455)
203 4hb7_A Dihydropteroate synthas 39.2 1.3E+02 0.0043 23.5 7.5 96 83-184 29-132 (270)
204 3lte_A Response regulator; str 39.0 43 0.0015 21.7 4.3 56 97-155 49-107 (132)
205 3vcn_A Mannonate dehydratase; 38.6 28 0.00097 29.0 4.0 99 78-186 238-338 (425)
206 2wqp_A Polysialic acid capsule 38.4 1.6E+02 0.0054 23.9 8.2 119 22-161 89-240 (349)
207 4exq_A UPD, URO-D, uroporphyri 38.2 1.3E+02 0.0045 24.3 7.9 90 30-125 266-357 (368)
208 3mz2_A Glycerophosphoryl diest 37.4 54 0.0018 25.8 5.2 65 121-185 149-236 (292)
209 3qn3_A Enolase; structural gen 37.3 1.8E+02 0.0061 24.2 10.2 100 78-186 261-365 (417)
210 3p6l_A Sugar phosphate isomera 37.3 33 0.0011 25.8 3.9 18 168-185 95-112 (262)
211 2jwk_A Protein TOLR; periplasm 36.8 24 0.00081 21.1 2.5 47 78-128 27-73 (74)
212 2oog_A Glycerophosphoryl diest 36.0 1.5E+02 0.0051 22.9 8.7 57 129-185 170-249 (287)
213 4e4f_A Mannonate dehydratase; 35.4 42 0.0014 28.0 4.5 82 100-185 255-338 (426)
214 2ab1_A Hypothetical protein; H 34.1 1.1E+02 0.0037 20.7 5.7 49 137-186 49-98 (122)
215 3p0w_A Mandelate racemase/muco 34.0 30 0.001 29.3 3.4 96 89-187 263-359 (470)
216 1tv8_A MOAA, molybdenum cofact 33.9 1.7E+02 0.0058 22.9 11.0 119 21-162 50-200 (340)
217 3pfr_A Mandelate racemase/muco 33.8 29 0.00099 29.3 3.3 95 89-186 248-343 (455)
218 3tji_A Mandelate racemase/muco 33.7 33 0.0011 28.6 3.6 99 78-186 233-333 (422)
219 3nhm_A Response regulator; pro 33.4 48 0.0016 21.4 3.9 57 97-156 46-105 (133)
220 3ijl_A Muconate cycloisomerase 33.4 66 0.0022 25.8 5.2 85 99-189 200-286 (338)
221 3k13_A 5-methyltetrahydrofolat 33.2 1.8E+02 0.0061 23.0 10.3 105 79-189 35-145 (300)
222 2q3l_A Uncharacterized protein 33.1 86 0.0029 21.1 5.1 60 80-139 35-95 (126)
223 1jbe_A Chemotaxis protein CHEY 32.5 97 0.0033 19.7 7.2 64 92-158 43-110 (128)
224 2r14_A Morphinone reductase; H 32.3 82 0.0028 25.7 5.7 69 85-156 258-327 (377)
225 3eeg_A 2-isopropylmalate synth 32.0 1.9E+02 0.0066 23.0 7.9 97 85-187 31-145 (325)
226 3lmz_A Putative sugar isomeras 31.8 30 0.001 26.1 2.8 18 168-185 93-110 (257)
227 2pge_A MENC; OSBS, NYSGXRC, PS 31.7 27 0.00094 28.5 2.7 86 100-189 235-324 (377)
228 3mzn_A Glucarate dehydratase; 31.3 32 0.0011 29.0 3.1 95 89-186 245-340 (450)
229 3vni_A Xylose isomerase domain 30.8 44 0.0015 25.5 3.7 19 168-186 51-70 (294)
230 3ec1_A YQEH GTPase; atnos1, at 30.8 2.1E+02 0.0072 23.0 9.9 112 23-141 58-177 (369)
231 3cpk_A Uncharacterized protein 30.4 1.3E+02 0.0046 21.2 5.8 37 150-186 88-124 (150)
232 2w9m_A Polymerase X; SAXS, DNA 30.1 1.9E+02 0.0065 25.0 8.0 83 99-185 420-516 (578)
233 4h62_V Mediator of RNA polymer 29.2 28 0.00097 16.9 1.4 17 132-148 4-20 (31)
234 1vyr_A Pentaerythritol tetrani 28.9 2.3E+02 0.0078 22.9 8.1 67 86-156 255-322 (364)
235 4gim_A Pseudouridine-5'-phosph 28.7 2.3E+02 0.0079 22.8 7.7 70 2-95 205-283 (335)
236 1u83_A Phosphosulfolactate syn 28.7 2.1E+02 0.007 22.5 7.0 96 84-182 52-156 (276)
237 3caw_A O-succinylbenzoate synt 28.6 81 0.0028 25.0 5.0 90 89-189 167-257 (330)
238 2gou_A Oxidoreductase, FMN-bin 28.4 1.1E+02 0.0036 24.9 5.7 69 85-157 253-322 (365)
239 1z41_A YQJM, probable NADH-dep 28.3 1.5E+02 0.005 23.6 6.5 94 59-156 210-306 (338)
240 2f6k_A Metal-dependent hydrola 28.0 2E+02 0.0068 21.8 9.2 72 116-187 76-158 (307)
241 1ub3_A Aldolase protein; schif 27.7 1.6E+02 0.0054 22.1 6.2 133 18-157 13-153 (220)
242 3kht_A Response regulator; PSI 27.3 1.3E+02 0.0045 19.6 5.7 66 90-158 43-112 (144)
243 1vli_A Spore coat polysacchari 27.1 1.8E+02 0.006 24.0 6.8 120 22-161 99-252 (385)
244 3s21_A 3-oxoacyl-[ACP] synthas 27.0 96 0.0033 24.7 5.2 27 82-108 247-275 (345)
245 2otd_A Glycerophosphodiester p 26.9 2E+02 0.0068 21.5 7.8 19 167-185 197-215 (247)
246 1q7z_A 5-methyltetrahydrofolat 26.5 2.8E+02 0.0097 24.0 8.3 100 77-184 336-438 (566)
247 3rfa_A Ribosomal RNA large sub 26.3 2.6E+02 0.0091 23.0 7.8 115 75-190 140-285 (404)
248 3cyj_A Mandelate racemase/muco 26.1 2.5E+02 0.0087 22.5 9.9 100 77-187 198-301 (372)
249 2p10_A MLL9387 protein; putati 25.9 54 0.0018 25.9 3.3 109 21-138 11-129 (286)
250 3ktc_A Xylose isomerase; putat 25.7 25 0.00085 27.9 1.4 46 2-47 6-57 (333)
251 3gr7_A NADPH dehydrogenase; fl 25.5 2.3E+02 0.0079 22.6 7.2 95 59-157 210-307 (340)
252 3ix3_A Transcriptional activat 25.4 1.7E+02 0.0059 20.3 6.0 82 77-178 13-110 (173)
253 3mcm_A 2-amino-4-hydroxy-6-hyd 25.4 2.4E+02 0.0081 23.7 7.4 102 78-185 209-323 (442)
254 3obi_A Formyltetrahydrofolate 25.4 2.4E+02 0.0083 22.0 8.2 145 26-186 20-175 (288)
255 1v0l_A Endo-1,4-beta-xylanase 25.0 1E+02 0.0034 24.5 4.9 106 79-187 147-270 (313)
256 3g8r_A Probable spore coat pol 25.0 2.8E+02 0.0094 22.5 8.7 121 21-162 75-230 (350)
257 2lpm_A Two-component response 24.9 1.1E+02 0.0038 20.4 4.5 49 138-187 41-89 (123)
258 3o9z_A Lipopolysaccaride biosy 24.7 1.8E+02 0.0061 22.7 6.3 60 79-147 55-117 (312)
259 2o55_A Putative glycerophospho 24.6 1.4E+02 0.0048 22.5 5.6 63 123-185 135-220 (258)
260 3hgj_A Chromate reductase; TIM 24.6 1.7E+02 0.0059 23.4 6.3 95 59-157 220-318 (349)
261 2xig_A Ferric uptake regulatio 24.5 94 0.0032 21.6 4.2 27 110-136 58-84 (150)
262 1mli_A Muconolactone isomerase 24.5 1.3E+02 0.0046 19.5 4.5 49 117-165 28-88 (96)
263 1r3s_A URO-D, uroporphyrinogen 24.5 2.3E+02 0.0077 22.7 7.1 80 30-116 269-350 (367)
264 1icp_A OPR1, 12-oxophytodienoa 24.0 90 0.0031 25.5 4.5 69 85-156 259-329 (376)
265 2ksn_A Ubiquitin domain-contai 23.9 16 0.00055 25.4 -0.1 10 39-48 44-53 (137)
266 4ggi_A UDP-2,3-diacylglucosami 23.9 94 0.0032 24.3 4.4 19 81-99 108-126 (283)
267 2ps2_A Putative mandelate race 23.9 2.8E+02 0.0095 22.2 8.4 118 80-206 173-291 (371)
268 2jya_A AGR_C_3324P, uncharacte 23.8 42 0.0014 22.4 2.0 22 166-187 61-82 (106)
269 2i7g_A Monooxygenase, AGR_C_41 23.8 2E+02 0.007 23.1 6.7 20 79-98 310-329 (376)
270 3ri6_A O-acetylhomoserine sulf 23.7 3E+02 0.01 22.5 10.4 88 99-191 121-211 (430)
271 3s83_A Ggdef family protein; s 23.7 96 0.0033 23.3 4.4 81 113-196 138-243 (259)
272 3mwm_A ZUR, putative metal upt 23.7 99 0.0034 21.1 4.1 28 109-136 44-71 (139)
273 2b0l_A GTP-sensing transcripti 23.6 1.5E+02 0.0052 19.0 4.9 35 113-147 57-98 (102)
274 3gka_A N-ethylmaleimide reduct 23.4 1.7E+02 0.0058 23.7 6.0 63 85-156 253-315 (361)
275 3noy_A 4-hydroxy-3-methylbut-2 23.4 2.3E+02 0.0079 23.1 6.6 93 78-182 43-138 (366)
276 1wv2_A Thiazole moeity, thiazo 23.0 2.7E+02 0.0092 21.7 11.5 105 76-182 82-192 (265)
277 4ets_A Ferric uptake regulatio 22.9 47 0.0016 23.6 2.3 27 109-135 65-91 (162)
278 2r6o_A Putative diguanylate cy 22.9 2.7E+02 0.0091 21.6 8.2 111 81-196 129-267 (294)
279 2o03_A Probable zinc uptake re 22.8 93 0.0032 20.9 3.8 28 109-136 41-68 (131)
280 3il3_A 3-oxoacyl-[acyl-carrier 22.7 1.2E+02 0.0041 23.9 4.9 26 83-108 226-253 (323)
281 1qbj_A Protein (double-strande 22.7 78 0.0027 19.7 3.1 22 112-133 40-61 (81)
282 2pfu_A Biopolymer transport EX 22.6 1.1E+02 0.0039 19.1 4.0 29 107-136 64-92 (99)
283 2oda_A Hypothetical protein ps 22.6 2.1E+02 0.0073 20.3 6.6 33 113-146 38-70 (196)
284 3eyy_A Putative iron uptake re 22.5 91 0.0031 21.5 3.7 52 83-136 20-75 (145)
285 3gt7_A Sensor protein; structu 22.5 1.8E+02 0.006 19.3 7.3 67 90-159 43-113 (154)
286 3guv_A Site-specific recombina 22.5 86 0.003 21.9 3.7 44 85-128 60-106 (167)
287 2fe3_A Peroxide operon regulat 22.5 93 0.0032 21.4 3.8 28 109-136 52-79 (145)
288 3l5l_A Xenobiotic reductase A; 22.4 2.4E+02 0.0082 22.7 6.8 70 87-156 251-324 (363)
289 4dfe_A 3-oxoacyl-[acyl-carrier 22.2 1.4E+02 0.005 23.4 5.4 28 81-108 234-263 (333)
290 3pzt_A Endoglucanase; alpha/be 22.0 1.3E+02 0.0045 23.7 5.1 45 138-182 70-123 (327)
291 4f3h_A Fimxeal, putative uncha 22.0 1E+02 0.0034 23.1 4.2 69 113-184 142-220 (250)
292 3vnd_A TSA, tryptophan synthas 21.9 2.8E+02 0.0095 21.4 8.0 65 115-181 81-152 (267)
293 3aii_A Glutamyl-tRNA synthetas 21.8 1.9E+02 0.0067 25.0 6.3 61 80-148 144-204 (553)
294 3va8_A Probable dehydratase; e 21.7 3.5E+02 0.012 22.5 9.2 146 21-206 190-336 (445)
295 1a6f_A RNAse P protein, ribonu 21.6 1.5E+02 0.0052 19.7 4.6 62 54-126 44-109 (119)
296 3gwa_A 3-oxoacyl-(acyl-carrier 21.6 1.4E+02 0.0048 24.0 5.2 28 81-108 266-295 (365)
297 2heo_A Z-DNA binding protein 1 21.6 91 0.0031 18.3 3.1 21 111-131 37-57 (67)
298 3vdg_A Probable glucarate dehy 21.5 3.5E+02 0.012 22.5 9.6 146 21-206 192-338 (445)
299 3cnb_A DNA-binding response re 21.4 1.7E+02 0.0058 18.8 5.6 59 97-158 53-115 (143)
300 3aty_A Tcoye, prostaglandin F2 21.3 2.9E+02 0.01 22.4 7.1 63 86-156 270-335 (379)
301 1i1w_A Endo-1,4-beta-xylanase; 21.2 3E+02 0.01 21.5 7.3 104 79-186 149-270 (303)
302 2w6k_A COBE; biosynthetic prot 21.2 1.9E+02 0.0065 20.1 5.2 62 77-145 21-82 (145)
303 3l8h_A Putative haloacid dehal 21.1 1.4E+02 0.0049 20.5 4.7 17 112-128 28-44 (179)
304 4ab4_A Xenobiotic reductase B; 21.0 2.1E+02 0.0071 23.2 6.1 63 85-156 245-307 (362)
305 1nzj_A Hypothetical protein YA 21.0 1.8E+02 0.0063 22.8 5.6 58 81-145 54-111 (298)
306 3vp6_A Glutamate decarboxylase 20.9 3.7E+02 0.013 22.5 9.9 65 128-192 218-293 (511)
307 3h2y_A GTPase family protein; 20.7 3.3E+02 0.011 21.8 10.7 112 23-141 56-175 (368)
308 3t6k_A Response regulator rece 20.7 1.8E+02 0.0061 18.8 5.9 59 97-158 47-109 (136)
309 3i71_A Ethanolamine utilizatio 20.6 1E+02 0.0035 18.0 2.9 23 111-133 30-52 (68)
310 2lnb_A Z-DNA-binding protein 1 20.6 85 0.0029 19.6 2.8 53 81-137 18-72 (80)
311 3gl9_A Response regulator; bet 20.6 1.7E+02 0.0058 18.4 6.5 64 91-157 39-106 (122)
312 4had_A Probable oxidoreductase 20.5 1.7E+02 0.0057 23.0 5.4 83 120-206 40-138 (350)
313 3b9o_A Alkane monoxygenase; LA 20.5 1.6E+02 0.0055 24.4 5.5 49 79-130 355-404 (440)
314 1lt8_A Betaine-homocysteine me 20.4 3.6E+02 0.012 22.2 12.2 156 22-184 52-248 (406)
315 2cfo_A Glutamyl-tRNA synthetas 20.4 4E+02 0.014 22.6 7.9 60 80-146 49-108 (492)
316 1ta3_B Endo-1,4-beta-xylanase; 20.3 2E+02 0.0067 22.6 5.7 104 80-186 149-271 (303)
317 2qul_A D-tagatose 3-epimerase; 20.3 99 0.0034 23.3 3.9 42 144-185 24-68 (290)
318 1qgp_A Protein (double strande 20.2 1E+02 0.0035 18.7 3.2 22 112-133 44-65 (77)
No 1
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=1.5e-53 Score=352.06 Aligned_cols=193 Identities=29% Similarity=0.461 Sum_probs=173.8
Q ss_pred CCcCcccccccccccC--CCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAF--YGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~--~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------~~i~tK~~~~~ 69 (208)
++||.||||||++|+. |+ ..+++++.++|+.|+++|||+||||+.||+|.||+.+|+ +||+||++.+.
T Consensus 11 ~~vs~lglGt~~~g~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~~i~TK~g~~~ 89 (312)
T 1pyf_A 11 LQVFPIGLGTNAVGGHNLYP-NLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRK 89 (312)
T ss_dssp CEECSBCEECTTSSCTTTCS-SCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEEEEEECEEE
T ss_pred CcccCEeEeccccCCCCCCC-CCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeEEEEEEeCCCC
Confidence 4689999999999864 43 247788999999999999999999999999999999998 99999986332
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcC
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIH 149 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~ 149 (208)
.++.+..+.+++.+++++++||++|||||||+|++|||++..+.+++|++|++|+++||||+||||||++++++++++..
T Consensus 90 ~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 169 (312)
T 1pyf_A 90 QGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDG 169 (312)
T ss_dssp ETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTTS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhhC
Confidence 12222236789999999999999999999999999999988899999999999999999999999999999999999998
Q ss_pred CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 150 PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 150 ~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
+|+++|++||++++..+.+++++|+++||++++|+||++|+|+++
T Consensus 170 ~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~ 214 (312)
T 1pyf_A 170 LVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGK 214 (312)
T ss_dssp CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTC
T ss_pred CceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCC
Confidence 999999999999997766899999999999999999999998764
No 2
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=2.3e-53 Score=355.57 Aligned_cols=193 Identities=30% Similarity=0.484 Sum_probs=176.1
Q ss_pred CCcCcccccccccccC-CCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce--------EEEEeecceec--
Q 040616 1 LEVSGQGLRCMGMFAF-YGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR--------VKLTTKFGIRY-- 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~--------~~i~tK~~~~~-- 69 (208)
++||.||||||++|+. |+. .+++++.++|+.|+++|||+||||+.||+|.||+.+|+ +||+||++..+
T Consensus 29 ~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~g~~~~~ 107 (348)
T 3n2t_A 29 TPLSRVALGTWAIGGWMWGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAEKPNKAHVATKLGLHWVG 107 (348)
T ss_dssp SCEESEEEECTTSSCSSSCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHSCCCCEEEEEECEEEES
T ss_pred CccCCEeEeCccccCCCCCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhhCCCeEEEEEeecCCCcC
Confidence 4799999999999863 554 47788999999999999999999999999999999997 99999997644
Q ss_pred CCC---CccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHh
Q 040616 70 EDG---KYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAH 146 (208)
Q Consensus 70 ~~~---~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 146 (208)
.++ ....+.+++.+++++++||++|||||||+|++|||++..+.+++|++|++|+++||||+||||||+++++++++
T Consensus 108 ~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~ 187 (348)
T 3n2t_A 108 EDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFR 187 (348)
T ss_dssp SSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHH
T ss_pred CCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHH
Confidence 122 22345789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 147 TIHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 147 ~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
+..+|+++|++||++++..+.+++++|+++||++++|+||++|+|+++
T Consensus 188 ~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~ 235 (348)
T 3n2t_A 188 EVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGK 235 (348)
T ss_dssp HHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTC
T ss_pred HhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCC
Confidence 999999999999999998778999999999999999999999998764
No 3
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.2e-53 Score=356.08 Aligned_cols=193 Identities=55% Similarity=0.900 Sum_probs=171.7
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCC-Cchhhhcce---------EEEEeecceecC
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGP-HTNEILLAR---------VKLTTKFGIRYE 70 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~e~~~g~---------~~i~tK~~~~~~ 70 (208)
++||.||||||++|+.|+...+++++.++|+.|+++|||+||||+.||. |.||+.+|+ +||+||++....
T Consensus 11 ~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~i~TK~~~~~~ 90 (337)
T 3v0s_A 11 LEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQVGTKFGIHEI 90 (337)
T ss_dssp CEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCEEEEEECEEEE
T ss_pred ceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceEEEeeeccccC
Confidence 4699999999999887886668889999999999999999999999997 689999997 999999987542
Q ss_pred -CCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcC
Q 040616 71 -DGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIH 149 (208)
Q Consensus 71 -~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~ 149 (208)
.+....+.+++.+++++++||++||+||||+|++|||++..+.+++|++|++|+++||||+||||||++++++++++..
T Consensus 91 ~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 170 (337)
T 3v0s_A 91 GFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVH 170 (337)
T ss_dssp ETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS
T ss_pred CCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhccC
Confidence 1223346789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCC
Q 040616 150 PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSS 193 (208)
Q Consensus 150 ~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~ 193 (208)
+++++|++||++++..+.+++++|+++||++++|+||++|+|++
T Consensus 171 ~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g 214 (337)
T 3v0s_A 171 PVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWG 214 (337)
T ss_dssp CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHH
T ss_pred CceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCC
Confidence 99999999999999776799999999999999999999998763
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=5.2e-53 Score=351.63 Aligned_cols=193 Identities=31% Similarity=0.470 Sum_probs=174.0
Q ss_pred CCcCcccccccccccC-CCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAF-YGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~----------~~i~tK~~~~~ 69 (208)
++||.||||||++|+. |+ ..+++++.++|+.|+++|||+||||+.||+|.||+.+|+ +||+||++..+
T Consensus 11 ~~vs~lglGt~~~g~~~~g-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~~i~TK~~~~~ 89 (333)
T 1pz1_A 11 IEASRIGLGTWAIGGTMWG-GTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVILATKTALDW 89 (333)
T ss_dssp CEEESEEEECTGGGCTTTT-CCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCEEEEEECEEE
T ss_pred CcccCEeEechhhcCCcCC-CCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeEEEEEeeCccC
Confidence 4689999999999864 65 347788999999999999999999999999999999987 89999998332
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcC
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIH 149 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~ 149 (208)
..+.+..+.+++.+++++++||++|||||||+|++|||++..+.+++|++|++|+++||||+||||||++++++++++..
T Consensus 90 ~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 169 (333)
T 1pz1_A 90 KNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVA 169 (333)
T ss_dssp SSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTTS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhcC
Confidence 11111125689999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 150 PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 150 ~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
+|+++|++||++++..+.+++++|+++||++++|+||++|.|+++
T Consensus 170 ~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~ 214 (333)
T 1pz1_A 170 PLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGK 214 (333)
T ss_dssp CCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSC
T ss_pred CcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCC
Confidence 999999999999997667999999999999999999999998764
No 5
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=6.4e-52 Score=346.76 Aligned_cols=191 Identities=28% Similarity=0.475 Sum_probs=169.5
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCC--Cchhhhcce------------EEEEeecc
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGP--HTNEILLAR------------VKLTTKFG 66 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~~e~~~g~------------~~i~tK~~ 66 (208)
++||.||||||.. ++...+++++.++|+.|+++|||+||||+.||+ |.||+.+|+ +||+||++
T Consensus 23 ~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~~~I~TK~g 99 (346)
T 3n6q_A 23 LRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAG 99 (346)
T ss_dssp CEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHCTTTGGGCEEEEEEC
T ss_pred CeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhhcccccccEEEEEEec
Confidence 4699999999864 344557888999999999999999999999998 889999986 99999987
Q ss_pred eecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHh
Q 040616 67 IRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAH 146 (208)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 146 (208)
....++......+++.+++++++||++|||||||+|++|||++..+++++|++|++|+++||||+||||||+++++++++
T Consensus 100 ~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~ 179 (346)
T 3n6q_A 100 YDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMV 179 (346)
T ss_dssp SCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHH
T ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHH
Confidence 54322222234489999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hc-----CCccEEeeccCcCCCCccc-cHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 147 TI-----HPITVVRLEWSLRSRDVEE-EIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 147 ~~-----~~~~~~q~~~~~~~~~~~~-~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
+. .+++++|++||++++..+. +++++|+++||++++|+||++|+|+++
T Consensus 180 ~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~ 233 (346)
T 3n6q_A 180 ELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK 233 (346)
T ss_dssp HHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTS
T ss_pred HHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCC
Confidence 64 6789999999999997665 899999999999999999999998764
No 6
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=9e-52 Score=346.59 Aligned_cols=191 Identities=31% Similarity=0.488 Sum_probs=169.9
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCC--Cchhhhcce------------EEEEeecc
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGP--HTNEILLAR------------VKLTTKFG 66 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~~e~~~g~------------~~i~tK~~ 66 (208)
++||.||||||+. |+...+.+++.++|+.|+++|||+||||+.||+ |.||+.+|+ +||+||++
T Consensus 44 ~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g 120 (353)
T 3erp_A 44 VKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAG 120 (353)
T ss_dssp CEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEES
T ss_pred CccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeec
Confidence 4699999999943 334557888999999999999999999999998 899999885 99999997
Q ss_pred eecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHh
Q 040616 67 IRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAH 146 (208)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 146 (208)
....++......+++.+++++++||++|||||||+|++|||++..+++++|++|++|+++||||+||||||+++++++++
T Consensus 121 ~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~ 200 (353)
T 3erp_A 121 YTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAI 200 (353)
T ss_dssp SCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHH
T ss_pred cCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHH
Confidence 54322222233589999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hc-----CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 147 TI-----HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 147 ~~-----~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
+. .+|+++|++||++++..+.+++++|+++||++++|+||++|+|+++
T Consensus 201 ~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~ 253 (353)
T 3erp_A 201 DILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDR 253 (353)
T ss_dssp HHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGG
T ss_pred HHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCC
Confidence 64 6899999999999998777899999999999999999999998754
No 7
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=7.4e-52 Score=342.63 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=182.3
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||++|+ | ..+++++.++|+.|+++|||+||||+.||+|.||+.+|+ +||+||++...
T Consensus 33 ~~vs~lglGt~~~g~-~--~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~ 109 (319)
T 1ur3_M 33 PEFSRFVMGYWRLMD-W--NMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIAT 109 (319)
T ss_dssp CEEESSEEECTTTTT-T--TCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTCEEEEEECEEC
T ss_pred cccccccEeccccCC-C--CCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeEEEEEeeccCC
Confidence 468999999999976 4 346788999999999999999999999999999999998 99999998643
Q ss_pred CCC----CccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHH
Q 040616 70 EDG----KYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRA 145 (208)
Q Consensus 70 ~~~----~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~ 145 (208)
... ....+.+++.+++++++||++||+||||+|++|||++..+.+++|++|++|+++||||+||||||++++++++
T Consensus 110 ~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 189 (319)
T 1ur3_M 110 TAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALL 189 (319)
T ss_dssp TTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEESCCHHHHHHH
T ss_pred CCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCCHHHHHHH
Confidence 210 0123678999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred hhcC--CccEEeeccCcCCCCc-cccHHHHHHHhCCcEEEcccCcccccCCC-------CCcccchhhcCCCC
Q 040616 146 HTIH--PITVVRLEWSLRSRDV-EEEIVPTCRELGIGIVAYSLLGRGFLSSG-------PKLIHLSATKGCIS 208 (208)
Q Consensus 146 ~~~~--~~~~~q~~~~~~~~~~-~~~~l~~~~~~gi~v~a~~pl~~G~l~~~-------~~~~~~a~~~~~~~ 208 (208)
.+.. +|+++|++||++++.. +.+++++|+++||++++|+||++|.|..+ ..+.++|+++|+|+
T Consensus 190 ~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~l~~ia~~~g~t~ 262 (319)
T 1ur3_M 190 QSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRDELAVVAEELNAGS 262 (319)
T ss_dssp HTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSCGGGHHHHHHHHHHHHHTTCSC
T ss_pred HHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCCchhHHHHHHHHHHHHHcCCCh
Confidence 8863 7999999999999974 35799999999999999999999998754 56788999999974
No 8
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=2.8e-51 Score=338.94 Aligned_cols=187 Identities=30% Similarity=0.490 Sum_probs=164.5
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce--------EEEEeecceecCCC
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR--------VKLTTKFGIRYEDG 72 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~--------~~i~tK~~~~~~~~ 72 (208)
++||.||||||++|. +.+++.++|+.|+++|||+||||+.||+|.||+.+|+ +||+||++.....+
T Consensus 31 ~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~~~~~~~~ 104 (317)
T 1ynp_A 31 LHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGRRQDIILATKVGNRFEQG 104 (317)
T ss_dssp CEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTTCGGGCEEEEEC-------
T ss_pred CcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCeEEEEeeeCCCcCCC
Confidence 468999999999853 4578999999999999999999999999999999998 99999998654221
Q ss_pred --CccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCC
Q 040616 73 --KYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHP 150 (208)
Q Consensus 73 --~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~ 150 (208)
.+..+.+++.+++++++||++||+||||+|++|||+...+.+++|++|++|+++||||+||||||++++++++++..+
T Consensus 105 ~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 184 (317)
T 1ynp_A 105 KEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSN 184 (317)
T ss_dssp --------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHHSC
T ss_pred CccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhcCC
Confidence 123467899999999999999999999999999999888899999999999999999999999999999999999988
Q ss_pred ccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 151 ITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 151 ~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
|+++|++||++++..+. ++++|+++||++++|+||++|.|+++
T Consensus 185 ~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~ 227 (317)
T 1ynp_A 185 IVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR 227 (317)
T ss_dssp CCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS
T ss_pred CEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC
Confidence 99999999999997554 99999999999999999999999865
No 9
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=1.8e-51 Score=341.59 Aligned_cols=190 Identities=24% Similarity=0.339 Sum_probs=168.5
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||.. ||...+++++.++|++|+++|||+||||+.||+|.||+.+|+ +||+||+++..
T Consensus 13 ~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~ 89 (327)
T 3eau_A 13 LRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGG 89 (327)
T ss_dssp CEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBCC
T ss_pred CcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCeEEEEEeecCCC
Confidence 4699999999843 344567888999999999999999999999999999999997 89999986422
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI- 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 148 (208)
......+.+++.+++++++||++|||||||+|++|||++..+++++|++|++|+++||||+||||||+++++.++.+.
T Consensus 90 -~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 168 (327)
T 3eau_A 90 -KAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVA 168 (327)
T ss_dssp -SSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHH
Confidence 112234678999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred -----CCccEEeeccCcCCCCc-cccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 149 -----HPITVVRLEWSLRSRDV-EEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 149 -----~~~~~~q~~~~~~~~~~-~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
.+|+++|++||++++.. +.+++++|+++||++++|+||++|.|+++
T Consensus 169 ~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~ 220 (327)
T 3eau_A 169 RQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 220 (327)
T ss_dssp HHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTT
T ss_pred HHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCc
Confidence 58999999999999853 34799999999999999999999999764
No 10
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-51 Score=345.39 Aligned_cols=190 Identities=24% Similarity=0.339 Sum_probs=169.0
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||.. ||...+++++.++|+.|+++|||+||||+.||+|.||+.+|+ +||+||+++..
T Consensus 47 ~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~ 123 (367)
T 3lut_A 47 LRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGG 123 (367)
T ss_dssp CEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBCC
T ss_pred CcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCceEEEEeccccCC
Confidence 4689999999853 344567888999999999999999999999999999999997 99999996432
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI- 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 148 (208)
......+.+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++||||+||||||+++++++++..
T Consensus 124 -~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 202 (367)
T 3lut_A 124 -KAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVA 202 (367)
T ss_dssp -SSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred -CCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHH
Confidence 111234678999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred -----CCccEEeeccCcCCCCc-cccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 149 -----HPITVVRLEWSLRSRDV-EEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 149 -----~~~~~~q~~~~~~~~~~-~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
.+|+++|++||++++.. +.+++++|+++||++++|+||++|+|+++
T Consensus 203 ~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk 254 (367)
T 3lut_A 203 RQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 254 (367)
T ss_dssp HHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTT
T ss_pred HHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCC
Confidence 58999999999999964 44899999999999999999999999864
No 11
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=1.2e-50 Score=336.62 Aligned_cols=184 Identities=29% Similarity=0.353 Sum_probs=167.5
Q ss_pred CcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceecC
Q 040616 2 EVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRYE 70 (208)
Q Consensus 2 ~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~~ 70 (208)
.+|+||||||++|. ..+++++.++|+.|+++|||+||||+.||.|.||+.+|+ +||+||+++..
T Consensus 4 ~~~~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~- 78 (327)
T 1gve_A 4 ARPATVLGAMEMGR----RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMF- 78 (327)
T ss_dssp CCCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCT-
T ss_pred CCCCeEEcccccCC----CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCC-
Confidence 47899999999864 246788999999999999999999999998899999997 89999996431
Q ss_pred CCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc--
Q 040616 71 DGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI-- 148 (208)
Q Consensus 71 ~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-- 148 (208)
..+.+++.+++++++||++|||||||+|++|||++..+++++|++|++|+++||||+||||||+.++++++++.
T Consensus 79 ----~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 154 (327)
T 1gve_A 79 ----GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCK 154 (327)
T ss_dssp ----TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence 12578999999999999999999999999999999889999999999999999999999999999999988764
Q ss_pred ----CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 149 ----HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 149 ----~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
.+|+++|++||++++..+.+++++|+++||++++|+||++|.|+++
T Consensus 155 ~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~ 204 (327)
T 1gve_A 155 KNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGR 204 (327)
T ss_dssp HHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTC
T ss_pred HcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCc
Confidence 5799999999999997667999999999999999999999998765
No 12
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.8e-51 Score=332.61 Aligned_cols=187 Identities=24% Similarity=0.441 Sum_probs=175.2
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||++..
T Consensus 32 ~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~I~TK~~~~- 99 (298)
T 3up8_A 32 ANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRADVFLTTKVWVD- 99 (298)
T ss_dssp CCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGGGCEEEEEECGG-
T ss_pred eecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChHHEEEEeccCCC-
Confidence 4799999999987 457899999999999999999999999 8999997 9999999853
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcC
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIH 149 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~ 149 (208)
+.+++.+++++++||++||+||||+|++|||++..+.+++|++|++|+++|+||+||||||++++++++++..
T Consensus 100 -------~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 172 (298)
T 3up8_A 100 -------NYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLS 172 (298)
T ss_dssp -------GCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHC
T ss_pred -------CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhC
Confidence 4789999999999999999999999999999998899999999999999999999999999999999998873
Q ss_pred --CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCCCC
Q 040616 150 --PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGCIS 208 (208)
Q Consensus 150 --~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~~~ 208 (208)
+|+++|++||++.+ +.+++++|+++||++++|+||++|.+..++.+.++|+++|+|.
T Consensus 173 ~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~ia~~~g~s~ 231 (298)
T 3up8_A 173 DAPIATNQVEYHPYLD--QTKVLQTARRLGMSLTSYYAMANGKVPADPLLTEIGGRHGKTA 231 (298)
T ss_dssp SSCEEEEEEECBTTBC--CHHHHHHHHHHTCEEEEECTTGGGHHHHCHHHHHHHHHHTCCH
T ss_pred CCCceEEEEecccccc--cHHHHHHHHHCCCEEEEECCCcCCcccccchHHHHHHHcCCCH
Confidence 79999999999998 6799999999999999999999999888899999999999873
No 13
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=2.4e-50 Score=338.66 Aligned_cols=184 Identities=29% Similarity=0.367 Sum_probs=167.3
Q ss_pred CcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceecC
Q 040616 2 EVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRYE 70 (208)
Q Consensus 2 ~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~~ 70 (208)
.+|.||||||++|. ..+++++.++|+.|+++|||+||||+.||.|.||+.+|+ +||+||+++..
T Consensus 37 ~ip~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK~~~~~- 111 (360)
T 2bp1_A 37 PRVASVLGTMEMGR----RMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKANPWD- 111 (360)
T ss_dssp -CCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEEECCCT-
T ss_pred CCCCEEECchhhCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEeeecCCC-
Confidence 58999999999864 236788999999999999999999999998899999997 89999996431
Q ss_pred CCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc--
Q 040616 71 DGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI-- 148 (208)
Q Consensus 71 ~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-- 148 (208)
..+.+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++||||+||||||+.++++++++.
T Consensus 112 ----~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 187 (360)
T 2bp1_A 112 ----GKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCK 187 (360)
T ss_dssp ----TCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHH
Confidence 12578999999999999999999999999999999889999999999999999999999999999999988764
Q ss_pred ----CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 149 ----HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 149 ----~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
.+|+++|++||++++..+.+++++|+++||++++|+||++|+|+++
T Consensus 188 ~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~ 237 (360)
T 2bp1_A 188 SNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGK 237 (360)
T ss_dssp HHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTC
T ss_pred HcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEecccccCcccCC
Confidence 5799999999999997667999999999999999999999998765
No 14
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=9.8e-51 Score=330.61 Aligned_cols=187 Identities=23% Similarity=0.267 Sum_probs=172.0
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||++ +.+++.++++.|+++|||+||||+.|| +|+.+|+ +||+||++..
T Consensus 35 ~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~TK~~~~- 102 (283)
T 3o0k_A 35 NHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIARADIFLTTKLWNS- 102 (283)
T ss_dssp CEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSSCGGGCEEEEEECGG-
T ss_pred CEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCCcccEEEEEccCCC-
Confidence 4689999999987 567899999999999999999999999 7999987 9999999864
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCC-CCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTK-IPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~ 148 (208)
..+++.+++++++||++||+||||+|++|||++. .+.+++|++|++|+++||||+||||||++++++++++.
T Consensus 103 -------~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 175 (283)
T 3o0k_A 103 -------DQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKE 175 (283)
T ss_dssp -------GCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHh
Confidence 3678999999999999999999999999999876 46789999999999999999999999999999999876
Q ss_pred --CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCCCC
Q 040616 149 --HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGCIS 208 (208)
Q Consensus 149 --~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~~~ 208 (208)
.+|.++|++||++.+ +.+++++|+++||++++|+||++|.|..++.+.++|++||+|.
T Consensus 176 ~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~ia~~~g~t~ 235 (283)
T 3o0k_A 176 SGVTPVLNQIELHPQFQ--QDELRLFHGKHDIATEAWSPLGQGKLLEDPTLKSIAEKHAKSV 235 (283)
T ss_dssp HSCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCC-CTTCHHHHHHHHHHTSCH
T ss_pred CCCCeEEEEeecCcccC--cHHHHHHHHHCCcEEEEecCCCCCccccchHHHHHHHHhCCCH
Confidence 567899999999998 5689999999999999999999999998999999999999973
No 15
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=2.6e-50 Score=327.31 Aligned_cols=187 Identities=24% Similarity=0.267 Sum_probs=172.3
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||+++ +.+++.++++.|+++|||+||||+.|| +|+.+|+ +||+||++..
T Consensus 15 ~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~TK~~~~- 83 (276)
T 3f7j_A 15 VEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREELFITSKVWNE- 83 (276)
T ss_dssp CEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCGGGCEEEEEECGG-
T ss_pred CEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCcccEEEEEeeCCC-
Confidence 46899999999873 457799999999999999999999999 7999986 9999999863
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI- 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 148 (208)
+.+++.+++++++||++||+||||+|++|||++.. .+++|++|++|+++||||+||||||++++++++++.
T Consensus 84 -------~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 155 (276)
T 3f7j_A 84 -------DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDA 155 (276)
T ss_dssp -------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHC
T ss_pred -------CCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhc
Confidence 46799999999999999999999999999998754 899999999999999999999999999999999876
Q ss_pred -CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCCCC
Q 040616 149 -HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGCIS 208 (208)
Q Consensus 149 -~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~~~ 208 (208)
.+|.++|++||++.+ +.+++++|+++||++++|+||++|.|..++.+.++|++||+|.
T Consensus 156 ~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~~~g~t~ 214 (276)
T 3f7j_A 156 EIKPMVNQVEFHPRLT--QKELRDYCKGQGIQLEAWSPLMQGQLLDNEVLTQIAEKHNKSV 214 (276)
T ss_dssp SSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHHHHTCCH
T ss_pred CCCceeeeeeeccccC--CHHHHHHHHHCCCEEEEecCCCCCccCCCHHHHHHHHHhCCCH
Confidence 467899999999998 5789999999999999999999999988999999999999873
No 16
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=1.6e-50 Score=330.37 Aligned_cols=187 Identities=25% Similarity=0.244 Sum_probs=170.7
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||+++. .+++.++++.|+++|||+||||+.|| +|+.+|+ +||+||++..
T Consensus 19 ~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~~~I~TK~~~~- 87 (288)
T 4f40_A 19 VKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPREDVFITTKLWNT- 87 (288)
T ss_dssp CEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGGCEEEEEECGG-
T ss_pred CeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhhEEEEEecCCC-
Confidence 468999999999852 37799999999999999999999999 8999986 9999999864
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCC-------CCHHHHHHHHHHHHHcCCcceEeeCcccHHHH
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTK-------IPIEVTIGELKRLVEEGKIKHIDLSEASASTI 142 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l 142 (208)
..+++.+++++++||++||+||||+|++|||+.. .+.+++|++|++|+++|+||+||||||+++++
T Consensus 88 -------~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l 160 (288)
T 4f40_A 88 -------EQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHL 160 (288)
T ss_dssp -------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHHHH
T ss_pred -------cCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCccEEEeccCCHHHH
Confidence 4678999999999999999999999999999863 56789999999999999999999999999999
Q ss_pred HHHhhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCCC
Q 040616 143 RRAHTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGCI 207 (208)
Q Consensus 143 ~~~~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~~ 207 (208)
+++++. .+|+++|++||++++ +.+++++|+++||++++|+||++|.|.+++.+.++|++||+|
T Consensus 161 ~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~~~g~t 225 (288)
T 4f40_A 161 EDVLAMCTVTPMVNQVELHPLNN--QADLRAFCDAKQIKVEAWSPLGQGKLLSNPILSAIGAKYNKT 225 (288)
T ss_dssp HHHHTTCSSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTC--CGGGCHHHHHHHHHHTCC
T ss_pred HHHHHhCCCCCeEEeccCccccC--CHHHHHHHHHCCCEEEEecCCCCCcccccHHHHHHHHHhCCC
Confidence 999886 578999999999998 568999999999999999999999999899999999999987
No 17
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=5.7e-50 Score=329.74 Aligned_cols=186 Identities=24% Similarity=0.270 Sum_probs=172.1
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||+++ +.+++.++++.|+++|||+||||+.|| +|+.+|+ +||+||++..
T Consensus 49 ~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~I~TK~~~~- 117 (310)
T 3b3e_A 49 VEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREELFITSKVWNE- 117 (310)
T ss_dssp CEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHSSSCGGGCEEEEEECGG-
T ss_pred CeeCceeeeCCcCC-------CHHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHhcCCCcceEEEEEeCCCC-
Confidence 46899999999873 457899999999999999999999999 7999986 9999999863
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI- 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 148 (208)
+.+++.+++++++||++||+||||+|++|||++.. .+++|++|++|+++||||+||||||++++++++++.
T Consensus 118 -------~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 189 (310)
T 3b3e_A 118 -------DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDA 189 (310)
T ss_dssp -------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHC
T ss_pred -------CCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCccc-HHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhc
Confidence 46799999999999999999999999999998764 899999999999999999999999999999999876
Q ss_pred -CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCCC
Q 040616 149 -HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGCI 207 (208)
Q Consensus 149 -~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~~ 207 (208)
.+|.++|++||++.+ +.+++++|+++||++++|+||++|.|..++.+.++|+++|+|
T Consensus 190 ~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~iA~~~g~t 247 (310)
T 3b3e_A 190 EIKPMVNQVEFHPRLT--QKELRDYCKGQGIQLEAWSPLMQGQLLDNEVLTQIAEKHNKS 247 (310)
T ss_dssp SSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHHHHTCC
T ss_pred CCCcceeeeeccCccC--CHHHHHHHHHcCCEEEEeccccCCCcCCCHHHHHHHHHhCCC
Confidence 567899999999998 578999999999999999999999999899999999999987
No 18
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=6.4e-50 Score=325.58 Aligned_cols=186 Identities=23% Similarity=0.248 Sum_probs=171.1
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||+++ +++++.++++.|+++|||+||||+.|| +|+.+|+ +||+||++..
T Consensus 18 ~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~~~i~TK~~~~- 86 (281)
T 1vbj_A 18 VMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVPREELFVTTKLWNS- 86 (281)
T ss_dssp CEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSCGGGCEEEEEECGG-
T ss_pred CeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCChhHEEEEeccCCC-
Confidence 36899999999874 347799999999999999999999999 7999887 9999999863
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI- 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 148 (208)
+.+++.+++++++||++||+||||+|++|||+ ..+..++|++|++|+++|+||+||||||++++++++++.
T Consensus 87 -------~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 158 (281)
T 1vbj_A 87 -------DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHC 158 (281)
T ss_dssp -------GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSC
T ss_pred -------CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhC
Confidence 46799999999999999999999999999998 667899999999999999999999999999999999986
Q ss_pred -CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCCC
Q 040616 149 -HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGCI 207 (208)
Q Consensus 149 -~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~~ 207 (208)
.+|+++|++||++.+ +.+++++|+++||++++|+||++|.+..++.+.++|++||+|
T Consensus 159 ~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~~~~~~~l~~ia~~~g~s 216 (281)
T 1vbj_A 159 KVAPMVNQIELHPLLN--QKALCEYCKSKNIAVTAWSPLGQGHLVEDARLKAIGGKYGKT 216 (281)
T ss_dssp SSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTGGGTTTTCHHHHHHHHTTTCC
T ss_pred CCCceeeeEEeccccC--CHHHHHHHHHcCCEEEEecCCcCCCCCCCHHHHHHHHHhCCC
Confidence 467999999999998 468999999999999999999999777688899999999987
No 19
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=3.5e-50 Score=327.41 Aligned_cols=186 Identities=23% Similarity=0.284 Sum_probs=170.4
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||+++ .+++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||++..
T Consensus 20 ~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R~~v~i~TK~~~~- 87 (283)
T 2wzm_A 20 NTLPVVGIGVGELS--------DSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRDEIYVTTKLATP- 87 (283)
T ss_dssp CEEESEEEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCGGGCEEEEEECGG-
T ss_pred CEEcceeEECCCCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCcccEEEEeccCCC-
Confidence 46899999999873 47799999999999999999999999 7999987 9999999753
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCC-CCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTK-IPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~ 148 (208)
+.+++.+++++++||++||+||||+|++|||++. .+..++|++|++|+++|+||+||||||++++++++++.
T Consensus 88 -------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 160 (283)
T 2wzm_A 88 -------DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSL 160 (283)
T ss_dssp -------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHh
Confidence 4679999999999999999999999999999874 45789999999999999999999999999999999886
Q ss_pred --CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCCC
Q 040616 149 --HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGCI 207 (208)
Q Consensus 149 --~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~~ 207 (208)
.+|+++|++||++++ +.+++++|+++||++++|+||++|.+..++.+.++|++||+|
T Consensus 161 ~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~~~g~s 219 (283)
T 2wzm_A 161 TYFTPAVNQIELHPLLN--QAALREVNAGYNIVTEAYGPLGVGRLLDHPAVTAIAEAHGRT 219 (283)
T ss_dssp HCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEECTTTTTGGGGCHHHHHHHHHHTCC
T ss_pred cCCCcccccccCCcccC--CHHHHHHHHHCCCEEEEecCCCCCcccchHHHHHHHHHhCCC
Confidence 567999999999998 468999999999999999999999877788899999999987
No 20
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=4.8e-50 Score=326.02 Aligned_cols=186 Identities=21% Similarity=0.208 Sum_probs=165.8
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||+++ .+++.++++.|+++|||+||||+.|| +|+.+|+ +||+||++..
T Consensus 12 ~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~~~i~TK~~~~- 79 (278)
T 1hw6_A 12 NSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDDLFITTKLWND- 79 (278)
T ss_dssp CEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGGCEEEEEECCC-
T ss_pred CccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChhhEEEEEeeCCC-
Confidence 46899999999873 35689999999999999999999999 7988887 9999999752
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-CCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-KIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~ 148 (208)
+.+++.+++++++||++||+||||+|++|||++ ..+.+++|++|++|+++|+||+||||||++++++++++.
T Consensus 80 -------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 152 (278)
T 1hw6_A 80 -------RHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAA 152 (278)
T ss_dssp ------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHh
Confidence 467899999999999999999999999999987 467899999999999999999999999999999999886
Q ss_pred --CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCccc--ccCCCCCcccchhhcCCC
Q 040616 149 --HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRG--FLSSGPKLIHLSATKGCI 207 (208)
Q Consensus 149 --~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G--~l~~~~~~~~~a~~~~~~ 207 (208)
.+|+++|++||++.+ +.+++++|+++||++++|+||++| .+..++.+.++|++||+|
T Consensus 153 ~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spl~~G~~~~~~~~~l~~ia~~~g~s 213 (278)
T 1hw6_A 153 TGVVPAVNQIELHPAYQ--QREITDWAAAHDVKIESWGPLGQGKYDLFGAEPVTAAAAAHGKT 213 (278)
T ss_dssp HSCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTGGGSSCCTTSHHHHHHHHHHTCC
T ss_pred cCCCceeEEEEeCcccC--CHHHHHHHHHcCCEEEEeccccCCCccccccHHHHHHHHHhCCC
Confidence 567999999999998 468999999999999999999999 455578899999999987
No 21
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=3.1e-49 Score=330.45 Aligned_cols=190 Identities=27% Similarity=0.356 Sum_probs=164.2
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCC-------CCchhhhcce----------EEEEe
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYG-------PHTNEILLAR----------VKLTT 63 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-------~g~~e~~~g~----------~~i~t 63 (208)
++||.||||||++|. ..+++++.++|+.|+++|||+||||+.|| .|.||+.+|+ +||+|
T Consensus 11 ~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~~~R~~~~i~T 86 (346)
T 1lqa_A 11 LEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIAS 86 (346)
T ss_dssp CEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHHCCGGGCEEEE
T ss_pred CeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhcCCCceEEEEE
Confidence 468999999998752 34678899999999999999999999995 6899999997 99999
Q ss_pred ecceecCC-CCc---cCCCChHHHHHHHHHHHHHcCCCcccEEEeecC---------------CC--CCCHHHHHHHHHH
Q 040616 64 KFGIRYED-GKY---SYCGDPAYLRAACEASLKCLDVDCIDLYYQHRI---------------DT--KIPIEVTIGELKR 122 (208)
Q Consensus 64 K~~~~~~~-~~~---~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~---------------~~--~~~~~~~~~~l~~ 122 (208)
|++....+ ..+ ..+.+++.+++++++||++|||||||+|++||| ++ ..+.+++|++|++
T Consensus 87 K~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~~~e~~~al~~ 166 (346)
T 1lqa_A 87 KVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAE 166 (346)
T ss_dssp EECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSCHHHHHHHHHH
T ss_pred eECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCCHHHHHHHHHH
Confidence 99743110 001 124789999999999999999999999999999 33 4578999999999
Q ss_pred HHHcCCcceEeeCcccHHHHHHHhhc------CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC
Q 040616 123 LVEEGKIKHIDLSEASASTIRRAHTI------HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG 194 (208)
Q Consensus 123 l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~ 194 (208)
|+++||||+||||||+.++++++++. .+|+++|++||++++..+.+++++|+++||++++|+||++|.|+++
T Consensus 167 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~ 244 (346)
T 1lqa_A 167 YQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGK 244 (346)
T ss_dssp HHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGGGGTT
T ss_pred HHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhhhcCc
Confidence 99999999999999999888776543 4699999999999997667899999999999999999999998764
No 22
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=1.6e-49 Score=324.93 Aligned_cols=187 Identities=26% Similarity=0.259 Sum_probs=161.9
Q ss_pred CCcCccccccccccc--------CCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce--------EEEEee
Q 040616 1 LEVSGQGLRCMGMFA--------FYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR--------VKLTTK 64 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~--------~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~--------~~i~tK 64 (208)
++||+||||||++|+ .|+. .+++++.++|+.|+++|||+||||+.|| .+|+.+|+ +||+||
T Consensus 40 ~~vs~lglGt~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~al~~~R~~v~I~TK 116 (292)
T 4exb_A 40 LAVSPLGLGTVKFGRDQGVKYPSGFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLLRGQREHWVIVSK 116 (292)
T ss_dssp CEECSEEEECSTTTCC---------CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHHHTTTGGGCEEEEE
T ss_pred CccCCEeEcccccCCCcccccccccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHHhccCCCcEEEEEe
Confidence 468999999999986 3443 4778899999999999999999999998 89999998 999999
Q ss_pred cceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecC--CCCCCHH-HHHHHHHHHHHcCCcceEeeCcccHHH
Q 040616 65 FGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRI--DTKIPIE-VTIGELKRLVEEGKIKHIDLSEASAST 141 (208)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~--~~~~~~~-~~~~~l~~l~~~G~ir~iGvs~~~~~~ 141 (208)
++....++....+.+++.+++++++||++||+||||+|++||| ++..+.+ ++|++|++|+++||||+||||||++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~ 196 (292)
T 4exb_A 117 VGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEG 196 (292)
T ss_dssp ESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTTSEEEEEEECSSHHH
T ss_pred eccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCCCceEEEeCCCCHHH
Confidence 9975444444557899999999999999999999999999999 5444455 899999999999999999999999999
Q ss_pred HHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCC
Q 040616 142 IRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSS 193 (208)
Q Consensus 142 l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~ 193 (208)
++++++. |+++|++||++++.. .+++++|+++||++++|+||++|.|++
T Consensus 197 l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~ 245 (292)
T 4exb_A 197 GLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACL 245 (292)
T ss_dssp HHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC-----
T ss_pred HHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCC
Confidence 9999988 899999999999965 599999999999999999999999864
No 23
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=5.8e-49 Score=326.14 Aligned_cols=189 Identities=22% Similarity=0.283 Sum_probs=168.9
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||+++ ..+.+++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 15 ~~v~~lglGt~~~~-----~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~R~~~~I~TK~ 86 (324)
T 3ln3_A 15 HLIPALGFGTYXPX-----EVPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGVVXREDLFVTTKL 86 (324)
T ss_dssp CEEESSEEECCCCT-----TSCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CCcCCeeecCCccc-----CCChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCCcccceeEEEeee
Confidence 46899999999874 24678899999999999999999999999 7888875 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-------------------CCCHHHHHHHHHHHHHc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-------------------KIPIEVTIGELKRLVEE 126 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~ 126 (208)
+.. ..+++.+++++++||++||+||||+|++|||++ ..+++++|++|++|+++
T Consensus 87 ~~~--------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~ 158 (324)
T 3ln3_A 87 WCT--------CFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDA 158 (324)
T ss_dssp CGG--------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHT
T ss_pred CCc--------cCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhc
Confidence 864 468999999999999999999999999999975 34689999999999999
Q ss_pred CCcceEeeCcccHHHHHHHhhc--C--CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccC----------
Q 040616 127 GKIKHIDLSEASASTIRRAHTI--H--PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLS---------- 192 (208)
Q Consensus 127 G~ir~iGvs~~~~~~l~~~~~~--~--~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~---------- 192 (208)
|+||+||||||++++++++++. . +|.++|++||++.+ +.+++++|+++||++++|+||++|.+.
T Consensus 159 Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~g~~~~~~~~~~~~~ 236 (324)
T 3ln3_A 159 GLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQRYXEWVDQNSPVL 236 (324)
T ss_dssp TSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTSCCCCTTTSCTTSCCG
T ss_pred CCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccc--hHHHHHHHHHcCCEEEEecCCCCCCcccccccCCcch
Confidence 9999999999999999999887 2 37899999999988 679999999999999999999999742
Q ss_pred -CCCCcccchhhcCCC
Q 040616 193 -SGPKLIHLSATKGCI 207 (208)
Q Consensus 193 -~~~~~~~~a~~~~~~ 207 (208)
..+.+.++|++||+|
T Consensus 237 ~~~~~l~~ia~~~g~t 252 (324)
T 3ln3_A 237 LNDPVLCDVAXXNXRS 252 (324)
T ss_dssp GGCHHHHHHHHHHTSC
T ss_pred hcCHHHHHHHHhhCCC
Confidence 234678899999987
No 24
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=5.1e-49 Score=325.45 Aligned_cols=187 Identities=22% Similarity=0.301 Sum_probs=167.2
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 11 ~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~R~~v~I~TK~ 79 (316)
T 3o3r_A 11 AKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVRREDLFIVSKL 79 (316)
T ss_dssp CEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCChHHcEEEeee
Confidence 4689999999976 446789999999999999999999999 7988884 9999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCC-------------------CCCCHHHHHHHHHHHHHc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRID-------------------TKIPIEVTIGELKRLVEE 126 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~-------------------~~~~~~~~~~~l~~l~~~ 126 (208)
+.. ..+++.+++++++||++|||||||+|++|||+ ...+++++|++|++|+++
T Consensus 80 ~~~--------~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~ 151 (316)
T 3o3r_A 80 WST--------FFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQ 151 (316)
T ss_dssp CGG--------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHT
T ss_pred CCC--------cCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHc
Confidence 864 36799999999999999999999999999996 346789999999999999
Q ss_pred CCcceEeeCcccHHHHHHHhhcC----CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccc----------cC
Q 040616 127 GKIKHIDLSEASASTIRRAHTIH----PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGF----------LS 192 (208)
Q Consensus 127 G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~----------l~ 192 (208)
|+||+||||||+.++++++++.. +|+++|++||++.+ +.+++++|+++||++++|+||++|. +.
T Consensus 152 Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~~~~~~~~~~~~~ 229 (316)
T 3o3r_A 152 GLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLT--QEKLIQYCHSKGIAVIAYSPLGSPDRPYAKPEDPVVL 229 (316)
T ss_dssp TSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHTTTCEEEEECTTCCTTCTTCCTTSCCST
T ss_pred CCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccc--hHHHHHHHHHcCCEEEEecccCCCCCccccccchhhh
Confidence 99999999999999999998852 58999999999988 6799999999999999999999993 33
Q ss_pred CCCCcccchhhcCCCC
Q 040616 193 SGPKLIHLSATKGCIS 208 (208)
Q Consensus 193 ~~~~~~~~a~~~~~~~ 208 (208)
..+.+.++|++||+|.
T Consensus 230 ~~~~l~~ia~~~g~t~ 245 (316)
T 3o3r_A 230 EIPKIKEIAAKHKKTI 245 (316)
T ss_dssp TCHHHHHHHHHHTCCH
T ss_pred cCHHHHHHHHHhCCCH
Confidence 3456889999999873
No 25
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=6.6e-49 Score=321.77 Aligned_cols=184 Identities=21% Similarity=0.222 Sum_probs=167.7
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||++ +.+++.++++.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 24 ~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~~v~I~TK~ 92 (298)
T 1vp5_A 24 VEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRREELFVTTKL 92 (298)
T ss_dssp CEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCChhhEEEEecc
Confidence 4689999999987 347799999999999999999999999 6877775 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHH
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRA 145 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~ 145 (208)
+.. +.+++.+++++++||++||+||||+|++|||++ +.+++|++|++|+++|+||+||||||++++++++
T Consensus 93 ~~~--------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 162 (298)
T 1vp5_A 93 WVS--------DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDL 162 (298)
T ss_dssp CGG--------GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred CCC--------CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHH
Confidence 753 467899999999999999999999999999986 7899999999999999999999999999999999
Q ss_pred hhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCccc--ccCCCCCcccchhhcCCC
Q 040616 146 HTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRG--FLSSGPKLIHLSATKGCI 207 (208)
Q Consensus 146 ~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G--~l~~~~~~~~~a~~~~~~ 207 (208)
++. .+|+++|++||++++ +.+++++|+++||++++|+||++| .+..++.+.++|+++|+|
T Consensus 163 ~~~~~~~p~v~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~~~~l~~~~l~~ia~~~g~s 226 (298)
T 1vp5_A 163 MVHHEIVPAVNQIEIHPFYQ--RQEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIAEKYGKT 226 (298)
T ss_dssp HHHCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTGGGGGGGGGCHHHHHHHHHHTCC
T ss_pred HHhCCCCceEEEEecccccC--CHHHHHHHHHCCCEEEEecccccCCccccCcHHHHHHHHHhCCC
Confidence 886 467999999999998 468999999999999999999999 455578899999999987
No 26
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=7.8e-49 Score=321.05 Aligned_cols=184 Identities=22% Similarity=0.187 Sum_probs=167.5
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||++ +++++.++++.|+++|||+||||+.|| +|+.+|+ +||+||++...
T Consensus 34 ~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R~~v~I~TK~~~~~ 102 (296)
T 1mzr_A 34 NVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNREELFITTKLWNDD 102 (296)
T ss_dssp CEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGGGCEEEEEECGGG
T ss_pred CeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCcccEEEEeccCCCc
Confidence 4689999999987 357899999999999999999999999 7999887 99999998532
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-CCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-KIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~ 148 (208)
. +.+++++++||++||+||||+|++|||++ ..+.+++|++|++|+++||||+||||||++++++++++.
T Consensus 103 --------~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 172 (296)
T 1mzr_A 103 --------H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDE 172 (296)
T ss_dssp --------T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH
T ss_pred --------H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHh
Confidence 2 78999999999999999999999999987 468899999999999999999999999999999999875
Q ss_pred --CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCccc--ccCCCCCcccchhhcCCC
Q 040616 149 --HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRG--FLSSGPKLIHLSATKGCI 207 (208)
Q Consensus 149 --~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G--~l~~~~~~~~~a~~~~~~ 207 (208)
.+|.++|++||++++ +.+++++|+++||++++|+||++| .+..++.+.++|+++|+|
T Consensus 173 ~~~~p~v~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~~~~l~~~~l~~ia~~~g~s 233 (296)
T 1mzr_A 173 TGVTPVINQIELHPLMQ--QRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKT 233 (296)
T ss_dssp HSCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTTTTCTTTTTSHHHHHHHHHHTCC
T ss_pred cCCCceEEeeecccccC--CHHHHHHHHHCCCeEEEeccccCCcchhcChHHHHHHHHHhCCC
Confidence 578999999999998 468999999999999999999999 455577889999999987
No 27
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=2.8e-48 Score=321.00 Aligned_cols=186 Identities=24% Similarity=0.326 Sum_probs=166.1
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||++ +++++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 11 ~~v~~lglGt~~~--------~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~I~TK~ 79 (316)
T 1us0_A 11 AKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVKREELFIVSKL 79 (316)
T ss_dssp CEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSCGGGCEEEEEE
T ss_pred CEECCEeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCChhHeEEEEee
Confidence 4689999999975 678899999999999999999999999 6887764 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-------------------CCCHHHHHHHHHHHHHc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-------------------KIPIEVTIGELKRLVEE 126 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~ 126 (208)
+.. ..+++.+++++++||++||+||||+|++|||+. ..+++++|++|++|+++
T Consensus 80 ~~~--------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~ 151 (316)
T 1us0_A 80 WCT--------YHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDE 151 (316)
T ss_dssp CGG--------GCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHT
T ss_pred CCC--------cCCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHHHHHHHHHHHC
Confidence 753 467999999999999999999999999999963 23678999999999999
Q ss_pred CCcceEeeCcccHHHHHHHhhc--C--CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCccccc----------C
Q 040616 127 GKIKHIDLSEASASTIRRAHTI--H--PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFL----------S 192 (208)
Q Consensus 127 G~ir~iGvs~~~~~~l~~~~~~--~--~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l----------~ 192 (208)
|+||+||||||+.++++++++. . +|+++|++||++.+ +.+++++|+++||++++|+||++|.+ .
T Consensus 152 Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~l~~~~~~~~~~~ 229 (316)
T 1us0_A 152 GLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLT--QEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLL 229 (316)
T ss_dssp TSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCTTCTTCCTTSCCTT
T ss_pred CCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccC--CHHHHHHHHHcCCEEEEecccccCccccccCCCcccc
Confidence 9999999999999999999886 3 67999999999988 56899999999999999999999964 2
Q ss_pred CCCCcccchhhcCCC
Q 040616 193 SGPKLIHLSATKGCI 207 (208)
Q Consensus 193 ~~~~~~~~a~~~~~~ 207 (208)
..+.+.++|++||+|
T Consensus 230 ~~~~l~~ia~~~g~s 244 (316)
T 1us0_A 230 EDPRIKAIAAKHNKT 244 (316)
T ss_dssp TCHHHHHHHHHHTCC
T ss_pred cCHHHHHHHHHhCCC
Confidence 235578899999987
No 28
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=2.2e-48 Score=322.45 Aligned_cols=189 Identities=20% Similarity=0.236 Sum_probs=166.4
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||++|. .+.+++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 14 ~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~I~TK~ 85 (323)
T 1afs_A 14 NFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGTVKREDIFYTSKL 85 (323)
T ss_dssp CEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCCCChHHeEEEEec
Confidence 368999999998741 3456789999999999999999999999 6887764 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-------------------CCCHHHHHHHHHHHHHc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-------------------KIPIEVTIGELKRLVEE 126 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~ 126 (208)
+.. ..+++.+++++++||++||+||||+|++|||+. ..+++++|++|++|+++
T Consensus 86 ~~~--------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~ 157 (323)
T 1afs_A 86 WST--------FHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDA 157 (323)
T ss_dssp CGG--------GCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHT
T ss_pred CCC--------cCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHc
Confidence 753 357889999999999999999999999999942 23678999999999999
Q ss_pred CCcceEeeCcccHHHHHHHhhc--C--CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCC---------
Q 040616 127 GKIKHIDLSEASASTIRRAHTI--H--PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSS--------- 193 (208)
Q Consensus 127 G~ir~iGvs~~~~~~l~~~~~~--~--~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~--------- 193 (208)
|+||+||||||+.++++++++. . +|+++|++||++.+ +.+++++|+++||++++|+||++|.|++
T Consensus 158 Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~l~~~~~~~~~~~ 235 (323)
T 1afs_A 158 GLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLN--QSKMLDYCKSKDIILVSYCTLGSSRDKTWVDQKSPVL 235 (323)
T ss_dssp TSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTSCCCCTTTSCTTSCCG
T ss_pred CCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccc--hHHHHHHHHHcCCEEEEecCccCCccccccccCCcch
Confidence 9999999999999999999886 3 67999999999988 5689999999999999999999998742
Q ss_pred --CCCcccchhhcCCC
Q 040616 194 --GPKLIHLSATKGCI 207 (208)
Q Consensus 194 --~~~~~~~a~~~~~~ 207 (208)
.+.+.++|++||+|
T Consensus 236 ~~~~~l~~ia~~~g~s 251 (323)
T 1afs_A 236 LDDPVLCAIAKKYKQT 251 (323)
T ss_dssp GGCHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHhCCC
Confidence 34567899999987
No 29
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=2.5e-48 Score=322.56 Aligned_cols=190 Identities=19% Similarity=0.218 Sum_probs=167.0
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||++|+ ..+++++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 16 ~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~i~TK~ 88 (326)
T 3buv_A 16 NSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGKVRREDIFYCGKL 88 (326)
T ss_dssp CEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCCCChhHeEEEeee
Confidence 468999999999763 23557799999999999999999999999 6877764 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-------------------CCCHHHHHHHHHHHHHc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-------------------KIPIEVTIGELKRLVEE 126 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~ 126 (208)
+.. ..+++.+++++++||++||+||||+|++|||+. ..+++++|++|++|+++
T Consensus 89 ~~~--------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~ 160 (326)
T 3buv_A 89 WAT--------NHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDA 160 (326)
T ss_dssp CGG--------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHT
T ss_pred CCC--------cCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHHHHHHHHHHHHHc
Confidence 753 468999999999999999999999999999963 23678999999999999
Q ss_pred CCcceEeeCcccHHHHHHHhhc--CC--ccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccC----------
Q 040616 127 GKIKHIDLSEASASTIRRAHTI--HP--ITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLS---------- 192 (208)
Q Consensus 127 G~ir~iGvs~~~~~~l~~~~~~--~~--~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~---------- 192 (208)
|+||+||||||+.++++++++. .+ |+++|++||++.+ +.+++++|+++||++++|+||++|.|+
T Consensus 161 Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~l~~~~~~~~~~~ 238 (326)
T 3buv_A 161 GLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFT--QPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPL 238 (326)
T ss_dssp TSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCCCCTTTSCTTSCCG
T ss_pred CCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccC--cHHHHHHHHHcCCEEEEeccccCCccccccccCCccc
Confidence 9999999999999999999986 34 7899999999988 568999999999999999999999764
Q ss_pred -CCCCcccchhhcCCC
Q 040616 193 -SGPKLIHLSATKGCI 207 (208)
Q Consensus 193 -~~~~~~~~a~~~~~~ 207 (208)
..+.+.++|++||+|
T Consensus 239 ~~~~~l~~ia~~~g~s 254 (326)
T 3buv_A 239 LKDALLNSLGKRYNKT 254 (326)
T ss_dssp GGCHHHHHHHHHHTCC
T ss_pred cccHHHHHHHHHhCCC
Confidence 123467899999987
No 30
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=2e-48 Score=321.98 Aligned_cols=186 Identities=23% Similarity=0.336 Sum_probs=165.7
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||++ +++++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 14 ~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~~~~i~TK~ 82 (317)
T 1qwk_A 14 VEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKREELFITTKA 82 (317)
T ss_dssp CEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCGGGCEEEEEE
T ss_pred CEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCChhheEEEeee
Confidence 4689999999975 678899999999999999999999999 6877754 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC---------CCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT---------KIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~---------~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
+.. ..+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|+++|+||+|||||
T Consensus 83 ~~~--------~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn 154 (317)
T 1qwk_A 83 WTH--------ELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSN 154 (317)
T ss_dssp CTT--------TSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHTTSBSSEEEES
T ss_pred CCC--------cCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHHcCCeeEEEecC
Confidence 752 467899999999999999999999999999974 347899999999999999999999999
Q ss_pred ccHHHHHHHhhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccC-------------------CCC
Q 040616 137 ASASTIRRAHTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLS-------------------SGP 195 (208)
Q Consensus 137 ~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~-------------------~~~ 195 (208)
|++++++++++. .+|+++|++||++.+ +.+++++|+++||++++|+||++|.|+ ...
T Consensus 155 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 232 (317)
T 1qwk_A 155 WNNDQISRALALGLTPVHNSQVELHLYFP--QHDHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAPAPSDLQDQ 232 (317)
T ss_dssp CCHHHHHHHHTTCSSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCSCCEECCBCTTCCBCCCEECSSGGGCH
T ss_pred CCHHHHHHHHHhcCCccceecceeccccC--cHHHHHHHHHcCCEEEEecCccCCCcccccccccccccccccchhhccH
Confidence 999999999987 468999999999998 568999999999999999999999653 123
Q ss_pred CcccchhhcCCC
Q 040616 196 KLIHLSATKGCI 207 (208)
Q Consensus 196 ~~~~~a~~~~~~ 207 (208)
.+.++|++||+|
T Consensus 233 ~l~~ia~~~g~s 244 (317)
T 1qwk_A 233 NVLALAEKTHKT 244 (317)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHHCcC
Confidence 467889999987
No 31
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=3.8e-48 Score=316.56 Aligned_cols=187 Identities=23% Similarity=0.227 Sum_probs=168.7
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------EEEEeecceec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------VKLTTKFGIRY 69 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------~~i~tK~~~~~ 69 (208)
++||.||||||+++ +.+++.++|++|+++|||+||||+.|| +|+.+|+ ++|+||++..
T Consensus 22 ~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r~~~~i~tk~~~~- 90 (290)
T 4gie_A 22 VRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPREEVWVTTKVWNS- 90 (290)
T ss_dssp CEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCGGGSEEEEEECGG-
T ss_pred CCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcchhcccccccccc-
Confidence 47999999999873 457799999999999999999999999 8999998 9999999864
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI- 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 148 (208)
..+++.+++++++||+||||||||+|++|||+. .+..++|++|++|+++||||+||+|||+++++.++.+.
T Consensus 91 -------~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 162 (290)
T 4gie_A 91 -------DQGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSC 162 (290)
T ss_dssp -------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTC
T ss_pred -------CCChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhc
Confidence 467999999999999999999999999999976 46889999999999999999999999999999999887
Q ss_pred -CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCC---CCCcccchhhcCCCC
Q 040616 149 -HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSS---GPKLIHLSATKGCIS 208 (208)
Q Consensus 149 -~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~---~~~~~~~a~~~~~~~ 208 (208)
.++.++|+++++..+ +.+++++|+++||++++|+||++|.+.. ...+.++|++||+|.
T Consensus 163 ~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~~~~l~~iA~~~g~t~ 224 (290)
T 4gie_A 163 KIRPMVNQVELHPLFQ--QRTLREFCKQHNIAITAWSPLGSGEEAGILKNHVLGEIAKKHNKSP 224 (290)
T ss_dssp SSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCSSGGGCGGGCHHHHHHHHHHTCCH
T ss_pred cCCCceeeEeccccch--hHHHHHHHHHcCceEeeecccccccccccchhHHHHHHHHHhCCCH
Confidence 457888988888877 6799999999999999999999998765 345789999999973
No 32
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=2.6e-48 Score=320.75 Aligned_cols=186 Identities=26% Similarity=0.301 Sum_probs=168.4
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||+++ +.+++.++|++|+++|||+||||+.|| +|+.+|+ +++++|+
T Consensus 49 ~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r~~~~i~~k~ 118 (314)
T 3b3d_A 49 VEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISREDLFITSKV 118 (314)
T ss_dssp CEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCGGGCEEEEEE
T ss_pred CcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCcccccccccC
Confidence 46999999999884 457799999999999999999999999 7888886 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHH
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRA 145 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~ 145 (208)
+.. +.+++.+++++++||+||+|||||+|++|+|++ .+..++|++|++|+++||||+||||||+.++++++
T Consensus 119 ~~~--------~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 189 (314)
T 3b3d_A 119 WNA--------DLGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVSNFQIHHLEDL 189 (314)
T ss_dssp CGG--------GCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred cCC--------CCCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEecCCchHHHHHH
Confidence 764 478999999999999999999999999999976 46789999999999999999999999999999999
Q ss_pred hhcC--CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCCC
Q 040616 146 HTIH--PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGCI 207 (208)
Q Consensus 146 ~~~~--~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~~ 207 (208)
++.. ++.++|+++++... +.+++++|+++||++++|+||++|.|++++...++|+++|+|
T Consensus 190 ~~~~~i~~~~nq~~~~~~~~--~~~ll~~c~~~gI~v~a~sPL~~G~L~~~~~~~~ia~~~g~t 251 (314)
T 3b3d_A 190 MTAAEIKPMINQVEFHPRLT--QKELIRYCQNQGIQMEAWSPLMQGQLLDHPVLADIAQTYNKS 251 (314)
T ss_dssp TTTCSSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHHHTTCC
T ss_pred HHhcCCCeEEEEeccccccc--hHHHHHHHHHcCCEEEEeccccCCcccCchhhHHHHHHcCCC
Confidence 8874 46677777766555 679999999999999999999999999999999999999997
No 33
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=4.6e-48 Score=321.84 Aligned_cols=186 Identities=25% Similarity=0.385 Sum_probs=165.4
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------------EEEEe
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------------VKLTT 63 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------------~~i~t 63 (208)
.+||.||||||++ +++++.++|+.|+++|||+||||+.|| +|+.+|+ +||+|
T Consensus 23 ~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~~~~~g~~R~~v~I~T 91 (334)
T 3krb_A 23 QYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFKDASSGIKREDVWITS 91 (334)
T ss_dssp SSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHCTTSSCCGGGCEEEE
T ss_pred CccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhhhccCCCChhhEEEEe
Confidence 4699999999986 678899999999999999999999999 7876652 89999
Q ss_pred ecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC--------------C-------CCHHHHHHHHHH
Q 040616 64 KFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT--------------K-------IPIEVTIGELKR 122 (208)
Q Consensus 64 K~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~-------~~~~~~~~~l~~ 122 (208)
|++.. ..+++.+++++++||++||+||||+|++|||+. + .+.+++|++|++
T Consensus 92 K~~~~--------~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~ 163 (334)
T 3krb_A 92 KLWNY--------NHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQ 163 (334)
T ss_dssp EECGG--------GCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHH
T ss_pred eeCCC--------CCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHH
Confidence 99864 467899999999999999999999999999943 2 468899999999
Q ss_pred HHHcCCcceEeeCcccHHHHHHHhhcC--CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC------
Q 040616 123 LVEEGKIKHIDLSEASASTIRRAHTIH--PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG------ 194 (208)
Q Consensus 123 l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~------ 194 (208)
|+++||||+||||||++++++++++.. +|+++|++||++.+ +.+++++|+++||++++|+||++|.|+++
T Consensus 164 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~c~~~gI~v~ayspL~~G~L~~~~~~~~~ 241 (334)
T 3krb_A 164 LVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHP--NDATVKFCLDNGIGVTAYSPMGGSYADPRDPSGTQ 241 (334)
T ss_dssp HHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCSBC-------CC
T ss_pred HHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCcccc--cHHHHHHHHHcCCEEEEEecCCCCcccCCCCCCCc
Confidence 999999999999999999999998874 78999999999998 57999999999999999999999987642
Q ss_pred -------CCcccchhhcCCC
Q 040616 195 -------PKLIHLSATKGCI 207 (208)
Q Consensus 195 -------~~~~~~a~~~~~~ 207 (208)
+.+.++|+++|+|
T Consensus 242 ~~~~~~~~~l~~iA~~~g~s 261 (334)
T 3krb_A 242 KNVILECKTLKAIADAKGTS 261 (334)
T ss_dssp BCGGGGCHHHHHHHHHHTSC
T ss_pred ccchhccHHHHHHHHHhCcC
Confidence 3467889999987
No 34
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=6.2e-48 Score=319.71 Aligned_cols=186 Identities=24% Similarity=0.315 Sum_probs=165.4
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||+. +++++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 14 ~~v~~lglGt~~~--------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~i~TK~ 82 (322)
T 1mi3_A 14 HLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGLVKREEIFLTSKL 82 (322)
T ss_dssp CEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CEECCeeeeCCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCChhhEEEEEee
Confidence 4689999999975 678899999999999999999999999 6877764 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-------------------------CCCHHHHHHHH
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-------------------------KIPIEVTIGEL 120 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------------~~~~~~~~~~l 120 (208)
+.. ..+++.+++++++||++||+||||+|++|||+. ..+++++|++|
T Consensus 83 ~~~--------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al 154 (322)
T 1mi3_A 83 WNN--------YHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKAL 154 (322)
T ss_dssp CGG--------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHH
T ss_pred CCC--------CCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHH
Confidence 753 467999999999999999999999999999942 23678999999
Q ss_pred HHHHHcCCcceEeeCcccHHHHHHHhhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCccccc-------
Q 040616 121 KRLVEEGKIKHIDLSEASASTIRRAHTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFL------- 191 (208)
Q Consensus 121 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l------- 191 (208)
++|+++|+||+||||||+.++++++++. .+|+++|++||++.+ +.+++++|+++||++++|+||++|.+
T Consensus 155 ~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~~~~~~~~~ 232 (322)
T 1mi3_A 155 EKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQ--QPKLIEFAQKAGVTITAYSSFGPQSFVEMNQGR 232 (322)
T ss_dssp HHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEECTTTTHHHHTTTCHH
T ss_pred HHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcC--cHHHHHHHHHcCCEEEEECCCCCCCcccccccc
Confidence 9999999999999999999999999886 468999999999988 56899999999999999999999832
Q ss_pred -------CCCCCcccchhhcCCC
Q 040616 192 -------SSGPKLIHLSATKGCI 207 (208)
Q Consensus 192 -------~~~~~~~~~a~~~~~~ 207 (208)
...+.+.++|++||+|
T Consensus 233 ~~~~~~~~~~~~l~~iA~~~g~t 255 (322)
T 1mi3_A 233 ALNTPTLFAHDTIKAIAAKYNKT 255 (322)
T ss_dssp HHTSCCTTSCHHHHHHHHHHTCC
T ss_pred cccCcccccCHHHHHHHHHcCCC
Confidence 2345678899999987
No 35
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=5.9e-48 Score=320.89 Aligned_cols=189 Identities=22% Similarity=0.257 Sum_probs=166.4
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||+++ ..+++++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 14 ~~v~~lglGt~~~~-----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~~~R~~~~I~TK~ 85 (331)
T 1s1p_A 14 HFMPVLGFGTYAPP-----EVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIFYTSKL 85 (331)
T ss_dssp CEEESEEEECCCCT-----TSCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CEeCCeeEcCccCC-----CCCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCCCCchheEEEecc
Confidence 36899999999874 13556789999999999999999999999 6877764 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-------------------CCCHHHHHHHHHHHHHc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-------------------KIPIEVTIGELKRLVEE 126 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~ 126 (208)
+.. ..+++.+++++++||++||+||||+|++|||+. ..+++++|++|++|+++
T Consensus 86 ~~~--------~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~ 157 (331)
T 1s1p_A 86 WST--------FHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDA 157 (331)
T ss_dssp CGG--------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHT
T ss_pred CCc--------cCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHc
Confidence 753 468999999999999999999999999999942 23678999999999999
Q ss_pred CCcceEeeCcccHHHHHHHhhc--C--CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCC---------
Q 040616 127 GKIKHIDLSEASASTIRRAHTI--H--PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSS--------- 193 (208)
Q Consensus 127 G~ir~iGvs~~~~~~l~~~~~~--~--~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~--------- 193 (208)
|+||+||||||+.++++++++. . +|+++|++||++.+ +.+++++|+++||++++|+||++|.|++
T Consensus 158 Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~l~~~~~~~~~~~ 235 (331)
T 1s1p_A 158 GLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFN--RSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVL 235 (331)
T ss_dssp TSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTSCCCCTTTSCTTSCCG
T ss_pred CCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcC--hHHHHHHHHHcCCEEEEeccccCCcccccccCCCccc
Confidence 9999999999999999999886 3 67999999999988 5689999999999999999999998642
Q ss_pred --CCCcccchhhcCCC
Q 040616 194 --GPKLIHLSATKGCI 207 (208)
Q Consensus 194 --~~~~~~~a~~~~~~ 207 (208)
.+.+.++|++||+|
T Consensus 236 ~~~~~l~~ia~~~g~s 251 (331)
T 1s1p_A 236 LEDPVLCALAKKHKRT 251 (331)
T ss_dssp GGCHHHHHHHHHHTSC
T ss_pred ccCHHHHHHHHHhCCC
Confidence 34567899999987
No 36
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=7.4e-48 Score=320.65 Aligned_cols=186 Identities=23% Similarity=0.319 Sum_probs=166.2
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||++ +++++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 34 ~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~~R~~v~I~TK~ 102 (335)
T 3h7u_A 34 AKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFEDRVVKREDLFITSKL 102 (335)
T ss_dssp CEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhcCCCCcceeEEEeee
Confidence 4689999999976 568899999999999999999999999 8888875 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC--------------CCCHHHHHHHHHHHHHcCCcce
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT--------------KIPIEVTIGELKRLVEEGKIKH 131 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~~~~~~~~~~l~~l~~~G~ir~ 131 (208)
+.. ..+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|+++||||+
T Consensus 103 ~~~--------~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~ 174 (335)
T 3h7u_A 103 WCT--------DHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARA 174 (335)
T ss_dssp CGG--------GCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSS
T ss_pred CCC--------CCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHHHHHHHHHHcCCccE
Confidence 753 467899999999999999999999999999964 2468999999999999999999
Q ss_pred EeeCcccHHHHHHHhhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccc-------cCCCCCcccchh
Q 040616 132 IDLSEASASTIRRAHTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGF-------LSSGPKLIHLSA 202 (208)
Q Consensus 132 iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~-------l~~~~~~~~~a~ 202 (208)
||||||++++++++++. .+|+++|++||++.+ +.+++++|+++||++++|+||++|. +...+.+.++|+
T Consensus 175 iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~sPL~~g~~~~~~~~~~~~~~l~~iA~ 252 (335)
T 3h7u_A 175 IGVSNFSTKKLADLLELARVPPAVNQVECHPSWR--QTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILNMVAE 252 (335)
T ss_dssp EEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCTTCTTSCCCGGGCHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHhCCCCeEEEecccccccC--CHHHHHHHHHCCCEEEEeccCcCCCCCCCCccccccHHHHHHHH
Confidence 99999999999999876 578999999999998 5689999999999999999999752 223456788999
Q ss_pred hcCCC
Q 040616 203 TKGCI 207 (208)
Q Consensus 203 ~~~~~ 207 (208)
++|+|
T Consensus 253 ~~g~t 257 (335)
T 3h7u_A 253 KLGKS 257 (335)
T ss_dssp HHTCC
T ss_pred HHCcC
Confidence 99987
No 37
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=5.9e-48 Score=318.52 Aligned_cols=188 Identities=22% Similarity=0.294 Sum_probs=165.3
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.|||||++++ . +++++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 18 ~~v~~lglGt~~~~----~--~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~~~g~~~R~~~~i~TK~ 88 (312)
T 1zgd_A 18 LKMPVVGMGSAPDF----T--CKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAIELGLVTRDDLFVTSKL 88 (312)
T ss_dssp CEEESBCBCCSCCT----T--CCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CCCCceeEcCcccC----C--CHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCCCcchheEEEecc
Confidence 36899999995432 1 335688999999999999999999999 7888774 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC----------------CCCHHHHHHHHHHHHHcCCc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT----------------KIPIEVTIGELKRLVEEGKI 129 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~----------------~~~~~~~~~~l~~l~~~G~i 129 (208)
+.. ..+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|+++|+|
T Consensus 89 ~~~--------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gki 160 (312)
T 1zgd_A 89 WVT--------ENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLT 160 (312)
T ss_dssp CGG--------GCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTTSB
T ss_pred CCC--------CCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHHHHHHHHHHHHcCCC
Confidence 853 467899999999999999999999999999963 24688999999999999999
Q ss_pred ceEeeCcccHHHHHHHhhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCccccc------CCCCCcccch
Q 040616 130 KHIDLSEASASTIRRAHTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFL------SSGPKLIHLS 201 (208)
Q Consensus 130 r~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l------~~~~~~~~~a 201 (208)
|+||||||+.++++++++. .+|+++|++||++++ +.+++++|+++||++++|+||++|.+ ...+.+.++|
T Consensus 161 r~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spl~~G~~~~~~~~~~~~~l~~ia 238 (312)
T 1zgd_A 161 KAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQ--QKKLREFCNAHGIVLTAFSPVRKGASRGPNEVMENDMLKEIA 238 (312)
T ss_dssp SCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTTTTTTTSSCTTTTCHHHHHHH
T ss_pred CEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccC--CHHHHHHHHHcCCEEEEecCCCCCCCCCCccccccHHHHHHH
Confidence 9999999999999999987 478999999999998 56899999999999999999999853 3355678999
Q ss_pred hhcCCC
Q 040616 202 ATKGCI 207 (208)
Q Consensus 202 ~~~~~~ 207 (208)
++||+|
T Consensus 239 ~~~g~s 244 (312)
T 1zgd_A 239 DAHGKS 244 (312)
T ss_dssp HHHTSC
T ss_pred HHcCCC
Confidence 999987
No 38
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=3.2e-47 Score=317.46 Aligned_cols=185 Identities=26% Similarity=0.351 Sum_probs=165.8
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHH-CCCCeEeCCCCCCCCchhhhcce--------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAID-SGITVLDTSNVYGPHTNEILLAR--------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~e~~~g~--------------~~i~tK~ 65 (208)
++||.||||||+. + +++.++|+.|++ +|||+||||+.|| +|+.+|+ +||+||+
T Consensus 46 ~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~g~~R~~v~I~TK~ 113 (344)
T 2bgs_A 46 HAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEAGIDRKDLFVTSKI 113 (344)
T ss_dssp CEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHTTCCGGGCEEEEEE
T ss_pred CccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhcCCCcccEEEEecc
Confidence 3689999999874 4 678999999999 9999999999999 6888764 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC---------------CCCHHHHHHHHHHHHHcCCcc
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT---------------KIPIEVTIGELKRLVEEGKIK 130 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~---------------~~~~~~~~~~l~~l~~~G~ir 130 (208)
+.. ..+++.+++++++||++|||||||+|++|||+. ..+..++|++|++|+++|+||
T Consensus 114 ~~~--------~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~aLe~l~~~GkIr 185 (344)
T 2bgs_A 114 WCT--------NLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVK 185 (344)
T ss_dssp CGG--------GCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHHHHHHHHHTTSEE
T ss_pred CCC--------CCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHHHHHHHHHcCCcc
Confidence 853 467999999999999999999999999999963 236789999999999999999
Q ss_pred eEeeCcccHHHHHHHhhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCccc--ccCCCCCcccchhhcCC
Q 040616 131 HIDLSEASASTIRRAHTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRG--FLSSGPKLIHLSATKGC 206 (208)
Q Consensus 131 ~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G--~l~~~~~~~~~a~~~~~ 206 (208)
+||||||++++++++++. .+|+++|++||++.+ +.+++++|+++||++++|+||++| .+...+.+.++|+++|+
T Consensus 186 ~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~--~~~ll~~~~~~gI~v~a~spL~~G~~~~~~~~~l~~iA~~~g~ 263 (344)
T 2bgs_A 186 DIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWK--NDKIFEACKKHGIHITAYSPLGSSEKNLAHDPVVEKVANKLNK 263 (344)
T ss_dssp EEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCTTTTCCTTCHHHHHHHHHHTC
T ss_pred EEEEecCCHHHHHHHHHhcCCCceeeecccCcccC--cHHHHHHHHHCCCEEEEeCcccCCCchhhccHHHHHHHHHhCC
Confidence 999999999999999886 468999999999988 568999999999999999999998 34446778999999998
Q ss_pred C
Q 040616 207 I 207 (208)
Q Consensus 207 ~ 207 (208)
|
T Consensus 264 s 264 (344)
T 2bgs_A 264 T 264 (344)
T ss_dssp C
T ss_pred C
Confidence 7
No 39
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=1.3e-46 Score=312.01 Aligned_cols=186 Identities=24% Similarity=0.335 Sum_probs=167.4
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce----------------EEEEee
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR----------------VKLTTK 64 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~----------------~~i~tK 64 (208)
++||.||||||+. +++++.++|++|+++|||+||||+.|| +|+.+|+ +++++|
T Consensus 11 ~~vp~iGlGtw~~--------~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~~r~~~~~~~~ 79 (324)
T 4gac_A 11 QKMPLIGLGTWKS--------EPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAVPREELFVTSK 79 (324)
T ss_dssp CEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSBCGGGCEEEEE
T ss_pred CEeccceeECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhcccceecccccccccc
Confidence 4799999999976 678899999999999999999999999 8999987 788888
Q ss_pred cceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC-------------------CCCHHHHHHHHHHHHH
Q 040616 65 FGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT-------------------KIPIEVTIGELKRLVE 125 (208)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~ 125 (208)
++.. ..+++.+++++++||+||+|||||+|++|||++ ..+++++|++|++|++
T Consensus 80 ~~~~--------~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~ 151 (324)
T 4gac_A 80 LWNT--------KHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVA 151 (324)
T ss_dssp ECGG--------GCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHHHHH
T ss_pred cCCC--------CCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHH
Confidence 8753 478999999999999999999999999999863 3568999999999999
Q ss_pred cCCcceEeeCcccHHHHHHHhhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccccCCC---------
Q 040616 126 EGKIKHIDLSEASASTIRRAHTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSG--------- 194 (208)
Q Consensus 126 ~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~--------- 194 (208)
+||||+||+|||++++++++... .++.++|++||+..+ +.+++++|+++||++++|+||++|.+..+
T Consensus 152 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spL~~g~~~~~~~~~~~~~~ 229 (324)
T 4gac_A 152 KGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCHARGLEVTAYSPLGSSDRAWRHPDEPVLLE 229 (324)
T ss_dssp TTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCGGGGGGSTTSCCGGG
T ss_pred CCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhh--HHHHHHHHHHhceeeeecCCcccCccccCCCCCcchhh
Confidence 99999999999999999999876 568999999999988 67899999999999999999999976543
Q ss_pred -CCcccchhhcCCC
Q 040616 195 -PKLIHLSATKGCI 207 (208)
Q Consensus 195 -~~~~~~a~~~~~~ 207 (208)
+.+.++|+++|+|
T Consensus 230 ~~~l~~iA~~~g~t 243 (324)
T 4gac_A 230 EPVVLALAEKHGRS 243 (324)
T ss_dssp CHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCCC
Confidence 3467899999987
No 40
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=4.8e-47 Score=315.20 Aligned_cols=182 Identities=23% Similarity=0.328 Sum_probs=162.6
Q ss_pred CCcCcccccccccccCCCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---------------EEEEeec
Q 040616 1 LEVSGQGLRCMGMFAFYGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---------------VKLTTKF 65 (208)
Q Consensus 1 ~~v~~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---------------~~i~tK~ 65 (208)
++||.||||||+ ++.++|+.|+++|||+||||+.|| +|+.+|+ +||+||+
T Consensus 34 ~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~~R~~v~I~TK~ 98 (331)
T 3h7r_A 34 AKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDGFVKREELFITSKL 98 (331)
T ss_dssp CEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSSCGGGCEEEEEE
T ss_pred CEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhcCCCCchhEEEEEee
Confidence 468999999985 467899999999999999999999 8988874 8999999
Q ss_pred ceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC--------------CCCHHHHHHHHHHHHHcCCcce
Q 040616 66 GIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT--------------KIPIEVTIGELKRLVEEGKIKH 131 (208)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~~~~~~~~~~l~~l~~~G~ir~ 131 (208)
+.. +.+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|+++||||+
T Consensus 99 ~~~--------~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~ 170 (331)
T 3h7r_A 99 WSN--------DHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARA 170 (331)
T ss_dssp CGG--------GCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSS
T ss_pred CCC--------CCCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHHHHHHHHHHHcCCCcE
Confidence 753 467899999999999999999999999999964 3568999999999999999999
Q ss_pred EeeCcccHHHHHHHhhc--CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcccc-------cCCCCCcccchh
Q 040616 132 IDLSEASASTIRRAHTI--HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGRGF-------LSSGPKLIHLSA 202 (208)
Q Consensus 132 iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~-------l~~~~~~~~~a~ 202 (208)
||||||+.++++++++. .+|+++|++||++.+ +.+++++|+++||++++|+||++|. +...+.+.++|+
T Consensus 171 iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~g~~~~~~~~~~~~~~l~~iA~ 248 (331)
T 3h7r_A 171 IGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQ--QQGLHELCKSKGVHLSGYSPLGSQSKGEVRLKVLQNPIVTEVAE 248 (331)
T ss_dssp EEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTSCSCTTTTTHHHHTCHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHhcCCCceeEEeecccccC--CHHHHHHHHHCCCEEEEeCCCCCCCCCCCccchhcCHHHHHHHH
Confidence 99999999999999876 478999999999998 5799999999999999999999752 233566889999
Q ss_pred hcCCC
Q 040616 203 TKGCI 207 (208)
Q Consensus 203 ~~~~~ 207 (208)
++|+|
T Consensus 249 ~~g~t 253 (331)
T 3h7r_A 249 KLGKT 253 (331)
T ss_dssp HHTCC
T ss_pred HHCcC
Confidence 99987
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.04 E-value=2.4e-06 Score=77.94 Aligned_cols=99 Identities=13% Similarity=0.064 Sum_probs=75.8
Q ss_pred HHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeC--cccH---H----------------HHHHH
Q 040616 87 CEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLS--EASA---S----------------TIRRA 145 (208)
Q Consensus 87 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs--~~~~---~----------------~l~~~ 145 (208)
++.+|.+|++||+|+ ++|..+.. ..++++++++++..+|+|+.+|++ ++.. + ...++
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~~-~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNVA-GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCCH-HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceE-EEECCcCc-cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 456778899999999 47654432 235789999999999999999655 3333 1 23445
Q ss_pred hhcCCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCcc-ccc
Q 040616 146 HTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLGR-GFL 191 (208)
Q Consensus 146 ~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~-G~l 191 (208)
++...+++++++||-..+ ++++.|.++|++|++.+|.++ |++
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTCC
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCCC
Confidence 567889999999997753 788999999999999999986 554
No 42
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=90.19 E-value=2.5 Score=34.83 Aligned_cols=146 Identities=9% Similarity=-0.098 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+..+.+.+.|++.|..--.-......+. +|. +-|..+.. ..++.+...+ .+++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~d~~l~vDan---------~~~~~~~a~~----~~~~ 211 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGADWQSDIDRIRACLPLLEPGEKAMADAN---------QGWRVDNAIR----LARA 211 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHGGGSCTTCEEEEECT---------TCSCHHHHHH----HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEEECC---------CCCCHHHHHH----HHHH
Confidence 3456777788889999999874211000011121 222 44444432 1345544433 3333
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEee-CcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDL-SEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVP 171 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~ 171 (208)
|. ..++ ++..|-+ .++.+.++++.-.|-=++. +-++.+.++++++....+++|+..+..-. ..-..+..
T Consensus 212 l~--~~~i-~iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 282 (379)
T 2rdx_A 212 TR--DLDY-ILEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRD 282 (379)
T ss_dssp TT--TSCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHH
T ss_pred HH--hCCe-EEeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHH
Confidence 42 2344 5565533 5777888887655543332 44688999999999999999998876533 11247899
Q ss_pred HHHHhCCcEEEcccCccc
Q 040616 172 TCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl~~G 189 (208)
.|+++|+.++..+-+.++
T Consensus 283 ~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 283 FLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp HHHHTTCCEEEECSBCSH
T ss_pred HHHHcCCeEEEeeccCcH
Confidence 999999999988655443
No 43
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=90.03 E-value=6.2 Score=32.73 Aligned_cols=146 Identities=8% Similarity=-0.032 Sum_probs=90.1
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCC----CCC--------C----c---hhhh-------cce-EEEEeecceecCCCCc
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNV----YGP--------H----T---NEIL-------LAR-VKLTTKFGIRYEDGKY 74 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~--------g----~---~e~~-------~g~-~~i~tK~~~~~~~~~~ 74 (208)
+.++..+..+.+.+.|++.|-.-.. +|. - . ..+. +|. +-|.....
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan-------- 223 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMH-------- 223 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECC--------
Confidence 5666777888889999998864221 221 0 0 1111 222 44444432
Q ss_pred cCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEe-eCcccHHHHHHHhhcCCccE
Q 040616 75 SYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHID-LSEASASTIRRAHTIHPITV 153 (208)
Q Consensus 75 ~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~ 153 (208)
..++.+...+-++. |+.+++++ +..|-+. +.++.+.+++++-.|-=.+ =+-++.+.++++++....++
T Consensus 224 -~~~~~~~a~~~~~~-l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 292 (407)
T 2o56_A 224 -AFTDTTSAIQFGRM-IEELGIFY-----YEEPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSV 292 (407)
T ss_dssp -TCSCHHHHHHHHHH-HGGGCCSC-----EECSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSE
T ss_pred -CCCCHHHHHHHHHH-HHhcCCCE-----EeCCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 13456665555443 67666554 4455332 2366777777765553333 34467889999999888999
Q ss_pred EeeccCcCCCC-ccccHHHHHHHhCCcEEEcccC
Q 040616 154 VRLEWSLRSRD-VEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 154 ~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl 186 (208)
+|+..+..-.- .-..+...|+++|+.++..+..
T Consensus 293 v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 293 IQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 99987764321 1237899999999999987764
No 44
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=89.37 E-value=4.6 Score=33.30 Aligned_cols=147 Identities=13% Similarity=0.061 Sum_probs=91.5
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCC-CCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVY-GPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLK 92 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Y-g~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 92 (208)
+.++..+..+.+.+.|++.|..--.- .... .+. +|. +-|..+.. ..++.+...+-++. |+
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~d~~l~vDan---------~~~~~~~a~~~~~~-l~ 232 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGPQAKIAADMH---------WNQTPERALELIAE-MQ 232 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCTTSEEEEECC---------SCSCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCCCCEEEEECC---------CCCCHHHHHHHHHH-Hh
Confidence 55667778888899999988742100 0011 222 232 44444432 13456665555443 77
Q ss_pred HcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEee-CcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHH
Q 040616 93 CLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDL-SEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIV 170 (208)
Q Consensus 93 ~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l 170 (208)
.++++++ ..|-+. +.|+.+.+++++-.|-=++- +-++.+.++++++....+++|+..+. -. ..-..+.
T Consensus 233 ~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~ 302 (388)
T 2nql_A 233 PFDPWFA-----EAPVWT----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRIG 302 (388)
T ss_dssp GGCCSCE-----ECCSCT----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHHH
T ss_pred hcCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHH
Confidence 7776654 445322 34777788887655543333 44688999999998889999997766 22 1123788
Q ss_pred HHHHHhCCcEEEcccCccc
Q 040616 171 PTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 171 ~~~~~~gi~v~a~~pl~~G 189 (208)
.+|+++|+.++..+-+.++
T Consensus 303 ~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 303 ALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp HHHHHHTCEECCCCCSSCS
T ss_pred HHHHHcCCeEEeecCCCcH
Confidence 9999999999887555443
No 45
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=89.35 E-value=6.9 Score=32.00 Aligned_cols=144 Identities=10% Similarity=-0.003 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCc---hhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHT---NEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEAS 90 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~s 90 (208)
+.++..+..+.+.+.|++.|..-- |.+. ..+. +|. +-|..+.. ..++.+...+-++ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~G~d~~l~vDan---------~~~~~~~a~~~~~-~ 213 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKV--GRPDLKEDVDRVSALREHLGDSFPLMVDAN---------MKWTVDGAIRAAR-A 213 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--CCSSHHHHHHHHHHHHHHHCTTSCEEEECT---------TCSCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC--CCCCHHHHHHHHHHHHHHhCCCCeEEEECC---------CCCCHHHHHHHHH-H
Confidence 456677778888999999887421 2111 1122 222 33333332 1345665554444 3
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceE-eeCcccHHHHHHHhhcCCccEEeeccCcCCCC-cccc
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHI-DLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEE 168 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 168 (208)
|+.+++++ +..|-+. +-|+.+.++++.-.|-=+ +=+-++.+.++++++....+++|+..+..-.- .-..
T Consensus 214 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 214 LAPFDLHW-----IEEPTIP----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp HGGGCCSE-----EECCSCT----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHH
T ss_pred HHhcCCCE-----EECCCCc----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHH
Confidence 66666554 4555332 236666777765444333 33457889999999998899999987765331 2237
Q ss_pred HHHHHHHhCCcEEEcccC
Q 040616 169 IVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 169 ~l~~~~~~gi~v~a~~pl 186 (208)
+...|+++|+.++..+.+
T Consensus 285 i~~~A~~~gi~~~~h~~~ 302 (371)
T 2ovl_A 285 VAALAEANNMLLTSHGVH 302 (371)
T ss_dssp HHHHHHHTTCCEEECSCH
T ss_pred HHHHHHHcCCeEccccHH
Confidence 899999999999987654
No 46
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=89.27 E-value=9.2 Score=32.32 Aligned_cols=146 Identities=15% Similarity=0.094 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHH-CCCC-----eEeCCC--CCCCCchhhhcceEEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAID-SGIT-----VLDTSN--VYGPHTNEILLARVKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~-~Gi~-----~~DtA~--~Yg~g~~e~~~g~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.+++.++|..|++ +|+. -+|+|. .|. .+ -|+..+..|.... +.......+++++.+-..+.++.
T Consensus 222 ~~~eaL~ll~~Ai~~aGy~~~i~i~lD~Aasefy~---~~--~g~Y~l~f~~~~~--~~~~~~~~t~~elid~y~~lle~ 294 (441)
T 3qtp_A 222 GAREALDLLVEAIAKAGYTGKIEIAMDCAASEFYN---EE--TKKYDLGKKIPAD--KKDPSLVKDVDGLIAEYVDYGKH 294 (441)
T ss_dssp SHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEE---TT--TTEEETTTTSCGG--GCCGGGEECHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCceEEEccchhHHHhhh---cc--CCeEEeecCCccc--ccccccccCHHHHHHHHHHHhhh
Confidence 56889999999995 6886 257663 232 10 1222211111100 00001124677777777777765
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcC-CcceEee--CcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEG-KIKHIDL--SEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEI 169 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGv--s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~ 169 (208)
. +++++-.|-+..+ |+.+.+|.++- +|--+|= ...+++.+.++++....+++|+..|-.-.- .-.++
T Consensus 295 y-----pI~~IEDPl~~dD----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITEalka 365 (441)
T 3qtp_A 295 Y-----PIASIEDPFAEDD----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETFKT 365 (441)
T ss_dssp S-----CEEEEESCSCTTC----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHH
T ss_pred c-----ceeeecCCCChHH----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEecccccccHHHHHHH
Confidence 4 4888988865544 44444555442 5655662 234799999999998899999988865432 12378
Q ss_pred HHHHHHhCCcEEEc
Q 040616 170 VPTCRELGIGIVAY 183 (208)
Q Consensus 170 l~~~~~~gi~v~a~ 183 (208)
...|+++|+.++..
T Consensus 366 a~lA~~~G~~vmvs 379 (441)
T 3qtp_A 366 IKMAQEKGWGVMAS 379 (441)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHcCCeEEEe
Confidence 89999999998753
No 47
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=89.12 E-value=8.5 Score=31.72 Aligned_cols=146 Identities=8% Similarity=0.033 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHHCCCCeEeC--CCC----------CCCC---c---hhhh-------cce-EEEEeecceecCCCCcc
Q 040616 22 PESCMIALIHHAIDSGITVLDT--SNV----------YGPH---T---NEIL-------LAR-VKLTTKFGIRYEDGKYS 75 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~----------Yg~g---~---~e~~-------~g~-~~i~tK~~~~~~~~~~~ 75 (208)
+.++..+..+.+.+.|++.|.. +.. ||.. . ..+. +|. +-|.....
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n--------- 207 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLS--------- 207 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT---------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECC---------
Confidence 5666777788889999998763 211 2200 0 0111 222 33433332
Q ss_pred CCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEe-eCcccHHHHHHHhhcCCccEE
Q 040616 76 YCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHID-LSEASASTIRRAHTIHPITVV 154 (208)
Q Consensus 76 ~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~ 154 (208)
..++.+...+-++. |+.+ ++.++..|-+. +.++.+.+++++-.|-=.+ =+-++.+.++++++....+++
T Consensus 208 ~~~~~~~a~~~~~~-l~~~-----~i~~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v 277 (392)
T 2poz_A 208 GGLTTDETIRFCRK-IGEL-----DICFVEEPCDP----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGII 277 (392)
T ss_dssp TCSCHHHHHHHHHH-HGGG-----CEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEE
T ss_pred CCCCHHHHHHHHHH-HHhc-----CCCEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 13455554443333 4444 55566776433 2366777777765554333 244678899999998889999
Q ss_pred eeccCcCCCC-ccccHHHHHHHhCCcEEEcccC
Q 040616 155 RLEWSLRSRD-VEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 155 q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl 186 (208)
|+..+-.-.- .-..+...|+++|+.++..+..
T Consensus 278 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 278 QPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp CCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 9987764321 1237999999999999987765
No 48
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=88.82 E-value=8.4 Score=31.31 Aligned_cols=146 Identities=12% Similarity=0.056 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+.++.+++.|++.|-.--.-......+. +|. +-|...... .++.+.. .+.+++
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a~g~~~~l~vDan~---------~~~~~~a----~~~~~~ 205 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAVGFDIKLRLDANQ---------AWTPKDA----VKAIQA 205 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTT---------CSCHHHH----HHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCeEEEECCC---------CCCHHHH----HHHHHH
Confidence 5566777788888999998864321110011112 222 444444321 3344433 233445
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVP 171 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~ 171 (208)
| +..++.++..|-+.. .++.+.+++++-.+ -+.|=+-++.+.+.++++....+++|+..+..-.- .-..+..
T Consensus 206 L--~~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~ 279 (354)
T 3jva_A 206 L--ADYQIELVEQPVKRR----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQ 279 (354)
T ss_dssp T--TTSCEEEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred H--HhcCCCEEECCCChh----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHH
Confidence 5 336677778775433 25667777776544 33444568899999999988899999977654321 1247999
Q ss_pred HHHHhCCcEEEcccC
Q 040616 172 TCRELGIGIVAYSLL 186 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl 186 (208)
.|+++|+.++..+.+
T Consensus 280 ~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 280 ICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHTTCEEEECCCT
T ss_pred HHHHcCCeEEecCCC
Confidence 999999999988887
No 49
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=88.32 E-value=8.7 Score=31.69 Aligned_cols=145 Identities=9% Similarity=-0.011 Sum_probs=89.8
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCC-Cchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGP-HTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLK 92 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 92 (208)
+.++..+..+.+.+.|++.|..-..... ....+. +|. +-|..+.. ..++.+...+-++. |+
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan---------~~~~~~~a~~~~~~-l~ 218 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLA---------VPEDLDQTKSFLKE-VS 218 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECC---------CCSCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcC---------CCCCHHHHHHHHHH-HH
Confidence 5566777888889999998874211110 011111 222 33333332 13456665554444 67
Q ss_pred HcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceE-eeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHH
Q 040616 93 CLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHI-DLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIV 170 (208)
Q Consensus 93 ~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l 170 (208)
.+++++ +..|-+. +.|+.+.+++++-.|-=. +=+-++.+.++++++....+++|+..+..-.- .-..+.
T Consensus 219 ~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 289 (391)
T 2qgy_A 219 SFNPYW-----IEEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEIS 289 (391)
T ss_dssp GGCCSE-----EECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHH
T ss_pred hcCCCe-----EeCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHH
Confidence 776654 4455332 346777777776555333 33456889999999998899999987765331 123789
Q ss_pred HHHHHhCCcEEEccc
Q 040616 171 PTCRELGIGIVAYSL 185 (208)
Q Consensus 171 ~~~~~~gi~v~a~~p 185 (208)
..|+++|+.++..+.
T Consensus 290 ~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 290 NEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHTTCEECCBCC
T ss_pred HHHHHCCCEEeccCC
Confidence 999999999998875
No 50
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=88.31 E-value=4.9 Score=32.98 Aligned_cols=149 Identities=10% Similarity=-0.001 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+.++.+++.|++.|-.--........+ .+|. +-|..... ..++.+...+ +-+.|+.
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~g~~~~l~vDaN---------~~~~~~~A~~-~~~~l~~ 209 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAAGDSITLRIDAN---------QGWSVETAIE-TLTLLEP 209 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCSSSEEEEECT---------TCBCHHHHHH-HHHHHGG
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEECC---------CCCChHHHHH-HHHHHhh
Confidence 456677778888899999875321111001111 2222 33333332 1344444332 2344555
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVP 171 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~ 171 (208)
++++++ ..|-+. +-++.+.+++++-.+ -+.|=+-++.+++.++++....+++|+..+..-.- .-..+..
T Consensus 210 ~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~ 280 (368)
T 3q45_A 210 YNIQHC-----EEPVSR----NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIR 280 (368)
T ss_dssp GCCSCE-----ECCBCG----GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHH
T ss_pred cCCCEE-----ECCCCh----hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHH
Confidence 555544 455321 235667777776444 34444668899999999988899999987765321 1247999
Q ss_pred HHHHhCCcEEEcccCccc
Q 040616 172 TCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl~~G 189 (208)
.|+++|+.++..+.+.++
T Consensus 281 ~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 281 LAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp HHHHTTCCEEECCSSCCH
T ss_pred HHHHcCCcEEecCccccH
Confidence 999999999987776543
No 51
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=87.67 E-value=4.1 Score=33.28 Aligned_cols=148 Identities=11% Similarity=0.070 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHH-HHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLR-AACEASLK 92 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~-~~~~~sL~ 92 (208)
+.++..+..+.+.+.|++.|..--.-......+. +|. +-|..... + .++.+... +-++ .|+
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~~~~l~vDan-----~----~~~~~~a~~~~~~-~l~ 210 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERVGNDIAIRVDVN-----Q----GWKNSANTLTALR-SLG 210 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECT-----T----TTBSHHHHHHHHH-TST
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHHHHHHHHhCCCCeEEEECC-----C----CCCHHHHHHHHHH-HHH
Confidence 4566777788888999999874211110001121 222 34433332 1 23444333 3222 244
Q ss_pred HcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceE-eeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHH
Q 040616 93 CLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHI-DLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIV 170 (208)
Q Consensus 93 ~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l 170 (208)
.++++ ++..|-+. +-|+.+.++++.-.|-=. +=+-++.+.+.++++....+++|+..+..-.- .-..+.
T Consensus 211 ~~~i~-----~iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 281 (369)
T 2p8b_A 211 HLNID-----WIEQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLA 281 (369)
T ss_dssp TSCCS-----CEECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHH
T ss_pred hCCCc-----EEECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHH
Confidence 44444 44555322 236777788776555333 33457889999999988899999977654321 123789
Q ss_pred HHHHHhCCcEEEcccCcc
Q 040616 171 PTCRELGIGIVAYSLLGR 188 (208)
Q Consensus 171 ~~~~~~gi~v~a~~pl~~ 188 (208)
..|+++|+.++..+.+.+
T Consensus 282 ~~A~~~g~~~~~~~~~es 299 (369)
T 2p8b_A 282 HQAEMAGIECQVGSMVES 299 (369)
T ss_dssp HHHHHTTCEEEECCSSCC
T ss_pred HHHHHcCCcEEecCCCcc
Confidence 999999999998776544
No 52
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=87.50 E-value=6.8 Score=31.92 Aligned_cols=148 Identities=13% Similarity=0.080 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCch---hhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTN---EIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEAS 90 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~---e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~s 90 (208)
+.++..+....+.+.|++.|..-- |.+.. .+. +|. +-|..... ..++.+...+-++.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~d~~~v~avr~a~g~~~~l~vDan---------~~~~~~~a~~~~~~- 207 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKV--GKDDIATDIARIQEIRKRVGSAVKLRLDAN---------QGWRPKEAVTAIRK- 207 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--CSSCHHHHHHHHHHHHHHHCSSSEEEEECT---------TCSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEe--CCCCHHHHHHHHHHHHHHhCCCCeEEEECC---------CCCCHHHHHHHHHH-
Confidence 456677777888899999987421 21111 122 222 44444432 13455555544443
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-cccc
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEE 168 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 168 (208)
|+..+ .++.++..|-+. +.|+.+.+++++-.|- +.+=+-++.+.+.++++....+++|+..+..-.- .-..
T Consensus 208 l~~~~---~~i~~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 280 (366)
T 1tkk_A 208 MEDAG---LGIELVEQPVHK----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEK 280 (366)
T ss_dssp HHHTT---CCEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HhhcC---CCceEEECCCCc----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHH
Confidence 55511 345566776432 2366777777665443 3333557889999999988899999977654321 1247
Q ss_pred HHHHHHHhCCcEEEcccCcc
Q 040616 169 IVPTCRELGIGIVAYSLLGR 188 (208)
Q Consensus 169 ~l~~~~~~gi~v~a~~pl~~ 188 (208)
+...|+++|+.++..+.+.+
T Consensus 281 i~~~A~~~g~~~~~~~~~es 300 (366)
T 1tkk_A 281 INAMAEACGVECMVGSMIET 300 (366)
T ss_dssp HHHHHHHHTCCEEECCSSCC
T ss_pred HHHHHHHcCCcEEecCcccc
Confidence 89999999999998877644
No 53
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=86.76 E-value=7.9 Score=32.16 Aligned_cols=144 Identities=10% Similarity=-0.012 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHCCCCeEeCCCCCCCCchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHc
Q 040616 23 ESCMIALIHHAIDSGITVLDTSNVYGPHTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCL 94 (208)
Q Consensus 23 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 94 (208)
.++..+.++.+++.|++.|..-- +.....+ .+|. +-|..... ..++.+. .+ +-+.|+.+
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~v~avR~a~G~~~~L~vDaN---------~~w~~~~-~~-~~~~l~~~ 230 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEPLQETRRAVGDHFPLWTDAN---------SSFELDQ-WE-TFKAMDAA 230 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHHHHHHHHHHCTTSCEEEECT---------TCCCGGG-HH-HHHHHGGG
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHHHHHHHHhcCCCCEEEEeCC---------CCCCHHH-HH-HHHHHHhc
Confidence 67778888888999999875421 1111112 2222 23333322 1344555 33 33566666
Q ss_pred CCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHH
Q 040616 95 DVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPT 172 (208)
Q Consensus 95 ~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~ 172 (208)
++++| ..|-+.. -++.+.+++++-.| -+.|=+-++.+.+.++++....+++|+..+..-.- .-..+...
T Consensus 231 ~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~ 301 (400)
T 3mwc_A 231 KCLFH-----EQPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKI 301 (400)
T ss_dssp CCSCE-----ESCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred CCCEE-----eCCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHH
Confidence 65544 5553322 36677777776444 34455668899999999988899999977654321 12478999
Q ss_pred HHHhCCcEEEcccCcc
Q 040616 173 CRELGIGIVAYSLLGR 188 (208)
Q Consensus 173 ~~~~gi~v~a~~pl~~ 188 (208)
|+++|+.+...+.+.+
T Consensus 302 A~~~gi~~~~~~~~es 317 (400)
T 3mwc_A 302 ATDNGIKLWGGTMPES 317 (400)
T ss_dssp HHHTTCEEEECCSCCC
T ss_pred HHHcCCEEEecCCCCC
Confidence 9999999988765544
No 54
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=86.30 E-value=13 Score=30.64 Aligned_cols=150 Identities=9% Similarity=0.054 Sum_probs=90.8
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+.++.+++.|++.|-.--........+ .+|. +-|..... ..++.+...+-+ +.|+.
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a~g~~~~L~vDaN---------~~w~~~~A~~~~-~~l~~ 211 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNEFSKNIKFRFDAN---------QGWNLAQTKQFI-EEINK 211 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHCCTTSEEEEECT---------TCCCHHHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHhcCCCCeEEEeCC---------CCcCHHHHHHHH-HHHhh
Confidence 456677778888899999875322111001111 1221 33333322 134444433222 23333
Q ss_pred cCCCc-ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHH
Q 040616 94 LDVDC-IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIV 170 (208)
Q Consensus 94 L~~d~-iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l 170 (208)
| .++.++..|-+..+ ++.+.+++++-.+ -+.|=+-++..++.++++....+++|+.....-. ..-..+.
T Consensus 212 ----~~~~l~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia 283 (379)
T 3r0u_A 212 ----YSLNVEIIEQPVKYYD----IKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIK 283 (379)
T ss_dssp ----SCCCEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHH
T ss_pred ----cCCCcEEEECCCCccc----HHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHH
Confidence 2 56777887754333 5667777765444 4555667889999999998889999997765432 1124789
Q ss_pred HHHHHhCCcEEEcccCccc
Q 040616 171 PTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 171 ~~~~~~gi~v~a~~pl~~G 189 (208)
..|+++|+.+...+.+.++
T Consensus 284 ~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 284 KLADSAGISCMVGCMMESP 302 (379)
T ss_dssp HHHHHTTCEEEECCCSCCH
T ss_pred HHHHHcCCEEEEeCCCccH
Confidence 9999999999988776543
No 55
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=86.29 E-value=13 Score=30.76 Aligned_cols=146 Identities=12% Similarity=0.027 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCC----CCC--------C----c---hhhh-------cce-EEEEeecceecCCCCc
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNV----YGP--------H----T---NEIL-------LAR-VKLTTKFGIRYEDGKY 74 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~--------g----~---~e~~-------~g~-~~i~tK~~~~~~~~~~ 74 (208)
+.++..+....+.+.|++.|..-.. +|. - . ..+. +|. +-|.....
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan-------- 217 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENH-------- 217 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECC--------
Confidence 5666777788889999998874321 221 0 0 1111 222 44443332
Q ss_pred cCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEee-CcccHHHHHHHhhcCCccE
Q 040616 75 SYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDL-SEASASTIRRAHTIHPITV 153 (208)
Q Consensus 75 ~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~ 153 (208)
..++.+...+-++. |+.+ ++.++..|-+. +.|+.+.+++++-.|-=.+- +-++.+.++++++....++
T Consensus 218 -~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 286 (403)
T 2ox4_A 218 -GHTDLVSAIQFAKA-IEEF-----NIFFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDV 286 (403)
T ss_dssp -TCSCHHHHHHHHHH-HGGG-----CEEEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSE
T ss_pred -CCCCHHHHHHHHHH-HHhh-----CCCEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCE
Confidence 13455554444332 4444 45566766432 23667777777655543332 4467889999999888999
Q ss_pred EeeccCcCCC-CccccHHHHHHHhCCcEEEcccC
Q 040616 154 VRLEWSLRSR-DVEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 154 ~q~~~~~~~~-~~~~~~l~~~~~~gi~v~a~~pl 186 (208)
+|+..+..-. ..-..+...|+++|+.++..+..
T Consensus 287 v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 287 IQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp ECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 9987765422 11247899999999999987774
No 56
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=86.27 E-value=9.1 Score=31.29 Aligned_cols=148 Identities=14% Similarity=0.080 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHHC-CCCeEeCCCCCCCC-chh-------hhcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDS-GITVLDTSNVYGPH-TNE-------ILLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASL 91 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g-~~e-------~~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 91 (208)
+.++..+..+.+++. |++.|-.--..... ... +.+|. +-|..... ..++.+...+ +-+.|
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan---------~~~~~~~a~~-~~~~l 208 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGN---------RGWSAAESLR-AMREM 208 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECT---------TCSCHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECC---------CCCCHHHHHH-HHHHH
Confidence 456677778888888 99987532211111 111 22332 33433332 1344443322 22333
Q ss_pred HHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccH
Q 040616 92 KCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEI 169 (208)
Q Consensus 92 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~ 169 (208)
+.++ +.++..|-+.. .++.+.++++.-.+- +.|=+-++.+.+.++++....+++|+..+.. .- .-..+
T Consensus 209 ~~~~-----i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~i 278 (367)
T 3dg3_A 209 ADLD-----LLFAEELCPAD----DVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGSTRV 278 (367)
T ss_dssp TTSC-----CSCEESCSCTT----SHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHHH
T ss_pred HHhC-----CCEEECCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHHH
Confidence 4444 44556664332 356677777765553 4444668899999999998899999987765 32 12378
Q ss_pred HHHHHHhCCcEEEcccCccc
Q 040616 170 VPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 170 l~~~~~~gi~v~a~~pl~~G 189 (208)
...|+++|+.+...+.+.++
T Consensus 279 a~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 279 HHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHcCCeEEECCcCCcH
Confidence 99999999999987655543
No 57
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=85.97 E-value=13 Score=30.57 Aligned_cols=144 Identities=8% Similarity=-0.048 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+.++.+.+.|++.|..--.-......+ .+|. +-|..... ..++.+...+- -+.|+.
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~g~d~~l~vDan---------~~~~~~~A~~~-~~~l~~ 220 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRVGADVEILVDAN---------QSLGRHDALAM-LRILDE 220 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECT---------TCCCHHHHHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHcCCCceEEEECC---------CCcCHHHHHHH-HHHHHh
Confidence 567788888999999999987531111001111 2222 44444432 13455554332 345666
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHH-HcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLV-EEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIV 170 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~-~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l 170 (208)
++++++ ..|-+.. .++.+.+++ +.-.|- +.|=+-++.+.+.++++....+++|+..+..--- .-..+.
T Consensus 221 ~~i~~i-----EqP~~~~----d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia 291 (389)
T 3ozy_A 221 AGCYWF-----EEPLSID----DIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAIS 291 (389)
T ss_dssp TTCSEE-----ESCSCTT----CHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHH
T ss_pred cCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHH
Confidence 665544 5554322 366777787 654443 3333457888999999998899999987765321 133799
Q ss_pred HHHHHhCCcEEEcc
Q 040616 171 PTCRELGIGIVAYS 184 (208)
Q Consensus 171 ~~~~~~gi~v~a~~ 184 (208)
..|+++|+.+...+
T Consensus 292 ~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 292 ASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHTTCEECCCC
T ss_pred HHHHHcCCEEEecC
Confidence 99999999998775
No 58
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=85.96 E-value=13 Score=30.22 Aligned_cols=142 Identities=10% Similarity=-0.004 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCc---hhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHT---NEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEAS 90 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~s 90 (208)
+.++..+..+.+.+.|++.|..- -|.+. ..+. +|. +-|..+.. ..++.+...+-++.
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~~e~v~avr~a~g~~~~l~vDan---------~~~~~~~a~~~~~~- 211 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTR--IGYPALDQDLAVVRSIRQAVGDDFGIMVDYN---------QSLDVPAAIKRSQA- 211 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEE--CCCSSHHHHHHHHHHHHHHHCSSSEEEEECT---------TCSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe--cCCCCHHHHHHHHHHHHHHhCCCCEEEEECC---------CCCCHHHHHHHHHH-
Confidence 34556677788889999998752 12111 1122 232 44444442 13456665554444
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEee-CcccHHHHHHHhhcCCccEEeeccCcCCC-Ccccc
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDL-SEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEE 168 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 168 (208)
|+.++++++ ..|-+. +.|+.+.++++.-.|-=++- +-++.+.++++++....+++|+..+..-. ..-..
T Consensus 212 l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 282 (359)
T 1mdl_A 212 LQQEGVTWI-----EEPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIR 282 (359)
T ss_dssp HHHHTCSCE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHH
T ss_pred HHHhCCCeE-----ECCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHH
Confidence 777776654 445322 34777788887655543333 44788999999999889999998776532 11247
Q ss_pred HHHHHHHhCCcEEEcc
Q 040616 169 IVPTCRELGIGIVAYS 184 (208)
Q Consensus 169 ~l~~~~~~gi~v~a~~ 184 (208)
+...|+++|+.++..+
T Consensus 283 i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 283 ASALAQQFGIPMSSHL 298 (359)
T ss_dssp HHHHHHHTTCCBCCBS
T ss_pred HHHHHHHcCCeEeecc
Confidence 8999999999988775
No 59
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=85.64 E-value=14 Score=30.36 Aligned_cols=146 Identities=10% Similarity=0.015 Sum_probs=90.2
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCC--chhhhc-------ceEEEEeecceecCCCCccCCCChHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPH--TNEILL-------ARVKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLK 92 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g--~~e~~~-------g~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 92 (208)
+.++..+....+.+.|++.|..- .|.. ...+.+ |++-|..... ..++.+...+-+ +.|+
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~e~v~avr~a~gd~~l~vD~n---------~~~~~~~a~~~~-~~l~ 214 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLK--VGRGEKLDLEITAAVRGEIGDARLRLDAN---------EGWSVHDAINMC-RKLE 214 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CCSCHHHHHHHHHHHHTTSTTCEEEEECT---------TCCCHHHHHHHH-HHHG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--cCCCHHHHHHHHHHHHHHcCCcEEEEecC---------CCCCHHHHHHHH-HHHH
Confidence 45667777888899999998742 1210 111222 2222332321 234566554433 3677
Q ss_pred HcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEee-CcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHH
Q 040616 93 CLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDL-SEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIV 170 (208)
Q Consensus 93 ~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l 170 (208)
.++++++ ..|-+. +.|+.+.++++.-.|-=++- +-++++.++++++....+++|+..+..-. ..-..+.
T Consensus 215 ~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 285 (384)
T 2pgw_A 215 KYDIEFI-----EQPTVS----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAA 285 (384)
T ss_dssp GGCCSEE-----ECCSCT----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHH
T ss_pred hcCCCEE-----eCCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHH
Confidence 7776654 455322 23677777777655543333 34688999999999889999997765432 1234789
Q ss_pred HHHHHhCCcEEEcccCcc
Q 040616 171 PTCRELGIGIVAYSLLGR 188 (208)
Q Consensus 171 ~~~~~~gi~v~a~~pl~~ 188 (208)
..|+++|+.++..+.+.+
T Consensus 286 ~~A~~~g~~~~~~~~~es 303 (384)
T 2pgw_A 286 AVAEAAGLKICIHSSFTT 303 (384)
T ss_dssp HHHHHTTCCEEECCCSCC
T ss_pred HHHHHCCCeEeeccCcCC
Confidence 999999999998875444
No 60
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=85.58 E-value=8.1 Score=31.91 Aligned_cols=149 Identities=7% Similarity=-0.001 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+..+.+.+.|++.|..--........+. +|. +-|..... ..++.+...+-++ .|+.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avR~a~g~d~~l~vDan---------~~~~~~~a~~~~~-~l~~ 214 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMVAEVRRAVGDDVDLFIDIN---------GAWTYDQALTTIR-ALEK 214 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHHHHHHHHHCTTSCEEEECT---------TCCCHHHHHHHHH-HHGG
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHHHHHHHhhCCCCEEEEECC---------CCCCHHHHHHHHH-HHHh
Confidence 4566777788888999998764211000011122 222 33333321 1345665554443 5666
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVP 171 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~ 171 (208)
+++++ +..|-+. +.++.+.+++++-.|- +.|=+-++.+.++++++....+++|+..+..-.- .-..+..
T Consensus 215 ~~i~~-----iEqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 285 (397)
T 2qde_A 215 YNLSK-----IEQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLT 285 (397)
T ss_dssp GCCSC-----EECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred CCCCE-----EECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHH
Confidence 66654 4555332 2367777777765543 2333457889999999988899999977754321 1237899
Q ss_pred HHHHhCCcEEEcccCccc
Q 040616 172 TCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl~~G 189 (208)
.|+++|+.++..+-+.++
T Consensus 286 ~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 286 LARLANLPVICGCMVGSG 303 (397)
T ss_dssp HHHHHTCCEEECCCSCCH
T ss_pred HHHHcCCeEEEecCcccH
Confidence 999999999988655443
No 61
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=85.14 E-value=4.4 Score=33.40 Aligned_cols=146 Identities=7% Similarity=-0.046 Sum_probs=89.8
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+.++.+.+.|++.|..--.-......+. +|. +-|..+... .++.+... +.++.
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~d~~~v~avR~a~g~~~~l~vDan~---------~~~~~~a~----~~~~~ 211 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGDVERDIARIRDVEDIREPGEIVLYDVNR---------GWTRQQAL----RVMRA 211 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHTTSCCTTCEEEEECTT---------CCCHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHHcCCCceEEEECCC---------CCCHHHHH----HHHHH
Confidence 5667778888889999999875321110011112 222 444444432 34544432 23333
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVP 171 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~ 171 (208)
| +..++ ++..|-+ .++.+.+++++-.+- +.|=+-++.+.++++++....+++|+..+..-. ..-..+..
T Consensus 212 l--~~~~i-~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~ 282 (378)
T 3eez_A 212 T--EDLHV-MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRD 282 (378)
T ss_dssp T--GGGTC-CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHH
T ss_pred h--ccCCe-EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHH
Confidence 3 22355 6666643 367777777765553 334456889999999999889999997765432 11347899
Q ss_pred HHHHhCCcEEEcccCccc
Q 040616 172 TCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl~~G 189 (208)
+|+++|+.+...+.+.++
T Consensus 283 ~A~~~g~~~~~~~~~es~ 300 (378)
T 3eez_A 283 IALTHGIDMFVMATGGSV 300 (378)
T ss_dssp HHHHTTCEEEEECSSCSH
T ss_pred HHHHcCCEEEcCCCCCCH
Confidence 999999999977666543
No 62
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=84.54 E-value=12 Score=30.76 Aligned_cols=143 Identities=11% Similarity=-0.013 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCch---hhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTN---EIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEAS 90 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~---e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~s 90 (208)
+.++..+..+.+.+.|++.|..-- |.+.. .+. +|. +-|..... ..++.+...+-++.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~~~e~v~avR~avg~d~~l~vDan---------~~~~~~~a~~~~~~- 229 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKV--GQPDGALDIARVTAVRKHLGDAVPLMVDAN---------QQWDRPTAQRMCRI- 229 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEC--CCSCHHHHHHHHHHHHHHHCTTSCEEEECT---------TCCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHHHHHHHHcCCCCEEEEECC---------CCCCHHHHHHHHHH-
Confidence 556677788888999999876421 11111 121 232 22332321 23566666555544
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceE-eeCcccHHHHHHHhhcCCccEEeeccCcCCCC-cccc
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHI-DLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEE 168 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 168 (208)
|+.++++++ ..|-+. +.++.+.+++++-.|-=. +=+-++.+.++++++....+++|+..+..-.- .-..
T Consensus 230 l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 300 (393)
T 2og9_A 230 FEPFNLVWI-----EEPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLK 300 (393)
T ss_dssp HGGGCCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHH
T ss_pred HHhhCCCEE-----ECCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHH
Confidence 777776654 445332 236677777776555333 33456889999999998899999877653221 1247
Q ss_pred HHHHHHHhCCcEEEccc
Q 040616 169 IVPTCRELGIGIVAYSL 185 (208)
Q Consensus 169 ~l~~~~~~gi~v~a~~p 185 (208)
+...|+++|+.++..+.
T Consensus 301 i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 301 IASLAEHAGLMLAPHFA 317 (393)
T ss_dssp HHHHHHHTTCEECCCSC
T ss_pred HHHHHHHcCCEEeccCc
Confidence 99999999999886654
No 63
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=84.31 E-value=15 Score=29.82 Aligned_cols=147 Identities=14% Similarity=0.093 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHH-CCCCeEeCCCCCCCCc---hhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHH
Q 040616 22 PESCMIALIHHAID-SGITVLDTSNVYGPHT---NEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEA 89 (208)
Q Consensus 22 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~---~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (208)
+.++..+..+.+.+ .|++.|..-- |.+. ..+. +|. +-|..... ..++.+...+-++
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~g~~~~l~vDan---------~~~~~~~a~~~~~- 209 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKL--GARTPAQDLEHIRSIVKAVGDRASVRVDVN---------QGWDEQTASIWIP- 209 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEC--SSSCHHHHHHHHHHHHHHHGGGCEEEEECT---------TCCCHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCccEEEEec--CCCChHHHHHHHHHHHHhcCCCCEEEEECC---------CCCCHHHHHHHHH-
Confidence 45667777888888 9999987421 2111 1122 232 44444432 1345666555443
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-Cccc
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEE 167 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~ 167 (208)
.|+.+++++ +..|-+. +.|+.+.+++++-.|- ..|=+-++.+.+.++++....+++|+..+..-. ..-.
T Consensus 210 ~l~~~~i~~-----iEqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~ 280 (370)
T 1nu5_A 210 RLEEAGVEL-----VEQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTL 280 (370)
T ss_dssp HHHHHTCCE-----EECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHH
T ss_pred HHHhcCcce-----EeCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHH
Confidence 577776554 4555332 2366777777765443 223345788999999999889999997765432 1124
Q ss_pred cHHHHHHHhCCcEEEcccCccc
Q 040616 168 EIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~pl~~G 189 (208)
.+...|+++|+.++..+.+.++
T Consensus 281 ~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 281 KVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHcCCcEEecCCcchH
Confidence 7899999999999988776543
No 64
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=83.95 E-value=16 Score=29.71 Aligned_cols=145 Identities=12% Similarity=0.060 Sum_probs=86.3
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+..+.+.+.|++.|-.-- +.....+ .+|. +-|..... ..++.+. .+-+ +.|+.
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v~avr~~~g~~~~l~vDan---------~~~~~~~-~~~~-~~l~~ 207 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPVRAVRERFGDDVLLQVDAN---------TAYTLGD-APQL-ARLDP 207 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHHHHHHHHHCTTSEEEEECT---------TCCCGGG-HHHH-HTTGG
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHHHHHHHhcCCCceEEEecc---------CCCCHHH-HHHH-HHHHh
Confidence 456677778888899999875311 1111122 2232 33322221 1345555 4333 33666
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVP 171 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~ 171 (208)
++++ ++..|-+. +.++.+.+++++-.|- +.+=+-++.+.++++++....+++|+..+..-.- .-..+..
T Consensus 208 ~~i~-----~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 278 (368)
T 1sjd_A 208 FGLL-----LIEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHD 278 (368)
T ss_dssp GCCS-----EEECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHH
T ss_pred cCCC-----eEeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHH
Confidence 6554 45565332 2367777777764443 2333457889999999988899999977765321 1247899
Q ss_pred HHHHhCCcEEEcccCcc
Q 040616 172 TCRELGIGIVAYSLLGR 188 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl~~ 188 (208)
.|+++|+.++..+-+.+
T Consensus 279 ~A~~~g~~~~~~~~~es 295 (368)
T 1sjd_A 279 VCAAHGIPVWCGGMIET 295 (368)
T ss_dssp HHHHTTCCEEECCCCCC
T ss_pred HHHHcCCcEEeCCcccc
Confidence 99999999766554444
No 65
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=83.73 E-value=14 Score=30.75 Aligned_cols=87 Identities=13% Similarity=-0.009 Sum_probs=63.1
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHc-----CCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHH
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEE-----GKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVP 171 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~ 171 (208)
+++ ++-.|-+.....+-|+.+.++.++ -.| -+.|=+-++.+.+.++++...++++|+..+-.-.- .-..+..
T Consensus 268 ~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~ 346 (413)
T 1kko_A 268 LPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVL 346 (413)
T ss_dssp SCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHH
T ss_pred cce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHH
Confidence 665 777775432235668888888776 333 34455667889999999988899999988765332 1248999
Q ss_pred HHHHhCCcEEEcccC
Q 040616 172 TCRELGIGIVAYSLL 186 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl 186 (208)
+|+++|+.++..+..
T Consensus 347 ~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 347 YCNKHGMEAYQGGTC 361 (413)
T ss_dssp HHHHHTCEEEECCCT
T ss_pred HHHHcCCeEEecCCC
Confidence 999999999988775
No 66
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=83.30 E-value=18 Score=29.87 Aligned_cols=146 Identities=8% Similarity=0.028 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCC----CCC------------Cc--------hhhh-------cce-EEEEeecceec
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNV----YGP------------HT--------NEIL-------LAR-VKLTTKFGIRY 69 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~------------g~--------~e~~-------~g~-~~i~tK~~~~~ 69 (208)
+.++..+....+.+.|++.|..-.. +|. |. ..+. +|. +-|.....
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan--- 226 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIH--- 226 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECT---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECC---
Confidence 5566777888889999998874321 221 00 0111 222 33433332
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEe-eCcccHHHHHHHhhc
Q 040616 70 EDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHID-LSEASASTIRRAHTI 148 (208)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~ 148 (208)
..++++...+-++. |+.+ ++.++..|-+. +.++.+.+++++-.|-=.+ =+-++.+.++++++.
T Consensus 227 ------~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 290 (410)
T 2gl5_A 227 ------SLLGTNSAIQFAKA-IEKY-----RIFLYEEPIHP----LNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEK 290 (410)
T ss_dssp ------TCSCHHHHHHHHHH-HGGG-----CEEEEECSSCS----SCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHT
T ss_pred ------CCCCHHHHHHHHHH-HHhc-----CCCeEECCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc
Confidence 13455554444433 4544 55567776433 2366777777765553333 344678899999998
Q ss_pred CCccEEeeccCcCCCC-ccccHHHHHHHhCCcEEEcccC
Q 040616 149 HPITVVRLEWSLRSRD-VEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 149 ~~~~~~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl 186 (208)
...+++|+..+..-.- .-..+..+|+++|+.++..+..
T Consensus 291 ~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 329 (410)
T 2gl5_A 291 QSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVCG 329 (410)
T ss_dssp TCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 8899999987754321 1237899999999999987763
No 67
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=83.29 E-value=15 Score=30.39 Aligned_cols=143 Identities=9% Similarity=-0.068 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCc---hhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHT---NEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEAS 90 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~s 90 (208)
+.++..+....+.+.|++.|..- -|.+. ..+. +|. +-|..... ..++.+...+-++.
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik--~g~~~~~~d~e~v~avR~avG~d~~l~vDan---------~~~~~~~ai~~~~~- 242 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLK--VGQPNCAEDIRRLTAVREALGDEFPLMVDAN---------QQWDRETAIRMGRK- 242 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE--CCCSCHHHHHHHHHHHHHHHCSSSCEEEECT---------TCSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCCeEEEe--cCCCCHHHHHHHHHHHHHHcCCCCeEEEECC---------CCCCHHHHHHHHHH-
Confidence 55667777888889999988642 12111 1122 232 33333332 13456665555443
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceE-eeCcccHHHHHHHhhcCCccEEeeccCcCCCC-cccc
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHI-DLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEE 168 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 168 (208)
|+.+++++ +..|-+. +.|+.+.+++++-.|-=. +=+-++.+.++++++....+++|+..+-.-.- .-..
T Consensus 243 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ 313 (398)
T 2pp0_A 243 MEQFNLIW-----IEEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLK 313 (398)
T ss_dssp HGGGTCSC-----EECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHH
T ss_pred HHHcCCce-----eeCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 67776654 4555332 236677777776555333 33456889999999988899999977654221 1247
Q ss_pred HHHHHHHhCCcEEEccc
Q 040616 169 IVPTCRELGIGIVAYSL 185 (208)
Q Consensus 169 ~l~~~~~~gi~v~a~~p 185 (208)
+...|+++|+.++..+.
T Consensus 314 i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 314 IMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp HHHHHHHTTCEECCCSC
T ss_pred HHHHHHHcCCeEeecCc
Confidence 99999999999886654
No 68
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=83.27 E-value=20 Score=30.36 Aligned_cols=147 Identities=15% Similarity=0.097 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHHH-CCCC-----eEeCCCC--CCCCchhhhcceEEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAID-SGIT-----VLDTSNV--YGPHTNEILLARVKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~-~Gi~-----~~DtA~~--Yg~g~~e~~~g~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.+++.++|..|++ +|+. -+|+|.. |. .+ -|+..+.-|... .......+++++.+-.++.++.
T Consensus 226 ~~~eaL~ll~~Ai~~aGy~~~i~i~lD~Aasefy~---~~--~g~Y~l~fk~~~----~~~~~~~t~~Elid~y~~lle~ 296 (452)
T 3otr_A 226 TAEEALNLLVEAIKAAGYEGKIKIAFDAAASEFYK---QD--EKKYDLDYKCKT----KNASKHLTGEKLKEVYEGWLKK 296 (452)
T ss_dssp SHHHHHHHHHHHHHHHTCTTTSEEEEECCGGGGEE---TT--TTEEETTTTCSS----CCGGGEECHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCceEEEccccchHhhee---cc--CCeEEeeccCCC----CcccccccHHHHHHHHHHHHhh
Confidence 56889999999995 6886 2576642 31 00 122211111100 0001125677777777777775
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEe--eCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHID--LSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIV 170 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG--vs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l 170 (208)
. +++++-.|-+..+++ .|..|.+... .+|--+| .+..++..+.++++....+++++..|-.-.- ...+..
T Consensus 297 y-----pIv~IEDPl~~dD~e-g~a~Lt~~lg-~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQIGgITEalka~ 369 (452)
T 3otr_A 297 Y-----PIISVEDPFDQDDFA-SFSAFTKDVG-EKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTEAIEAC 369 (452)
T ss_dssp S-----CEEEEECCSCTTCHH-HHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHHHHHHHH
T ss_pred h-----CceEEecCCChhhHH-HHHHHHHhhC-CCeEEEeCccccCCHHHHHHHHhcCCCCEEEeeccccccHHHHHHHH
Confidence 4 488999886655433 3444443321 2455555 2345789999999988888999887754331 123788
Q ss_pred HHHHHhCCcEEEcc
Q 040616 171 PTCRELGIGIVAYS 184 (208)
Q Consensus 171 ~~~~~~gi~v~a~~ 184 (208)
..|+++|+.++...
T Consensus 370 ~lA~~~G~~vmvsh 383 (452)
T 3otr_A 370 LLAQKSGWGVQVSH 383 (452)
T ss_dssp HHHHHTTCEEEEEC
T ss_pred HHHHHcCCeEEEeC
Confidence 99999999977644
No 69
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=83.12 E-value=7 Score=31.83 Aligned_cols=149 Identities=12% Similarity=-0.007 Sum_probs=89.0
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+..+.+++.|++.|..--.-......+. +|. +-|..... ..++.+...+ +-+.|+.
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~~~d~~~v~avR~~~g~~~~l~vDan---------~~~~~~~a~~-~~~~l~~ 209 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETLAGRAVVRVDPN---------QSYDRDGLLR-LDRLVQE 209 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHHTTSSEEEEECT---------TCCCHHHHHH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHhCCCCEEEEeCC---------CCCCHHHHHH-HHHHHHh
Confidence 5566777788889999998864321110011111 222 34444432 1345544433 3345666
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcC-CccEEeeccCcCCCC-ccccHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIH-PITVVRLEWSLRSRD-VEEEIV 170 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~-~~~~~q~~~~~~~~~-~~~~~l 170 (208)
+++++| ..|-+.. .++.+.+++++-.+ -+.|=+-++.+++.++++.. ..+++|+..+..-.- .-..+.
T Consensus 210 ~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~ 280 (356)
T 3ro6_B 210 LGIEFI-----EQPFPAG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIA 280 (356)
T ss_dssp TTCCCE-----ECCSCTT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHH
T ss_pred cCCCEE-----ECCCCCC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHH
Confidence 665555 4553322 35556666554333 34444668889999999988 899999977654321 123789
Q ss_pred HHHHHhCCcEEEcccCccc
Q 040616 171 PTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 171 ~~~~~~gi~v~a~~pl~~G 189 (208)
..|+++|+.+...+.+.++
T Consensus 281 ~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 281 TIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp HHHHHHTCEEEECCCSCCH
T ss_pred HHHHHcCCEEEecCCcccH
Confidence 9999999999987766543
No 70
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=82.86 E-value=5 Score=33.23 Aligned_cols=150 Identities=9% Similarity=-0.002 Sum_probs=92.9
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhh-------hcce-EEEE-eecceecCCCCccCCCChHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEI-------LLAR-VKLT-TKFGIRYEDGKYSYCGDPAYLRAACEASLK 92 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~-------~~g~-~~i~-tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 92 (208)
+.++..+..+.+++.|++.|..--........+ .+|. +-|. .... ..++++...+ +-+.|+
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~g~~~~l~~vDan---------~~~~~~~A~~-~~~~l~ 211 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEFGSRVRIKSYDFS---------HLLNWKDAHR-AIKRLT 211 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHHGGGCEEEEEECT---------TCSCHHHHHH-HHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHcCCCCcEEEecCC---------CCcCHHHHHH-HHHHHH
Confidence 456677778888999999886421111001111 2232 4444 3332 1345444332 223444
Q ss_pred HcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHH
Q 040616 93 CLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVP 171 (208)
Q Consensus 93 ~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~ 171 (208)
.+++ ++.++..|-+.. .++.+.++++.-.|.= |=+-++.+.+.++++...++++|+..+..-. ..-..+..
T Consensus 212 ~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~ 283 (391)
T 3gd6_A 212 KYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAY 283 (391)
T ss_dssp TCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred hcCC---CcceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHH
Confidence 4443 336667764432 3677778887666654 8888999999999999889999998776432 11247899
Q ss_pred HHHHhCCcEEEcccCccc
Q 040616 172 TCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl~~G 189 (208)
.|+++|+.+...+.+.++
T Consensus 284 ~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 284 AAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHTTCEEEECCCCCCH
T ss_pred HHHHcCCEEEecCCCccH
Confidence 999999999987765443
No 71
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=82.23 E-value=20 Score=29.57 Aligned_cols=142 Identities=11% Similarity=0.051 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCC--CCCCCCc---hhhh-------cce-EEEEeecceecCCCCccCCC--ChHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTS--NVYGPHT---NEIL-------LAR-VKLTTKFGIRYEDGKYSYCG--DPAYLRAA 86 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA--~~Yg~g~---~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~--~~~~i~~~ 86 (208)
+.++..+....+.+.|++.|..- + .|... ..+. +|. +-|..+.. ..+ +.+...+-
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~sp-vG~~~~~~~~e~v~avr~a~G~d~~l~vDan---------~~~~~~~~~a~~~ 214 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGP-IGRGTVAADADQIMAAREGLGPDGDLMVDVG---------QIFGEDVEAAAAR 214 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTT-TTSSCHHHHHHHHHHHHHHHCSSSEEEEECT---------TTTTTCHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCC-CCCCHHHHHHHHHHHHHHHhCCCCeEEEECC---------CCCCCCHHHHHHH
Confidence 55667777888899999998742 1 23111 1122 222 44444432 134 56655544
Q ss_pred HHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHH-cCCcceEe-eCcccHHHHHHHhhcCCccEEeeccCcCCC-
Q 040616 87 CEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVE-EGKIKHID-LSEASASTIRRAHTIHPITVVRLEWSLRSR- 163 (208)
Q Consensus 87 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~-~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~~~~~~- 163 (208)
++. |+.+++++ +..|-+. +.|+.+.++++ .-.|-=++ =+-++.+.++++++....+++|+..+..-.
T Consensus 215 ~~~-l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 215 LPT-LDAAGVLW-----LEEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGL 284 (401)
T ss_dssp HHH-HHHTTCSE-----EECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSH
T ss_pred HHH-HHhcCCCE-----EECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCH
Confidence 444 77777654 4555332 34777778877 54443333 244678999999998889999997776432
Q ss_pred CccccHHHHHHHhCCcEEEc
Q 040616 164 DVEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 164 ~~~~~~l~~~~~~gi~v~a~ 183 (208)
..-..+..+|+++|+.++..
T Consensus 285 t~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 285 GPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHcCCEEecC
Confidence 11247899999999998876
No 72
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=82.22 E-value=14 Score=30.57 Aligned_cols=146 Identities=10% Similarity=0.045 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHCCCCeEe--CCCCCCC-------Cc--------hhhh-------cce-EEEEeecceecCCCCccC
Q 040616 22 PESCMIALIHHAIDSGITVLD--TSNVYGP-------HT--------NEIL-------LAR-VKLTTKFGIRYEDGKYSY 76 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~D--tA~~Yg~-------g~--------~e~~-------~g~-~~i~tK~~~~~~~~~~~~ 76 (208)
+.++..+....+.+.|++.|- .+..||. +. ..+. +|. +-|..... .
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan---------~ 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMH---------G 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECT---------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECC---------C
Confidence 456677777888899999875 3323332 10 1111 222 33433332 1
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceE-eeCcccHHHHHHHhhcCCccEEe
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHI-DLSEASASTIRRAHTIHPITVVR 155 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q 155 (208)
.++.+...+-++. |+.++++ ++..|-+. +-++.+.+++++-.|-=. |=+-++.+.++++++....+++|
T Consensus 220 ~~~~~~a~~~~~~-l~~~~i~-----~iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 289 (410)
T 2qq6_A 220 RFDIPSSIRFARA-MEPFGLL-----WLEEPTPP----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVM 289 (410)
T ss_dssp CCCHHHHHHHHHH-HGGGCCS-----EEECCSCT----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CCCHHHHHHHHHH-HhhcCCC-----eEECCCCh----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEe
Confidence 3456665544433 6666554 45555332 236777777776555333 33456889999999988899999
Q ss_pred eccCcCCC-CccccHHHHHHHhCCcEEEcccC
Q 040616 156 LEWSLRSR-DVEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 156 ~~~~~~~~-~~~~~~l~~~~~~gi~v~a~~pl 186 (208)
+..+-.-. ..-..+...|+++|+.++..+..
T Consensus 290 ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 290 PDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp CBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred cCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 87765322 11237889999999999887764
No 73
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=81.02 E-value=18 Score=29.93 Aligned_cols=144 Identities=6% Similarity=-0.039 Sum_probs=86.7
Q ss_pred CHHHHHHHH-HHHHHCCCCeEeCCCCC-------CCCchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHH
Q 040616 22 PESCMIALI-HHAIDSGITVLDTSNVY-------GPHTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRA 85 (208)
Q Consensus 22 ~~~~~~~~l-~~A~~~Gi~~~DtA~~Y-------g~g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~ 85 (208)
+.++..+.+ +.+++.|++.|-.--.. ......+ .+|. +-|..... ..++.+...+
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN---------~~~~~~~A~~ 209 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDAN---------NGYSVGGAIR 209 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECT---------TCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECC---------CCCCHHHHHH
Confidence 456677777 88889999987532111 0000111 1222 33333332 1345544433
Q ss_pred HHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-
Q 040616 86 ACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSR- 163 (208)
Q Consensus 86 ~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~- 163 (208)
- -+.|+.++++++ ..|-+.. .++.+.+++++-.+- +.|=+-++.+.+.++++.. ++++|+..+..-.
T Consensus 210 ~-~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~GGi 278 (393)
T 4dwd_A 210 V-GRALEDLGYSWF-----EEPVQHY----HVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKMGGI 278 (393)
T ss_dssp H-HHHHHHTTCSEE-----ECCSCTT----CHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTTTHH
T ss_pred H-HHHHHhhCCCEE-----ECCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCccccCCH
Confidence 2 245666665444 4554322 356777777765542 3344567889999999888 9999998776532
Q ss_pred CccccHHHHHHHhCCcEEEccc
Q 040616 164 DVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 164 ~~~~~~l~~~~~~gi~v~a~~p 185 (208)
..-..+...|+++|+.+...+.
T Consensus 279 t~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 279 TGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEeecCC
Confidence 1134799999999999998776
No 74
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=80.80 E-value=19 Score=29.89 Aligned_cols=149 Identities=11% Similarity=0.083 Sum_probs=90.2
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+..+.+.+.|++.|=.....+.....+. +|. +-|..=.. ..++++...+ .++.
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~g~~~~l~vDaN---------~~~~~~~A~~----~~~~ 254 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERLGPAVRIACDMH---------WAHTASEAVA----LIKA 254 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHHCSSSEEEEECC---------SCCCHHHHHH----HHHH
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhccCCeEEEEeccc---------cCCCHHHHHH----HHHh
Confidence 4566777788888999998754322221111111 222 22211111 2344444332 3333
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccccHHHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPT 172 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~ 172 (208)
| +..++.++-.|-+..+ ++.+.+++++-.+ -+.|=|-++...+.++++....+++|....-.--..-..+...
T Consensus 255 l--~~~~l~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~GGit~~~kia~~ 328 (412)
T 4h1z_A 255 M--EPHGLWFAEAPVRTED----IDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMGHKGITQFMRIGAY 328 (412)
T ss_dssp H--GGGCEEEEECCSCTTC----HHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHHHHHHHHHHHH
T ss_pred h--cccccceecCCCCccc----hHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEecCCCCChHHHHHHHHH
Confidence 4 3467888888855433 5667777776554 4556677899999999998888999987532100012368889
Q ss_pred HHHhCCcEEEcccCccc
Q 040616 173 CRELGIGIVAYSLLGRG 189 (208)
Q Consensus 173 ~~~~gi~v~a~~pl~~G 189 (208)
|+.+|+.+...++++.+
T Consensus 329 A~~~gi~v~~h~~~~~~ 345 (412)
T 4h1z_A 329 AHVHHIKVIPHATIGAG 345 (412)
T ss_dssp HHHTTCEECCCCCSSCS
T ss_pred HHHCCCcEEecCCcchH
Confidence 99999999998887765
No 75
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=80.58 E-value=4.5 Score=33.14 Aligned_cols=87 Identities=10% Similarity=0.122 Sum_probs=63.8
Q ss_pred cccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHHH
Q 040616 98 CIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCRE 175 (208)
Q Consensus 98 ~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~~ 175 (208)
..++.++-.|-+..+ ++.+.+++++-.+ -+.|=|-++...+.++++...++++|+..+. -. ..-..+...|++
T Consensus 214 ~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~ 288 (365)
T 3ik4_A 214 SIPMVLFEQPLPRED----WAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQA 288 (365)
T ss_dssp TCCEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHH
T ss_pred CCCceEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHH
Confidence 457888888754333 5667777766444 4555667889999999998889999998776 22 112378999999
Q ss_pred hCCcEEEcccCccc
Q 040616 176 LGIGIVAYSLLGRG 189 (208)
Q Consensus 176 ~gi~v~a~~pl~~G 189 (208)
+|+.++..+.+.++
T Consensus 289 ~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 289 AGLGLMIGGMVESI 302 (365)
T ss_dssp HTCEEEECCSSCCH
T ss_pred cCCeEEecCCcccH
Confidence 99999988877554
No 76
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=80.16 E-value=5.8 Score=31.36 Aligned_cols=103 Identities=11% Similarity=0.001 Sum_probs=63.4
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeec
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 157 (208)
++.+. +..+-+.|.++|+++|.+-....+.......+.|+.+..+.+...++...+. -+.+.++++++.. ++.+.+.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G-~~~V~i~ 99 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAH-ADEIAVF 99 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTT-CSEEEEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCC-CCEEEEE
Confidence 44444 4455667788999999987655443111123567777777665566665655 4677788887753 4556664
Q ss_pred cCcC--------CCCc------cccHHHHHHHhCCcEEEc
Q 040616 158 WSLR--------SRDV------EEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 158 ~~~~--------~~~~------~~~~l~~~~~~gi~v~a~ 183 (208)
.+.- .... -.+.+++|+++|+.|.++
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~ 139 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGY 139 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 3221 1111 125689999999999743
No 77
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=79.64 E-value=21 Score=29.78 Aligned_cols=141 Identities=11% Similarity=-0.012 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcC
Q 040616 24 SCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLD 95 (208)
Q Consensus 24 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~ 95 (208)
++..+..+.+.+.|++.|..--........+. +|. +-|..... ..++.+...+-++. |+.++
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~avG~d~~l~vDan---------~~~~~~eai~~~~~-L~~~~ 256 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGDAARVDIERVRHVRKVLGDEVDILTDAN---------TAYTMADARRVLPV-LAEIQ 256 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECT---------TCCCHHHHHHHHHH-HHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEECC---------CCCCHHHHHHHHHH-HHhcC
Confidence 55667778888999998764111000011122 232 33333331 23566666555544 77777
Q ss_pred CCcccEEEeecCCCCCCHHHHHHHHHHHHHcCC-cc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHH
Q 040616 96 VDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGK-IK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPT 172 (208)
Q Consensus 96 ~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~ 172 (208)
++++ ..|-+. +.++.+.+++++-. |- +.+=+-++.+.++++++....+++|+..+..-.- .-..+...
T Consensus 257 i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~ 327 (428)
T 3bjs_A 257 AGWL-----EEPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAM 327 (428)
T ss_dssp CSCE-----ECCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHH
T ss_pred CCEE-----ECCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHH
Confidence 6654 455332 23667777776543 42 3333457889999999988899999987765321 12378999
Q ss_pred HHHhCCcEEEc
Q 040616 173 CRELGIGIVAY 183 (208)
Q Consensus 173 ~~~~gi~v~a~ 183 (208)
|+++|+.++..
T Consensus 328 A~~~gi~~~~~ 338 (428)
T 3bjs_A 328 ASAYRIPINAH 338 (428)
T ss_dssp HHHTTCCBCCB
T ss_pred HHHcCCeEEec
Confidence 99999998877
No 78
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=79.37 E-value=4 Score=31.23 Aligned_cols=98 Identities=10% Similarity=-0.023 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHcCCCcccEEEeecC--------------CCCCCHHHHHHHHHHHHHc-CCcceEeeCcccHHHHHHHhh
Q 040616 83 LRAACEASLKCLDVDCIDLYYQHRI--------------DTKIPIEVTIGELKRLVEE-GKIKHIDLSEASASTIRRAHT 147 (208)
Q Consensus 83 i~~~~~~sL~~L~~d~iDl~~lh~~--------------~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~ 147 (208)
+.++++...+.+..+..|++.-..- +-....-+++++|..+++. ++|--+|..|.... +..+.+
T Consensus 48 le~av~~a~~~~~~~~~dVIISRGgta~~Lr~~~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~-~~~i~~ 126 (225)
T 2pju_A 48 FEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPA-LVAFQK 126 (225)
T ss_dssp HHHHHHHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHH-HHHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEeCChHHHHHHhhCCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhH-HHHHHH
Confidence 4556666666665545676554431 0013356789999888875 56777777775432 333333
Q ss_pred cCCccEEeeccCcCCCCccccHHHHHHHhCCcEEEc
Q 040616 148 IHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 148 ~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~ 183 (208)
....++.+..|+-... -+..+..+++.|+.++.-
T Consensus 127 ll~~~i~~~~~~~~ee--~~~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 127 TFNLRLDQRSYITEED--ARGQINELKANGTEAVVG 160 (225)
T ss_dssp HHTCCEEEEEESSHHH--HHHHHHHHHHTTCCEEEE
T ss_pred HhCCceEEEEeCCHHH--HHHHHHHHHHCCCCEEEC
Confidence 3445666666554333 348999999999999763
No 79
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=79.32 E-value=18 Score=30.52 Aligned_cols=96 Identities=10% Similarity=0.001 Sum_probs=68.7
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCc--ccHHHHHHHhhcCCccEEe
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSE--ASASTIRRAHTIHPITVVR 155 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~q 155 (208)
.+++...+.+.+.++.+ +++++-.|-+..+ |+.+.+|.++.+|-=.|=-. .+++.+.++++..-.+++|
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~dD----~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 340 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQDD----WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLL 340 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCccc----HHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEE
Confidence 45666656666666654 5888988855433 77788888887776555322 3889999999998899999
Q ss_pred eccCcCCCC-ccccHHHHHHHhCCcEEE
Q 040616 156 LEWSLRSRD-VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 156 ~~~~~~~~~-~~~~~l~~~~~~gi~v~a 182 (208)
+..|-.-.- .-.++..+|+++|+.++.
T Consensus 341 iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 341 LKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 977754321 123789999999998765
No 80
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=79.09 E-value=4.6 Score=33.46 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=67.0
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-Cccc
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEE 167 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~ 167 (208)
.+++|..+..++.++-.|-+..+ ++.+.++.+.-.+ -+.|=|-++...+.++++...++++|+..+. -. ..-.
T Consensus 207 ~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~ 281 (389)
T 3s5s_A 207 LVAHARRLGADVALLEQPVPRDD----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEAL 281 (389)
T ss_dssp HHHHHHHTTCEEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHH
T ss_pred HHHHHhhCCCCeEEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHH
Confidence 34444223468889988855433 5566667765444 4666677899999999998889999998776 21 1123
Q ss_pred cHHHHHHHhCCcEEEcccCccc
Q 040616 168 EIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~pl~~G 189 (208)
.+...|+++|+.++..+.+.++
T Consensus 282 ~i~~~A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 282 DIAAVARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHHHHHHTTCEEEECCSSCCH
T ss_pred HHHHHHHHcCCeEEecCCcccH
Confidence 7899999999999988877554
No 81
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=78.95 E-value=9.6 Score=28.59 Aligned_cols=72 Identities=8% Similarity=0.051 Sum_probs=46.2
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEee-CcccHHHHHHHhhcCCccEEeec
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDL-SEASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~ 157 (208)
+++.++.+ ..+|.||+=+++.-......+.+. .+.|.+.. ...+..+|| .|-+++.+.++.+...++++|+.
T Consensus 11 ~~eda~~a-----~~~GaD~iGfif~~~SpR~V~~~~-a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 11 NLEDALFS-----VESGADAVGFVFYPKSKRYISPED-ARRISVEL-PPFVFRVGVFVNEEPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp SHHHHHHH-----HHHTCSEEEEECCTTCTTBCCHHH-HHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHH-----HHcCCCEEEEEecCCCCCcCCHHH-HHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 45555433 467999999885321122234433 33332222 246889998 57788999999998899999985
No 82
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=78.49 E-value=13 Score=30.37 Aligned_cols=86 Identities=13% Similarity=0.112 Sum_probs=60.8
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHhC
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRELG 177 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~g 177 (208)
++.++..|-+.. -++.+.+++++-.+ -+.|=+-++.+.+.++++....+++|+..+..-.- .-..+...|+++|
T Consensus 215 ~i~~iEqP~~~~----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g 290 (370)
T 1chr_A 215 GVELIEQPVGRE----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASG 290 (370)
T ss_dssp TEEEEECCSCTT----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcC
Confidence 455666664432 25667777776544 34444668899999999988899999987765321 1337899999999
Q ss_pred CcEEEcccCccc
Q 040616 178 IGIVAYSLLGRG 189 (208)
Q Consensus 178 i~v~a~~pl~~G 189 (208)
+.++..+.+.++
T Consensus 291 ~~~~~~~~~es~ 302 (370)
T 1chr_A 291 IASYGGTMLDST 302 (370)
T ss_dssp CEEEECCSCCTT
T ss_pred CeEEecCCCccH
Confidence 999987766554
No 83
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=76.98 E-value=25 Score=27.68 Aligned_cols=101 Identities=15% Similarity=0.075 Sum_probs=64.6
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEee-cCC-----CCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCc
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQH-RID-----TKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPI 151 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~-----~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~ 151 (208)
.+.+.+.+..++ +-.-|-|.||+-.-- +|. ....+..+...++.+++++. -|.|-+++++.++++++....
T Consensus 26 ~~~~~a~~~a~~-~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa~ 102 (280)
T 1eye_A 26 LDLDDAVKHGLA-MAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGAQ 102 (280)
T ss_dssp CSHHHHHHHHHH-HHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHH-HHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCCC
Confidence 345555554433 334588999998522 232 22335556777777777643 577889999999999998664
Q ss_pred cEEeeccCcCCCCccccHHHHHHHhCCcEEEccc
Q 040616 152 TVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 152 ~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
-+|=+. -... ..++++.++++|.+++.+.-
T Consensus 103 iINdvs--g~~~--d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 103 MVNDVS--GGRA--DPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp EEEETT--TTSS--CTTHHHHHHHHTCCEEEECC
T ss_pred EEEECC--CCCC--CHHHHHHHHHhCCeEEEEcC
Confidence 444432 2222 34899999999999999764
No 84
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=76.34 E-value=2.2 Score=31.84 Aligned_cols=68 Identities=10% Similarity=0.088 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHHc-CCcceEeeCccc--HHHHHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhCCcEEEc
Q 040616 111 IPIEVTIGELKRLVEE-GKIKHIDLSEAS--ASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 111 ~~~~~~~~~l~~l~~~-G~ir~iGvs~~~--~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~ 183 (208)
...-+++++|..+++. ++|--+|..|.. .+.+..++ ..++.+..|+-.+. -+..+..+++.|+.++.-
T Consensus 78 ~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll---~~~i~~~~~~~~~e--~~~~i~~l~~~G~~vvVG 148 (196)
T 2q5c_A 78 VTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAML---GVKIKEFLFSSEDE--ITTLISKVKTENIKIVVS 148 (196)
T ss_dssp CCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHH---TCEEEEEEECSGGG--HHHHHHHHHHTTCCEEEE
T ss_pred CCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHh---CCceEEEEeCCHHH--HHHHHHHHHHCCCeEEEC
Confidence 3467899999999986 556666766643 34455554 44666666654433 457999999999999763
No 85
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=76.22 E-value=29 Score=29.01 Aligned_cols=142 Identities=6% Similarity=0.057 Sum_probs=83.7
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+....+.+.|++.|-.--.-......+ .+|. +-|..... ..++.+...+-++. |+.
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~a~G~d~~l~vDan---------~~~~~~~a~~~~~~-l~~ 267 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAIGPDIAMAVDAN---------QRWDVGPAIDWMRQ-LAE 267 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCSSSEEEEECT---------TCCCHHHHHHHHHT-TGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHHHHHHHhcCCCCeEEEECC---------CCCCHHHHHHHHHH-HHh
Confidence 556677778888999999876321100001111 1332 33332221 13455554444433 555
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc-CCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE-GKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIV 170 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l 170 (208)
++++ ++..|-+. +.++.+.++++. +.| -+.|=+-++.+.++++++....+++|+..+..-.- .-..+.
T Consensus 268 ~~i~-----~iEqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia 338 (441)
T 2hxt_A 268 FDIA-----WIEEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLAIL 338 (441)
T ss_dssp GCCS-----CEECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHHHH
T ss_pred cCCC-----eeeCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHHHH
Confidence 5554 44565332 235666667665 223 34444567899999999998899999977764321 123788
Q ss_pred HHHHHhCCcEEE
Q 040616 171 PTCRELGIGIVA 182 (208)
Q Consensus 171 ~~~~~~gi~v~a 182 (208)
..|+++|+.+..
T Consensus 339 ~~A~~~g~~~~~ 350 (441)
T 2hxt_A 339 LLAAKFGVRVFP 350 (441)
T ss_dssp HHHHHTTCEECC
T ss_pred HHHHHcCCeEEE
Confidence 999999999854
No 86
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=75.97 E-value=9.3 Score=28.62 Aligned_cols=65 Identities=9% Similarity=0.115 Sum_probs=43.0
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeC-cccHHHHHHHhhcCCccEEeec
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLS-EASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~ 157 (208)
..++|.||+=+++.-......+.+ ..+.|.+.. ...+..+||- |-+++.+.++.+...++++|+.
T Consensus 17 a~~~GaD~iGfif~~~SpR~V~~~-~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 17 AEALGAFALGFVLAPGSRRRIAPE-AARAIGEAL-GPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp HHHHTCSEEEEECCTTCTTBCCHH-HHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHTTCSEEEEC
T ss_pred HHHcCCCEEEEEecCCCCCcCCHH-HHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 346799999988532112223433 333332222 2458899984 6788999999999999999986
No 87
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=75.82 E-value=27 Score=27.52 Aligned_cols=99 Identities=11% Similarity=0.135 Sum_probs=62.8
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEee-cCCCC-CCHH----HHHHHHHHHHHc-CCcceEeeCcccHHHHHHHhhcCCc
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQH-RIDTK-IPIE----VTIGELKRLVEE-GKIKHIDLSEASASTIRRAHTIHPI 151 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~~-~~~~----~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~ 151 (208)
+++.+.+..++ +-.-|-|.||+-.-- +|... .+.+ .+...++.++++ +. -|.+-+++++.++++++....
T Consensus 36 ~~~~a~~~a~~-~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa~ 112 (282)
T 1aj0_A 36 SLIDAVKHANL-MINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGAH 112 (282)
T ss_dssp HHHHHHHHHHH-HHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCCC
Confidence 34444443332 223478999998643 34321 2222 245555666554 33 577889999999999998665
Q ss_pred cEEeeccCcCCCCccccHHHHHHHhCCcEEEccc
Q 040616 152 TVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 152 ~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
-+|-+.-- . ..++++.++++|.+++.+.-
T Consensus 113 iINdvsg~---~--d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 113 IINDIRSL---S--EPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp EEEETTTT---C--STTHHHHHHHHTCCEEEECC
T ss_pred EEEECCCC---C--CHHHHHHHHHhCCeEEEEcc
Confidence 55544322 2 45899999999999998754
No 88
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=75.62 E-value=9.2 Score=31.44 Aligned_cols=73 Identities=15% Similarity=0.057 Sum_probs=53.3
Q ss_pred HHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHHHhCCcEEEcccCccc
Q 040616 117 IGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 117 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~~~gi~v~a~~pl~~G 189 (208)
++.+.++++.-.+ -+.|=+-++...+.++++...++++|+..+..-. ..-..+...|+++|+.+...+.+.++
T Consensus 233 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 307 (381)
T 3fcp_A 233 NAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGT 307 (381)
T ss_dssp HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccH
Confidence 5667777765444 3445566888999999988889999997765432 12347899999999999987776553
No 89
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=75.58 E-value=13 Score=30.29 Aligned_cols=145 Identities=16% Similarity=0.149 Sum_probs=83.6
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-------EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHc
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-------VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCL 94 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-------~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 94 (208)
+.++..+..+.+.+.|++.|..-- +.....+.+.. +-|.... ++ .++.+. .+-++ .|+.+
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v~avr~a~~~~~l~vDa-----n~----~~~~~~-~~~~~-~l~~~ 214 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPVRATREAFPDIRLTVDA-----NS----AYTLAD-AGRLR-QLDEY 214 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHHHHHHHHCTTSCEEEEC-----TT----CCCGGG-HHHHH-TTGGG
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHHHHHHHHcCCCeEEEeC-----CC----CCCHHH-HHHHH-HHHhC
Confidence 455667777888889999875311 11111222221 1122121 11 344555 33333 25555
Q ss_pred CCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHH
Q 040616 95 DVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPT 172 (208)
Q Consensus 95 ~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~ 172 (208)
+++ ++..|-+. +.++.+.+++++-.| -+.|=+-++.+++.++++....+++|+..+..-.- .-..+...
T Consensus 215 ~i~-----~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~ 285 (375)
T 1r0m_A 215 DLT-----YIEQPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDV 285 (375)
T ss_dssp CCS-----CEECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHH
T ss_pred CCc-----EEECCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHH
Confidence 544 44566432 235566677765444 23334557889999999988899999987765321 12378999
Q ss_pred HHHhCCcEEEcccCcc
Q 040616 173 CRELGIGIVAYSLLGR 188 (208)
Q Consensus 173 ~~~~gi~v~a~~pl~~ 188 (208)
|+++|+.++..+-+.+
T Consensus 286 A~~~g~~~~~~~~~es 301 (375)
T 1r0m_A 286 AQSFGAPVWCGGMLES 301 (375)
T ss_dssp HHHTTCCEEECCCCCC
T ss_pred HHHcCCcEEecCcccc
Confidence 9999999766554443
No 90
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=75.50 E-value=16 Score=29.94 Aligned_cols=149 Identities=13% Similarity=0.065 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHC-CCCeEeCCCCCCC-Cchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDS-GITVLDTSNVYGP-HTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASL 91 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~-g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 91 (208)
+.++..+..+.+++. |++.|-.--.-.+ ....+ .+|. +-|..... ..++.+...+ +-+.|
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan---------~~~~~~~A~~-~~~~l 217 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDIN---------ARWDRRTALH-YLPIL 217 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECT---------TCSCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECC---------CCCCHHHHHH-HHHHH
Confidence 445566666777776 9998753211100 00111 1232 34444432 1345544433 33556
Q ss_pred HHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccH
Q 040616 92 KCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEI 169 (208)
Q Consensus 92 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~ 169 (208)
+.+++++| ..|-+.. -++.+.+++++-.| -+.|=+-++.+++.++++....+++|+..+..-.- .-..+
T Consensus 218 ~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 288 (383)
T 3i4k_A 218 AEAGVELF-----EQPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKI 288 (383)
T ss_dssp HHTTCCEE-----ESCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHH
T ss_pred HhcCCCEE-----ECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHH
Confidence 66665544 4554322 25566667665444 34444568899999999988899999987765321 13378
Q ss_pred HHHHHHhCCcEEEcccCccc
Q 040616 170 VPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 170 l~~~~~~gi~v~a~~pl~~G 189 (208)
...|+++|+.+...+.+.++
T Consensus 289 a~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 289 AAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp HHHHHHTTCEEEECCSCCCH
T ss_pred HHHHHHcCCeEEeCCCCccH
Confidence 89999999999977766543
No 91
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=75.06 E-value=7.3 Score=32.20 Aligned_cols=87 Identities=17% Similarity=0.101 Sum_probs=61.3
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHh
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCREL 176 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~ 176 (208)
.++.++-.|-+..+ ++.+.++.++-.+ -+.|=|-++...+.++++....+++|+..+..-.- .-..+...|+++
T Consensus 227 ~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~ 302 (393)
T 1wuf_A 227 YDLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALN 302 (393)
T ss_dssp GTCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHT
T ss_pred CCCeEEECCCCCcC----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHc
Confidence 56777777754333 5566667665444 34444567889999999888899999988765321 123788999999
Q ss_pred CCcEEEcccCccc
Q 040616 177 GIGIVAYSLLGRG 189 (208)
Q Consensus 177 gi~v~a~~pl~~G 189 (208)
|+.++..+.+.++
T Consensus 303 gi~~~~~~~~es~ 315 (393)
T 1wuf_A 303 EILVWCGGMLEAG 315 (393)
T ss_dssp TCEEEECCCCCCH
T ss_pred CCeEEecCCcccH
Confidence 9999887766543
No 92
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=75.06 E-value=27 Score=27.99 Aligned_cols=104 Identities=15% Similarity=-0.048 Sum_probs=69.3
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEe
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVR 155 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q 155 (208)
.++++...+-++. |+.+. ..++.++-.|-+..+ ++.+.++.+.-.| -+.|=|-++...+.++++....+++|
T Consensus 171 ~~~~~~A~~~~~~-l~~~~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ 243 (332)
T 2ozt_A 171 SWDRATANRWFAW-LDRHG--NGKIEYVEQPLPPDQ----WQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFV 243 (332)
T ss_dssp CCCHHHHHHHHHH-HHHHC--CTTEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHH-HHhhc--cCCcceeECCCCCCC----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEE
Confidence 3455555444433 45442 137888888855433 5556666655333 35555667889999999887788888
Q ss_pred eccCcCCCCccccHHHHHHHh--CCcEEEcccCccc
Q 040616 156 LEWSLRSRDVEEEIVPTCREL--GIGIVAYSLLGRG 189 (208)
Q Consensus 156 ~~~~~~~~~~~~~~l~~~~~~--gi~v~a~~pl~~G 189 (208)
+..+..-. -..+.+.|+++ |+.++..+.+.++
T Consensus 244 ik~~~~GG--i~~i~~~A~~~~~gi~~~~~~~~es~ 277 (332)
T 2ozt_A 244 IKTALFGD--PDSLSLLLRRGLEPQRLVFSSALEGA 277 (332)
T ss_dssp ECHHHHSC--HHHHHHHHHTTCCGGGEEEBCCSCCH
T ss_pred EChhhhCC--HHHHHHHHHHhCCCCcEEEeCCcchH
Confidence 87665533 24789999999 9999988776544
No 93
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=74.91 E-value=6.3 Score=32.69 Aligned_cols=96 Identities=19% Similarity=0.124 Sum_probs=66.6
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-Ccc
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVE 166 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 166 (208)
+.+++|..+.+++.++-.|-+..+ ++.+.++.++-.+ -+.|=|-++...+.++++...++++|+..+. -- ..-
T Consensus 235 ~~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~-GGit~~ 309 (393)
T 3u9i_A 235 RLLDMLGVHGIVPALFEQPVAKDD----EEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK-CGIVEA 309 (393)
T ss_dssp HHHHTTTTTTCCCSEEECCSCTTC----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-HCHHHH
T ss_pred HHHHHHhhCCCCeEEEECCCCCCc----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-cCHHHH
Confidence 344555324467778887754332 4556667665444 4566677899999999998889999998776 22 112
Q ss_pred ccHHHHHHHhCCcEEEcccCccc
Q 040616 167 EEIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 167 ~~~l~~~~~~gi~v~a~~pl~~G 189 (208)
..+...|+++|+.+...+.+.++
T Consensus 310 ~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 310 LDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp HHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHcCCeEEecCCcccH
Confidence 37899999999999988876554
No 94
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=74.69 E-value=8.3 Score=31.14 Aligned_cols=151 Identities=10% Similarity=0.016 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhc------ce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHc
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEILL------AR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCL 94 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~------g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 94 (208)
+.++..+..+.+.+.|++.|-.--.-......+.+ |. +-|..-. + ..++.+...+-++ .|+.+
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v~avr~~g~~~~l~vDa-----n----~~~~~~~a~~~~~-~l~~~ 208 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIVDA-----N----MGYTQKEAVEFAR-AVYQK 208 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHSTTCEEEEEC-----T----TCSCHHHHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHHHHHHhhCCCCeEEEEC-----C----CCCCHHHHHHHHH-HHHhc
Confidence 45667777788889999987631110000011111 22 2222111 1 2345666555443 37776
Q ss_pred CCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccccHHHHH
Q 040616 95 DVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTC 173 (208)
Q Consensus 95 ~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~ 173 (208)
+++ ..++..|-+. +-++.+.+++++-.|- +.|=+-++.+.++++++....+++|+..+-.--..-..+...|
T Consensus 209 ~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~A 281 (345)
T 2zad_A 209 GID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIA 281 (345)
T ss_dssp TCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHHHHHHHHHHHHH
T ss_pred CCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEecccccHHHHHHHHHHH
Confidence 655 1145566432 2366777777765553 3333557889999999988899999966541111123789999
Q ss_pred HHhCCcEEEcccCccc
Q 040616 174 RELGIGIVAYSLLGRG 189 (208)
Q Consensus 174 ~~~gi~v~a~~pl~~G 189 (208)
+++|+.++..+.+.++
T Consensus 282 ~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 282 ESSGLKLMIGCMGESS 297 (345)
T ss_dssp HTTTCEEEECCSSCCH
T ss_pred HHcCCeEEEecCcccH
Confidence 9999999998776443
No 95
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=73.89 E-value=35 Score=27.79 Aligned_cols=144 Identities=9% Similarity=-0.067 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHHHCCCCeEeC--CCCC-CCC-c---hhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDT--SNVY-GPH-T---NEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAA 86 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~Y-g~g-~---~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~ 86 (208)
+.++..+..+.+.+.|++.|.. +..| +.. . ..+. +|. +-|..... ..++.+...+-
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan---------~~~~~~~a~~~ 219 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAF---------HWYSRTDALAL 219 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECC---------TTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECC---------CCCCHHHHHHH
Confidence 5566777788888999998763 3212 100 0 1111 222 34443432 13456655544
Q ss_pred HHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcce-EeeCccc-HHHHHHHhhcCCccEEeeccCcCCC-
Q 040616 87 CEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKH-IDLSEAS-ASTIRRAHTIHPITVVRLEWSLRSR- 163 (208)
Q Consensus 87 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~-~~~l~~~~~~~~~~~~q~~~~~~~~- 163 (208)
+ +.|+.++++ ++..|-+. +.++.+.+++++-.|-= .+=+-++ .+.++++++....+++|+..+..-.
T Consensus 220 ~-~~l~~~~i~-----~iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 289 (382)
T 1rvk_A 220 G-RGLEKLGFD-----WIEEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGI 289 (382)
T ss_dssp H-HHHHTTTCS-----EEECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSH
T ss_pred H-HHHHhcCCC-----EEeCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCH
Confidence 4 356666655 34555432 23667777777655533 3334567 8999999999889999997765422
Q ss_pred CccccHHHHHHHhCCcEEEcc
Q 040616 164 DVEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 164 ~~~~~~l~~~~~~gi~v~a~~ 184 (208)
..-..+...|+++|+.++..+
T Consensus 290 t~~~~i~~~A~~~g~~~~~~~ 310 (382)
T 1rvk_A 290 TPALKTMHLAEAFGMECEVHG 310 (382)
T ss_dssp HHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHcCCeEeecC
Confidence 112478999999999999873
No 96
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=72.79 E-value=6.9 Score=31.93 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=54.1
Q ss_pred HHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHhCCcEEEcccCccc
Q 040616 117 IGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 117 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl~~G 189 (208)
++.+.+++++-.| -+.|=|-++...+.++++...++++|+.....--- .-..+...|+++|+.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 228 TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCH
T ss_pred hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccH
Confidence 5677778777665 35556678889999999888889999876654321 1247889999999999887776554
No 97
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=72.75 E-value=31 Score=28.65 Aligned_cols=144 Identities=11% Similarity=0.069 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCC--Cc-----hhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGP--HT-----NEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAA 86 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~-----~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~ 86 (208)
+.++..+..+.+.+.|++.|..--..+. |. ..+ .+|. +-|..... ..++.+...+-
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN---------~~~~~~~Ai~~ 249 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECY---------MGWNLDYAKRM 249 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECT---------TCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECC---------CCCCHHHHHHH
Confidence 5677788888999999999875322220 00 111 1222 34443432 13455554433
Q ss_pred HHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-C
Q 040616 87 CEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-D 164 (208)
Q Consensus 87 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~ 164 (208)
+ +.|+.++++ ++..|-+.. -++.+.+++++-.|- +.|=+-++...++++++....+++|+..+..-- .
T Consensus 250 ~-~~Le~~~i~-----~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGit 319 (412)
T 3stp_A 250 L-PKLAPYEPR-----WLEEPVIAD----DVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGIT 319 (412)
T ss_dssp H-HHHGGGCCS-----EEECCSCTT----CHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHH
T ss_pred H-HHHHhcCCC-----EEECCCCcc----cHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCHH
Confidence 2 345666544 445664322 366778888775553 444456889999999999889999987765421 1
Q ss_pred ccccHHHHHHHhCCcEEEcc
Q 040616 165 VEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 165 ~~~~~l~~~~~~gi~v~a~~ 184 (208)
.-..+...|+++|+.+...+
T Consensus 320 ~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 320 AAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHHHHHHHcCCEEEecc
Confidence 13478999999999998766
No 98
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=72.51 E-value=10 Score=30.81 Aligned_cols=105 Identities=18% Similarity=0.206 Sum_probs=58.6
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEE-----EeecCCCCCCHHHHHHHHHHHHHc-CCcceEee---CcccHHHHHHHhh
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLY-----YQHRIDTKIPIEVTIGELKRLVEE-GKIKHIDL---SEASASTIRRAHT 147 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~-----~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGv---s~~~~~~l~~~~~ 147 (208)
.++.+...+ +-+.|.++|+++|.+= ..-.|.........|+.+.++++. ..++...+ ..-..+.++++.+
T Consensus 26 ~~~~e~k~~-i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRA-IARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHH-HHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHH-HHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHh
Confidence 445555444 4456677998888883 222222111223456677777654 23455544 2224566777776
Q ss_pred cCCccEEeeccCcCCCCccccHHHHHHHhCCcEEEc
Q 040616 148 IHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 148 ~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~ 183 (208)
. ..+.+.+..++-....-.+.+++|+++|+.++..
T Consensus 105 a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 105 A-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp H-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred C-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 5 3344444332221122458999999999988765
No 99
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=72.31 E-value=40 Score=27.88 Aligned_cols=142 Identities=9% Similarity=0.010 Sum_probs=89.0
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCc------------hhh-------hcce-EEEEeecceecCCCCccCCCChH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHT------------NEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPA 81 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~------------~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~ 81 (208)
+.++..+.++.+++.|++.|-. -|... ..+ .+|. +-|..... ...+.+
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN---------~~~~~~ 192 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFH---------GRVSAP 192 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECC---------SCBCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECC---------CCCCHH
Confidence 5677888889999999999876 22110 011 2222 33333332 134554
Q ss_pred HHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCc
Q 040616 82 YLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSL 160 (208)
Q Consensus 82 ~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~ 160 (208)
...+ +-+.|+.+++++ +..|-+.. .++.+.++++.-.|- +.|=+-++...++++++....+++|+..+.
T Consensus 193 ~A~~-~~~~L~~~~i~~-----iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~ 262 (405)
T 3rr1_A 193 MAKV-LIKELEPYRPLF-----IEEPVLAE----QAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSH 262 (405)
T ss_dssp HHHH-HHHHHGGGCCSC-----EECSSCCS----STHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTT
T ss_pred HHHH-HHHHHHhcCCCE-----EECCCCcc----cHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhh
Confidence 4433 224456665544 45664322 356677787765553 344456789999999999889999998776
Q ss_pred CCC-CccccHHHHHHHhCCcEEEccc
Q 040616 161 RSR-DVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 161 ~~~-~~~~~~l~~~~~~gi~v~a~~p 185 (208)
.-. ..-..+...|+++|+.+...+.
T Consensus 263 ~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 263 AGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp TTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred cCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 532 1134799999999999988765
No 100
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=72.20 E-value=8.1 Score=30.72 Aligned_cols=102 Identities=8% Similarity=-0.023 Sum_probs=61.1
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeec
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 157 (208)
++.+. +..+-+.|.++|+++|.+-....|.......+.++.+..+.+...++..+.. -+.+.++.+++.. ++.+.+.
T Consensus 27 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG-~~~v~i~ 103 (302)
T 2ftp_A 27 IEVAD-KIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESG-VKEVAVF 103 (302)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTT-CCEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCC-cCEEEEE
Confidence 44444 4556667899999999998765543211112334444445444555655555 4777888888763 4555553
Q ss_pred cCcCC--------CC------ccccHHHHHHHhCCcEEE
Q 040616 158 WSLRS--------RD------VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 158 ~~~~~--------~~------~~~~~l~~~~~~gi~v~a 182 (208)
.+.-+ .. .-.+.+++|+++|+.|.+
T Consensus 104 ~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~ 142 (302)
T 2ftp_A 104 AAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRG 142 (302)
T ss_dssp EESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 32211 11 124789999999999864
No 101
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=71.83 E-value=12 Score=30.81 Aligned_cols=147 Identities=11% Similarity=-0.077 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCC-CC-CCchh---hh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNV-YG-PHTNE---IL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACE 88 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~-Yg-~g~~e---~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~ 88 (208)
+.++..+.++.+++.|++.|-.--. +. .+.-+ +. +|. +-|..... ..++++. ..
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN---------~~~~~~~----A~ 211 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADAN---------NGLTVEH----AL 211 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECT---------TCCCHHH----HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECC---------CCCCHHH----HH
Confidence 4566777778888899998753211 00 01111 11 121 33333332 1334433 23
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-cc
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VE 166 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~ 166 (208)
+.+++|. +..++ ++-.|-+ .++.+.+++++-.+ -+.|=|-++...+.++++...++++|+..+..-.- .-
T Consensus 212 ~~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~ 283 (386)
T 3fv9_G 212 RMLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITPM 283 (386)
T ss_dssp HHHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHH
T ss_pred HHHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHHH
Confidence 4556664 34577 7777744 36677777776544 34455668899999999988899999977764321 12
Q ss_pred ccHHHHHHHhCCcEEEcccCccc
Q 040616 167 EEIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 167 ~~~l~~~~~~gi~v~a~~pl~~G 189 (208)
..+...|+++|+.+...+.+.++
T Consensus 284 ~~i~~~A~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 284 LRQRAIAAAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHHcCCEEEeCCCCCCH
Confidence 37899999999999977665544
No 102
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=69.11 E-value=20 Score=29.55 Aligned_cols=146 Identities=11% Similarity=-0.001 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCC-Cch-h------hhcc-e-EEEEeecceecCCCCccCCCChHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGP-HTN-E------ILLA-R-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASL 91 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~-e------~~~g-~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 91 (208)
+.++..+.++.+++.|++.|-.--.-.+ ... + +.+| . +-|..... ..++++. ..+.+
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vDaN---------~~w~~~~----A~~~~ 230 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGN---------RSLPSRD----ALRLS 230 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEECT---------TCCCHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEeCC---------CCCCHHH----HHHHH
Confidence 4566777778888889998753211000 000 0 1223 2 33333322 1334433 23445
Q ss_pred HHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccH
Q 040616 92 KCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEI 169 (208)
Q Consensus 92 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~ 169 (208)
++|. ..++ ++-.|-+ .++.+.++++.-.+ -+.|=+-++...+.++++...++++|+..+..--- .-..+
T Consensus 231 ~~L~--~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~i 301 (391)
T 4e8g_A 231 RECP--EIPF-VLEQPCN------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAF 301 (391)
T ss_dssp HHCT--TSCE-EEESCSS------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred HHHh--hcCe-EEecCCc------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHH
Confidence 5564 3477 7777721 36777777776554 35555678899999999988899999977654321 12378
Q ss_pred HHHHHHhCCcEEEcccCccc
Q 040616 170 VPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 170 l~~~~~~gi~v~a~~pl~~G 189 (208)
...|+++|+.+...+.+.++
T Consensus 302 a~~A~~~gi~~~~~~~~es~ 321 (391)
T 4e8g_A 302 RDICEARALPHSCDDAWGGD 321 (391)
T ss_dssp HHHHHHTTCCEEEECSSCSH
T ss_pred HHHHHHcCCeEEeCCcCCCH
Confidence 99999999999988776554
No 103
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=68.84 E-value=11 Score=30.79 Aligned_cols=146 Identities=13% Similarity=-0.033 Sum_probs=87.5
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+..+.+.+.|++.|..--.-......+. +|. +-|..+.. ..++.+... +.+++
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~~~~l~vDan---------~~~~~~~a~----~~~~~ 212 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDAN---------GKLSVETAL----RLLRL 212 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECCSCHHHHHHHHHHHTTTCCTTCEEEEECT---------TBCCHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHhChheEEeecCCCHHHHHHHHHHHHHhcCCCCEEEEECC---------CCcCHHHHH----HHHHH
Confidence 4566777778888999998763211000001111 222 34433432 123443332 34444
Q ss_pred c-CCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEe-eCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHH
Q 040616 94 L-DVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHID-LSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIV 170 (208)
Q Consensus 94 L-~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l 170 (208)
| . ..++ ++..|-+ .++.+.+++++-.|-=.+ =+-++.+.++++++....+++|+..+..-.- .-..+.
T Consensus 213 l~~--~~~i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 283 (371)
T 2ps2_A 213 LPH--GLDF-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQR 283 (371)
T ss_dssp SCT--TCCC-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHH
T ss_pred HHh--hcCC-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHH
Confidence 4 3 1345 6666643 467777887765554333 2447889999999998899999977754321 123788
Q ss_pred HHHHHhCCcEEEcccCccc
Q 040616 171 PTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 171 ~~~~~~gi~v~a~~pl~~G 189 (208)
..|+++|+.++..+.+.++
T Consensus 284 ~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 284 DICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp HHHHHHTCEEEEECSSCCH
T ss_pred HHHHHcCCeEEecCCCcCH
Confidence 9999999999988776554
No 104
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=68.40 E-value=15 Score=29.89 Aligned_cols=149 Identities=13% Similarity=0.059 Sum_probs=83.0
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce---EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCc
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR---VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDC 98 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~---~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~ 98 (208)
+.++..+..+.+.+.|++.|..-- +.....+.+.. .+=-.++..+. + ..++.+. .+- -+.|+.++++
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v~avr~a~~~~~l~vDa-n----~~~~~~~-~~~-~~~l~~~~i~- 210 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVLKAVREAFPEATLTADA-N----SAYSLAN-LAQ-LKRLDELRLD- 210 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHHHHHHHHCTTSCEEEEC-T----TCCCGGG-HHH-HHGGGGGCCS-
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHHHHHHHHcCCCeEEEec-C----CCCCHHH-HHH-HHHHHhCCCc-
Confidence 456667777888889998775311 11111222222 11000011111 1 1344555 332 2335555544
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHh
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCREL 176 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~ 176 (208)
++..|-+. +-++.+.+++++-.|- +.|=+-++.+.+.++++....+++|+..+..-.- .-..+...|+++
T Consensus 211 ----~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 282 (369)
T 2zc8_A 211 ----YIEQPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESA 282 (369)
T ss_dssp ----CEECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred ----EEECCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHc
Confidence 44566332 2355666676654443 3344557889999999988899999977654221 124789999999
Q ss_pred CCcEEEcccCcc
Q 040616 177 GIGIVAYSLLGR 188 (208)
Q Consensus 177 gi~v~a~~pl~~ 188 (208)
|+.++..+-+.+
T Consensus 283 g~~~~~~~~~es 294 (369)
T 2zc8_A 283 GIPLWMGGMLEA 294 (369)
T ss_dssp TCCEEECCCCCC
T ss_pred CCcEEecCcccc
Confidence 999766554443
No 105
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=68.25 E-value=11 Score=30.92 Aligned_cols=86 Identities=13% Similarity=0.072 Sum_probs=59.1
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHHHhC
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCRELG 177 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~~~g 177 (208)
++.++..|-+.. .++.+.++++.-.+ -+.|=+-++...+.++++...++++|+..+..-. ..-..+...|+++|
T Consensus 221 ~i~~iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g 296 (382)
T 3dgb_A 221 GIDLIEQPISRN----NRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAG 296 (382)
T ss_dssp TCCCEECCBCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHT
T ss_pred CcCeeeCCCCcc----CHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcC
Confidence 344555553322 36667777775444 3455566889999999998889999997765432 11337889999999
Q ss_pred CcEEEcccCccc
Q 040616 178 IGIVAYSLLGRG 189 (208)
Q Consensus 178 i~v~a~~pl~~G 189 (208)
+.++..+.+.++
T Consensus 297 i~~~~~~~~es~ 308 (382)
T 3dgb_A 297 IGLYGGTMLEGG 308 (382)
T ss_dssp CEEEECCSCCCH
T ss_pred CeEeecCCCccH
Confidence 999987776553
No 106
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=67.76 E-value=49 Score=27.04 Aligned_cols=137 Identities=13% Similarity=0.040 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCc---hhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHT---NEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEAS 90 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~s 90 (208)
+.++..+..+.+.+.|++.|..-- |.+. ..+. +|. +-|..... ..++.+...+-++.
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~--g~~~~~~~~e~v~avR~a~G~~~~l~vDan---------~~~~~~~a~~~~~~- 212 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKV--GHRDFDRDLRRLELLKTCVPAGSKVMIDPN---------EAWTSKEALTKLVA- 212 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC--CCSSHHHHHHHHHHHHTTSCTTCEEEEECT---------TCBCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcc--CCCCHHHHHHHHHHHHHhhCCCCeEEEECC---------CCCCHHHHHHHHHH-
Confidence 556677778888999999886421 1111 1122 222 33333332 13456665555544
Q ss_pred HHH--cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcC-Ccce-EeeCcccHHHHHHHhhcCCccEEeeccCcCCCCcc
Q 040616 91 LKC--LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEG-KIKH-IDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVE 166 (208)
Q Consensus 91 L~~--L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~ 166 (208)
|+. +++ .++..|-+. +.++.+.+++++- .|-= .+=+- +.+.++++++....+++|+. .--..-
T Consensus 213 l~~~g~~i-----~~iEqP~~~----~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik---GGit~a 279 (389)
T 2oz8_A 213 IREAGHDL-----LWVEDPILR----HDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH---GQVTDV 279 (389)
T ss_dssp HHHTTCCC-----SEEESCBCT----TCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC---SCHHHH
T ss_pred HHhcCCCc-----eEEeCCCCC----cCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC---cCHHHH
Confidence 676 443 345666332 2367777887764 4533 33345 88999999999889999998 111112
Q ss_pred ccHHHHHHHhCCcEEEc
Q 040616 167 EEIVPTCRELGIGIVAY 183 (208)
Q Consensus 167 ~~~l~~~~~~gi~v~a~ 183 (208)
..+...|+++|+.++..
T Consensus 280 ~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 280 MRIGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHcCCeEeec
Confidence 47899999999999988
No 107
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=67.58 E-value=34 Score=28.30 Aligned_cols=86 Identities=8% Similarity=-0.048 Sum_probs=59.6
Q ss_pred EeecCCCCCCHHHHHHHHHHHHHc-----CCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHH
Q 040616 103 YQHRIDTKIPIEVTIGELKRLVEE-----GKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRE 175 (208)
Q Consensus 103 ~lh~~~~~~~~~~~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~ 175 (208)
++-.|-+.....+-++.+.++.++ -.| =+.|=+-++.+.+.++++....+++|+..+..-.- .-..+..+|++
T Consensus 271 ~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~ 350 (413)
T 1kcz_A 271 RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKA 350 (413)
T ss_dssp EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHH
T ss_pred EEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 666664322245567777777776 333 34444567889999999888899999988765331 12489999999
Q ss_pred hCCcEEEcc-cCcc
Q 040616 176 LGIGIVAYS-LLGR 188 (208)
Q Consensus 176 ~gi~v~a~~-pl~~ 188 (208)
+|+.++..+ .+..
T Consensus 351 ~gi~~~~~~~~~es 364 (413)
T 1kcz_A 351 NGMGAYCGGTCNET 364 (413)
T ss_dssp TTCEEEECCCTTSC
T ss_pred cCCEEEecCCCCCC
Confidence 999999865 4443
No 108
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=67.56 E-value=44 Score=26.55 Aligned_cols=87 Identities=14% Similarity=0.104 Sum_probs=55.3
Q ss_pred HcCCCcccEEEee-cCC-CCCCHHHH----HHHHHHHHHc-CCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCc
Q 040616 93 CLDVDCIDLYYQH-RID-TKIPIEVT----IGELKRLVEE-GKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDV 165 (208)
Q Consensus 93 ~L~~d~iDl~~lh-~~~-~~~~~~~~----~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~ 165 (208)
.-|-|.||+-.-- +|. ...+.++- ...++.++++ +. -|.|-+++++.++++++....-+|- .|-...
T Consensus 74 ~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~iINd--vsg~~~-- 147 (297)
T 1tx2_A 74 DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHIIND--IWGAKA-- 147 (297)
T ss_dssp HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCEEEE--TTTTSS--
T ss_pred HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCEEEE--CCCCCC--
Confidence 4688888887533 232 22333333 3444555554 33 4777889999999999986544433 333333
Q ss_pred cccHHHHHHHhCCcEEEccc
Q 040616 166 EEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 166 ~~~~l~~~~~~gi~v~a~~p 185 (208)
..++++.+++.|.+++.+.-
T Consensus 148 d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 148 EPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp CTHHHHHHHHHTCCEEEECC
T ss_pred CHHHHHHHHHhCCcEEEEeC
Confidence 35889999999999998764
No 109
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=67.24 E-value=18 Score=29.69 Aligned_cols=149 Identities=11% Similarity=0.040 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCC-Cchhhhcce-------EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGP-HTNEILLAR-------VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~e~~~g~-------~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+.++.+++.|++.|-.--.-.. ....+.+.. +-|..... ..++.+...+ +-+.|+.
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~~~~~l~vDan---------~~~~~~~A~~-~~~~L~~ 217 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDFPEFRVRVDYN---------QGLEIDEAVP-RVLDVAQ 217 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHCTTSEEEEECT---------TCCCGGGHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhCCCCeEEEECC---------CCCCHHHHHH-HHHHHHh
Confidence 3455556667777889888753211110 001111211 22222221 1234444332 2345555
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHH
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVP 171 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~ 171 (208)
+++++| ..|-+.. -++.+.+++++-.+ -+.|=+-++...+.++++....+++|+..+..-. ..-..+..
T Consensus 218 ~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~ 288 (385)
T 3i6e_A 218 FQPDFI-----EQPVRAH----HFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVAR 288 (385)
T ss_dssp TCCSCE-----ECCSCTT----CHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred cCCCEE-----ECCCCcc----cHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHH
Confidence 655444 4553322 36777778776444 3445566889999999998889999997765432 11237899
Q ss_pred HHHHhCCcEEEcccCccc
Q 040616 172 TCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 172 ~~~~~gi~v~a~~pl~~G 189 (208)
.|+++|+.+...+.+.++
T Consensus 289 ~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 289 IAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp HHHHTTCEEEECCCSCCH
T ss_pred HHHHcCCEEEeCCCCccH
Confidence 999999999876655544
No 110
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=66.41 E-value=31 Score=28.13 Aligned_cols=144 Identities=10% Similarity=0.006 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHHHC-CCCeEeCCCCCCCC-chhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDS-GITVLDTSNVYGPH-TNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASL 91 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g-~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 91 (208)
+.++..+..+.+++. |++.|-.--.-.+. ...+ .+|. +-|..... ..++.+... +.+
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan---------~~~~~~~a~----~~~ 217 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGN---------GKWDLPTCQ----RFC 217 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECT---------TCCCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCC---------CCCCHHHHH----HHH
Confidence 456677778888888 99987532110000 0111 2222 34443432 134444432 334
Q ss_pred HHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccH
Q 040616 92 KCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEI 169 (208)
Q Consensus 92 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 169 (208)
+.| +..++.++..|-+.. .++.+.+++++-.+ -+.|=+-++.+.+.++++...++++|+..+-.-. ..-..+
T Consensus 218 ~~l--~~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 291 (372)
T 3tj4_A 218 AAA--KDLDIYWFEEPLWYD----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQV 291 (372)
T ss_dssp HHT--TTSCEEEEESCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHH
T ss_pred HHH--hhcCCCEEECCCCch----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHH
Confidence 444 335777888775432 36667777776444 3445566889999999999889999998776432 113379
Q ss_pred HHHHHHhCCcEEEcc
Q 040616 170 VPTCRELGIGIVAYS 184 (208)
Q Consensus 170 l~~~~~~gi~v~a~~ 184 (208)
...|+++|+.+...+
T Consensus 292 a~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 292 ADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHTTCCBCCCC
T ss_pred HHHHHHcCCEEEecC
Confidence 999999999988765
No 111
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=66.26 E-value=57 Score=27.34 Aligned_cols=96 Identities=8% Similarity=-0.027 Sum_probs=67.1
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCc--ccHHHHHHHhhcCCccEEe
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSE--ASASTIRRAHTIHPITVVR 155 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~q 155 (208)
.+++...+.+.+.++.+ +++++-.|-+.. -|+.+.+|.++..|-=.|=-. .+++.+.++++....+++|
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~d----D~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 343 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAED----DWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALL 343 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT----CHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCc----CHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEE
Confidence 35565555556666654 578888885433 377777788777665544333 3789999999998899999
Q ss_pred eccCcCCCC-ccccHHHHHHHhCCcEEE
Q 040616 156 LEWSLRSRD-VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 156 ~~~~~~~~~-~~~~~l~~~~~~gi~v~a 182 (208)
+..|-.-.- .-..+...|+++|+.++.
T Consensus 344 ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 344 LKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 977754321 123789999999998765
No 112
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=66.22 E-value=14 Score=29.71 Aligned_cols=83 Identities=18% Similarity=0.147 Sum_probs=48.2
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhC
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELG 177 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~g 177 (208)
.++.++-.|-+ + ++.+.++.++-.+ -+.|=|-++...+.++++...++++|+..+..-. -.+.++.|+..|
T Consensus 150 ~~l~~iEqP~~--~----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik~~~~GG--it~~~~ia~~~g 221 (327)
T 2opj_A 150 FELEYVEQPCA--T----VDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLGG--VRAALRLAEECG 221 (327)
T ss_dssp GCEEEEECCSS--S----HHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEECHHHHTS--HHHHHHHHHHTC
T ss_pred cCCcEEeCCCC--C----HHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCC--HHHHHHHHHHcC
Confidence 56777777643 1 4566666654333 3444455666667777777778888887665433 346678889999
Q ss_pred CcEEEcccCccc
Q 040616 178 IGIVAYSLLGRG 189 (208)
Q Consensus 178 i~v~a~~pl~~G 189 (208)
+.++..+.+.++
T Consensus 222 i~~~~~~~~es~ 233 (327)
T 2opj_A 222 LPVVVSSAVETS 233 (327)
T ss_dssp SCEEEBCCSCCH
T ss_pred CcEEEcCCCcCH
Confidence 999988877554
No 113
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=65.81 E-value=24 Score=26.14 Aligned_cols=156 Identities=8% Similarity=-0.017 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcceEEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCC---c
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLARVKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVD---C 98 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d---~ 98 (208)
+++.+.++++.+++.|+...+.-...= -..-..+|+.|=..++.... .....+.+++.++.....+..+ .
T Consensus 15 d~~~~~~~~~~al~~g~~~~~i~~~~l-~p~m~~vG~~w~~g~~~~~~------~~~~~~~~~~~l~~l~~~~~~~~~~~ 87 (210)
T 1y80_A 15 DEAQVVELTRSLLSGGAEPLEVINKGL-IAGMDRVGVLFKNNEMFVPE------VLMSANAMNAGVEVVKQSQQAFDMPS 87 (210)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHcCCceeHHH------HHHHHHHHHHHHHHHHHHhccccCCC
Confidence 566788999999998876555332110 01223444433333322211 1122333344443322233211 1
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCC-cceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHh
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGK-IKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCREL 176 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~ 176 (208)
---+++..+..+..--...=.-.-|...|. +.++|. +.+++.+.++....+++++-+........ .-..+++.+++.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~-~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~ 166 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV-DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAA 166 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS-SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhc
Confidence 223555555433322222223345556774 567886 55778888887777778877766543322 223688888887
Q ss_pred C----CcEEEccc
Q 040616 177 G----IGIVAYSL 185 (208)
Q Consensus 177 g----i~v~a~~p 185 (208)
+ +.++.-++
T Consensus 167 ~~~~~~~v~vGG~ 179 (210)
T 1y80_A 167 GLRDRVKVIVGGA 179 (210)
T ss_dssp TCGGGCEEEEEST
T ss_pred CCCCCCeEEEECC
Confidence 6 55655433
No 114
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=65.73 E-value=59 Score=27.23 Aligned_cols=143 Identities=7% Similarity=0.009 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKC 93 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 93 (208)
+.++..+..+.+++.|++.|-.--.-......+ .+|. +-|..-.. ..++++... +.+++
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v~avR~a~G~~~~l~vDaN---------~~~~~~~A~----~~~~~ 267 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDAN---------QRWDVPEAV----EWMSK 267 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHHCTTSEEEEECT---------TCCCHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECC---------CCCCHHHHH----HHHHh
Confidence 567778888888999999885321111000111 1222 33333332 134444332 22333
Q ss_pred cCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc----CCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-Ccccc
Q 040616 94 LDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE----GKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEE 168 (208)
Q Consensus 94 L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~----G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 168 (208)
| +..++.++-.|-+..+ ++.+.++++. +.=-+.|=+-++...+.++++...++++|+..+-.-. ..-..
T Consensus 268 L--~~~~~~~iEeP~~~~d----~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~~k 341 (441)
T 4a35_A 268 L--AKFKPLWIEEPTSPDD----ILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 341 (441)
T ss_dssp H--GGGCCSEEECCSCTTC----HHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHHHH
T ss_pred h--cccCccEEeCCCCccc----HHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHHHHH
Confidence 3 2356777787754333 4455555553 3334566677899999999998889999997776532 11337
Q ss_pred HHHHHHHhCCcEEEc
Q 040616 169 IVPTCRELGIGIVAY 183 (208)
Q Consensus 169 ~l~~~~~~gi~v~a~ 183 (208)
+...|+++|+.+..+
T Consensus 342 ia~lA~~~gv~v~~H 356 (441)
T 4a35_A 342 VLLMAKKFEIPVCPH 356 (441)
T ss_dssp HHHHHHHTTCCBCCC
T ss_pred HHHHHHHcCCEEEEe
Confidence 899999999998654
No 115
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=65.01 E-value=17 Score=29.68 Aligned_cols=81 Identities=9% Similarity=-0.007 Sum_probs=56.8
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHh
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCREL 176 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~ 176 (208)
.++.++-.|-+..+ ++.+.++++.-.+ -+.|=|-++...+.++++...++++|+...-.--- .-..+...|+++
T Consensus 214 ~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~ 289 (378)
T 4hpn_A 214 FGIDWFEEPVVPEQ----LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLH 289 (378)
T ss_dssp GCCSCEECCSCTTC----HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHH
T ss_pred cccchhhcCCCccc----hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHc
Confidence 45556666643332 5677777776555 45566778899999999988899999877654321 124789999999
Q ss_pred CCcEEEc
Q 040616 177 GIGIVAY 183 (208)
Q Consensus 177 gi~v~a~ 183 (208)
|+.++..
T Consensus 290 gi~v~~h 296 (378)
T 4hpn_A 290 GVRIVPH 296 (378)
T ss_dssp TCEECCB
T ss_pred CCeEEeC
Confidence 9997643
No 116
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=64.86 E-value=38 Score=28.02 Aligned_cols=82 Identities=9% Similarity=0.008 Sum_probs=56.8
Q ss_pred cEEEeecC-CCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHHHh
Q 040616 100 DLYYQHRI-DTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCREL 176 (208)
Q Consensus 100 Dl~~lh~~-~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~~~ 176 (208)
++.++..| -+..+ ++.+.+++++-.| -+.|=+-++.++++++++....+++|+..+..-- ..-..+...|+++
T Consensus 240 ~i~~iEqP~~~~~~----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~ 315 (410)
T 3dip_A 240 GVLWVEDPIAKMDN----IPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETH 315 (410)
T ss_dssp TCSEEECCBSCTTC----HHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCCccc----HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHc
Confidence 34455566 33322 4556666665444 3445566889999999999899999998877533 1133789999999
Q ss_pred CCcEEEccc
Q 040616 177 GIGIVAYSL 185 (208)
Q Consensus 177 gi~v~a~~p 185 (208)
|+.+...++
T Consensus 316 gi~~~~h~~ 324 (410)
T 3dip_A 316 ARPLAPHXT 324 (410)
T ss_dssp TCCEEECSS
T ss_pred CCEEeeeCc
Confidence 999987665
No 117
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=63.99 E-value=47 Score=26.76 Aligned_cols=98 Identities=11% Similarity=0.105 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHcCCCcccEEEe-ecCC-CCCCHHHHHHHHHHHHHcCCcceEeeC-----cccHHHHHHHhhcC---Ccc
Q 040616 83 LRAACEASLKCLDVDCIDLYYQ-HRID-TKIPIEVTIGELKRLVEEGKIKHIDLS-----EASASTIRRAHTIH---PIT 152 (208)
Q Consensus 83 i~~~~~~sL~~L~~d~iDl~~l-h~~~-~~~~~~~~~~~l~~l~~~G~ir~iGvs-----~~~~~~l~~~~~~~---~~~ 152 (208)
+.+..++..+..|.|.||+-.- -+|+ ...+.++..+.++.+++.-. --|-|- +++++.++++++.. .+.
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~-vPlsIDg~~~~T~~~eV~eaAleagag~~~l 160 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVG-VPLVVVGCGDVEKDHEVLEAVAEAAAGENLL 160 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCC-SCEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCC-ceEEEECCCCCCCCHHHHHHHHHhcCCCCCe
Confidence 3333334447779999998644 3443 23456666667777776422 235555 67888899998874 245
Q ss_pred EEeeccCcCCCCccccHHHHHHHhCCcEEEcccC
Q 040616 153 VVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 153 ~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl 186 (208)
++-+... + ...+++.++++|.+++++.|.
T Consensus 161 INsv~~~---~--~~~m~~laa~~g~~vVlmh~~ 189 (323)
T 4djd_D 161 LGNAEQE---N--YKSLTAACMVHKHNIIARSPL 189 (323)
T ss_dssp EEEEBTT---B--CHHHHHHHHHHTCEEEEECSS
T ss_pred EEECCcc---c--HHHHHHHHHHhCCeEEEEccc
Confidence 5544332 2 247999999999999999874
No 118
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=63.57 E-value=19 Score=29.47 Aligned_cols=149 Identities=9% Similarity=0.037 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCC-Cchhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGP-HTNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLK 92 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 92 (208)
+.++..+.++.+++.|++.|-.--.-.. ....+ .+|. +-|...... .++.+...+ +-+.|+
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~---------~~~~~~A~~-~~~~l~ 215 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQ---------ALTPFGAMK-ILRDVD 215 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTT---------CCCTTTHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCC---------CcCHHHHHH-HHHHHh
Confidence 4455556667777889887753211100 00111 2222 333333321 223333222 334555
Q ss_pred HcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHH
Q 040616 93 CLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIV 170 (208)
Q Consensus 93 ~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l 170 (208)
.+++++| ..|-+.. -++.+.+++++-.+ -+.|=+-++..++.++++....+++|+..+..-. ..-..+.
T Consensus 216 ~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~ 286 (377)
T 3my9_A 216 AFRPTFI-----EQPVPRR----HLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLM 286 (377)
T ss_dssp TTCCSCE-----ECCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHH
T ss_pred hcCCCEE-----ECCCCcc----CHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHH
Confidence 5655444 4553322 36677777776444 3444466889999999998889999987765432 1123789
Q ss_pred HHHHHhCCcEEEcccCccc
Q 040616 171 PTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 171 ~~~~~~gi~v~a~~pl~~G 189 (208)
..|+++|+.+...+.+.++
T Consensus 287 ~~a~~~gi~~~~~~~~es~ 305 (377)
T 3my9_A 287 AIADTAGLPGYGGTLWEGG 305 (377)
T ss_dssp HHHHHHTCCEECCEECCSH
T ss_pred HHHHHcCCeEecCCCCCcH
Confidence 9999999999766555443
No 119
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=63.22 E-value=10 Score=31.20 Aligned_cols=87 Identities=14% Similarity=0.034 Sum_probs=60.2
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHh
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCREL 176 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~ 176 (208)
.++.++-.|-+..+ ++.+.++.++-.+ -+.|=|-++...+.++++...++++|+..+..-.- .-..+...|+++
T Consensus 227 ~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~ 302 (386)
T 1wue_A 227 YQLAMIEQPFAADD----FLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQEN 302 (386)
T ss_dssp SCCSCEECCSCTTC----SHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred CCCeEEeCCCCccc----HHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHC
Confidence 46667777754333 4566666665444 34444567889999999888899999977754321 124789999999
Q ss_pred CCcEEEcccCccc
Q 040616 177 GIGIVAYSLLGRG 189 (208)
Q Consensus 177 gi~v~a~~pl~~G 189 (208)
|+.++..+.+.++
T Consensus 303 gi~~~~~~~~es~ 315 (386)
T 1wue_A 303 DLLVWLGGMFESG 315 (386)
T ss_dssp TCEEEECCCCCCH
T ss_pred CCeEEECCCcccH
Confidence 9999887766543
No 120
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=62.40 E-value=22 Score=27.60 Aligned_cols=150 Identities=11% Similarity=-0.059 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCC----chhhhcce------------EEEEeecceecCCCCccCCCChHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPH----TNEILLAR------------VKLTTKFGIRYEDGKYSYCGDPAYLRA 85 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g----~~e~~~g~------------~~i~tK~~~~~~~~~~~~~~~~~~i~~ 85 (208)
+.+++.++++.|.+.|++.+=.++++..+ ..+..... .=|....|... ...++...
T Consensus 18 ~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~Ev-------~~~~~~~~- 89 (262)
T 3qy7_A 18 DSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQEI-------RIYGEVEQ- 89 (262)
T ss_dssp SHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCEE-------ECCTTHHH-
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeEE-------ecchhHHH-
Confidence 56778899999999999999888887422 11222111 11122222211 22222222
Q ss_pred HHHH-HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCc------ccHHHHHHHhhcCCccEEeecc
Q 040616 86 ACEA-SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSE------ASASTIRRAHTIHPITVVRLEW 158 (208)
Q Consensus 86 ~~~~-sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~------~~~~~l~~~~~~~~~~~~q~~~ 158 (208)
.+++ .+-.| +--|.+++..|... ....+.+.+..+.+.|.+--|+=-. ...+.+.++.+.+ ..+|++.
T Consensus 90 ~l~~~~~~~l--~~~~~vl~e~~~~~-~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G--~~iEiN~ 164 (262)
T 3qy7_A 90 DLAKRQLLSL--NDTKYILIEFPFDH-VPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKG--AASQITS 164 (262)
T ss_dssp HHHTTCSCCG--GGSSEEEEECCTTC-CCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTT--CEEEEEH
T ss_pred HHhcCCCcEE--CCceEEEEeCCCcc-CHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCC--CEEEEEC
Confidence 2222 12222 12245666655332 2355777888888999887776322 1234566666555 3567776
Q ss_pred CcCCCC---ccccHHHHHHHhCCcEEEcc
Q 040616 159 SLRSRD---VEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 159 ~~~~~~---~~~~~l~~~~~~gi~v~a~~ 184 (208)
+.+... ........+.++|+.++.-|
T Consensus 165 ~s~~g~~g~~~~~~~~~~~~~gl~~~igS 193 (262)
T 3qy7_A 165 GSLAGIFGKQLKAFSLRLVEANLIHFVAS 193 (262)
T ss_dssp HHHHTTTCHHHHHHHHHHHHTTCCCEEEC
T ss_pred CccCcccchHHHHHHHHHHhCCCeEEEEc
Confidence 655321 12356777778888766533
No 121
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=62.15 E-value=25 Score=28.99 Aligned_cols=82 Identities=9% Similarity=0.084 Sum_probs=57.1
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHHHhC
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCRELG 177 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~~~g 177 (208)
++.++..|-+.. .++.+.++++.-.|- +.|=+-++.+.++++++....+++|+..+..-. ..-..+...|+++|
T Consensus 233 ~i~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~g 308 (394)
T 3mkc_A 233 ELYFAEATLQHD----DLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANN 308 (394)
T ss_dssp CCSEEESCSCTT----CHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTT
T ss_pred CCeEEECCCCch----hHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcC
Confidence 344556664432 256677777765553 344456788999999998889999998776532 11337899999999
Q ss_pred CcEEEccc
Q 040616 178 IGIVAYSL 185 (208)
Q Consensus 178 i~v~a~~p 185 (208)
+.+...+.
T Consensus 309 i~~~~h~~ 316 (394)
T 3mkc_A 309 VQVMPHNW 316 (394)
T ss_dssp CEECCCCC
T ss_pred CEEeecCC
Confidence 99987764
No 122
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=61.73 E-value=19 Score=29.37 Aligned_cols=143 Identities=13% Similarity=0.031 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCc---hhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHT---NEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEAS 90 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~s 90 (208)
+.++..+..+.+.+.|++.|..-- |.+. ..+. +|. +-|..+.. ..++.+ ...+.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~g~~~~l~vDan---------~~~~~~----~a~~~ 209 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKI--GGSDPAQDIARIEAISAGLPDGHRVTFDVN---------RAWTPA----IAVEV 209 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--CSSCHHHHHHHHHHHHHSCCTTCEEEEECT---------TCCCHH----HHHHH
T ss_pred CHHHHHHHHHHHHHHhhhheeecC--CCCChHHHHHHHHHHHHHhCCCCEEEEeCC---------CCCCHH----HHHHH
Confidence 456677777888889999887421 2111 1122 221 34444432 123433 23344
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEe-eCcccHHHHHHHhhcCCccEEeeccCcCCC-Ccccc
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHID-LSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEE 168 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 168 (208)
+++|. .++ ++..|-+ .|+.+.+++++-.|-=++ =+-++.+.++++++....+++|+..+..-. ..-..
T Consensus 210 ~~~l~---~~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 279 (378)
T 2qdd_A 210 LNSVR---ARD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQ 279 (378)
T ss_dssp HTSCC---CCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHhC---CCc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHH
Confidence 55563 566 7776643 577788888765553333 244688999999998889999997776432 11247
Q ss_pred HHHHHHHhCCcEEEcccCccc
Q 040616 169 IVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 169 ~l~~~~~~gi~v~a~~pl~~G 189 (208)
+...|+++|+.++..+-+.++
T Consensus 280 i~~~A~~~g~~~~~~~~~es~ 300 (378)
T 2qdd_A 280 IRDFGVSVGWQMHIEDVGGTA 300 (378)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCCCcH
Confidence 899999999999988655443
No 123
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=61.61 E-value=13 Score=30.77 Aligned_cols=88 Identities=13% Similarity=0.066 Sum_probs=62.2
Q ss_pred cccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHH
Q 040616 98 CIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRE 175 (208)
Q Consensus 98 ~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~ 175 (208)
..++.++-.|-+..+ ++.+.++.+.-.+ -+.|=|-++...+.++++...++++|+..+..-.- .-..+...|++
T Consensus 214 ~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~ 289 (388)
T 3qld_A 214 AYDLQFIEQPLPEDD----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGE 289 (388)
T ss_dssp GGCCSCEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHH
T ss_pred hCCCcEEECCCCccc----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHH
Confidence 356677777754433 5566667665444 45566778899999999988899999987664321 13479999999
Q ss_pred hCCcEEEcccCccc
Q 040616 176 LGIGIVAYSLLGRG 189 (208)
Q Consensus 176 ~gi~v~a~~pl~~G 189 (208)
+|+.+...+.+.++
T Consensus 290 ~gi~~~~~~~~es~ 303 (388)
T 3qld_A 290 AGMAAWVGGMYETG 303 (388)
T ss_dssp TTCEEEECCCCCCH
T ss_pred CCCeEEecCccchH
Confidence 99999877765443
No 124
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=61.15 E-value=31 Score=27.39 Aligned_cols=86 Identities=14% Similarity=0.151 Sum_probs=58.2
Q ss_pred HcCCCcccEEEee-cCC-----CCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCcc
Q 040616 93 CLDVDCIDLYYQH-RID-----TKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVE 166 (208)
Q Consensus 93 ~L~~d~iDl~~lh-~~~-----~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~ 166 (208)
.-|-|.||+=.-- +|. ....++.+...++.+++++. -|.|-+++++.++++++....-+|= .|-. . .
T Consensus 63 ~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~iINd--Vsg~-~--d 135 (294)
T 2dqw_A 63 AEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAHLLND--VTGL-R--D 135 (294)
T ss_dssp HHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCSEEEC--SSCS-C--C
T ss_pred HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCCEEEE--CCCC-C--C
Confidence 3478999987633 232 23335556777777776633 4778899999999999986543332 3333 2 4
Q ss_pred ccHHHHHHHhCCcEEEccc
Q 040616 167 EEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 167 ~~~l~~~~~~gi~v~a~~p 185 (208)
.++++.+++.|.+++.+.-
T Consensus 136 ~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 136 ERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp HHHHHHHHHHTCEEEEECC
T ss_pred hHHHHHHHHhCCCEEEEcC
Confidence 5899999999999999764
No 125
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=60.60 E-value=43 Score=27.54 Aligned_cols=145 Identities=14% Similarity=0.074 Sum_probs=80.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce------------EEEEeecceecCCCCccCCCChHHHH
Q 040616 17 YGPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR------------VKLTTKFGIRYEDGKYSYCGDPAYLR 84 (208)
Q Consensus 17 ~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~------------~~i~tK~~~~~~~~~~~~~~~~~~i~ 84 (208)
|......++..+.++.|-+.|++.+-|+=+--.+..+..+.+ +-+..=+. |
T Consensus 10 Y~~~~~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIs-------------p---- 72 (372)
T 2p0o_A 10 FLGEEITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDIS-------------G---- 72 (372)
T ss_dssp CTTSCCCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEEC-------------H----
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECC-------------H----
Confidence 333334556679999999999999988877543333333222 33332222 2
Q ss_pred HHHHHHHHHcCCCcccEEEeecC-------CCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCC-ccEEee
Q 040616 85 AACEASLKCLDVDCIDLYYQHRI-------DTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHP-ITVVRL 156 (208)
Q Consensus 85 ~~~~~sL~~L~~d~iDl~~lh~~-------~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~q~ 156 (208)
.+|+.||.+|=|+-.+|.. |...+.++. ..|-+. .-=.+=.|+.+.+.+..+++..+ ++-+..
T Consensus 73 ----~~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~~~ei----a~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a 143 (372)
T 2p0o_A 73 ----EALKRAGFSFDELEPLIELGVTGLRMDYGITIEQM----AHASHK-IDIGLNASTITLEEVAELKAHQADFSRLEA 143 (372)
T ss_dssp ----HHHHTTTCBTTBCHHHHHHTCCEEEECSSCCHHHH----HHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEE
T ss_pred ----HHHHHcCCCHHHHHHHHHcCCCEEEEcCCCCHHHH----HHHhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEE
Confidence 4566677766666555543 222333322 223333 33344557888899999988743 444444
Q ss_pred ccCcCCCC-------ccccHHHHHHHhCCcEEEcccCc
Q 040616 157 EWSLRSRD-------VEEEIVPTCRELGIGIVAYSLLG 187 (208)
Q Consensus 157 ~~~~~~~~-------~~~~~l~~~~~~gi~v~a~~pl~ 187 (208)
-.|.+=+. .-..-=++.++.|+.+.|+-|=-
T Consensus 144 ~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~ 181 (372)
T 2p0o_A 144 WHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGD 181 (372)
T ss_dssp ECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 44433332 11133456778899999877654
No 126
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=60.22 E-value=22 Score=30.47 Aligned_cols=62 Identities=13% Similarity=0.061 Sum_probs=48.2
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-CCccE--Eeecc
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI-HPITV--VRLEW 158 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~--~q~~~ 158 (208)
.-+|+.+.|+|.+ ..++++.++.+++.+++|+..+||+-.--.+.++++.+. ..||+ -|...
T Consensus 203 i~~R~~~gyld~~-------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSa 267 (557)
T 1uwk_A 203 IDFRLETRYVDEQ-------ATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTDQTSA 267 (557)
T ss_dssp HHHHHHTTSCCEE-------CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEECCCSCT
T ss_pred HHHHHhCCCceeE-------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccc
Confidence 3467788999986 246899999999999999999999988677888888876 34444 35433
No 127
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=60.18 E-value=16 Score=29.14 Aligned_cols=102 Identities=10% Similarity=0.002 Sum_probs=59.9
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeec
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 157 (208)
++.+. +..+-+.|.++|+++|.+-....|.......+.++.+..+.+...++..++.. +...++.+++.. .+.+.+.
T Consensus 25 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~~-~~~~i~~a~~~g-~~~v~i~ 101 (307)
T 1ydo_A 25 IATED-KITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALVP-NQRGLENALEGG-INEACVF 101 (307)
T ss_dssp CCHHH-HHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEECC-SHHHHHHHHHHT-CSEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEeC-CHHhHHHHHhCC-cCEEEEE
Confidence 44444 55566778999999999987665532111223344444444445566666663 667788887753 3344433
Q ss_pred cCcCC--------CC------ccccHHHHHHHhCCcEEE
Q 040616 158 WSLRS--------RD------VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 158 ~~~~~--------~~------~~~~~l~~~~~~gi~v~a 182 (208)
.+.-+ .. .-.+.+++++++|+.+.+
T Consensus 102 ~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~ 140 (307)
T 1ydo_A 102 MSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRA 140 (307)
T ss_dssp EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 22211 11 113679999999999864
No 128
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=59.35 E-value=72 Score=26.05 Aligned_cols=143 Identities=10% Similarity=-0.007 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCC-Cchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGP-HTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLK 92 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 92 (208)
+.++..+..+.+.+.|++.|..--.-++ ....+. +|. +-|..... ..++.+...+-++. |+
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan---------~~~~~~~a~~~~~~-l~ 234 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDAN---------GRFNLETGIAYAKM-LR 234 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECT---------TCCCHHHHHHHHHH-HT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECC---------CCCCHHHHHHHHHH-HH
Confidence 4566777788888999998863211110 011122 232 33443332 13455555444433 55
Q ss_pred HcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceE-eeCcccHHHHHHHhhcC----CccEEeeccCcCCCC-cc
Q 040616 93 CLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHI-DLSEASASTIRRAHTIH----PITVVRLEWSLRSRD-VE 166 (208)
Q Consensus 93 ~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~-~~ 166 (208)
.++++ ++..|-+. +.++.+.+++++-.|-=. +=+-++.+.++++++.. ..+++|+..+..-.- .-
T Consensus 235 ~~~i~-----~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~ 305 (392)
T 1tzz_A 235 DYPLF-----WYEEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEY 305 (392)
T ss_dssp TSCCS-----EEECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHH
T ss_pred HcCCC-----eecCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHHHH
Confidence 55544 44565332 346777777776555322 33447889999999988 889999877754321 12
Q ss_pred ccHHHHHHHhCCc---EEEc
Q 040616 167 EEIVPTCRELGIG---IVAY 183 (208)
Q Consensus 167 ~~~l~~~~~~gi~---v~a~ 183 (208)
..+...|+++|+. ++..
T Consensus 306 ~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 306 QRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHHHHHCCCCCceEeec
Confidence 3789999999999 7766
No 129
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=59.25 E-value=78 Score=26.42 Aligned_cols=96 Identities=10% Similarity=-0.002 Sum_probs=64.1
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcC--CcceEeeC--cccHHHHHHHhhcCCccEE
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEG--KIKHIDLS--EASASTIRRAHTIHPITVV 154 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G--~ir~iGvs--~~~~~~l~~~~~~~~~~~~ 154 (208)
+...+.+.+.+.++.+ +++++-.|-+..+ |+.+.+|.++- .|--+|=- .++.+.+.++++..-.+++
T Consensus 273 ~a~~~~~~~~~~l~~y-----~i~~iEdPl~~~D----~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i 343 (432)
T 2ptz_A 273 TAEQLRETYCKWAHDY-----PIVSIEDPYDQDD----FAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSL 343 (432)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHHhC-----CceEEECCCCcch----HHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEE
Confidence 3444444444555543 6889998855443 56666666653 55444432 2688999999998889999
Q ss_pred eeccCcCCCC-ccccHHHHHHHhCCcEEEc
Q 040616 155 RLEWSLRSRD-VEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 155 q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~ 183 (208)
|+..+-.-.- .-..+...|+++|+.++..
T Consensus 344 ~ik~~~~GGitea~~i~~lA~~~g~~v~~~ 373 (432)
T 2ptz_A 344 LLKINQIGTISEAIASSKLCMENGWSVMVS 373 (432)
T ss_dssp EECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 9987754321 1237999999999999753
No 130
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=59.22 E-value=26 Score=28.84 Aligned_cols=82 Identities=11% Similarity=0.059 Sum_probs=56.8
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHhC
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRELG 177 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~g 177 (208)
++.++..|-+.. .++.+.++++.-.|- +.|=+-++.+.++++++....+++|+..+..-.- .-..+...|+++|
T Consensus 228 ~i~~iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~g 303 (394)
T 3mqt_A 228 DLYFIEACLQHD----DLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHN 303 (394)
T ss_dssp CCSEEESCSCTT----CHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHT
T ss_pred CCeEEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcC
Confidence 344556664432 256677777765553 3344557888999999888889999987765321 1337899999999
Q ss_pred CcEEEccc
Q 040616 178 IGIVAYSL 185 (208)
Q Consensus 178 i~v~a~~p 185 (208)
+.+...+.
T Consensus 304 i~~~~h~~ 311 (394)
T 3mqt_A 304 AQLMPHNW 311 (394)
T ss_dssp CEECCCCC
T ss_pred CEEeccCC
Confidence 99987764
No 131
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=58.86 E-value=48 Score=25.66 Aligned_cols=98 Identities=12% Similarity=0.029 Sum_probs=61.3
Q ss_pred HHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHH-HcCCcceEeeC-------cccHHHHHHHhhcCCccEEe
Q 040616 84 RAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLV-EEGKIKHIDLS-------EASASTIRRAHTIHPITVVR 155 (208)
Q Consensus 84 ~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~-~~G~ir~iGvs-------~~~~~~l~~~~~~~~~~~~q 155 (208)
.+.+++.|+..+ +|||.+=+-|-......+++++...++. +-|.--+.|=+ .-..++..+..+...|++++
T Consensus 25 ~~~~~d~Le~~g-~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iE 103 (251)
T 1qwg_A 25 PKFVEDYLKVCG-DYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVE 103 (251)
T ss_dssp HHHHHHHHHHHG-GGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhh-hhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEE
Confidence 456678888888 8999999998755554566666555554 45554455532 11223333333335678888
Q ss_pred eccCcCCCCccc--cHHHHHHHhCCcEEE
Q 040616 156 LEWSLRSRDVEE--EIVPTCRELGIGIVA 182 (208)
Q Consensus 156 ~~~~~~~~~~~~--~~l~~~~~~gi~v~a 182 (208)
+.-.-..-..+. .+++.++++|..++.
T Consensus 104 iS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 104 ISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 766655554222 688899999888864
No 132
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=58.65 E-value=9.3 Score=22.48 Aligned_cols=20 Identities=20% Similarity=0.278 Sum_probs=17.9
Q ss_pred CCHHHHHHHHHHHHHcCCcc
Q 040616 111 IPIEVTIGELKRLVEEGKIK 130 (208)
Q Consensus 111 ~~~~~~~~~l~~l~~~G~ir 130 (208)
.+-++++++|..|.++|+|+
T Consensus 37 V~kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 37 VEKQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp CCHHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHHHHHHCCCee
Confidence 45688999999999999997
No 133
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=58.60 E-value=22 Score=30.44 Aligned_cols=62 Identities=16% Similarity=0.015 Sum_probs=48.5
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-CCccE--Eeecc
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI-HPITV--VRLEW 158 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~--~q~~~ 158 (208)
.-+|+.+.|+|.+. .++++.++.+++.+++|+..+||+-.--.+.++++.+. ..|++ -|...
T Consensus 199 i~~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSa 263 (552)
T 2fkn_A 199 IDKRIETKYCDRKT-------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVTDQTSA 263 (552)
T ss_dssp HHHHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEECCCSCT
T ss_pred HHHHHhCCcceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccc
Confidence 34678889999862 45899999999999999999999988777888888887 34444 35433
No 134
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=58.48 E-value=22 Score=30.43 Aligned_cols=62 Identities=18% Similarity=0.138 Sum_probs=48.4
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc-CCccE--Eeecc
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI-HPITV--VRLEW 158 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~--~q~~~ 158 (208)
.-+|+.+.|+|.+. .++++.++.+++.+++|+..+||+-.--.+.++++.+. ..||+ -|...
T Consensus 198 i~~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSa 262 (551)
T 1x87_A 198 IQRRIDTNYLDTMT-------DSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSA 262 (551)
T ss_dssp HHHHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCT
T ss_pred HHHHHhCCCceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccc
Confidence 34677889999862 45899999999999999999999988677888888887 34444 35433
No 135
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=58.35 E-value=44 Score=25.47 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHc-CCc-ceEeeCcccHHHHHHHhhcCC-ccEEeecc------------------CcCCCCccccHHHHH
Q 040616 115 VTIGELKRLVEE-GKI-KHIDLSEASASTIRRAHTIHP-ITVVRLEW------------------SLRSRDVEEEIVPTC 173 (208)
Q Consensus 115 ~~~~~l~~l~~~-G~i-r~iGvs~~~~~~l~~~~~~~~-~~~~q~~~------------------~~~~~~~~~~~l~~~ 173 (208)
++.+.+.++.++ +.. ..+=+++|+.+.+.++.+..| +.+..+.. ++-......++++.+
T Consensus 127 ~~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~ 206 (252)
T 3qvq_A 127 ETIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVSAIPSAWQERLEHLDCAGLHIHQSFFDVQQVSDI 206 (252)
T ss_dssp HHHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCTTHHHHHHHHTCSEEEEEGGGCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCchhHHHHHHHcCCeEEecchhhCCHHHHHHH
Confidence 444555554444 332 467789999988887765422 11111110 000011234789999
Q ss_pred HHhCCcEEEccc
Q 040616 174 RELGIGIVAYSL 185 (208)
Q Consensus 174 ~~~gi~v~a~~p 185 (208)
+++|+.|.+|.+
T Consensus 207 ~~~G~~v~~WTv 218 (252)
T 3qvq_A 207 KAAGYKVLAFTI 218 (252)
T ss_dssp HHTTCEEEEECC
T ss_pred HHCCCEEEEEcC
Confidence 999999999965
No 136
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=57.71 E-value=33 Score=28.48 Aligned_cols=82 Identities=9% Similarity=-0.064 Sum_probs=56.2
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc---ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHH
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI---KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCR 174 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i---r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~ 174 (208)
.++.++-.|-+.. -++.+.+++++-.+ -+.|=+-++...+.++++...++++|+..+-.-- ..-..+...|+
T Consensus 236 ~~l~~iEeP~~~~----d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~~GGitea~kia~lA~ 311 (404)
T 3ekg_A 236 YGLKWIEEALPPD----DYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGWCGGVTELLKISALAD 311 (404)
T ss_dssp GTCCEEECCSCTT----CHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHH
T ss_pred cCCcEEecCCCcc----cHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhhcCCccHHHHHHHHHH
Confidence 3455555553322 25666777776544 2566677888899999988889999988776432 11347899999
Q ss_pred HhCCcEEEcc
Q 040616 175 ELGIGIVAYS 184 (208)
Q Consensus 175 ~~gi~v~a~~ 184 (208)
++|+.+...+
T Consensus 312 a~gv~v~~h~ 321 (404)
T 3ekg_A 312 AHNALVVPHG 321 (404)
T ss_dssp HTTCEECCCC
T ss_pred HcCCEEEecC
Confidence 9999997654
No 137
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=56.96 E-value=23 Score=29.30 Aligned_cols=144 Identities=13% Similarity=0.129 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHC-CCCeEeCCCCCCCCchhhhcce-------EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHc
Q 040616 23 ESCMIALIHHAIDS-GITVLDTSNVYGPHTNEILLAR-------VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCL 94 (208)
Q Consensus 23 ~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~e~~~g~-------~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 94 (208)
.++..+.++.+++. |++.|=.--........+.+.. +-|..-. + ..++.+...+- -+.|+.+
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~~~~~l~vDa-----N----~~w~~~~A~~~-~~~l~~~ 238 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREALPGVNLRVDP-----N----AAWSVPDSVRA-GIALEEL 238 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHHCTTSEEEEEC-----T----TCSCHHHHHHH-HHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCCCeEEeeC-----C----CCCCHHHHHHH-HHHHhhc
Confidence 46677777888888 9997643211110011122221 1222221 1 23444443322 2344554
Q ss_pred CCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHH
Q 040616 95 DVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPT 172 (208)
Q Consensus 95 ~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~ 172 (208)
+ +.++..|-+ .++.+.+++++-.+ -+.|=+-++...+.++++...++++|+..+..-. ..-..+...
T Consensus 239 ~-----i~~iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~ 307 (398)
T 4dye_A 239 D-----LEYLEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAH 307 (398)
T ss_dssp C-----CSEEECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred C-----CCEEcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHH
Confidence 4 445555533 47778888876444 3445566788899999998889999998766432 112379999
Q ss_pred HHHhCCcEEEcccCc
Q 040616 173 CRELGIGIVAYSLLG 187 (208)
Q Consensus 173 ~~~~gi~v~a~~pl~ 187 (208)
|+++|+.+...+...
T Consensus 308 A~~~gi~~~~h~~~e 322 (398)
T 4dye_A 308 CETFGLGMNLHSGGE 322 (398)
T ss_dssp HHHHTCEEEECCSCC
T ss_pred HHHcCCeEEEcCCcc
Confidence 999999999887543
No 138
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=56.45 E-value=80 Score=26.60 Aligned_cols=96 Identities=9% Similarity=-0.014 Sum_probs=63.2
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc-C-CcceEeeCcc--cHHHHHHHhhcCCccEE
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE-G-KIKHIDLSEA--SASTIRRAHTIHPITVV 154 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGvs~~--~~~~l~~~~~~~~~~~~ 154 (208)
++++..+-+++.|+.+ +++++-.|-+..+ |+.+.+|.+. | .|--.|=-.+ +++.+.++++....+++
T Consensus 290 t~~eai~~~~~lle~y-----~i~~IEdPl~~dD----~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i 360 (449)
T 3uj2_A 290 ASEELVAHWKSLCERY-----PIVSIEDGLDEED----WEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSI 360 (449)
T ss_dssp EHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHHhc-----CceEEECCCCcch----HHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEE
Confidence 4555555555556654 5888888855443 4555555554 2 4443343223 68999999998889999
Q ss_pred eeccCcCCCC-ccccHHHHHHHhCCcEEEc
Q 040616 155 RLEWSLRSRD-VEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 155 q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~ 183 (208)
|+..+-.-.- .-..+...|+++|+.++..
T Consensus 361 ~iKv~~iGGiTea~kia~lA~~~Gi~~~v~ 390 (449)
T 3uj2_A 361 LIKLNQIGTVSETLEAIKMAHKAGYTAVVS 390 (449)
T ss_dssp EECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred EECccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 9988755431 1237899999999995543
No 139
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=56.02 E-value=33 Score=28.29 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=56.8
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHHHhC
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCRELG 177 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~~~g 177 (208)
++.+++.|-+.. .++.+.+++++-.+- +.|=+-++.++++++++....+++|+..+..-- ..-..+...|+++|
T Consensus 237 ~i~~iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~g 312 (400)
T 4dxk_A 237 QTFWHEDPIKMD----SLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWH 312 (400)
T ss_dssp CCSEEECCBCTT----SGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTT
T ss_pred CCCEEEcCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcC
Confidence 445566664332 245566777765553 444466788999999998889999998776532 11337899999999
Q ss_pred CcEEEcccC
Q 040616 178 IGIVAYSLL 186 (208)
Q Consensus 178 i~v~a~~pl 186 (208)
+.+...++.
T Consensus 313 i~~~~h~~~ 321 (400)
T 4dxk_A 313 LPVAPHXCT 321 (400)
T ss_dssp CCEEEC-CC
T ss_pred CEEEecCCC
Confidence 999877653
No 140
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=55.96 E-value=77 Score=25.36 Aligned_cols=106 Identities=11% Similarity=0.115 Sum_probs=58.8
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCC-HH--HHHHHHHHHHHcCCcceEeeC-c--ccHHHHHHHhhc--
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIP-IE--VTIGELKRLVEEGKIKHIDLS-E--ASASTIRRAHTI-- 148 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~-~~--~~~~~l~~l~~~G~ir~iGvs-~--~~~~~l~~~~~~-- 148 (208)
.++.+.. ..+-+.|.++|+++|.+-+.-.|....+ .. ..|+.|..+++.-.++.-.+. + ..++.+..+...
T Consensus 20 ~~~~~~k-~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~ 98 (320)
T 3dxi_A 20 DFNSKIV-DAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPII 98 (320)
T ss_dssp CCCHHHH-HHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGT
T ss_pred cCCHHHH-HHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhh
Confidence 3444444 4455678889999999998765543211 00 125555555544445555553 2 222334443221
Q ss_pred CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEc
Q 040616 149 HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 149 ~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~ 183 (208)
..++.+.+..++-+-..-.+.+++++++|+.+...
T Consensus 99 ~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 99 GLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp TTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45666665544432211237788899999988764
No 141
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=55.77 E-value=27 Score=28.54 Aligned_cols=143 Identities=9% Similarity=0.033 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHCCCCeEeCCCC-CCCC--chhh-------hcce-EEEEeecceecCCCCccCCCC-hHHHHHHHHHHH
Q 040616 24 SCMIALIHHAIDSGITVLDTSNV-YGPH--TNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGD-PAYLRAACEASL 91 (208)
Q Consensus 24 ~~~~~~l~~A~~~Gi~~~DtA~~-Yg~g--~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~-~~~i~~~~~~sL 91 (208)
++..+..+.+.+.|++.|..--. +|.. ...+ .+|. +-|...... .++ .+...+ +-+.|
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~---------~~~d~~~A~~-~~~~l 217 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLAS---------KWHTCGHSAM-MAKRL 217 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT---------TTCSHHHHHH-HHHHS
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC---------CCCCHHHHHH-HHHHh
Confidence 55667778888999998864321 2110 0111 1222 334333321 234 444332 22344
Q ss_pred HHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccH
Q 040616 92 KCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEI 169 (208)
Q Consensus 92 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 169 (208)
+.+++ .++..|-+.. .++.+.++++.-.+- +.|=+-++.+.+.++++....+++|+..+..-. ..-..+
T Consensus 218 ~~~~i-----~~iEqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 288 (374)
T 3sjn_A 218 EEFNL-----NWIEEPVLAD----SLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKI 288 (374)
T ss_dssp GGGCC-----SEEECSSCTT----CHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHH
T ss_pred hhcCc-----eEEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHH
Confidence 44444 4455664322 366777787765553 344456788899999988888999988776532 113379
Q ss_pred HHHHHHhCCcEEEccc
Q 040616 170 VPTCRELGIGIVAYSL 185 (208)
Q Consensus 170 l~~~~~~gi~v~a~~p 185 (208)
...|+++|+.+...+.
T Consensus 289 a~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 289 YDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHTCEECCBCC
T ss_pred HHHHHHcCCEEEecCC
Confidence 9999999999998776
No 142
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=55.52 E-value=25 Score=29.01 Aligned_cols=89 Identities=12% Similarity=0.002 Sum_probs=58.7
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc------CCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCC
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE------GKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRS 162 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~------G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~ 162 (208)
+.+++| +.+++.++-.|-+ .+ ++.+.++++. +.--+.|=+-+ ...+.++++....+++|+..+..-
T Consensus 219 ~~~~~L--~~~~l~~iEeP~~-~d----~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~d~~~GG 290 (392)
T 3v5c_A 219 EVLAAL--SDVNLYWLEAAFH-ED----EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQYDIIWPG 290 (392)
T ss_dssp HHHHHT--TTSCCCEEECSSS-CC----HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECCBTTTBC
T ss_pred HHHHhc--ccCCCeEEeCCCC-cC----HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEeCCCCCC
Confidence 345555 3467888888865 23 3344455442 34455666666 677888888888999999887411
Q ss_pred CCccccHHHHHHHhCCcEEEccc
Q 040616 163 RDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 163 ~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
-..-..+...|+++|+.+...++
T Consensus 291 itea~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 291 FTHWMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp HHHHHHHHHHHHHTTCEECCBCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCC
Confidence 11223788999999999987764
No 143
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=55.50 E-value=15 Score=28.88 Aligned_cols=50 Identities=14% Similarity=0.026 Sum_probs=37.6
Q ss_pred HHHHHHHHHHcCCCcccEEEeecCCCC-----CCHHHHHHHHHHHHH-cCCcceEe
Q 040616 84 RAACEASLKCLDVDCIDLYYQHRIDTK-----IPIEVTIGELKRLVE-EGKIKHID 133 (208)
Q Consensus 84 ~~~~~~sL~~L~~d~iDl~~lh~~~~~-----~~~~~~~~~l~~l~~-~G~ir~iG 133 (208)
++.+.+.|++||+..=|.+++|..-.. .....++++|.+++. +|.+--=.
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt 72 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPT 72 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEec
Confidence 577788999999999999999986322 124668899988875 77665333
No 144
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=55.41 E-value=18 Score=28.53 Aligned_cols=103 Identities=10% Similarity=-0.081 Sum_probs=58.2
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
.++.+... .+-+.|.++|+++|.+-....|.......+.++.+..+.+...++..++. .+...++.+.+.. .+.+.+
T Consensus 23 ~~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag-~~~v~i 99 (298)
T 2cw6_A 23 IVSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAG-AKEVVI 99 (298)
T ss_dssp CCCHHHHH-HHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTT-CSEEEE
T ss_pred CCCHHHHH-HHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCC-CCEEEE
Confidence 34555544 56677889999999998765553111112233333344333233433444 4667788887753 355555
Q ss_pred ccCcCCC--------C------ccccHHHHHHHhCCcEEE
Q 040616 157 EWSLRSR--------D------VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 157 ~~~~~~~--------~------~~~~~l~~~~~~gi~v~a 182 (208)
..+.-+. . .-.+.+++++++|+.+.+
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~ 139 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRG 139 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 3332211 0 113678999999999874
No 145
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=55.29 E-value=90 Score=25.94 Aligned_cols=100 Identities=7% Similarity=-0.106 Sum_probs=64.3
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcC--Ccc-eEee-CcccHHHHHHHhhcCCccE
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEG--KIK-HIDL-SEASASTIRRAHTIHPITV 153 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G--~ir-~iGv-s~~~~~~l~~~~~~~~~~~ 153 (208)
++++...+-+++..++ .+++++-.|-+..+ |+.+.++.++- .|- +.|= +.++...+.++++....++
T Consensus 267 ~t~~~ai~~~~~L~~~-----~~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~ 337 (431)
T 2fym_A 267 FTSEEFTHFLEELTKQ-----YPIVSIEDGLDESD----WDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANS 337 (431)
T ss_dssp ECHHHHHHHHHHHHHH-----SCEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSE
T ss_pred CCHHHHHHHHHHHHHh-----CCceEEECCCCccc----HHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCE
Confidence 3555544444433332 46889998865444 45555555542 332 2232 5678999999999988999
Q ss_pred EeeccCcCCCC-ccccHHHHHHHhCCcEEEcccC
Q 040616 154 VRLEWSLRSRD-VEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 154 ~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl 186 (208)
+|+..+-.-.- .-..+...|+++|+.++..+-.
T Consensus 338 i~ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~ 371 (431)
T 2fym_A 338 ILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRS 371 (431)
T ss_dssp EEECGGGTCSHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred EEECccccCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 99987765431 1237899999999999764433
No 146
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=55.09 E-value=93 Score=26.02 Aligned_cols=99 Identities=7% Similarity=-0.065 Sum_probs=65.6
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc-C-CcceEee--CcccHHHHHHHhhcCCcc
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE-G-KIKHIDL--SEASASTIRRAHTIHPIT 152 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGv--s~~~~~~l~~~~~~~~~~ 152 (208)
..+++...+-+++.++.+ +++++-.|-+..+ |+.+.+|.+. + .|--+|= +-.+++.+.++++....+
T Consensus 262 ~~t~~eai~~~~~ll~~y-----~i~~IEdPl~~dD----~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d 332 (428)
T 3tqp_A 262 QLTSEEMIDRLTEWTKKY-----PVISIEDGLSEND----WAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIAN 332 (428)
T ss_dssp CBCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCS
T ss_pred ccCHHHHHHHHHHHHhhc-----ccceEeCCCCccc----HHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCC
Confidence 356677666666666654 5888888865443 4445555543 2 2433453 233889999999988889
Q ss_pred EEeeccCcCCCC-ccccHHHHHHHhCCcEEEcc
Q 040616 153 VVRLEWSLRSRD-VEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 153 ~~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~ 184 (208)
++|+..+-.-.- .-..+...|+++|+.++...
T Consensus 333 ~i~iKv~~iGGiTealkia~lA~~~G~~~~v~H 365 (428)
T 3tqp_A 333 AILVKLNQIGTLTETLATVGLAKSNKYGVIISH 365 (428)
T ss_dssp EEEECHHHHCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEecccccCCHHHHHHHHHHHHHcCCeEEEeC
Confidence 999988754331 12378999999999966543
No 147
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=55.06 E-value=27 Score=29.34 Aligned_cols=60 Identities=10% Similarity=0.118 Sum_probs=38.1
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEee-cCCCC----------C-CHHH---HHH-HHHHHHHcCCcceEeeCccc
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQH-RIDTK----------I-PIEV---TIG-ELKRLVEEGKIKHIDLSEAS 138 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~~----------~-~~~~---~~~-~l~~l~~~G~ir~iGvs~~~ 138 (208)
..+.+.+.+.++... .|+.+++-++.+. .|... . +.++ .++ +.+.|.+.| ...+++|||.
T Consensus 216 get~e~~~~tl~~~~-~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~G-y~~yeis~fa 291 (457)
T 1olt_A 216 KQTPESFAFTLKRVA-ELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG-YQFIGMDHFA 291 (457)
T ss_dssp TCCHHHHHHHHHHHH-HHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTT-CEEEETTEEE
T ss_pred CCCHHHHHHHHHHHH-hcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCC-CeEEEechhc
Confidence 356778888877654 6899999998776 33210 1 1222 233 445566667 5899999975
No 148
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=54.60 E-value=32 Score=29.16 Aligned_cols=63 Identities=6% Similarity=0.065 Sum_probs=44.1
Q ss_pred HHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEee-CcccHHHHHHHhhcCCccEEeecc
Q 040616 92 KCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDL-SEASASTIRRAHTIHPITVVRLEW 158 (208)
Q Consensus 92 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 158 (208)
..+|.||+=+++........+.+.+-+ +.+.-.+..+|| .|-+.+.+.++.+..+++++|+.=
T Consensus 272 ~~~Gad~iGfIf~~~SpR~V~~~~a~~----i~~~~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG 335 (452)
T 1pii_A 272 YDAGAIYGGLIFVATSPRCVNVEQAQE----VMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHG 335 (452)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHHHH----HHHHCCCEEEEEESSCCHHHHHHHHHHHTCSEEEECS
T ss_pred HhcCCCEEEeecCCCCCCCCCHHHHHH----HHhcCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 456899998886532223344443333 222357899998 578899999999999999999853
No 149
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=54.50 E-value=12 Score=30.23 Aligned_cols=86 Identities=15% Similarity=0.036 Sum_probs=56.0
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHHHhC
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCRELG 177 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~~~g 177 (208)
.++.++-.|-+..+ ++.+.+ .+.+.=-+.|=|-++...+.++++...++++|+.....-. ..-..+...|+++|
T Consensus 191 ~~i~~iEqP~~~~d----~~~~~~-~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~g 265 (342)
T 2okt_A 191 EQVLYIEEPFKDIS----MLDEVA-DGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHG 265 (342)
T ss_dssp GCEEEEECCCSSGG----GGGGSC-TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTT
T ss_pred CCCcEEECCCCCcc----HHHHHH-hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCC
Confidence 46777777644322 222222 1122223455566788999999988889999997765322 11347899999999
Q ss_pred CcEEEcccCccc
Q 040616 178 IGIVAYSLLGRG 189 (208)
Q Consensus 178 i~v~a~~pl~~G 189 (208)
+.++..+.+.++
T Consensus 266 i~~~~~~~~es~ 277 (342)
T 2okt_A 266 AKVVIGGMYEYG 277 (342)
T ss_dssp CEEEEBCSSCCH
T ss_pred CEEEEcCCcccH
Confidence 999998876554
No 150
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=54.36 E-value=31 Score=28.34 Aligned_cols=82 Identities=11% Similarity=0.054 Sum_probs=56.5
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHh
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCREL 176 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~ 176 (208)
.++.++-.|-+ ..+.++.+.++++...+ -+.|=|-++...+.++++....+++|+...-.--- .-..+...|+.+
T Consensus 235 ~~~~~iEeP~~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~ 311 (388)
T 4h83_A 235 LNIRWFEEPVE---WHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSY 311 (388)
T ss_dssp SCCCCEESCBC---STTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHT
T ss_pred cCcceeecCcc---cccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHC
Confidence 45555555532 12346677777777665 45666788999999999998899999877654321 123788899999
Q ss_pred CCcEEEc
Q 040616 177 GIGIVAY 183 (208)
Q Consensus 177 gi~v~a~ 183 (208)
|+.+..+
T Consensus 312 gv~v~~h 318 (388)
T 4h83_A 312 DVQMGHH 318 (388)
T ss_dssp TCEECCC
T ss_pred CCEEEec
Confidence 9987544
No 151
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=54.35 E-value=34 Score=26.05 Aligned_cols=64 Identities=5% Similarity=0.105 Sum_probs=38.3
Q ss_pred HHHHcCCcceEeeCcccHHHHHHHhhcCC-ccEEeec-----------------------cCcCCCCccccHHHHHHHhC
Q 040616 122 RLVEEGKIKHIDLSEASASTIRRAHTIHP-ITVVRLE-----------------------WSLRSRDVEEEIVPTCRELG 177 (208)
Q Consensus 122 ~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~q~~-----------------------~~~~~~~~~~~~l~~~~~~g 177 (208)
.+++.|....+=+++|+.+.+.++.+..| +.+..+. +++-......++++.++++|
T Consensus 125 ~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G 204 (250)
T 3ks6_A 125 GLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGLMAQVQAAG 204 (250)
T ss_dssp HHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCHHHHHHHHHTT
T ss_pred HHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhhCCHHHHHHHHHCC
Confidence 34445667778888888887777765422 1111110 11111112347899999999
Q ss_pred CcEEEccc
Q 040616 178 IGIVAYSL 185 (208)
Q Consensus 178 i~v~a~~p 185 (208)
+.|.+|.+
T Consensus 205 ~~V~~WTv 212 (250)
T 3ks6_A 205 LDFGCWAA 212 (250)
T ss_dssp CEEEEECC
T ss_pred CEEEEEeC
Confidence 99999965
No 152
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=53.72 E-value=18 Score=28.50 Aligned_cols=47 Identities=21% Similarity=0.130 Sum_probs=35.9
Q ss_pred HHHHHHHHHHcCCCcccEEEeecCCCC-----CCHHHHHHHHHHHHH-cCCcc
Q 040616 84 RAACEASLKCLDVDCIDLYYQHRIDTK-----IPIEVTIGELKRLVE-EGKIK 130 (208)
Q Consensus 84 ~~~~~~sL~~L~~d~iDl~~lh~~~~~-----~~~~~~~~~l~~l~~-~G~ir 130 (208)
++.+.+.|+.||+..=|.+++|..-.. .....++++|.+++- +|.+-
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLv 67 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIV 67 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEE
Confidence 567788899999999999999985322 235668899988774 77654
No 153
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=53.43 E-value=29 Score=28.49 Aligned_cols=78 Identities=10% Similarity=-0.016 Sum_probs=53.9
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHc-----CCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHH
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEE-----GKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVP 171 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~-----G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~ 171 (208)
.++.++..|-+ +.++.+.++++. -.|- +.|= -++.+.++++++....+++|+..+.. .- .-..+..
T Consensus 227 ~~i~~iE~P~~-----~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik~~~~-Git~~~~i~~ 299 (392)
T 3p3b_A 227 VNLYWLEEAFH-----EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQYDIIWP-GFTHWMELGE 299 (392)
T ss_dssp SCEEEEECSSS-----CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECCBTTTB-CHHHHHHHHH
T ss_pred cCCCEEecCCc-----ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEeCcccc-CHHHHHHHHH
Confidence 46667777754 235556666665 2332 2233 45678899999888899999988876 32 1237899
Q ss_pred HHHHhCCcEEEc
Q 040616 172 TCRELGIGIVAY 183 (208)
Q Consensus 172 ~~~~~gi~v~a~ 183 (208)
.|+++|+.++..
T Consensus 300 ~A~~~gi~~~~h 311 (392)
T 3p3b_A 300 KLDAHGLRSAPH 311 (392)
T ss_dssp HHHHTTCEECCB
T ss_pred HHHHcCCEEEec
Confidence 999999998886
No 154
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=53.27 E-value=51 Score=27.30 Aligned_cols=145 Identities=8% Similarity=-0.025 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCC--CCCC--C---------chhh-------hcce-EEEEeecceecCCCCccCCCCh
Q 040616 22 PESCMIALIHHAIDSGITVLDTSN--VYGP--H---------TNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDP 80 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~--~Yg~--g---------~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~ 80 (208)
+.++..+..+.+++.|++.|-.-. .|.. | ...+ .+|. +-|..... ..++.
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN---------~~~~~ 214 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTH---------GQMVP 214 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCC---------SCBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECC---------CCCCH
Confidence 566777778888899999886532 1110 0 0011 1222 33433332 13444
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccC
Q 040616 81 AYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWS 159 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~ 159 (208)
+...+- -+.|+.+++ .++..|-+.. .++.+.++++.-.|- +.|=+-++.+.++++++....+++|+..+
T Consensus 215 ~~A~~~-~~~L~~~~i-----~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 284 (412)
T 4e4u_A 215 SSAIRL-AKRLEKYDP-----LWFEEPVPPG----QEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNVA 284 (412)
T ss_dssp HHHHHH-HHHHGGGCC-----SEEECCSCSS----CHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTT
T ss_pred HHHHHH-HHHhhhcCC-----cEEECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 443332 234555554 4455664332 356777787765553 34445678889999999888999999877
Q ss_pred cCCCC-ccccHHHHHHHhCCcEEEccc
Q 040616 160 LRSRD-VEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 160 ~~~~~-~~~~~l~~~~~~gi~v~a~~p 185 (208)
-.--- .-..+...|+++|+.+...+.
T Consensus 285 ~~GGit~~~kia~~A~~~gi~v~~h~~ 311 (412)
T 4e4u_A 285 RVGGLLEAKKIATLAEVHYAQIAPHLY 311 (412)
T ss_dssp TTTSHHHHHHHHHHHHHTTCEECCCCC
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 65321 133789999999999876653
No 155
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=52.90 E-value=26 Score=26.77 Aligned_cols=63 Identities=14% Similarity=0.253 Sum_probs=37.6
Q ss_pred HHHcCCcceEeeCcccHHHHHHHhhcCC-ccEEeecc------------------CcCCCCccccHHHHHHHhCCcEEEc
Q 040616 123 LVEEGKIKHIDLSEASASTIRRAHTIHP-ITVVRLEW------------------SLRSRDVEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 123 l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~q~~~------------------~~~~~~~~~~~l~~~~~~gi~v~a~ 183 (208)
+++.|.-+.+=+++|+.+.+..+.+..| +.+..+.. ++-......++++.++++|+.|.+|
T Consensus 138 l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~w 217 (252)
T 2pz0_A 138 IKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNIIPELVEGCKKNGVKLFPW 217 (252)
T ss_dssp HHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSSTHHHHHHTTCSEEEEBGGGCCHHHHHHHHHTTCEECCB
T ss_pred HHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccccHHHHHHHcCCeEEecchhcCCHHHHHHHHHCCCEEEEE
Confidence 3445666677799999988777765422 11111110 0101112347889999999999998
Q ss_pred cc
Q 040616 184 SL 185 (208)
Q Consensus 184 ~p 185 (208)
.+
T Consensus 218 Tv 219 (252)
T 2pz0_A 218 TV 219 (252)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 156
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=52.63 E-value=80 Score=24.57 Aligned_cols=101 Identities=12% Similarity=0.135 Sum_probs=66.0
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc-CCcceEeeCcccHHHHHHHhhc--CCccEEe
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE-GKIKHIDLSEASASTIRRAHTI--HPITVVR 155 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q 155 (208)
+.+.+.+..++.. .-|-|.||+-.--. .....+.+...++.+++. +. -|.|-+++++.++++++. ...-+|-
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v~~aal~a~~Ga~iINd 106 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVVDL--PCCLDSTNPDAIEAGLKVHRGHAMINS 106 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHCCC--CEEEECSCHHHHHHHHHHCCSCCEEEE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhCCC--eEEEeCCCHHHHHHHHHhCCCCCEEEE
Confidence 3455555554444 57888888875442 223355666667777665 32 467778999999999988 5544443
Q ss_pred eccCcCCCCcc--ccHHHHHHHhCCcEEEcccCccc
Q 040616 156 LEWSLRSRDVE--EEIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 156 ~~~~~~~~~~~--~~~l~~~~~~gi~v~a~~pl~~G 189 (208)
+.- . . + .++++.++++|.+++.+..-..|
T Consensus 107 vs~--~-~--d~~~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 107 TSA--D-Q--WKMDIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp ECS--C-H--HHHHHHHHHHHHHTCEEEEESCBTTB
T ss_pred CCC--C-c--cccHHHHHHHHHcCCCEEEEecCCCC
Confidence 332 2 1 3 57999999999999998753334
No 157
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=52.21 E-value=91 Score=25.86 Aligned_cols=87 Identities=13% Similarity=0.232 Sum_probs=57.6
Q ss_pred EEeecCCC-----------CCCHHHHHHHHHHHH-HcCC------cceEeeC--cccHHHHHHHhhc---CCccEEeecc
Q 040616 102 YYQHRIDT-----------KIPIEVTIGELKRLV-EEGK------IKHIDLS--EASASTIRRAHTI---HPITVVRLEW 158 (208)
Q Consensus 102 ~~lh~~~~-----------~~~~~~~~~~l~~l~-~~G~------ir~iGvs--~~~~~~l~~~~~~---~~~~~~q~~~ 158 (208)
+-||.+++ ..+++++++++.++. +.|. |+++=+- |.+.+++.++.+. .+..++-++|
T Consensus 232 iSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~~VnLIpy 311 (404)
T 3rfa_A 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 (404)
T ss_dssp EECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEEEEC
T ss_pred ecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCCcEEEEec
Confidence 56888764 245788899996665 4454 4555554 4456666666554 4566778899
Q ss_pred CcCCCC----c-c---ccHHHHHHHhCCcEEEcccCcc
Q 040616 159 SLRSRD----V-E---EEIVPTCRELGIGIVAYSLLGR 188 (208)
Q Consensus 159 ~~~~~~----~-~---~~~l~~~~~~gi~v~a~~pl~~ 188 (208)
||+... + . ..+.+.++++|+.+....+.+.
T Consensus 312 nP~~~~~~~~ps~e~i~~f~~iL~~~Gi~vtiR~~~G~ 349 (404)
T 3rfa_A 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD 349 (404)
T ss_dssp CCCTTCCCCBCCHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEcCCCCc
Confidence 986432 1 1 1466778889999999887754
No 158
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=52.21 E-value=67 Score=27.66 Aligned_cols=94 Identities=11% Similarity=0.017 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEeecCCCCCC----HHHHHHHHHHHHHcCCcceEeeCcccHHHH--HHHhhcCCccE
Q 040616 80 PAYLRAACEASLKCLDVDCIDLYYQHRIDTKIP----IEVTIGELKRLVEEGKIKHIDLSEASASTI--RRAHTIHPITV 153 (208)
Q Consensus 80 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~----~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l--~~~~~~~~~~~ 153 (208)
.+.+++.+++..++-++|++=++...+-++..+ ..+++++|++..+++.-. -++..+ ..++...-+-+
T Consensus 220 ve~ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~l~~ai~~~~~e------ispS~~YA~AAl~aG~~fI 293 (533)
T 1p1j_A 220 LQRIRRDIQNFKEENALDKVIVLWTANTERYVEVSPGVNDTMENLLQSIKNDHEE------IAPSTIFAAASILEGVPYI 293 (533)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEECSCCCCCCCCCTTTTSSHHHHHHHHHTTCTT------CCHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEeCcCccCCCCCccccccCHHHHHHHHhcCCcc------CChHHHHHHHHHhcCCcee
Confidence 445677777777888888766665555433322 345788888888876522 233332 22222222223
Q ss_pred EeeccCcCCCCccccHHHHHHHhCCcEEEc
Q 040616 154 VRLEWSLRSRDVEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 154 ~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~ 183 (208)
+=.+-+.. ..++.+.++++|+.+.+-
T Consensus 294 N~sP~~t~----~P~~~elae~~gvpI~GD 319 (533)
T 1p1j_A 294 NGSPQNTF----VPGLVQLAEHEGTFIAGD 319 (533)
T ss_dssp ECSCSCCC----CHHHHHHHHHHTCCEEES
T ss_pred ecCCcccC----CHHHHHHHHHhCCceecc
Confidence 33332221 246788888888776653
No 159
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=50.68 E-value=30 Score=27.41 Aligned_cols=51 Identities=18% Similarity=0.161 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHcCCCcccEEEeecCCCCC-----CHHHHHHHHHHHH-HcCCcceEe
Q 040616 83 LRAACEASLKCLDVDCIDLYYQHRIDTKI-----PIEVTIGELKRLV-EEGKIKHID 133 (208)
Q Consensus 83 i~~~~~~sL~~L~~d~iDl~~lh~~~~~~-----~~~~~~~~l~~l~-~~G~ir~iG 133 (208)
-++.+.+.|+.||+..=|.+++|..-... ....++++|.+++ ++|.+--=-
T Consensus 23 T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt 79 (286)
T 3sma_A 23 TRDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPT 79 (286)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEec
Confidence 46788899999999999999999864433 2467899998888 578765444
No 160
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=50.43 E-value=44 Score=26.39 Aligned_cols=34 Identities=0% Similarity=-0.100 Sum_probs=24.2
Q ss_pred HHHHHH-HHHHHcCCcceEeeCcccHHHHHHHhhc
Q 040616 115 VTIGEL-KRLVEEGKIKHIDLSEASASTIRRAHTI 148 (208)
Q Consensus 115 ~~~~~l-~~l~~~G~ir~iGvs~~~~~~l~~~~~~ 148 (208)
+..+.+ +.+++.|.-..+=+++|+.+.+.++.+.
T Consensus 165 ~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~ 199 (313)
T 3l12_A 165 EMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQ 199 (313)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHH
Confidence 444444 3444567778889999999988887665
No 161
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=50.27 E-value=48 Score=28.02 Aligned_cols=99 Identities=10% Similarity=-0.001 Sum_probs=61.8
Q ss_pred ChHHHHHHHHHHHH----HcC-CCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcC---C
Q 040616 79 DPAYLRAACEASLK----CLD-VDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIH---P 150 (208)
Q Consensus 79 ~~~~i~~~~~~sL~----~L~-~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~---~ 150 (208)
+.+.+.+.++..-+ +.+ .-.+|++.++.-..+ .+.....++.+++. .=--+-+.+++++.++++++.. .
T Consensus 103 ~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~d--pe~~~~vVk~V~e~-~dvPL~IDS~dpevleaALea~a~~~ 179 (446)
T 4djd_C 103 SSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADD--PAAFKAAVASVAAA-TQLNLVLMADDPDVLKEALAGVADRK 179 (446)
T ss_dssp CHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSS--THHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHGGGGGGC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCC--HHHHHHHHHHHHHh-CCCCEEEecCCHHHHHHHHHhhcCcC
Confidence 44555555544421 233 126899999976433 24444444444442 2235777789999999998863 3
Q ss_pred ccEEeeccCcCCCCccccHHHHHHHhCCcEEEccc
Q 040616 151 ITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 151 ~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
+.++-.. ...-+.+.+.++++|..++++++
T Consensus 180 plI~sat-----~dn~e~m~~lAa~y~~pVi~~~~ 209 (446)
T 4djd_C 180 PLLYAAT-----GANYEAMTALAKENNCPLAVYGN 209 (446)
T ss_dssp CEEEEEC-----TTTHHHHHHHHHHTTCCEEEECS
T ss_pred CeeEecc-----hhhHHHHHHHHHHcCCcEEEEec
Confidence 4444433 21123799999999999999987
No 162
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=50.14 E-value=35 Score=27.99 Aligned_cols=147 Identities=15% Similarity=0.056 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHHHC-CCCeEeCCCCCCCC-chhh-------hcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDS-GITVLDTSNVYGPH-TNEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASL 91 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g-~~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 91 (208)
+.++..+.++.+++. |++.|-.--..... ...+ .+|. +-|..... ..++.+...+- -+.|
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN---------~~~~~~~A~~~-~~~l 236 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFN---------QSLDPAEATRR-IARL 236 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECT---------TCSCHHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCC---------CCCCHHHHHHH-HHHH
Confidence 556677778888888 99887532111000 0111 1222 33433332 13444443322 2344
Q ss_pred HHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccH
Q 040616 92 KCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEI 169 (208)
Q Consensus 92 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 169 (208)
+.++ +.++..|-+.. .++.+.+++++-.| -+.|=+-++...+.++++....+++|+..+..-- ..-..+
T Consensus 237 ~~~~-----i~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i 307 (383)
T 3toy_A 237 ADYD-----LTWIEEPVPQE----NLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNV 307 (383)
T ss_dssp GGGC-----CSEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHH
T ss_pred HhhC-----CCEEECCCCcc----hHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHH
Confidence 5554 44556664432 25567777776444 3445566888999999998889999988776532 112378
Q ss_pred HHHHHHhCCcEEEcccCc
Q 040616 170 VPTCRELGIGIVAYSLLG 187 (208)
Q Consensus 170 l~~~~~~gi~v~a~~pl~ 187 (208)
...|+++|+.+...+.+.
T Consensus 308 a~~A~~~gi~~~~h~~~~ 325 (383)
T 3toy_A 308 AGQADAASIPMSSHILPE 325 (383)
T ss_dssp HHHHHHHTCCBCCCSCHH
T ss_pred HHHHHHcCCEEeecCHHH
Confidence 999999999998766543
No 163
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=50.03 E-value=62 Score=26.32 Aligned_cols=90 Identities=10% Similarity=-0.019 Sum_probs=59.1
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-cccc
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEE 168 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 168 (208)
++.| +..++ ++-.|-+ + ++.+.++++.-.+ -+.|=|-++...+.++++..-++++|+...-.-.- .-..
T Consensus 216 ~~~l--~~~~~-~iEeP~~--~----~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~~ 286 (376)
T 4h2h_A 216 SREC--PDIPF-VMEQPCN--S----FEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMRA 286 (376)
T ss_dssp HHHC--TTSCE-EEESCSS--S----HHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHH
T ss_pred HHHH--hhccc-cccCCcc--h----hhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCccccccceeCCcHHHHH
Confidence 3444 33455 5666532 1 4456667665444 34555678888999999888888998866543221 1237
Q ss_pred HHHHHHHhCCcEEEcccCccc
Q 040616 169 IVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 169 ~l~~~~~~gi~v~a~~pl~~G 189 (208)
+...|+.+|+.+...+.++++
T Consensus 287 ia~~a~~~gi~~~~~~~~~~~ 307 (376)
T 4h2h_A 287 FRDFCAARNLPHTCDDAWGGD 307 (376)
T ss_dssp HHHHHHHHTCCEECBCSSCSH
T ss_pred HHHHHHHcCCCEEeCCCCccH
Confidence 889999999999987776654
No 164
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=49.96 E-value=97 Score=24.72 Aligned_cols=96 Identities=15% Similarity=0.082 Sum_probs=59.6
Q ss_pred HHHHHHHHHHH--cCCCcccEEEee-cCCCC-----CCHHHHHHHHHHHHHc-CCcceEeeCcccHHHHHHHhhcCCccE
Q 040616 83 LRAACEASLKC--LDVDCIDLYYQH-RIDTK-----IPIEVTIGELKRLVEE-GKIKHIDLSEASASTIRRAHTIHPITV 153 (208)
Q Consensus 83 i~~~~~~sL~~--L~~d~iDl~~lh-~~~~~-----~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~ 153 (208)
...+++..++. -|-|.||+=.-- +|... ..++.+...++.++++ +. -|.|-+++++.++++++....-+
T Consensus 32 ~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~v--piSIDT~~~~Va~aAl~aGa~iI 109 (314)
T 2vef_A 32 LEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDV--LISIDTWKSQVAEAALAAGADLV 109 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCC--EEEEECSCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCc--eEEEeCCCHHHHHHHHHcCCCEE
Confidence 44455544433 478888887533 23221 1122345566666665 32 57788999999999999865444
Q ss_pred EeeccCcCCCCccccHHHHHHHhCCcEEEcc
Q 040616 154 VRLEWSLRSRDVEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 154 ~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~ 184 (208)
|=+ |-... +.++++.++++|.+++.+.
T Consensus 110 NDV--sg~~~--d~~m~~v~a~~~~~vvlmh 136 (314)
T 2vef_A 110 NDI--TGLMG--DEKMPHVVAEARAQVVIMF 136 (314)
T ss_dssp EET--TTTCS--CTTHHHHHHHHTCEEEEEC
T ss_pred EEC--CCCCC--ChHHHHHHHHcCCCEEEEe
Confidence 333 33322 3489999999999999874
No 165
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=49.55 E-value=22 Score=26.95 Aligned_cols=70 Identities=14% Similarity=0.129 Sum_probs=42.7
Q ss_pred HHHHH-HHHHHcCCcceEeeCcccHHHHHHHhhcCC-ccEEeecc--Cc----------CCCC-----ccccHHHHHHHh
Q 040616 116 TIGEL-KRLVEEGKIKHIDLSEASASTIRRAHTIHP-ITVVRLEW--SL----------RSRD-----VEEEIVPTCREL 176 (208)
Q Consensus 116 ~~~~l-~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~q~~~--~~----------~~~~-----~~~~~l~~~~~~ 176 (208)
..+.+ +.+++.|.-..+=+++|+.+.+.++.+..| +.+..+.. ++ .... ...++++.++++
T Consensus 116 ~~~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (238)
T 3no3_A 116 AARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVL 195 (238)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHT
T ss_pred HHHHHHHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHC
Confidence 34433 444456777888899999988887776533 11211110 00 0000 124789999999
Q ss_pred CCcEEEccc
Q 040616 177 GIGIVAYSL 185 (208)
Q Consensus 177 gi~v~a~~p 185 (208)
|+.|.+|.+
T Consensus 196 G~~v~~WTV 204 (238)
T 3no3_A 196 GMTSNVWTV 204 (238)
T ss_dssp TCEEEEECC
T ss_pred CCEEEEECC
Confidence 999999975
No 166
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=49.26 E-value=65 Score=26.22 Aligned_cols=142 Identities=6% Similarity=-0.077 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHCCCCeEeCCCCCCC-Cchhhh-------cce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHc
Q 040616 24 SCMIALIHHAIDSGITVLDTSNVYGP-HTNEIL-------LAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCL 94 (208)
Q Consensus 24 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~e~~-------~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 94 (208)
++..+....+.+.|++.|..--.-++ ....+. +|. +-|..... ..++.+...+-++. |+.+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~d~~l~vDan---------~~~~~~~a~~~~~~-l~~~ 210 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDAN---------QSYDAAAAFKWERY-FSEW 210 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECT---------TCCCHHHHHTTHHH-HTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCCCCEEEEECC---------CCCCHHHHHHHHHH-Hhhc
Confidence 55667778888999998764211010 011122 222 33333332 13455444333322 3433
Q ss_pred CCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHH
Q 040616 95 DVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPT 172 (208)
Q Consensus 95 ~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~ 172 (208)
-++.++..|-+. +.++.+.+++++-.|- +.|=+-++.+.++++++....+++|+..+..-.- .-..+...
T Consensus 211 ----~~i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~ 282 (382)
T 2gdq_A 211 ----TNIGWLEEPLPF----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQL 282 (382)
T ss_dssp ----SCEEEEECCSCS----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHH
T ss_pred ----cCCeEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHH
Confidence 055567776432 2366777777765553 3333557889999999988899999987764321 12478999
Q ss_pred HHHhCCcEEEc
Q 040616 173 CRELGIGIVAY 183 (208)
Q Consensus 173 ~~~~gi~v~a~ 183 (208)
|+++|+.++..
T Consensus 283 A~~~g~~~~~~ 293 (382)
T 2gdq_A 283 ARYFGVRASAH 293 (382)
T ss_dssp HHHHTCEECCC
T ss_pred HHHcCCEEeec
Confidence 99999998877
No 167
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=49.09 E-value=61 Score=26.73 Aligned_cols=145 Identities=9% Similarity=-0.011 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCC--CCCC--Cc------hh---h-------hcce-EEEEeecceecCCCCccCCCCh
Q 040616 22 PESCMIALIHHAIDSGITVLDTSN--VYGP--HT------NE---I-------LLAR-VKLTTKFGIRYEDGKYSYCGDP 80 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~--~Yg~--g~------~e---~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~ 80 (208)
+.++..+..+.+++.|++.|-.-. .|.. |. -+ + .+|. +-|..... ..++.
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan---------~~~~~ 221 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTH---------GQFTV 221 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCC---------SCBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCC---------CCcCH
Confidence 556777778888899999887521 1110 00 00 1 1222 34443432 13444
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccC
Q 040616 81 AYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWS 159 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~ 159 (208)
+...+ +-+.|+.++++ ++..|-+.. .++.+.+++++-.|- +.|=+-++.+.++++++....+++|+..+
T Consensus 222 ~~A~~-~~~~l~~~~i~-----~iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 291 (404)
T 4e5t_A 222 SGAKR-LARRLEAYDPL-----WFEEPIPPE----KPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLG 291 (404)
T ss_dssp HHHHH-HHHHHGGGCCS-----EEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTT
T ss_pred HHHHH-HHHHHhhcCCc-----EEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCcc
Confidence 44433 22455666544 445563322 356677777765553 33445578889999999888999999877
Q ss_pred cCCCC-ccccHHHHHHHhCCcEEEccc
Q 040616 160 LRSRD-VEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 160 ~~~~~-~~~~~l~~~~~~gi~v~a~~p 185 (208)
..--- .-..+...|+++|+.+...+.
T Consensus 292 ~~GGit~~~~ia~~A~~~gi~~~~h~~ 318 (404)
T 4e5t_A 292 RVGGLLEAKKIAAMAECHSAQIAPHLY 318 (404)
T ss_dssp TSSCHHHHHHHHHHHHHTTCEECCCCS
T ss_pred ccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 65321 133789999999999876653
No 168
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=49.05 E-value=14 Score=30.69 Aligned_cols=85 Identities=12% Similarity=0.033 Sum_probs=58.1
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHh
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCREL 176 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~ 176 (208)
.+++++-.|-+. +-++.+.+|+++-.+ -+.|=+-++...+.++++....+++|+..+-.-.- .-..+...|+++
T Consensus 247 ~~i~~iEeP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~ 322 (421)
T 4hnl_A 247 YQLFFLEDILPP----DQSHWLTQLRSQSATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAM 322 (421)
T ss_dssp GCCSEEECCSCG----GGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHT
T ss_pred hhhcccccCCcc----cchHHHHHHHhcCCCCeecCcceehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHC
Confidence 445556555332 235667777766544 34555667888899999888889999887765321 123788999999
Q ss_pred CCcEEEcccCc
Q 040616 177 GIGIVAYSLLG 187 (208)
Q Consensus 177 gi~v~a~~pl~ 187 (208)
|+.+...++..
T Consensus 323 gi~v~~h~~~~ 333 (421)
T 4hnl_A 323 GVRIAWHTPSD 333 (421)
T ss_dssp TCEECCCCCSS
T ss_pred CCeEEEeCCcc
Confidence 99998776653
No 169
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=48.14 E-value=22 Score=29.56 Aligned_cols=99 Identities=5% Similarity=-0.114 Sum_probs=63.8
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEee
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
++.+...+- -+.|+.++++ ++..|-+.. .++.+.+++++-.|- +.|=+-++.+.++++++....+++|+
T Consensus 231 ~~~~~A~~~-~~~L~~~~i~-----~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~ 300 (418)
T 3r4e_A 231 YTPQEAANL-GKMLEPYQLF-----WLEDCTPAE----NQEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQLIDYIRA 300 (418)
T ss_dssp SCHHHHHHH-HHHHGGGCCS-----EEESCSCCS----SGGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred CCHHHHHHH-HHHHHhhCCC-----EEECCCCcc----CHHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcCCCCeEec
Confidence 444444332 2345555544 445664322 245566777665553 33345577888999998888999999
Q ss_pred ccCcCCC-CccccHHHHHHHhCCcEEEcccC
Q 040616 157 EWSLRSR-DVEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 157 ~~~~~~~-~~~~~~l~~~~~~gi~v~a~~pl 186 (208)
..+..-. ..-..+...|+++|+.+...+++
T Consensus 301 k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 301 TVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp CTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8776532 11347899999999999988875
No 170
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=48.11 E-value=25 Score=29.34 Aligned_cols=99 Identities=8% Similarity=-0.083 Sum_probs=63.5
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEee
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
++.+...+-+ +.|+.++++ ++..|-+.. .++.+.+++++-.|- +.|=+-++.+.++++++....+++|+
T Consensus 237 ~~~~~A~~~~-~~L~~~~i~-----~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~ 306 (424)
T 3v3w_A 237 LTPIEAARLG-KALEPYHLF-----WMEDAVPAE----NQESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQWIDYIRT 306 (424)
T ss_dssp CCHHHHHHHH-HHHGGGCCS-----EEECCSCCS----STTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred CCHHHHHHHH-HHHHhcCCC-----EEECCCChH----hHHHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCCCCeEee
Confidence 4544443322 345555544 445664322 245566777665553 33445577888999998888999999
Q ss_pred ccCcCCC-CccccHHHHHHHhCCcEEEcccC
Q 040616 157 EWSLRSR-DVEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 157 ~~~~~~~-~~~~~~l~~~~~~gi~v~a~~pl 186 (208)
..+..-. ..-..+...|+++|+.+...++.
T Consensus 307 k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 307 TIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp CTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred cchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 8776532 11347999999999999988875
No 171
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=47.69 E-value=77 Score=22.94 Aligned_cols=89 Identities=19% Similarity=0.097 Sum_probs=51.0
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCc-ccHHHHHHHhhcCCccEEeec
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSE-ASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~ 157 (208)
+.+...+.++ .+..-| +|++-+|...+ ...+.++.+.+.. +.-..||+++ .++++++++.+.. .+++
T Consensus 20 ~~~~~~~~~~-~~~~~G---~~~iev~~~~~--~~~~~i~~ir~~~--~~~~~ig~~~v~~~~~~~~a~~~G-ad~i--- 87 (205)
T 1wa3_A 20 SVEEAKEKAL-AVFEGG---VHLIEITFTVP--DADTVIKELSFLK--EKGAIIGAGTVTSVEQCRKAVESG-AEFI--- 87 (205)
T ss_dssp SHHHHHHHHH-HHHHTT---CCEEEEETTST--THHHHHHHTHHHH--HTTCEEEEESCCSHHHHHHHHHHT-CSEE---
T ss_pred CHHHHHHHHH-HHHHCC---CCEEEEeCCCh--hHHHHHHHHHHHC--CCCcEEEecccCCHHHHHHHHHcC-CCEE---
Confidence 4555544443 344455 55666775432 2233344433333 2223578844 7888888887753 4555
Q ss_pred cCcCCCCccccHHHHHHHhCCcEEE
Q 040616 158 WSLRSRDVEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 158 ~~~~~~~~~~~~l~~~~~~gi~v~a 182 (208)
.++... .++++.|++.|+.++.
T Consensus 88 v~~~~~---~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 88 VSPHLD---EEISQFCKEKGVFYMP 109 (205)
T ss_dssp ECSSCC---HHHHHHHHHHTCEEEC
T ss_pred EcCCCC---HHHHHHHHHcCCcEEC
Confidence 333332 4799999999999886
No 172
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=47.52 E-value=40 Score=28.39 Aligned_cols=92 Identities=11% Similarity=0.143 Sum_probs=63.7
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-Ccc
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVE 166 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 166 (208)
+.+++|. ++ +.++-.|- + .++.+.++++.-.+ -+.|=|-++...+.++++....+++|+..+..-- ..-
T Consensus 254 ~~~~~L~-~~--l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea 324 (445)
T 3va8_A 254 WVAKELE-GI--VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKS 324 (445)
T ss_dssp HHHHHTT-TT--CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-hh--cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHH
Confidence 3445554 33 66677663 1 47777788776444 3556667888889999988889999997664431 113
Q ss_pred ccHHHHHHHhCCcEEEcccCccc
Q 040616 167 EEIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 167 ~~~l~~~~~~gi~v~a~~pl~~G 189 (208)
..+...|+++|+.+...+...+|
T Consensus 325 ~kia~lA~~~gv~v~~h~~~e~~ 347 (445)
T 3va8_A 325 QTLASICATWGLRLSMHSNSHLG 347 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHHHcCCEEEEeCCcccH
Confidence 47999999999999988876443
No 173
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=47.22 E-value=96 Score=23.93 Aligned_cols=100 Identities=14% Similarity=0.127 Sum_probs=58.4
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc--CCccEEee
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI--HPITVVRL 156 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~ 156 (208)
+.+.+.+..++.+ .-|-|.||+-. .+ ...+.++-++.+...+++-.=--|.|-+++++.++++++. ...-+|-+
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~-~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdv 98 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GP-AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINST 98 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEE
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CC-CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEEC
Confidence 3444444444443 46889999876 11 1233444444444444441112467778999999999987 44434333
Q ss_pred ccCcCCCCccccHHHHHHHhCCcEEEccc
Q 040616 157 EWSLRSRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 157 ~~~~~~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
|-. ..+-+++++.++++|.+++.+..
T Consensus 99 --s~~-~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 99 --NAE-REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp --CSC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred --CCC-cccHHHHHHHHHHhCCcEEEEcC
Confidence 222 21112789999999999998765
No 174
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=47.05 E-value=1.1e+02 Score=24.42 Aligned_cols=86 Identities=14% Similarity=0.042 Sum_probs=60.7
Q ss_pred HcCCCcccEEEee-cCCC-CCCHHHHHHHHHHHHHc-CCcceEee-Cc----ccHHHHHHHhhcCC---ccEEeeccCcC
Q 040616 93 CLDVDCIDLYYQH-RIDT-KIPIEVTIGELKRLVEE-GKIKHIDL-SE----ASASTIRRAHTIHP---ITVVRLEWSLR 161 (208)
Q Consensus 93 ~L~~d~iDl~~lh-~~~~-~~~~~~~~~~l~~l~~~-G~ir~iGv-s~----~~~~~l~~~~~~~~---~~~~q~~~~~~ 161 (208)
..|.|.||+=.-- +|+. ..+.++.++.++.+++. +. -|.| -+ ++++.++++++... +-+|-+.- .
T Consensus 85 ~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~v--plsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~--~ 160 (310)
T 2h9a_B 85 EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDV--PLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATK--D 160 (310)
T ss_dssp HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSS--CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECT--T
T ss_pred HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCc--eEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCC--C
Confidence 7788999988743 3432 35677777788888776 44 3555 55 78899999988743 33444432 2
Q ss_pred CCCccccHHHHHHHhCCcEEEccc
Q 040616 162 SRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 162 ~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
. ..++++.++++|.+++.+.+
T Consensus 161 -~--~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 161 -N--YKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp -T--HHHHHHHHHHHTCEEEEECS
T ss_pred -c--cHHHHHHHHHhCCCEEEECh
Confidence 2 45899999999999999886
No 175
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=46.80 E-value=72 Score=22.33 Aligned_cols=86 Identities=15% Similarity=0.185 Sum_probs=54.9
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHCCCC----eEeCCCCCCCCchhhhcce---------EEEEeecceecCCCCc
Q 040616 8 LRCMGMFAFYGPPKPESCMIALIHHAIDSGIT----VLDTSNVYGPHTNEILLAR---------VKLTTKFGIRYEDGKY 74 (208)
Q Consensus 8 ~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~----~~DtA~~Yg~g~~e~~~g~---------~~i~tK~~~~~~~~~~ 74 (208)
|||.++ =++.++++..+.|+.++..|.. |-|....|..+.+-..+|. ..-..|+...
T Consensus 12 ~etfSy----LP~lt~eqI~kQI~YlL~qGw~p~lEf~d~~~~~r~~~~~~~~~~~~~~yyd~~YW~mWkLPmF------ 81 (140)
T 1gk8_I 12 FETFSY----LPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF------ 81 (140)
T ss_dssp CSTTTT----SSCCCHHHHHHHHHHHHHTTCEEEEEEECGGGTSCBCGGGGGCSSCCTTCCBTSSCEEESCCCT------
T ss_pred eccccc----CCCCCHHHHHHHHHHHHHCCCEeeEEeccCCcceecccccccccccCCCcCcCCeeeeCCcCCc------
Confidence 555543 2345788899999999999988 3354445653333333332 3444444322
Q ss_pred cCCCChHHHHHHHHHHHHHcCCCcccEEEe
Q 040616 75 SYCGDPAYLRAACEASLKCLDVDCIDLYYQ 104 (208)
Q Consensus 75 ~~~~~~~~i~~~~~~sL~~L~~d~iDl~~l 104 (208)
...++.++...++..++..--.||=|+=+
T Consensus 82 -g~td~~qVl~El~~C~k~~P~~YVRligf 110 (140)
T 1gk8_I 82 -GCRDPMQVLREIVACTKAFPDAYVRLVAF 110 (140)
T ss_dssp -TCCCHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred -CCCCHHHHHHHHHHHHHHCCCCeEEEEEE
Confidence 25678899999999998887777766433
No 176
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=46.74 E-value=1.2e+02 Score=25.02 Aligned_cols=95 Identities=11% Similarity=0.005 Sum_probs=63.1
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeC-cccHHHHHHHhhcCCccEEee
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLS-EASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs-~~~~~~l~~~~~~~~~~~~q~ 156 (208)
+++...+.+.+.|+. .++.++-.|-+..+ ++.+.++.++-.|- +.|=+ ..+...+.++++....+++|+
T Consensus 268 ~~~~ai~~~~~~l~~-----~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 338 (427)
T 2pa6_A 268 TREELLDYYKALVDE-----YPIVSIEDPFHEED----FEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLL 338 (427)
T ss_dssp CHHHHHHHHHHHHHH-----SCEEEEECCSCTTC----HHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHHhh-----CCCcEEEcCCChhh----HHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEE
Confidence 455555555555554 46888888855433 56666777665543 22223 234889999998888999999
Q ss_pred ccCcCCCC-ccccHHHHHHHhCCcEEE
Q 040616 157 EWSLRSRD-VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 157 ~~~~~~~~-~~~~~l~~~~~~gi~v~a 182 (208)
..+-.-.- .-..+...|+++|+.++.
T Consensus 339 k~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 339 KVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp CHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred cccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 77754321 123789999999999876
No 177
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=46.29 E-value=35 Score=28.12 Aligned_cols=99 Identities=9% Similarity=-0.009 Sum_probs=64.0
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEee
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
++.+...+-+ +.|+.++++ ++..|-+.. .++.+.++++.-.|- +.|=+-++.+.++++++....+++|+
T Consensus 212 ~~~~~A~~~~-~~L~~~~i~-----~iEqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 281 (401)
T 3sbf_A 212 LFPNQAIQFA-KEVEQYKPY-----FIEDILPPN----QTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANRRIDFIRC 281 (401)
T ss_dssp SCHHHHHHHH-HHHGGGCCS-----CEECSSCTT----CGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHH-HHHHhcCCC-----EEECCCChh----HHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcCCCCEEec
Confidence 4444433322 345555544 445554322 245667777664442 34445678999999999988999999
Q ss_pred ccCcCCCC-ccccHHHHHHHhCCcEEEcccC
Q 040616 157 EWSLRSRD-VEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 157 ~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl 186 (208)
..+..-.- .-..+...|+++|+.+...++.
T Consensus 282 k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 282 HVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp CGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 87765321 1237899999999999887773
No 178
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3
Probab=45.65 E-value=64 Score=27.81 Aligned_cols=93 Identities=10% Similarity=0.059 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEeecCCCCCC----HHHHHHHHHHHHHcCCcceEeeCcccHHHH--HHHhhcCCccE
Q 040616 80 PAYLRAACEASLKCLDVDCIDLYYQHRIDTKIP----IEVTIGELKRLVEEGKIKHIDLSEASASTI--RRAHTIHPITV 153 (208)
Q Consensus 80 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~----~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l--~~~~~~~~~~~ 153 (208)
.+.+++.+++..++-++|++=++...+-++..+ ..+++++|++..+++.-. -++..+ ..++...-+-+
T Consensus 224 ve~ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~L~~ai~~~~~e------isaS~~YA~AAl~aG~~FI 297 (537)
T 1vko_A 224 LEHIRADIRKFKQEHELECVIVLWTANTERYTDVRQGLNATADEIMESIRVNEDE------VSPSNIFAVASILEGAHYI 297 (537)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEECSCCCCCCCCCTTTTSSHHHHHHHHHTTCSS------CCHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeCCCCcCCCCCccccccCHHHHHHHHhcCCcc------CChHHHHHHHHHhcCCcee
Confidence 456778888888888888866665555433332 345788888888876522 233332 22222222223
Q ss_pred EeeccCcCCCCccccHHHHHHHhCCcEEE
Q 040616 154 VRLEWSLRSRDVEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 154 ~q~~~~~~~~~~~~~~l~~~~~~gi~v~a 182 (208)
+ ..|-... ..++.+.++++|+.+.+
T Consensus 298 N---~sP~~~~-~P~~~elae~~gvpI~G 322 (537)
T 1vko_A 298 N---GSPQNTL-VPGLIELAERHKVFVGG 322 (537)
T ss_dssp E---CSSSCCC-CHHHHHHHHHHTCCEEC
T ss_pred e---cCCcccC-CHHHHHHHHHhCCceec
Confidence 3 2332221 24677777777777654
No 179
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=45.38 E-value=46 Score=27.54 Aligned_cols=69 Identities=6% Similarity=-0.059 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcc
Q 040616 116 TIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 116 ~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~ 184 (208)
.++.+.++++.-.|- +.|=+-++.+.++++++....+++|+..+..--..-..+...|+++|+.+...+
T Consensus 250 d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~GGit~~~~ia~~A~~~gi~~~~h~ 319 (409)
T 3go2_A 250 SPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVAIVDTIWNGVWQSMKIAAFADAHDINVAPHN 319 (409)
T ss_dssp CHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEEECHHHHCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEeCCCCCCHHHHHHHHHHHHHcCCEEeecC
Confidence 356677787765553 334455788899999999889999998765111112378999999999998754
No 180
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=44.98 E-value=48 Score=27.85 Aligned_cols=91 Identities=11% Similarity=0.166 Sum_probs=62.5
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-Ccc
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVE 166 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 166 (208)
+.+++|. + + +.++-.|-+ .++.+.++++.-.| -+.|=+-++..++.++++....+++|+..+..-- ..-
T Consensus 256 ~~~~~L~-~-~-l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea 326 (445)
T 3vdg_A 256 KVAAGLE-G-V-LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRS 326 (445)
T ss_dssp HHHHHTT-T-T-CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-h-H-HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHH
Confidence 3445553 3 3 677777732 25667777765444 3556666788889999988889999987665432 113
Q ss_pred ccHHHHHHHhCCcEEEcccCcc
Q 040616 167 EEIVPTCRELGIGIVAYSLLGR 188 (208)
Q Consensus 167 ~~~l~~~~~~gi~v~a~~pl~~ 188 (208)
..+...|+++|+.+...+....
T Consensus 327 ~kia~lA~~~gv~v~~h~~~e~ 348 (445)
T 3vdg_A 327 RLLAGICDTFGLGLSMHSNSHL 348 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCC
T ss_pred HHHHHHHHHcCCEEEEeCCcch
Confidence 3799999999999998876543
No 181
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=44.87 E-value=92 Score=23.05 Aligned_cols=146 Identities=16% Similarity=0.091 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcceEEEEeecceecCCCCccCCCChHHHHH------HHHHHHHHcC-C
Q 040616 24 SCMIALIHHAIDSGITVLDTSNVYGPHTNEILLARVKLTTKFGIRYEDGKYSYCGDPAYLRA------ACEASLKCLD-V 96 (208)
Q Consensus 24 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~~~i~tK~~~~~~~~~~~~~~~~~~i~~------~~~~sL~~L~-~ 96 (208)
++....++.|++.|...|.+--.- ..-|.+++.-=-... .....+.+.+++++ .+++.|+.+. -
T Consensus 22 ENTl~Af~~A~~~G~d~iE~DV~l------T~Dg~lVv~HD~~l~---~g~v~~~t~~eL~~l~~~iptL~evl~~~~~~ 92 (224)
T 1vd6_A 22 ENTLESFRLALEAGLDGVELDVWP------TRDGVFAVRHDPDTP---LGPVFQVDYADLKAQEPDLPRLEEVLALKEAF 92 (224)
T ss_dssp TTSHHHHHHHHHTTCSEEEEEEEE------CTTSCEEECSCSEET---TEEGGGSCHHHHHHHSTTCCBHHHHHGGGGTC
T ss_pred cchHHHHHHHHHcCCCEEEEEeeE------ecCCcEEEECCCccC---CCChhhCCHHHHHhcCCCCCCHHHHHHhhhcc
Confidence 456778999999999987631110 111222221000000 00123567777765 4788888775 1
Q ss_pred CcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCC-c-------------------cEEee
Q 040616 97 DCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHP-I-------------------TVVRL 156 (208)
Q Consensus 97 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~-------------------~~~q~ 156 (208)
..+ .+.+.--.......+..+.+.++.++ -..+=+++|+++.+..+.+..| + +.+..
T Consensus 93 ~~~-~l~iEiK~~~~~~~~~~~~v~~~l~~--~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~i~~ 169 (224)
T 1vd6_A 93 PQA-VFNVELKSFPGLGEEAARRLAALLRG--REGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHSALLPCLGVEAVHP 169 (224)
T ss_dssp TTC-EEEEEECCCTTSHHHHHHHHHHHTTT--CSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCCGGGGGGSCCSEEEE
T ss_pred CCc-eEEEEECCCCCccHHHHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHCCCCCEEEEeccccHHHHHHcCCcEEec
Confidence 111 12333212222223344555555554 4556688999888777765422 1 11111
Q ss_pred ccCcCCCCccccHHHHHHHhCCcEEEccc
Q 040616 157 EWSLRSRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 157 ~~~~~~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
.++. ...++++.++++|+.+.+|.+
T Consensus 170 ~~~~----~~~~~v~~~~~~G~~v~~wtv 194 (224)
T 1vd6_A 170 HHAL----VTEEAVAGWRKRGLFVVAWTV 194 (224)
T ss_dssp BGGG----CCHHHHHHHHHTTCEEEEECC
T ss_pred Cccc----CCHHHHHHHHHCCCEEEEEeC
Confidence 2221 234799999999999999985
No 182
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=44.78 E-value=14 Score=31.25 Aligned_cols=86 Identities=6% Similarity=-0.009 Sum_probs=55.6
Q ss_pred EeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhCCcEE
Q 040616 103 YQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIV 181 (208)
Q Consensus 103 ~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~ 181 (208)
++-.|-+..+.....+.+.++++.-.+ -+.|-+-++...+.++++....+++|......--..-..+...|+.+|+.+.
T Consensus 276 wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~d~~~GGit~~~kia~lA~~~gi~v~ 355 (464)
T 4g8t_A 276 YAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLADPHFWTMQGSIRVAQMCHEWGLTWG 355 (464)
T ss_dssp CEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHHHHHHHHHHTCCCB
T ss_pred eeecCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEeccccccchHHHHHHHHHHHHcCCEEE
Confidence 444443322222334556666655444 4677778899999999988888888876332211123478999999999998
Q ss_pred EcccCcc
Q 040616 182 AYSLLGR 188 (208)
Q Consensus 182 a~~pl~~ 188 (208)
..+-..+
T Consensus 356 ~h~~~~~ 362 (464)
T 4g8t_A 356 SHSNNHF 362 (464)
T ss_dssp CCCCSCC
T ss_pred EcCCccc
Confidence 7765443
No 183
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=44.75 E-value=44 Score=25.65 Aligned_cols=65 Identities=14% Similarity=0.270 Sum_probs=39.7
Q ss_pred HHHHHcCCcceEeeCcccHHHHHHHhhcCC-ccEEeec-------------------cCcCCCCccccHHHHHHHhCCcE
Q 040616 121 KRLVEEGKIKHIDLSEASASTIRRAHTIHP-ITVVRLE-------------------WSLRSRDVEEEIVPTCRELGIGI 180 (208)
Q Consensus 121 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~q~~-------------------~~~~~~~~~~~~l~~~~~~gi~v 180 (208)
+.+++.|.-+.+=+++|+++.+..+.+..| +.+..+. +++.......++++.++++|+.|
T Consensus 160 ~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~Gl~v 239 (272)
T 3ch0_A 160 AEIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLSYLVETKGTLKKQLEKLSFTPAVYSPDVTLVSKKDIDAAHKLGMRV 239 (272)
T ss_dssp HHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSEEEEEECSSCCHHHHHTTSSSCCSEEEEBGGGCCHHHHHHHHHTTCEE
T ss_pred HHHHHcCCCCcEEEEeCCHHHHHHHHHHCCCCcEEEEecCCCCHHHHHHHcCCCCcEEccchhhcCHHHHHHHHHcCCEE
Confidence 344455777788899999988877765422 1111110 01111112347889999999999
Q ss_pred EEccc
Q 040616 181 VAYSL 185 (208)
Q Consensus 181 ~a~~p 185 (208)
.+|..
T Consensus 240 ~~wTv 244 (272)
T 3ch0_A 240 IPWTV 244 (272)
T ss_dssp CCBCC
T ss_pred EEecc
Confidence 99885
No 184
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=44.75 E-value=33 Score=26.12 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=36.8
Q ss_pred HcCCcceEeeCcccHHHHHHHhhcCC----------------------ccEEeeccCcCCCCccccHHHHHHHhCCcEEE
Q 040616 125 EEGKIKHIDLSEASASTIRRAHTIHP----------------------ITVVRLEWSLRSRDVEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 125 ~~G~ir~iGvs~~~~~~l~~~~~~~~----------------------~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a 182 (208)
+.|.-..+=++.|+++.+..+.+..| ++.+...++.+ ...++++.++++|+.|.+
T Consensus 123 ~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~v~~~~~~G~~v~~ 199 (248)
T 1zcc_A 123 HLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKSPSLVGAVHHASIIEITPAQM---RRPGIIEASRKAGLEIMV 199 (248)
T ss_dssp HHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSSTHHHHHTTCCSEEEECHHHH---HSHHHHHHHHHHTCEEEE
T ss_pred HhCCCCCEEEEECCHHHHHHHHHHCCCCcEEEEecCCccHHHHHHHcCCCEEEecHHHh---CCHHHHHHHHHCCCEEEE
Confidence 34666667788888887776655422 11222222222 034788999999999999
Q ss_pred ccc
Q 040616 183 YSL 185 (208)
Q Consensus 183 ~~p 185 (208)
|.+
T Consensus 200 wTv 202 (248)
T 1zcc_A 200 YYG 202 (248)
T ss_dssp ECC
T ss_pred ECC
Confidence 985
No 185
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=44.73 E-value=44 Score=27.45 Aligned_cols=98 Identities=10% Similarity=0.011 Sum_probs=61.9
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
++.+...+ +-+.|+.++++ ++..|-+..+ .++.+.+++++-.+ -+.|=+-++.+++.++++....+++|+
T Consensus 210 ~~~~~A~~-~~~~L~~~~i~-----~iEeP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 280 (392)
T 3ddm_A 210 WDLPRARQ-MAQRLGPAQLD-----WLEEPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQP 280 (392)
T ss_dssp CCHHHHHH-HHHHHGGGCCS-----EEECCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECC
T ss_pred CCHHHHHH-HHHHHHHhCCC-----EEECCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 44444332 22445555544 4455533222 15677777776444 344556688999999998888999998
Q ss_pred ccCcCCC-CccccHHHHHHHhCCcEEEcc
Q 040616 157 EWSLRSR-DVEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 157 ~~~~~~~-~~~~~~l~~~~~~gi~v~a~~ 184 (208)
..+-.-. ..-..+...|+++|+.+...+
T Consensus 281 k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 281 DLAKWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp CTTTTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred CcchhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 7665421 113379999999999997544
No 186
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=44.68 E-value=35 Score=28.55 Aligned_cols=145 Identities=5% Similarity=-0.057 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCC--CC----CCCCc-------hhh-------hcce-EEEEeecceecCCCCccCCCCh
Q 040616 22 PESCMIALIHHAIDSGITVLDTS--NV----YGPHT-------NEI-------LLAR-VKLTTKFGIRYEDGKYSYCGDP 80 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA--~~----Yg~g~-------~e~-------~~g~-~~i~tK~~~~~~~~~~~~~~~~ 80 (208)
+.++..+..+.+++.|++.|-.- .. +|... ..+ .+|. +-|..... ...++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan---------~~~t~ 216 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTH---------GQFTT 216 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCC---------SCBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCC---------CCCCH
Confidence 56778888889999999988642 11 12111 011 1222 33433332 13444
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccC
Q 040616 81 AYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWS 159 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~ 159 (208)
+...+ +-+.|+.+++ .++..|-+.. .++.+.++++.-.| -+.|=+-++.+.++++++....+++|+..+
T Consensus 217 ~~A~~-~~~~Le~~~i-----~~iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~ 286 (433)
T 3rcy_A 217 AGAIR-LGQAIEPYSP-----LWYEEPVPPD----NVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALG 286 (433)
T ss_dssp HHHHH-HHHHHGGGCC-----SEEECCSCTT----CHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred HHHHH-HHHHhhhcCC-----CEEECCCChh----hHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCch
Confidence 44333 2234555554 4556664322 36677778776555 344556688999999999888999998776
Q ss_pred cCCC-CccccHHHHHHHhCCcEEEccc
Q 040616 160 LRSR-DVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 160 ~~~~-~~~~~~l~~~~~~gi~v~a~~p 185 (208)
-.-. ..-..+...|+++|+.+...++
T Consensus 287 ~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 287 RAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred hcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 5421 1134789999999999988764
No 187
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=44.39 E-value=47 Score=27.59 Aligned_cols=82 Identities=10% Similarity=0.052 Sum_probs=53.9
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCC--c-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHH
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGK--I-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCR 174 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~--i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~ 174 (208)
.++.++-.|-+.. -|+.+.++.++-. | -+.|=+-++...+.++++.. .+++|+..+..-.- .-..+...|+
T Consensus 248 ~~i~~iEqPl~~~----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d~i~ik~~~~GGitea~~ia~lA~ 322 (415)
T 2p3z_A 248 FNLKWIEECLPPQ----QYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-IDIMQPDVGWCGGLTTLVEIAALAK 322 (415)
T ss_dssp GTCCEEECCSCTT----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CSEECCCHHHHTCHHHHHHHHHHHH
T ss_pred cCCceEeCCCCcc----hHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHH
Confidence 3555666664332 2556666665433 2 23344557888999998888 99999977754321 1247899999
Q ss_pred HhCCcEEEccc
Q 040616 175 ELGIGIVAYSL 185 (208)
Q Consensus 175 ~~gi~v~a~~p 185 (208)
++|+.++..+.
T Consensus 323 ~~gi~v~~h~~ 333 (415)
T 2p3z_A 323 SRGQLVVPHGS 333 (415)
T ss_dssp HTTCCBCCCCC
T ss_pred HcCCEEEecCh
Confidence 99999887654
No 188
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=44.05 E-value=99 Score=23.16 Aligned_cols=96 Identities=13% Similarity=0.087 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHCCCCeEeCCC---------CCCCCchhhhcce--EEEEeecceec---CCCCccCCCChHHHHHHHHH
Q 040616 24 SCMIALIHHAIDSGITVLDTSN---------VYGPHTNEILLAR--VKLTTKFGIRY---EDGKYSYCGDPAYLRAACEA 89 (208)
Q Consensus 24 ~~~~~~l~~A~~~Gi~~~DtA~---------~Yg~g~~e~~~g~--~~i~tK~~~~~---~~~~~~~~~~~~~i~~~~~~ 89 (208)
......+++-+..|..+.-+.. .||.+ -.+-|+ ++++|-.++.. ..+.+-...+.+.+...++.
T Consensus 100 ~~lK~~iD~v~~~g~af~y~~~g~~~~~p~~~yG~~--glL~gKk~~li~T~G~p~~~y~~~g~~~~g~~~~~~l~p~~~ 177 (218)
T 3rpe_A 100 WILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSG--GLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHK 177 (218)
T ss_dssp HHHHHHHHHHHHHTBTTTBCCCSCCSTTTTSCTTCC--BSCTTCEEEEEEECSSCTHHHHCTTSTTTTCHHHHHTHHHHH
T ss_pred HHHHHHHHHHHhcCcceeeccccccccccccccCCc--cCCCCCEEEEEEcCCCChHhhcccccccccCCHHHHHHHHHH
Confidence 5578888888888876433321 26622 123455 55555554421 11111112234445556789
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHH
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELK 121 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~ 121 (208)
.++-+|.+++..+.++.......+++..+.+.
T Consensus 178 ~l~f~G~~~l~~~~~~g~~~~~~~~~~~~~~~ 209 (218)
T 3rpe_A 178 ANQFLGMKPLPTFMCNDVIKQPDIEGDIARYR 209 (218)
T ss_dssp HHHHTTCEECCCEEECSTTTSCCHHHHHHHHH
T ss_pred HHHhCCCEEeceEEEeCCCChHHHHHHHHHHH
Confidence 99999999999999998766555555444443
No 189
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=43.91 E-value=42 Score=26.60 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=62.2
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEee-cCCC-CCCHH----HHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCcc
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQH-RIDT-KIPIE----VTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPIT 152 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~-~~~~~----~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 152 (208)
+.+.+.+..++ +-.-|-|.||+=.-- +|.. ..+.+ .+...++.+++++. -|.|-+++++.++++++....-
T Consensus 44 ~~~~a~~~a~~-~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa~i 120 (294)
T 2y5s_A 44 ARDDALRRAER-MIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGADL 120 (294)
T ss_dssp CTTHHHHHHHH-HHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCCCE
Confidence 34444443332 334578899987633 3421 22333 34555566655532 4778899999999999986644
Q ss_pred EEeeccCcCCCCccccHHHHHHHhCCcEEEccc
Q 040616 153 VVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 153 ~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
+|=+. -.. ..++++.++++|.+++.+.-
T Consensus 121 INdVs--g~~---d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 121 INDIW--GFR---QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp EEETT--TTC---STTHHHHHSSSSCEEEEECC
T ss_pred EEECC--CCC---chHHHHHHHHhCCCEEEECC
Confidence 44432 222 34899999999999999764
No 190
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=43.69 E-value=36 Score=27.99 Aligned_cols=147 Identities=12% Similarity=-0.000 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHHC---CCCeEeCCCCCCC-Cchh-------hhcce-EEEEeecceecCCCCccCCCChHHHHHHHHH
Q 040616 22 PESCMIALIHHAIDS---GITVLDTSNVYGP-HTNE-------ILLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEA 89 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~---Gi~~~DtA~~Yg~-g~~e-------~~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (208)
+.++..+.++.+++. |++.|-.--...+ .... +.+|. +-|..... ..++.+...+- -+
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN---------~~~~~~~A~~~-~~ 240 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFN---------QGLDMAEAMHR-TR 240 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECT---------TCCCHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECC---------CCCCHHHHHHH-HH
Confidence 456677777888888 9998753211100 0011 11222 34443332 13444443222 22
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-Cccc
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEE 167 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~ 167 (208)
.|+.+ ++.++..|-+.. .++.+.+++++-.| -+.|=+-++...+.++++...++++|+..+..-. ..-.
T Consensus 241 ~l~~~-----~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~ 311 (390)
T 3ugv_A 241 QIDDL-----GLEWIEEPVVYD----NFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWM 311 (390)
T ss_dssp HHTTS-----CCSEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHH
T ss_pred HHHhh-----CCCEEECCCCcc----cHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHH
Confidence 33444 444556664432 35666777765444 3445566889999999998889999987765421 1123
Q ss_pred cHHHHHHHhCCcEEEcccCc
Q 040616 168 EIVPTCRELGIGIVAYSLLG 187 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~pl~ 187 (208)
.+...|+++|+.+...+.+.
T Consensus 312 ~i~~~A~~~gi~~~~h~~~~ 331 (390)
T 3ugv_A 312 RAAGVAGAWGIPMSTHLYPE 331 (390)
T ss_dssp HHHHHHHHHTCCBCCBSCHH
T ss_pred HHHHHHHHcCCEEeecCHHH
Confidence 78999999999998766543
No 191
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=43.45 E-value=99 Score=22.99 Aligned_cols=87 Identities=21% Similarity=0.179 Sum_probs=53.0
Q ss_pred EEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcC-CccEEeeccCcCCCC-----ccccHHHHHHH
Q 040616 102 YYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIH-PITVVRLEWSLRSRD-----VEEEIVPTCRE 175 (208)
Q Consensus 102 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~-~~~~~q~~~~~~~~~-----~~~~~l~~~~~ 175 (208)
+++..|.+ ...+++++...+--++.-|++|=|++.+.+...++++.. .+.++-+.++.-... ..++..+..++
T Consensus 18 ~YF~~~G~-eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~ 96 (201)
T 1vp8_A 18 VYFNKPGR-ENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRK 96 (201)
T ss_dssp EEESSCSG-GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHH
T ss_pred EEecCCCc-ccHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHh
Confidence 34444433 235666665544444545999999887776666665543 233443444433332 35589999999
Q ss_pred hCCcEEEcccCccc
Q 040616 176 LGIGIVAYSLLGRG 189 (208)
Q Consensus 176 ~gi~v~a~~pl~~G 189 (208)
.|+.|+..+=+-+|
T Consensus 97 ~G~~V~t~tH~lsg 110 (201)
T 1vp8_A 97 RGAKIVRQSHILSG 110 (201)
T ss_dssp TTCEEEECCCTTTT
T ss_pred CCCEEEEEeccccc
Confidence 99999976655544
No 192
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=43.17 E-value=38 Score=28.39 Aligned_cols=82 Identities=12% Similarity=-0.018 Sum_probs=57.2
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHhC
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRELG 177 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~g 177 (208)
++.++..|-+. +.++.+.+++++-.| -+.|=+-++.+.+.++++....+++|+..+..-.- .-..+...|+++|
T Consensus 267 ~i~~iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~g 342 (440)
T 3t6c_A 267 QLFFLEDPVAP----ENTEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNG 342 (440)
T ss_dssp CCSEEECSSCG----GGGGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTT
T ss_pred CCCEEECCCCh----hhHHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcC
Confidence 44455555332 235667777776444 34455668899999999988899999987765321 1237899999999
Q ss_pred CcEEEccc
Q 040616 178 IGIVAYSL 185 (208)
Q Consensus 178 i~v~a~~p 185 (208)
+.+...+.
T Consensus 343 i~~~~h~~ 350 (440)
T 3t6c_A 343 VRTAWHSP 350 (440)
T ss_dssp CEECCCCS
T ss_pred CEEEeccC
Confidence 99887666
No 193
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=43.11 E-value=1e+02 Score=23.01 Aligned_cols=88 Identities=17% Similarity=0.163 Sum_probs=55.6
Q ss_pred EEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-----CccccHHHHHHH
Q 040616 101 LYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-----DVEEEIVPTCRE 175 (208)
Q Consensus 101 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-----~~~~~~l~~~~~ 175 (208)
++++..|... ..+++++...+--++.-|++|=|++.+.+...++++...-.++-+.++.-.. ...++..+..++
T Consensus 25 i~YF~~~G~e-NT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~~ 103 (206)
T 1t57_A 25 ICYFEEPGKE-NTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALLE 103 (206)
T ss_dssp EEEESSCSGG-GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHHH
T ss_pred EEEecCCCcc-cHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHHh
Confidence 4566665442 3566666554444454599999988887777777765410333333333332 235589999999
Q ss_pred hCCcEEEcccCccc
Q 040616 176 LGIGIVAYSLLGRG 189 (208)
Q Consensus 176 ~gi~v~a~~pl~~G 189 (208)
.|+.|+..+=+-+|
T Consensus 104 ~G~~V~t~tH~lsG 117 (206)
T 1t57_A 104 RGVNVYAGSHALSG 117 (206)
T ss_dssp HTCEEECCSCTTTT
T ss_pred CCCEEEEeeccccc
Confidence 99999976655444
No 194
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=43.03 E-value=1.4e+02 Score=24.91 Aligned_cols=96 Identities=13% Similarity=-0.051 Sum_probs=62.7
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcC--Cc-ceEeeC-cccHHHHHHHhhcCCccE
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEG--KI-KHIDLS-EASASTIRRAHTIHPITV 153 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G--~i-r~iGvs-~~~~~~l~~~~~~~~~~~ 153 (208)
.+++...+-+++..+. .+++++-.|-+..+ |+.+.+|.++- .| -+.|=+ .++.+.+.++++....++
T Consensus 279 ~t~~eai~~~~~l~~~-----~~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~ 349 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNK-----YPIITIEDGMDEND----WDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANS 349 (444)
T ss_dssp ECHHHHHHHHHHHHHH-----SCEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred CCHHHHHHHHHHHHHh-----CCcEEEECCCChhh----HHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCE
Confidence 3455555444444443 46889998865443 44555555442 33 233334 578899999999888999
Q ss_pred EeeccCcCCCC-ccccHHHHHHHhCCcEEE
Q 040616 154 VRLEWSLRSRD-VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 154 ~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a 182 (208)
+|+..+-.-.- .-..+...|+++|+.++.
T Consensus 350 i~ik~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 350 ILIKVNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp EEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEcccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 99977754321 123789999999999987
No 195
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=43.01 E-value=82 Score=25.26 Aligned_cols=86 Identities=13% Similarity=0.096 Sum_probs=53.4
Q ss_pred HcCCCcccEEEee-cCCCCCCHHH----HHHHHHHHHHc--CCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCc
Q 040616 93 CLDVDCIDLYYQH-RIDTKIPIEV----TIGELKRLVEE--GKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDV 165 (208)
Q Consensus 93 ~L~~d~iDl~~lh-~~~~~~~~~~----~~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~ 165 (208)
.-|-|.||+=.-- +|....+.++ +...++.++++ +. -|.|-+++++.++++++....-+|=+ +-..
T Consensus 76 ~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~v--pISIDT~~~~VaeaAl~aGa~iINDV--sg~~--- 148 (318)
T 2vp8_A 76 ADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQ--LISVDTWRAQVAKAACAAGADLINDT--WGGV--- 148 (318)
T ss_dssp HTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTC--EEEEECSCHHHHHHHHHHTCCEEEET--TSSS---
T ss_pred HCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC--eEEEeCCCHHHHHHHHHhCCCEEEEC--CCCC---
Confidence 3478889986532 2332233333 34445666665 33 57888999999999999865433332 2222
Q ss_pred cccHHHHHHHhCCcEEEccc
Q 040616 166 EEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 166 ~~~~l~~~~~~gi~v~a~~p 185 (208)
..++++.++++|.+++.+.-
T Consensus 149 d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 149 DPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp STTHHHHHHHHTCEEEEECC
T ss_pred chHHHHHHHHhCCCEEEECC
Confidence 35899999999999999763
No 196
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=40.42 E-value=14 Score=31.65 Aligned_cols=21 Identities=19% Similarity=0.273 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHCCCCeEeCCC
Q 040616 25 CMIALIHHAIDSGITVLDTSN 45 (208)
Q Consensus 25 ~~~~~l~~A~~~Gi~~~DtA~ 45 (208)
....+++.|+++|++++|||.
T Consensus 95 ~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 95 SSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp CHHHHHHHHHHHTCEEEESSC
T ss_pred cCHHHHHHHHHcCCCEEECCC
Confidence 467899999999999999995
No 197
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=40.22 E-value=1.4e+02 Score=23.64 Aligned_cols=109 Identities=11% Similarity=-0.047 Sum_probs=57.0
Q ss_pred CChHHHHHHHH-HHHHHcCCCcccEEEeecCCCC-----CCH-------HHHHHHHHHHHHc--CCcceEeeCcc-----
Q 040616 78 GDPAYLRAACE-ASLKCLDVDCIDLYYQHRIDTK-----IPI-------EVTIGELKRLVEE--GKIKHIDLSEA----- 137 (208)
Q Consensus 78 ~~~~~i~~~~~-~sL~~L~~d~iDl~~lh~~~~~-----~~~-------~~~~~~l~~l~~~--G~ir~iGvs~~----- 137 (208)
.+...++..++ ..|+.+...-||..++-..... .+. ....+.+.++.++ +++..+|+-..
T Consensus 41 ~~~~~~~~~~~~~~l~~md~~GV~~~vl~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~rf~~~~~~p~~~~~~ 120 (350)
T 2gwg_A 41 ISDDELQASIIENQLKKMQERGSDLTVFSPRASFMAHHIGDFNVSSTWAAICNELCYRVSQLFPDNFIGAAMLPQSPGVD 120 (350)
T ss_dssp CCHHHHHHHHHTTHHHHHHHHTCCEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECCCCTTSC
T ss_pred cCHHHhhcccHHHHHHHHHHcCCeEEEEcCCchhhccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCC
Confidence 34555666554 5555553333454444322111 111 1344556666654 45555555432
Q ss_pred ---cHHHHHHHhhcCCccEEeeccCc---------CCCCccccHHHHHHHhCCcEEEcccC
Q 040616 138 ---SASTIRRAHTIHPITVVRLEWSL---------RSRDVEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 138 ---~~~~l~~~~~~~~~~~~q~~~~~---------~~~~~~~~~l~~~~~~gi~v~a~~pl 186 (208)
..++++++++...+.-+++..++ +....-..+++.|.++|+.|+....-
T Consensus 121 ~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~ 181 (350)
T 2gwg_A 121 PKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVST 181 (350)
T ss_dssp GGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCC
Confidence 23567777654445555553321 11212347999999999999986543
No 198
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=40.11 E-value=53 Score=27.00 Aligned_cols=98 Identities=10% Similarity=0.037 Sum_probs=63.1
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
++++...+- -+.|+.+++ .++-.|-+.. -++.+.++++.-.+ -+.|=+-++...+.++++....+++|+
T Consensus 210 ~~~~~A~~~-~~~l~~~~i-----~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 279 (388)
T 3tcs_A 210 YTPDRAIEV-GHMLQDHGF-----CHFEEPCPYW----ELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQP 279 (388)
T ss_dssp CCHHHHHHH-HHHHHHTTC-----CEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECC
T ss_pred cCHHHHHHH-HHHHhhcCC-----eEEECCCCcc----CHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEe
Confidence 455443332 234555544 4556664332 25566677765444 345556688899999998888899998
Q ss_pred ccCcCCC-CccccHHHHHHHhCCcEEEccc
Q 040616 157 EWSLRSR-DVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 157 ~~~~~~~-~~~~~~l~~~~~~gi~v~a~~p 185 (208)
..+-.-. ..-..+...|+++|+.+...+.
T Consensus 280 d~~~~GGit~a~kia~~A~~~gv~~~~h~~ 309 (388)
T 3tcs_A 280 DILYLGGICRTLRVVEMARAAGLPVTPHCA 309 (388)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 7664322 1134789999999999987765
No 199
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=39.92 E-value=49 Score=27.76 Aligned_cols=91 Identities=18% Similarity=0.215 Sum_probs=62.3
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-Ccc
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVE 166 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 166 (208)
+.+++|. + + +.++-.|-+ .++.|.++++.-.| -+.|-|-++..++.++++....+++|+..+-.-- ..-
T Consensus 251 ~~~~~L~-~-~-l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea 321 (441)
T 3vc5_A 251 RVGRALD-G-V-LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRS 321 (441)
T ss_dssp HHHHHTT-T-T-CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHH-H-H-HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHH
Confidence 3445554 3 3 667777732 25677777765433 3556667788889999888888999987654331 113
Q ss_pred ccHHHHHHHhCCcEEEcccCcc
Q 040616 167 EEIVPTCRELGIGIVAYSLLGR 188 (208)
Q Consensus 167 ~~~l~~~~~~gi~v~a~~pl~~ 188 (208)
..+...|+++|+.+...+....
T Consensus 322 ~kia~lA~~~gv~v~~h~~~e~ 343 (441)
T 3vc5_A 322 AHIATLCATFGIELSMHSNSHL 343 (441)
T ss_dssp HHHHHHHHHTTCEEEECCCSCC
T ss_pred HHHHHHHHHcCCEEEecCCccc
Confidence 4799999999999998877643
No 200
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=39.91 E-value=1.1e+02 Score=22.55 Aligned_cols=73 Identities=7% Similarity=-0.036 Sum_probs=45.4
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcc-------cHHHHHHHhhcCCccEEeeccCcCCCC-------
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEA-------SASTIRRAHTIHPITVVRLEWSLRSRD------- 164 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~-------~~~~l~~~~~~~~~~~~q~~~~~~~~~------- 164 (208)
.|++.+|.-+ . +....+.+. .|.-||--.. +...++.+.+.. ..+++.++.+.+.
T Consensus 76 ~di~~v~~~~----~----~~n~~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~g--v~lEIn~s~~~~~~~~~R~~ 144 (212)
T 1v77_A 76 SYLIYVESND----L----RVIRYSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKN--VALGFSLRPLLYSNPYERAN 144 (212)
T ss_dssp SSEEEEECSC----H----HHHHHHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHT--CEEEEESHHHHHSCHHHHHH
T ss_pred cEEEEEEeCC----H----HHHHHHHhC-CCCEEecccccccCCCCCHHHHHHHHHCC--eEEEEECcHHhcCCcchHHH
Confidence 8889999642 1 233446667 7888886432 234444455544 3566666665321
Q ss_pred ---ccccHHHHHHHhCCcEEE
Q 040616 165 ---VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 165 ---~~~~~l~~~~~~gi~v~a 182 (208)
.-..+++.|++.|++++.
T Consensus 145 ~~~~~~~il~l~k~~g~~ivi 165 (212)
T 1v77_A 145 LLRFMMKAWKLVEKYKVRRFL 165 (212)
T ss_dssp HHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEE
Confidence 113789999999999884
No 201
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=39.74 E-value=1.9e+02 Score=25.27 Aligned_cols=93 Identities=6% Similarity=-0.010 Sum_probs=51.2
Q ss_pred EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCC-------CCHHHHHHHHHHHHHcCCcce
Q 040616 59 VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTK-------IPIEVTIGELKRLVEEGKIKH 131 (208)
Q Consensus 59 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~ir~ 131 (208)
+.|..|+...... ....+.+... .+-+.|+..|.||+++-. .+.+.. .+....++.+.++++.=.+--
T Consensus 209 ~~v~vrls~~~~~---~~g~~~~~~~-~~a~~l~~~g~d~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPv 283 (671)
T 1ps9_A 209 FIIIYRLSMLDLV---EDGGTFAETV-ELAQAIEAAGATIINTGI-GWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPL 283 (671)
T ss_dssp SEEEEEEEEECCS---TTCCCHHHHH-HHHHHHHHHTCSEEEEEE-CBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCE
T ss_pred ceEEEEECccccC---CCCCCHHHHH-HHHHHHHhcCCCEEEcCC-CccccccccccccCCcchHHHHHHHHHHhcCceE
Confidence 6777888764310 0124454433 344667888988887531 111110 111122455566666555666
Q ss_pred EeeCcc-cHHHHHHHhhcCCccEEee
Q 040616 132 IDLSEA-SASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 132 iGvs~~-~~~~l~~~~~~~~~~~~q~ 156 (208)
+++... +++.++++++....|.+++
T Consensus 284 i~~Ggi~~~~~a~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 284 VTTNRINDPQVADDILSRGDADMVSM 309 (671)
T ss_dssp EECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred EEeCCCCCHHHHHHHHHcCCCCEEEe
Confidence 666664 7788888887766666665
No 202
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=39.67 E-value=42 Score=28.39 Aligned_cols=69 Identities=6% Similarity=-0.022 Sum_probs=50.8
Q ss_pred HHHHHHHHHcC-Cc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHhCCcEEEccc
Q 040616 117 IGELKRLVEEG-KI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 117 ~~~l~~l~~~G-~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~p 185 (208)
++.+.+++++- .+ -+.|=+-++...+.++++...++++|+..+-.--- .-..+...|+.+|+.+...++
T Consensus 256 ~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~~H~~ 327 (455)
T 3fxg_A 256 TDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVVPHAS 327 (455)
T ss_dssp GGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTTSSCHHHHHHHHHHHHTTTCCBCCCSC
T ss_pred HHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEecch
Confidence 56667777653 23 45677778889999999988899999987765321 133789999999999986654
No 203
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=39.23 E-value=1.3e+02 Score=23.55 Aligned_cols=96 Identities=9% Similarity=0.063 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHc--CCCcccEEEee-cCCC-CCCHHH----HHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEE
Q 040616 83 LRAACEASLKCL--DVDCIDLYYQH-RIDT-KIPIEV----TIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVV 154 (208)
Q Consensus 83 i~~~~~~sL~~L--~~d~iDl~~lh-~~~~-~~~~~~----~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~ 154 (208)
..+++++..+-+ |.|.||+=--- +|.. ..+.+| +...++.+++.+. .|.|-++.++.++++++.+---+|
T Consensus 29 ~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v--~iSIDT~~~~Va~~al~aGa~iIN 106 (270)
T 4hb7_A 29 VETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDV--KISVDTFRSEVAEACLKLGVDMIN 106 (270)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSS--EEEEECSCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCC--eEEEECCCHHHHHHHHHhccceec
Confidence 445555554433 77888875322 2322 123333 4556666665443 577779999999999987542222
Q ss_pred eeccCcCCCCccccHHHHHHHhCCcEEEcc
Q 040616 155 RLEWSLRSRDVEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 155 q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~ 184 (208)
..+-... +.++++.+.+.+++++.+-
T Consensus 107 --DVs~g~~--d~~m~~~va~~~~~~vlMH 132 (270)
T 4hb7_A 107 --DQWAGLY--DHRMFQIVAKYDAEIILMH 132 (270)
T ss_dssp --ETTTTSS--CTHHHHHHHHTTCEEEEEC
T ss_pred --ccccccc--chhHHHHHHHcCCCeEEec
Confidence 2222233 4589999999999999875
No 204
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=38.98 E-value=43 Score=21.67 Aligned_cols=56 Identities=11% Similarity=0.011 Sum_probs=29.3
Q ss_pred CcccEEEeecCCCCCCHHHHHHHHHHHHHcC---CcceEeeCcccHHHHHHHhhcCCccEEe
Q 040616 97 DCIDLYYQHRIDTKIPIEVTIGELKRLVEEG---KIKHIDLSEASASTIRRAHTIHPITVVR 155 (208)
Q Consensus 97 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G---~ir~iGvs~~~~~~l~~~~~~~~~~~~q 155 (208)
...|++++....+..+ .++.+..+++.. .+.-+-++..+.+.+.++.+.+..+++.
T Consensus 49 ~~~dlii~d~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~ 107 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLD---GLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLE 107 (132)
T ss_dssp TCCSEEEEESCBTTBC---HHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEEC
T ss_pred cCCCEEEEecCCCCCC---HHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhh
Confidence 3478888876543332 344555555543 3444445555545555665554444433
No 205
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=38.64 E-value=28 Score=29.01 Aligned_cols=99 Identities=6% Similarity=-0.104 Sum_probs=63.5
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEee
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
++.+...+- -+.|+.++++ ++..|-+.. .++.+.++++.-.|- +.|=+-++.+.+.++++....+++|+
T Consensus 238 ~~~~~A~~~-~~~L~~~~i~-----~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 307 (425)
T 3vcn_A 238 LTPIEAARL-GKDLEPYRLF-----WLEDSVPAE----NQAGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQLIDYLRA 307 (425)
T ss_dssp CCHHHHHHH-HHHHGGGCCS-----EEECCSCCS----STTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred CCHHHHHHH-HHHHHhcCCC-----EEECCCChh----hHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCeEec
Confidence 455444332 2345555544 445664322 245566777665553 33445578888999998888999999
Q ss_pred ccCcCCC-CccccHHHHHHHhCCcEEEcccC
Q 040616 157 EWSLRSR-DVEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 157 ~~~~~~~-~~~~~~l~~~~~~gi~v~a~~pl 186 (208)
..+..-. ..-..+...|+++|+.+...+.+
T Consensus 308 k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 308 TVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp CTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred ChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 8776532 11337999999999999887775
No 206
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=38.39 E-value=1.6e+02 Score=23.95 Aligned_cols=119 Identities=18% Similarity=0.184 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce----------------------------EEEEeecceecCCCC
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR----------------------------VKLTTKFGIRYEDGK 73 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~----------------------------~~i~tK~~~~~~~~~ 73 (208)
+.+....+.+++-+.|+.+|=|.-.-. +-..+-+ ++|+|=.
T Consensus 89 ~~e~~~~L~~~~~~~Gi~~~st~~d~~---svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGm-------- 157 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKGMIFISTLFSRA---AALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGM-------- 157 (349)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT--------
T ss_pred CHHHHHHHHHHHHHhCCeEEEeeCCHH---HHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCC--------
Confidence 667778888888899999986543322 1111111 4443322
Q ss_pred ccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCC-CCHHH-HHHHHHHHHHcC-CcceEeeCcccHH--HHHHHhhc
Q 040616 74 YSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTK-IPIEV-TIGELKRLVEEG-KIKHIDLSEASAS--TIRRAHTI 148 (208)
Q Consensus 74 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~-~~~~l~~l~~~G-~ir~iGvs~~~~~--~l~~~~~~ 148 (208)
.+.+.+..+++-..+. |. ++.++|+.... .+.++ -+.++..|++.= -+ -||.|.|+.. ....++..
T Consensus 158 ----at~~Ei~~Ave~i~~~-G~---~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~l-pVg~sdHt~G~~~~~AAvAl 228 (349)
T 2wqp_A 158 ----NSIESIKKSVEIIREA-GV---PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDA-IIGLSDHTLDNYACLGAVAL 228 (349)
T ss_dssp ----CCHHHHHHHHHHHHHH-TC---CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTS-EEEEECCSSSSHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHc-CC---CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCC-CEEeCCCCCcHHHHHHHHHh
Confidence 2688899999877654 43 99999986432 23333 367788888763 22 5799998753 22233333
Q ss_pred CCccEEeeccCcC
Q 040616 149 HPITVVRLEWSLR 161 (208)
Q Consensus 149 ~~~~~~q~~~~~~ 161 (208)
+ -++++..++|-
T Consensus 229 G-A~iIEkH~tld 240 (349)
T 2wqp_A 229 G-GSILERHFTDR 240 (349)
T ss_dssp T-CCEEEEEBCSC
T ss_pred C-CCEEEeCCCcc
Confidence 3 24666666653
No 207
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=38.17 E-value=1.3e+02 Score=24.33 Aligned_cols=90 Identities=14% Similarity=0.136 Sum_probs=50.0
Q ss_pred HHHHHHCCCCeEeCCCCCCCCchhhhcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEe-ecC
Q 040616 30 IHHAIDSGITVLDTSNVYGPHTNEILLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQ-HRI 107 (208)
Q Consensus 30 l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~l-h~~ 107 (208)
++...+.|++.+..-..-....+-+.+|. +.|+.-+.+.. -..+++.|++.+++.|+.++...=.++-+ |..
T Consensus 266 l~~l~~~g~d~i~~d~~~dl~~ak~~~g~~~~l~Gnldp~~------L~gt~e~I~~~v~~~l~~~g~~~g~I~n~Ghgi 339 (368)
T 4exq_A 266 LEDLAATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTI------LFAPPEAIRAEARAVLDSYGNHPGHVFNLGHGI 339 (368)
T ss_dssp HHHHHTSSCSEEECCTTSCHHHHHHHHTTSSEEEEEECGGG------GGSCHHHHHHHHHHHHHHHCSCSCEEEEESSCC
T ss_pred HHHHHHhCCCEEeeCCCCCHHHHHHHhCCCEEEEECCCHHH------hCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCCC
Confidence 44445677777543211111123344554 66666664322 13578999999999999998544445554 555
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 040616 108 DTKIPIEVTIGELKRLVE 125 (208)
Q Consensus 108 ~~~~~~~~~~~~l~~l~~ 125 (208)
.++.+.+.+-..++..++
T Consensus 340 ~p~tp~Env~a~veav~~ 357 (368)
T 4exq_A 340 SQFTPPEHVAELVDEVHR 357 (368)
T ss_dssp CTTCCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHH
Confidence 566665543333333333
No 208
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=37.43 E-value=54 Score=25.76 Aligned_cols=65 Identities=8% Similarity=0.041 Sum_probs=41.2
Q ss_pred HHHHHcCCcceEeeCcccHHHHHHHhhcCC-ccEEeec----------------------cCcCCCCccccHHHHHHHhC
Q 040616 121 KRLVEEGKIKHIDLSEASASTIRRAHTIHP-ITVVRLE----------------------WSLRSRDVEEEIVPTCRELG 177 (208)
Q Consensus 121 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~q~~----------------------~~~~~~~~~~~~l~~~~~~g 177 (208)
+.+++.|..+.+=++.|+.+.+.++.+..| +.+..+. +++-......++++.|+++|
T Consensus 149 ~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~G 228 (292)
T 3mz2_A 149 QLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHERG 228 (292)
T ss_dssp HHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHCC
Confidence 344456777788899999988888776532 1111110 11111112347999999999
Q ss_pred CcEEEccc
Q 040616 178 IGIVAYSL 185 (208)
Q Consensus 178 i~v~a~~p 185 (208)
+.|.+|.+
T Consensus 229 ~~V~vWTv 236 (292)
T 3mz2_A 229 VMCMISTA 236 (292)
T ss_dssp BCEEEECT
T ss_pred CEEEEEeC
Confidence 99999975
No 209
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=37.34 E-value=1.8e+02 Score=24.17 Aligned_cols=100 Identities=10% Similarity=-0.081 Sum_probs=65.6
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc-C-CcceEee-Cccc-HHHHHHHhhcCCccE
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE-G-KIKHIDL-SEAS-ASTIRRAHTIHPITV 153 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGv-s~~~-~~~l~~~~~~~~~~~ 153 (208)
.+++...+..++.++.+ +++++-.|-+..+ |+.+.++.+. | .|--.|= +.++ ++.+.++++....++
T Consensus 261 ~t~~eai~~~~~ll~~y-----~i~~IEdPl~~dD----~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~ 331 (417)
T 3qn3_A 261 FSSEALIERYVELCAKY-----PICSIEDGLAEND----FEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANA 331 (417)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESSSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred cCHHHHHHHHHHHHhhc-----ceeEEecCCCccc----HHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCE
Confidence 35666666666656654 5888888865443 4455555543 3 4543332 3344 899999999888899
Q ss_pred EeeccCcCCCC-ccccHHHHHHHhCCcEEEcccC
Q 040616 154 VRLEWSLRSRD-VEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 154 ~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl 186 (208)
+|+..+-.-.- .-..+...|+++|+.++.....
T Consensus 332 i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~s 365 (417)
T 3qn3_A 332 VLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRS 365 (417)
T ss_dssp EEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred EEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCCC
Confidence 99988754331 1237899999999998765543
No 210
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.28 E-value=33 Score=25.83 Aligned_cols=18 Identities=0% Similarity=0.209 Sum_probs=11.7
Q ss_pred cHHHHHHHhCCcEEEccc
Q 040616 168 EIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~p 185 (208)
..++.|+..|+..+...|
T Consensus 95 ~~i~~A~~lGa~~v~~~~ 112 (262)
T 3p6l_A 95 KMFKFAKAMDLEFITCEP 112 (262)
T ss_dssp HHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEecC
Confidence 567777777766666544
No 211
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=36.79 E-value=24 Score=21.08 Aligned_cols=47 Identities=15% Similarity=0.104 Sum_probs=30.8
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCC
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGK 128 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ 128 (208)
.+.+.+...+...++.= .+ . -+++. .|...++..+.+.|..+++.|.
T Consensus 27 v~~~~L~~~l~~~~~~~-~~-~-~V~I~-aD~~~~y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 27 LTEEMVTQLSRQEFDKD-NN-T-LFLVG-GAKEVPYEEVIKALNLLHLAGI 73 (74)
T ss_dssp ECHHHHHHHHHHHHHHC-TT-C-CEEEE-ECTTSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHhhC-CC-c-eEEEE-cCCCCCHHHHHHHHHHHHHcCC
Confidence 35566666665555432 12 1 23343 4677899999999999999884
No 212
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=35.97 E-value=1.5e+02 Score=22.85 Aligned_cols=57 Identities=18% Similarity=0.339 Sum_probs=34.9
Q ss_pred cceEeeCcccHHHHHHHhhcCC-ccEEeec----------------------cCcCCCCccccHHHHHHHhCCcEEEccc
Q 040616 129 IKHIDLSEASASTIRRAHTIHP-ITVVRLE----------------------WSLRSRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 129 ir~iGvs~~~~~~l~~~~~~~~-~~~~q~~----------------------~~~~~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
-+.+=+++|+.+.+.++.+..| +.+.++- +++-.......+++.++++|+.|.+|.+
T Consensus 170 ~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~G~~v~~wTv 249 (287)
T 2oog_A 170 NGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTV 249 (287)
T ss_dssp TTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGGGCCHHHHHHHHHTTCEECCBCC
T ss_pred CCCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhheEEcccHhhcCHHHHHHHHHCCCeEEEEeC
Confidence 5667789999988877765422 1111110 0110011234788999999999999985
No 213
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=35.38 E-value=42 Score=27.99 Aligned_cols=82 Identities=6% Similarity=-0.074 Sum_probs=54.4
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHhC
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRELG 177 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~g 177 (208)
++.++..|-+.. -++.+.++++.-.+ -+.|=+-++.+.+.++++....+++|+..+..-.- .-..+...|+++|
T Consensus 255 ~i~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~g 330 (426)
T 4e4f_A 255 RLFWMEDPTPAE----NQACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIADFASLYQ 330 (426)
T ss_dssp CCSEEECCSCCS----SGGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTT
T ss_pred CCCEEECCCChH----HHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcC
Confidence 444556664332 24556667665444 23444557788889999888899999877765321 1237899999999
Q ss_pred CcEEEccc
Q 040616 178 IGIVAYSL 185 (208)
Q Consensus 178 i~v~a~~p 185 (208)
+.+..+++
T Consensus 331 i~v~~h~~ 338 (426)
T 4e4f_A 331 VRTGSHGP 338 (426)
T ss_dssp CEEEECCC
T ss_pred CEEeeeCC
Confidence 99887654
No 214
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=34.08 E-value=1.1e+02 Score=20.68 Aligned_cols=49 Identities=8% Similarity=0.113 Sum_probs=33.6
Q ss_pred ccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHHhCCcEEEcccC
Q 040616 137 ASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 137 ~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl 186 (208)
.+++.+..+++. +|+++-+--..-.+- ...++.++++++||++..+..-
T Consensus 49 l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~ 98 (122)
T 2ab1_A 49 VQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTE 98 (122)
T ss_dssp CCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHH
T ss_pred CCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHH
Confidence 466778877663 366666644433332 3568999999999999987643
No 215
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=34.03 E-value=30 Score=29.34 Aligned_cols=96 Identities=10% Similarity=0.017 Sum_probs=58.4
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccc
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEE 167 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~ 167 (208)
+.++.|. ++ +.++-.|-+..+.-+-++.+.++++.-.+ -+.|-+.++...+.++++...++++|......--..-.
T Consensus 263 ~~~~~Le-~~--l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~GGit~a~ 339 (470)
T 3p0w_A 263 ALCKGQG-HL--VAYAEDPCGPEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLADPHFWTMQGSV 339 (470)
T ss_dssp HHHTTCT-TT--CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBCCHHHHCHHHHH
T ss_pred HHHHhcc-cc--ceeecCCCChhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHH
Confidence 3455554 33 56777774433211114555666654333 35555667888899998888888988764211111124
Q ss_pred cHHHHHHHhCCcEEEcccCc
Q 040616 168 EIVPTCRELGIGIVAYSLLG 187 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~pl~ 187 (208)
.+...|+++|+.+...+...
T Consensus 340 kia~lA~a~gv~~~~h~~~e 359 (470)
T 3p0w_A 340 RVAQLCDEWGLTWGSHSNNH 359 (470)
T ss_dssp HHHHHHHHHTCCCBCCCCSC
T ss_pred HHHHHHHHcCCEEEecCCcc
Confidence 78899999999987766543
No 216
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=33.91 E-value=1.7e+02 Score=22.95 Aligned_cols=119 Identities=15% Similarity=0.116 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-----------------EEEEeecceecCCCCccCCCChHHH
Q 040616 21 KPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-----------------VKLTTKFGIRYEDGKYSYCGDPAYL 83 (208)
Q Consensus 21 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-----------------~~i~tK~~~~~~~~~~~~~~~~~~i 83 (208)
.+.++..++++.+.+.|++.|.-. | -|..+-. +.|+|.... +
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~~t---G---GEPll~~~l~~li~~~~~~~~~~~i~i~TNG~l---------------l 108 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIRIT---G---GEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLL---------------L 108 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE---S---SCGGGSTTHHHHHHHHTTCTTCCEEEEEECSTT---------------H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEe---C---CCccchhhHHHHHHHHHhCCCCCeEEEEeCccc---------------h
Confidence 467889999999999999877642 2 1322221 334443321 1
Q ss_pred HHHHHHHHHHcCCCcccEEEeecCCC--------CC-CHHHHHHHHHHHHHcCC---cceEeeCcccHHHHHHHhh---c
Q 040616 84 RAACEASLKCLDVDCIDLYYQHRIDT--------KI-PIEVTIGELKRLVEEGK---IKHIDLSEASASTIRRAHT---I 148 (208)
Q Consensus 84 ~~~~~~sL~~L~~d~iDl~~lh~~~~--------~~-~~~~~~~~l~~l~~~G~---ir~iGvs~~~~~~l~~~~~---~ 148 (208)
.+ .-+.|...|++++. +-++..++ .. .++.++++++.+++.|. +..+-+...+.+++.++++ .
T Consensus 109 ~~-~~~~L~~~g~~~v~-iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv~~g~n~~ei~~~~~~~~~ 186 (340)
T 1tv8_A 109 KK-HGQKLYDAGLRRIN-VSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKD 186 (340)
T ss_dssp HH-HHHHHHHHTCCEEE-EECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEECTTTTGGGHHHHHHHHHH
T ss_pred HH-HHHHHHHCCCCEEE-EecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 22 23445556666554 33444322 12 57889999999999986 1222222234444444433 3
Q ss_pred CCccEEeeccCcCC
Q 040616 149 HPITVVRLEWSLRS 162 (208)
Q Consensus 149 ~~~~~~q~~~~~~~ 162 (208)
.++++.-+++.|..
T Consensus 187 ~g~~~~~i~~~p~~ 200 (340)
T 1tv8_A 187 KHIEIRFIEFMDVG 200 (340)
T ss_dssp TTCCEEEEECCCBC
T ss_pred cCCeEEEEEeeEcC
Confidence 44455455555543
No 217
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=33.82 E-value=29 Score=29.29 Aligned_cols=95 Identities=12% Similarity=0.053 Sum_probs=57.8
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccc
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEE 167 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~ 167 (208)
+.++.|. + . +.++-.|-+..+.-.-++.|.++++.-.+ -+.|-+.++...+.++++...++++|......--..-.
T Consensus 248 ~~~~~L~-~-~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~ 324 (455)
T 3pfr_A 248 QLCKGLN-D-V-LTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGAS 324 (455)
T ss_dssp HHHTTCT-T-T-CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHH
T ss_pred HHHHhhc-c-c-ceeeecCCChhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecCCcCCHHHHH
Confidence 3445553 2 3 56777764433211124566666654333 35555667788898888888888888754211111124
Q ss_pred cHHHHHHHhCCcEEEcccC
Q 040616 168 EIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~pl 186 (208)
.+...|+++|+.+...+..
T Consensus 325 kia~lA~a~gv~~~~h~~~ 343 (455)
T 3pfr_A 325 RVAQLCNEWGLTWGCHSNN 343 (455)
T ss_dssp HHHHHHHHTTCCCBCCCCS
T ss_pred HHHHHHHHcCCEEEecCCc
Confidence 7899999999998766554
No 218
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=33.74 E-value=33 Score=28.59 Aligned_cols=99 Identities=10% Similarity=0.036 Sum_probs=62.6
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHHHHHHhhcCCccEEee
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
++.+...+-+ +.|+.+++ .++..|-+. +.++.+.++++.-.|- +.|=+-++.+.++++++....+++|+
T Consensus 233 ~~~~~A~~~~-~~Le~~~i-----~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~ 302 (422)
T 3tji_A 233 LFPQQAVQLA-KQLEPFQP-----YFIEDILPP----QQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVNRRIDFIRC 302 (422)
T ss_dssp SCHHHHHHHH-HHHGGGCC-----SEEECCSCG----GGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred CCHHHHHHHH-HHHHhhCC-----CeEECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEec
Confidence 4444433222 34555544 344555321 2356677777765442 34445577888999998888999999
Q ss_pred ccCcCCCC-ccccHHHHHHHhCCcEEEcccC
Q 040616 157 EWSLRSRD-VEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 157 ~~~~~~~~-~~~~~l~~~~~~gi~v~a~~pl 186 (208)
..+..--- .-..+...|+++|+.+...++.
T Consensus 303 k~~~~GGit~~~kia~lA~a~gv~v~~h~~~ 333 (422)
T 3tji_A 303 HVSQIGGITPALKLAHLCQAFGVRLAWHGPG 333 (422)
T ss_dssp CGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 87764321 1347899999999999887773
No 219
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=33.42 E-value=48 Score=21.43 Aligned_cols=57 Identities=14% Similarity=-0.048 Sum_probs=30.3
Q ss_pred CcccEEEeecCCCCCCHHHHHHHHHHHHHc---CCcceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 97 DCIDLYYQHRIDTKIPIEVTIGELKRLVEE---GKIKHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 97 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
..+|++++....+..+ .++.+..+++. ..+.-|-+|........++.+....+++.-
T Consensus 46 ~~~dlvi~d~~l~~~~---g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~K 105 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMD---GYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVK 105 (133)
T ss_dssp SCCSEEEECSSCSSSC---HHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEES
T ss_pred CCCCEEEEeCCCCCCC---HHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEec
Confidence 4589999976544433 35555566664 256677777765443355555444444443
No 220
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=33.35 E-value=66 Score=25.76 Aligned_cols=85 Identities=8% Similarity=0.090 Sum_probs=50.9
Q ss_pred ccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCC-CccccHHHHHHHh
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSR-DVEEEIVPTCREL 176 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~l~~~~~~ 176 (208)
.++.++-.|-+..+ ++.+.++.++-.+ -+.|=|-++...+.++. ...+++|+..+..-- ..-..+...|+++
T Consensus 200 ~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~d~i~~k~~~~GGit~~~~ia~~A~~~ 273 (338)
T 3ijl_A 200 KGIVMIEQPMPKEQ----LDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAFTGINIKLMKCTGMREAWKMVTLAHAL 273 (338)
T ss_dssp TTEEEEECCSCTTC----HHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTBSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred CCCCEEECCCCCCc----HHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhCCEEEecccccCCHHHHHHHHHHHHHc
Confidence 45667776644332 4555666665444 34444555555555553 346777765554321 1123789999999
Q ss_pred CCcEEEcccCccc
Q 040616 177 GIGIVAYSLLGRG 189 (208)
Q Consensus 177 gi~v~a~~pl~~G 189 (208)
|+.++..+.+.++
T Consensus 274 gi~~~~~~~~es~ 286 (338)
T 3ijl_A 274 GMRVMVGCMTETS 286 (338)
T ss_dssp TCEEEECCCSCCH
T ss_pred CCEEEecCCcccH
Confidence 9999988877554
No 221
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=33.21 E-value=1.8e+02 Score=22.99 Aligned_cols=105 Identities=11% Similarity=0.053 Sum_probs=61.8
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc--CCc-ceEeeCcccHHHHHHHhhc--CCccE
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE--GKI-KHIDLSEASASTIRRAHTI--HPITV 153 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G~i-r~iGvs~~~~~~l~~~~~~--~~~~~ 153 (208)
+.+.+.+..++.. .-|-|.||+=. .....+.++.++.+..+.+. ... --|-|-+++++.++++++. ...-+
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~---g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~iI 110 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM---DDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKSIV 110 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC---CCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCCEE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC---CCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCCEE
Confidence 4444444444433 46889999976 12223444444444444432 011 2477778999999999994 44444
Q ss_pred EeeccCcCCCCc-cccHHHHHHHhCCcEEEcccCccc
Q 040616 154 VRLEWSLRSRDV-EEEIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 154 ~q~~~~~~~~~~-~~~~l~~~~~~gi~v~a~~pl~~G 189 (208)
|-+ |.....+ -.++++.++++|.+++.+.--..|
T Consensus 111 NdI--s~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G 145 (300)
T 3k13_A 111 NSI--SLKEGEEVFLEHARIIKQYGAATVVMAFDEKG 145 (300)
T ss_dssp EEE--CSTTCHHHHHHHHHHHHHHTCEEEEESEETTE
T ss_pred EeC--CcccCChhHHHHHHHHHHhCCeEEEEeeCCCC
Confidence 443 3332210 127899999999999987653344
No 222
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2
Probab=33.07 E-value=86 Score=21.06 Aligned_cols=60 Identities=12% Similarity=0.094 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHH-HHHHcCCcceEeeCcccH
Q 040616 80 PAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELK-RLVEEGKIKHIDLSEASA 139 (208)
Q Consensus 80 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~-~l~~~G~ir~iGvs~~~~ 139 (208)
.+.+...++..++.-+.+.+++|+--.--........|+.+. .+.....++.+-|-+-+.
T Consensus 35 ~~~l~~~l~~~l~~~~~~~i~ll~~~~~f~G~~~~a~~~d~k~~~~h~~~~~RiAvV~d~~ 95 (126)
T 2q3l_A 35 YEQMTPLLESALAGIKTPEIVALIDITELDGLSLHAAWDDLKLGLKHGKEFKRVAIIGQGE 95 (126)
T ss_dssp HHHHHHHHHHHTTTCCSSCEEEEEEEEEEEEECHHHHHHHHHHHHHHGGGEEEEEEECCSH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEEecCCCCCCHHHHHHHHHhhhhHHhcCCEEEEEcChH
Confidence 445666666666666555588887653222245778888877 677788888888866443
No 223
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=32.46 E-value=97 Score=19.66 Aligned_cols=64 Identities=9% Similarity=0.002 Sum_probs=35.6
Q ss_pred HHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHH---cCCcceEeeCcc-cHHHHHHHhhcCCccEEeecc
Q 040616 92 KCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVE---EGKIKHIDLSEA-SASTIRRAHTIHPITVVRLEW 158 (208)
Q Consensus 92 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~---~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~~ 158 (208)
+.+....+|++++...-+..+- ++.+..+++ ...+.-|-+|.. +.+...++++.+..+++.-++
T Consensus 43 ~~~~~~~~dlvi~D~~l~~~~g---~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~ 110 (128)
T 1jbe_A 43 NKLQAGGYGFVISDWNMPNMDG---LELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPF 110 (128)
T ss_dssp HHHTTCCCCEEEEESCCSSSCH---HHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSC
T ss_pred HHHHhcCCCEEEEeCCCCCCCH---HHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCceeecCC
Confidence 3344456899998765444333 344455554 234566777664 345566666665545554433
No 224
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=32.30 E-value=82 Score=25.75 Aligned_cols=69 Identities=10% Similarity=-0.091 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCCcccEEEeecCCCCCCHH-HHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 85 AACEASLKCLDVDCIDLYYQHRIDTKIPIE-VTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 85 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~-~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
..+-+.|+..|+|||++ |......... ..++.+.++++.=.+--|+...++++..+++++....|.+++
T Consensus 258 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 258 FYLAGELDRRGLAYLHF---NEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCC------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---eCCcccCCCCcchHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEee
Confidence 34566778888777766 4321100000 124556667776667778888888999999999888888887
No 225
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=32.01 E-value=1.9e+02 Score=22.96 Aligned_cols=97 Identities=13% Similarity=0.108 Sum_probs=54.2
Q ss_pred HHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc-CCcceEeeCcccHHHHHHHhhc---CCccEEeecc--
Q 040616 85 AACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE-GKIKHIDLSEASASTIRRAHTI---HPITVVRLEW-- 158 (208)
Q Consensus 85 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~---~~~~~~q~~~-- 158 (208)
-.+-+.|.++|+++|.+-+ |.. .++-|+.+.++.+. ..++..+++.-+...++.+++. ...+.+.+..
T Consensus 31 l~ia~~L~~~Gv~~IE~g~---p~~---~~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s~ 104 (325)
T 3eeg_A 31 IIVAKALDELGVDVIEAGF---PVS---SPGDFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIGS 104 (325)
T ss_dssp HHHHHHHHHHTCSEEEEEC---TTS---CHHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeC---CCC---CHhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEecc
Confidence 3455568889999999863 321 13345666666654 3456666655456666655544 2233333321
Q ss_pred -------CcCCC--C---ccccHHHHHHHhCCcEEEcccCc
Q 040616 159 -------SLRSR--D---VEEEIVPTCRELGIGIVAYSLLG 187 (208)
Q Consensus 159 -------~~~~~--~---~~~~~l~~~~~~gi~v~a~~pl~ 187 (208)
|+-.. + .-.+.+++++++|+.+.-..|.+
T Consensus 105 Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~ 145 (325)
T 3eeg_A 105 SDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDA 145 (325)
T ss_dssp SHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETG
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 11100 0 12368899999999887555543
No 226
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=31.80 E-value=30 Score=26.12 Aligned_cols=18 Identities=6% Similarity=0.183 Sum_probs=11.8
Q ss_pred cHHHHHHHhCCcEEEccc
Q 040616 168 EIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~p 185 (208)
..++.|++.|...+...|
T Consensus 93 ~~i~~A~~lGa~~v~~~p 110 (257)
T 3lmz_A 93 RAFDYAKRVGVKLIVGVP 110 (257)
T ss_dssp HHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHhCCCEEEecC
Confidence 567777777777666543
No 227
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=31.68 E-value=27 Score=28.47 Aligned_cols=86 Identities=16% Similarity=0.057 Sum_probs=53.0
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCcc-eEeeCcccHHH--HHHHhhcCCccEEeeccCcCCCC-ccccHHHHHHH
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKIK-HIDLSEASAST--IRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCRE 175 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~--l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~~ 175 (208)
++.++-.|-+..+ |+.+.++.++-.+- +.|=+-++... +.++++...++++|+..+..-.- .-..+...|++
T Consensus 235 ~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~ 310 (377)
T 2pge_A 235 HLHSIEQPIRQHQ----WSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGFHYAGQWIELARE 310 (377)
T ss_dssp CCSEEECCBCSSC----HHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSHHHHHHHHHHHHH
T ss_pred CCcEEEccCCccc----HHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCHHHHHHHHHHHHH
Confidence 4556666643322 56666666654442 33333333333 66777777788898877654321 12378889999
Q ss_pred hCCcEEEcccCccc
Q 040616 176 LGIGIVAYSLLGRG 189 (208)
Q Consensus 176 ~gi~v~a~~pl~~G 189 (208)
+|+.++..+.+.++
T Consensus 311 ~g~~~~~~~~~es~ 324 (377)
T 2pge_A 311 RGIGFWITSALESN 324 (377)
T ss_dssp TTCEEEEBCCSCCH
T ss_pred CCCeEEecCCcccH
Confidence 99999988776544
No 228
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=31.31 E-value=32 Score=28.98 Aligned_cols=95 Identities=8% Similarity=0.058 Sum_probs=57.2
Q ss_pred HHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc-ceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccc
Q 040616 89 ASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI-KHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEE 167 (208)
Q Consensus 89 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~ 167 (208)
+.++.|. + . +.++-.|-+..+.-+-++.|.++++.-.+ -+.|-+.++...+.++++...++++|......--..-.
T Consensus 245 ~~~~~L~-~-~-i~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~ 321 (450)
T 3mzn_A 245 RVLEPIK-H-L-LSYAEDPCGQEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLADCHFWTMQGAV 321 (450)
T ss_dssp HHHGGGG-G-G-CSEEESSBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHH
T ss_pred HHHHHhh-h-c-cceeeCCCCcccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHH
Confidence 3444553 2 3 56677764433211124555666654333 35555667888888888888888888754211111124
Q ss_pred cHHHHHHHhCCcEEEcccC
Q 040616 168 EIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~pl 186 (208)
.+...|+++|+.+...+..
T Consensus 322 kia~lA~a~gv~~~~h~~~ 340 (450)
T 3mzn_A 322 AVGELCNEWGMTWGSHSNN 340 (450)
T ss_dssp HHHHHHHHTTCCCBCCCCS
T ss_pred HHHHHHHHcCCEEEecCCc
Confidence 7899999999998766554
No 229
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=30.85 E-value=44 Score=25.55 Aligned_cols=19 Identities=16% Similarity=0.142 Sum_probs=12.8
Q ss_pred cHHHHHHHhCCcEEE-cccC
Q 040616 168 EIVPTCRELGIGIVA-YSLL 186 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a-~~pl 186 (208)
++.+.++++|+.+.+ .+|.
T Consensus 51 ~~~~~l~~~gl~i~~~~~~~ 70 (294)
T 3vni_A 51 ELKACAHGNGITLTVGHGPS 70 (294)
T ss_dssp HHHHHHHHTTCEEEEEECCC
T ss_pred HHHHHHHHcCCeEEEeecCC
Confidence 667777777777776 4443
No 230
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=30.84 E-value=2.1e+02 Score=23.02 Aligned_cols=112 Identities=13% Similarity=0.136 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHCC---CCeEeCCCCCCC--Cchhhhcce---EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHc
Q 040616 23 ESCMIALIHHAIDSG---ITVLDTSNVYGP--HTNEILLAR---VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCL 94 (208)
Q Consensus 23 ~~~~~~~l~~A~~~G---i~~~DtA~~Yg~--g~~e~~~g~---~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 94 (208)
.+...+++....+.- +-.+|.++..+. ..-++.++. ++|.+|.-... .....+.+++.++..++.+
T Consensus 58 ~e~f~~~L~~~~~~~~lil~VvD~~d~~~s~~~~l~~~l~~~piilV~NK~DLl~------~~~~~~~~~~~l~~~~~~~ 131 (369)
T 3ec1_A 58 DDDFLSMLHRIGESKALVVNIVDIFDFNGSFIPGLPRFAADNPILLVGNKADLLP------RSVKYPKLLRWMRRMAEEL 131 (369)
T ss_dssp -CHHHHHHHHHHHHCCEEEEEEETTCSGGGCCSSHHHHCTTSCEEEEEECGGGSC------TTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhccCcEEEEEEECCCCCCchhhHHHHHhCCCCEEEEEEChhcCC------CccCHHHHHHHHHHHHHHc
Confidence 344566666664421 335787764421 112344444 78889987532 1234567777777778888
Q ss_pred CCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHH
Q 040616 95 DVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASAST 141 (208)
Q Consensus 95 ~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~ 141 (208)
|....+++.+-. .....+++..+.+.++.+...|--+|-+|.....
T Consensus 132 g~~~~~v~~iSA-~~g~gi~~L~~~I~~~~~~~~i~~vG~~nvGKSt 177 (369)
T 3ec1_A 132 GLCPVDVCLVSA-AKGIGMAKVMEAINRYREGGDVYVVGCTNVGKST 177 (369)
T ss_dssp TCCCSEEEECBT-TTTBTHHHHHHHHHHHHTTSCEEEECCTTSSHHH
T ss_pred CCCcccEEEEEC-CCCCCHHHHHHHHHhhcccCcEEEEcCCCCchHH
Confidence 865456665543 2335678899999888888889999999976543
No 231
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=30.36 E-value=1.3e+02 Score=21.17 Aligned_cols=37 Identities=19% Similarity=0.173 Sum_probs=26.7
Q ss_pred CccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccC
Q 040616 150 PITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLL 186 (208)
Q Consensus 150 ~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl 186 (208)
.|+++-+--..-.+....++.+.++++||++..+..-
T Consensus 88 ~pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M~T~ 124 (150)
T 3cpk_A 88 APEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDTQ 124 (150)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHH
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEeCHH
Confidence 4677666555444444558999999999999987654
No 232
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=30.12 E-value=1.9e+02 Score=25.03 Aligned_cols=83 Identities=13% Similarity=0.074 Sum_probs=53.2
Q ss_pred ccEEE--eecCCCCCCHHHHHHHHHHHHHcCCcceEeeCc-----------ccHH-HHHHHhhcCCccEEeeccCcCCCC
Q 040616 99 IDLYY--QHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSE-----------ASAS-TIRRAHTIHPITVVRLEWSLRSRD 164 (208)
Q Consensus 99 iDl~~--lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-----------~~~~-~l~~~~~~~~~~~~q~~~~~~~~~ 164 (208)
.|.++ +|.+. ..+..+..+.+.++.+.|.+.-+|=-. .+.+ .+..+.+.. ..+|++.+.+...
T Consensus 420 ~D~vI~svH~~~-~~~~~~~~~~~~~ai~~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g--~~lEIN~~~~r~~ 496 (578)
T 2w9m_A 420 LDYVVVSVHSNF-TLDAARQTERLIRAVSHPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANG--TVVEINANAARLD 496 (578)
T ss_dssp SSEEEEECCSCT-TSCHHHHHHHHHHHHTCSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT--CEEEEECSTTTCB
T ss_pred CCEEEEEeccCC-CCCHHHHHHHHHHHHhcCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCC--CEEEEECCCCCcC
Confidence 46666 88764 335566778888888889988777221 1333 344444433 4677776665433
Q ss_pred ccccHHHHHHHhCCcEEEccc
Q 040616 165 VEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 165 ~~~~~l~~~~~~gi~v~a~~p 185 (208)
....++..|++ |+.+++-|-
T Consensus 497 ~~~~~~~~a~e-Gl~i~igSD 516 (578)
T 2w9m_A 497 LDWREALRWRE-RLKFAINTD 516 (578)
T ss_dssp SCHHHHHHHTT-TCCEEEECC
T ss_pred cHHHHHHHHHc-CCEEEEECC
Confidence 35589999999 999876443
No 233
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=29.17 E-value=28 Score=16.88 Aligned_cols=17 Identities=6% Similarity=-0.013 Sum_probs=8.7
Q ss_pred EeeCcccHHHHHHHhhc
Q 040616 132 IDLSEASASTIRRAHTI 148 (208)
Q Consensus 132 iGvs~~~~~~l~~~~~~ 148 (208)
-||..|+..+++++++.
T Consensus 4 sgvtrfdekqieelldn 20 (31)
T 4h62_V 4 SGVTRFDEKQIEELLDN 20 (31)
T ss_dssp ------CHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHH
Confidence 37788888888888763
No 234
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=28.93 E-value=2.3e+02 Score=22.87 Aligned_cols=67 Identities=9% Similarity=-0.077 Sum_probs=44.9
Q ss_pred HHHHHHHHcCCCcccEEEeecC-CCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 86 ACEASLKCLDVDCIDLYYQHRI-DTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 86 ~~~~sL~~L~~d~iDl~~lh~~-~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
.+-+.|+..|.|||++-.-.+. .+.. -++.+.++++.=.+--++...++++.++++++....|.+++
T Consensus 255 ~~a~~l~~~G~d~i~v~~~~~~~~~~~----~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 255 YLIEELAKRGIAYLHMSETDLAGGKPY----SEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHHTTCSEEEEECCBTTBCCCC----CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHhCCCEEEEecCcccCCCcc----cHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 3456678888777765421100 1111 24556677776667777887889999999999888888887
No 235
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=28.69 E-value=2.3e+02 Score=22.82 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=47.9
Q ss_pred CcCcccccccccccCCCC---------CCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcceEEEEeecceecCCC
Q 040616 2 EVSGQGLRCMGMFAFYGP---------PKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLARVKLTTKFGIRYEDG 72 (208)
Q Consensus 2 ~v~~lg~G~~~~~~~~~~---------~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~~~i~tK~~~~~~~~ 72 (208)
-||.+||+|-.|..+|-. -.+.+++.++++.--+.|.+ |-+.|+.-+...
T Consensus 205 GVpVvgy~td~fPaFy~r~Sg~~~~~rvd~~~e~A~i~~~~~~lgl~-----------------~g~lvanPIP~e---- 263 (335)
T 4gim_A 205 GVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARAMVVKWQSGLN-----------------GGLVVANPIPEQ---- 263 (335)
T ss_dssp TCCEEEETCSBCCBTTBSCCSSBCSEEECCHHHHHHHHHHHHHTTCC-----------------SCEEEECCCCGG----
T ss_pred CceEEEecCCCCceeeccCCCCcCcceeCCHHHHHHHHHHHHHcCCC-----------------CceEEeCCCCch----
Confidence 489999999999887643 22567777777776666653 115555544432
Q ss_pred CccCCCChHHHHHHHHHHHHHcC
Q 040616 73 KYSYCGDPAYLRAACEASLKCLD 95 (208)
Q Consensus 73 ~~~~~~~~~~i~~~~~~sL~~L~ 95 (208)
...+.+.+.+.+++.|+...
T Consensus 264 ---~~i~~~~i~~~I~~Al~eA~ 283 (335)
T 4gim_A 264 ---FAMPEHTINAAIDQAVAEAE 283 (335)
T ss_dssp ---GCCCHHHHHHHHHHHHHHHH
T ss_pred ---hcCCHHHHHHHHHHHHHHHH
Confidence 25678889999998887663
No 236
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=28.67 E-value=2.1e+02 Score=22.46 Aligned_cols=96 Identities=8% Similarity=0.009 Sum_probs=52.1
Q ss_pred HHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCc-------ccHHHHHHHhhcCCccEEee
Q 040616 84 RAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSE-------ASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 84 ~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-------~~~~~l~~~~~~~~~~~~q~ 156 (208)
.+.+++.|+..+ +|||.+=+-|-......+ +-+.++-+++-|.--+.|=+= -..++..+..+...|+++++
T Consensus 52 ~~~~~DlLe~ag-~yID~lKfg~GTs~l~~~-l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEI 129 (276)
T 1u83_A 52 LQFFKDAIAGAS-DYIDFVKFGWGTSLLTKD-LEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEI 129 (276)
T ss_dssp HHHHHHHHHHHG-GGCCEEEECTTGGGGCTT-HHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhh-hhcceEEecCcchhhhHH-HHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEE
Confidence 456778888888 899999998854332222 334444445555545555311 12233333333356777776
Q ss_pred ccCcCCCCccc--cHHHHHHHhCCcEEE
Q 040616 157 EWSLRSRDVEE--EIVPTCRELGIGIVA 182 (208)
Q Consensus 157 ~~~~~~~~~~~--~~l~~~~~~gi~v~a 182 (208)
.-.-..-..+. .+++.++.. ..|+.
T Consensus 130 SdGti~l~~~~~~~lI~~a~~~-f~Vl~ 156 (276)
T 1u83_A 130 SNGTLPMTNKEKAAYIADFSDE-FLVLS 156 (276)
T ss_dssp CCSSSCCCHHHHHHHHHHHTTT-SEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHhh-cEEee
Confidence 55555443222 466666665 55543
No 237
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=28.64 E-value=81 Score=25.04 Aligned_cols=90 Identities=11% Similarity=0.033 Sum_probs=55.9
Q ss_pred HHHHHcCCC-cccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccc
Q 040616 89 ASLKCLDVD-CIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEE 167 (208)
Q Consensus 89 ~sL~~L~~d-~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~ 167 (208)
+.+++|.-+ ..++.++-.|-+.. .-++.+ +. .- + -|-.-..+...+.++++...++++|+..... - ..
T Consensus 167 ~~~~~l~~~~~~~l~~iEqP~~~~---~d~~~~--l~-~~-i-PIa~dEs~~~~~~~~i~~~a~d~v~~k~~~~-G-i~- 235 (330)
T 3caw_A 167 KFMVNLPLTVRPLIEYVEDPFPFD---FHAWGE--AR-KL-A-KIALDNQYDKVPWGKIASAPFDVIVIKPAKT-D-VD- 235 (330)
T ss_dssp HHHHTSCTTTGGGEEEEECCSSCC---HHHHHH--HT-TT-S-CEEESTTGGGCCTTTCSSCSCSEEEECTTTS-C-HH-
T ss_pred HHHHHhhhhccCCceEEECCCCCC---ccHHHH--HH-hc-C-cEEeCCCCHHHHHHHHHcCCCCEEEechhhc-c-HH-
Confidence 345555321 17888888875443 023333 33 22 2 3333222555666666667789999988776 3 23
Q ss_pred cHHHHHHHhCCcEEEcccCccc
Q 040616 168 EIVPTCRELGIGIVAYSLLGRG 189 (208)
Q Consensus 168 ~~l~~~~~~gi~v~a~~pl~~G 189 (208)
.+...|+++|+.++..+.+.++
T Consensus 236 ~i~~~A~~~gi~~~~~~~~es~ 257 (330)
T 3caw_A 236 KAVAQCQKWNLKLAVTSYMDHP 257 (330)
T ss_dssp HHHHHHHHTTCEEEEBCCSCCH
T ss_pred HHHHHHHHcCCcEEEeCccCcH
Confidence 8999999999999998765543
No 238
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=28.41 E-value=1.1e+02 Score=24.92 Aligned_cols=69 Identities=13% Similarity=0.005 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCCcccEEEeecC-CCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeec
Q 040616 85 AACEASLKCLDVDCIDLYYQHRI-DTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 85 ~~~~~sL~~L~~d~iDl~~lh~~-~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 157 (208)
..+-+.|+..|+|||++----.. .+..+ ++.+.++++.=.+--|++..++++..+++++....|.+++-
T Consensus 253 ~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 253 TAAAALLNKHRIVYLHIAEVDWDDAPDTP----VSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp HHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHcCCCEEEEeCCCcCCCCCcc----HHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhc
Confidence 34556677888777765421110 11112 34556666665677788888899999999998888888873
No 239
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=28.30 E-value=1.5e+02 Score=23.65 Aligned_cols=94 Identities=11% Similarity=-0.028 Sum_probs=53.1
Q ss_pred EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCC--CCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 59 VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDT--KIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 59 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
+-|..|+...... ....+.+... .+-+.|+..|.|||++.--..... .......++.+.++++.=.+--++...
T Consensus 210 ~pv~vris~~~~~---~~g~~~~~~~-~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Gg 285 (338)
T 1z41_A 210 GPLFVRVSASDYT---DKGLDIADHI-GFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGM 285 (338)
T ss_dssp SCEEEEEECCCCS---TTSCCHHHHH-HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSS
T ss_pred CcEEEEecCcccC---CCCCCHHHHH-HHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECC
Confidence 4466676543210 0123444433 345667888988887743211000 011111245555666654566677766
Q ss_pred c-cHHHHHHHhhcCCccEEee
Q 040616 137 A-SASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 137 ~-~~~~l~~~~~~~~~~~~q~ 156 (208)
. +++.++++++....|.+++
T Consensus 286 i~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 286 ITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp CCSHHHHHHHHHTTSCSEEEE
T ss_pred CCCHHHHHHHHHcCCceEEee
Confidence 5 7899999999887888877
No 240
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=27.97 E-value=2e+02 Score=21.85 Aligned_cols=72 Identities=10% Similarity=-0.045 Sum_probs=39.2
Q ss_pred HHHHHHHHHHc--CCcceEeeCc-ccH----HHHHHHhhcCCccEEeeccCc----CCCCccccHHHHHHHhCCcEEEcc
Q 040616 116 TIGELKRLVEE--GKIKHIDLSE-ASA----STIRRAHTIHPITVVRLEWSL----RSRDVEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 116 ~~~~l~~l~~~--G~ir~iGvs~-~~~----~~l~~~~~~~~~~~~q~~~~~----~~~~~~~~~l~~~~~~gi~v~a~~ 184 (208)
..+.+.++.++ +++..+|+-+ ... ++++++++...+..+.+..+. .....-..+++.|+++|+.|+.+.
T Consensus 76 ~n~~~~~~~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 155 (307)
T 2f6k_A 76 ANDDGKSLAQQYPDQLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHP 155 (307)
T ss_dssp HHHHHHHHHHHCTTTEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHhCccceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECC
Confidence 34555566554 4455555544 222 345555543344444443221 111123479999999999999876
Q ss_pred cCc
Q 040616 185 LLG 187 (208)
Q Consensus 185 pl~ 187 (208)
.-.
T Consensus 156 ~~~ 158 (307)
T 2f6k_A 156 NEP 158 (307)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 241
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=27.65 E-value=1.6e+02 Score=22.07 Aligned_cols=133 Identities=13% Similarity=0.056 Sum_probs=80.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCC
Q 040616 18 GPPKPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDV 96 (208)
Q Consensus 18 ~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~ 96 (208)
++..+.++..++++.|.+.|..-+-..+.|=.--.|..-|. +-|++-++.+. ...+.+.....+++.++ +|-
T Consensus 13 ~p~~t~~~i~~l~~~a~~~~~~aVcv~p~~v~~~~~~l~~~~v~v~~vigFP~------G~~~~~~k~~e~~~Ai~-~GA 85 (220)
T 1ub3_A 13 KPTATLEEVAKAAEEALEYGFYGLCIPPSYVAWVRARYPHAPFRLVTVVGFPL------GYQEKEVKALEAALACA-RGA 85 (220)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEECCGGGHHHHHHHCTTCSSEEEEEESTTT------CCSCHHHHHHHHHHHHH-TTC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHhCCCCceEEEEecCCC------CCCchHHHHHHHHHHHH-cCC
Confidence 34457888999999999999988877665521012222232 55666665432 12345555566777766 799
Q ss_pred CcccEEEeecCCCCCCHHHHHHHHHHHHHcC---CcceEe-eCcccHHHHHHHhhc---CCccEEeec
Q 040616 97 DCIDLYYQHRIDTKIPIEVTIGELKRLVEEG---KIKHID-LSEASASTIRRAHTI---HPITVVRLE 157 (208)
Q Consensus 97 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G---~ir~iG-vs~~~~~~l~~~~~~---~~~~~~q~~ 157 (208)
|-||+++--........+.+.+.+.++++.- .++-|- .+-.+.+++..+.+. ...|++...
T Consensus 86 devd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 86 DEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp SEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred CEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 9999976322111234566777777777753 223222 223456666666554 456888888
No 242
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=27.32 E-value=1.3e+02 Score=19.56 Aligned_cols=66 Identities=11% Similarity=-0.006 Sum_probs=39.3
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHH---cCCcceEeeCcc-cHHHHHHHhhcCCccEEeecc
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVE---EGKIKHIDLSEA-SASTIRRAHTIHPITVVRLEW 158 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~---~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~~ 158 (208)
.++.+....+|++++....+. .+.++.+..+++ ...+.-|-++.. +.+...++++.+..+++.-++
T Consensus 43 a~~~l~~~~~dlii~D~~l~~---~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~ 112 (144)
T 3kht_A 43 ALYQVQQAKYDLIILDIGLPI---ANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSS 112 (144)
T ss_dssp HHHHHTTCCCSEEEECTTCGG---GCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCT
T ss_pred HHHHhhcCCCCEEEEeCCCCC---CCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCC
Confidence 344445566899998754332 334566666665 235667777764 456666777666555555544
No 243
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=27.15 E-value=1.8e+02 Score=24.01 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=71.9
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce----------------------------EEEEeecceecCCCC
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR----------------------------VKLTTKFGIRYEDGK 73 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~----------------------------~~i~tK~~~~~~~~~ 73 (208)
+.+....+.+++-+.|+.+|=|.-.-. +-.++-+ |+|+|=.
T Consensus 99 ~~e~~~~L~~~~~~~Gi~~~stpfD~~---svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGm-------- 167 (385)
T 1vli_A 99 PAEWILPLLDYCREKQVIFLSTVCDEG---SADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAG-------- 167 (385)
T ss_dssp CGGGHHHHHHHHHHTTCEEECBCCSHH---HHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCcEEEccCCHH---HHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCC--------
Confidence 566678888888899999985543321 2122211 4443322
Q ss_pred ccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCC-CCHHH-HHHHHHHHHHcC-CcceEeeCcccHH---HHHHHhh
Q 040616 74 YSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTK-IPIEV-TIGELKRLVEEG-KIKHIDLSEASAS---TIRRAHT 147 (208)
Q Consensus 74 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~-~~~~l~~l~~~G-~ir~iGvs~~~~~---~l~~~~~ 147 (208)
.+.+.+..+++-..+. |.+ ++.++|+.... .+.++ -+.++..|++.= -+ -||.|.|+.. ....++.
T Consensus 168 ----aTl~Ei~~Ave~i~~~-Gn~--~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~l-pVG~SdHt~G~~~~~~AAvA 239 (385)
T 1vli_A 168 ----AEISDVHEAWRTIRAE-GNN--QIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEA-VIGFSDHSEHPTEAPCAAVR 239 (385)
T ss_dssp ----CCHHHHHHHHHHHHTT-TCC--CEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTS-EEEEEECCSSSSHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHC-CCC--cEEEEeccCCCCCChhhcCHHHHHHHHHHcCCC-CEEeCCCCCCchHHHHHHHH
Confidence 2678888888876544 443 88999976332 23333 267777777763 22 5799998744 3333444
Q ss_pred cCCccEEeeccCcC
Q 040616 148 IHPITVVRLEWSLR 161 (208)
Q Consensus 148 ~~~~~~~q~~~~~~ 161 (208)
.+ -++++..++|-
T Consensus 240 lG-A~iIEkHftld 252 (385)
T 1vli_A 240 LG-AKLIEKHFTID 252 (385)
T ss_dssp TT-CSEEEEEBCSC
T ss_pred cC-CCEEEeCCCcc
Confidence 33 35777777663
No 244
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=27.01 E-value=96 Score=24.68 Aligned_cols=27 Identities=15% Similarity=0.224 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHcCCC--cccEEEeecCC
Q 040616 82 YLRAACEASLKCLDVD--CIDLYYQHRID 108 (208)
Q Consensus 82 ~i~~~~~~sL~~L~~d--~iDl~~lh~~~ 108 (208)
.+.+.+++.|++.|++ -||.+.+|..+
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~Hq~~ 275 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVIHQVS 275 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEECCSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCC
Confidence 3456778888887764 58999999864
No 245
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=26.92 E-value=2e+02 Score=21.48 Aligned_cols=19 Identities=21% Similarity=0.490 Sum_probs=16.5
Q ss_pred ccHHHHHHHhCCcEEEccc
Q 040616 167 EEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 167 ~~~l~~~~~~gi~v~a~~p 185 (208)
.++++.++++|+.|.+|.+
T Consensus 197 ~~~v~~~~~~G~~v~~wTv 215 (247)
T 2otd_A 197 KARVMQLKDAGLRILVYTV 215 (247)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEcc
Confidence 4788999999999999985
No 246
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=26.47 E-value=2.8e+02 Score=23.97 Aligned_cols=100 Identities=7% Similarity=-0.004 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCC-CCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc--CCccE
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTK-IPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI--HPITV 153 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~ 153 (208)
..+.+.+.+..++.. .-|-|.||+= |+.. .+.++-++.+...+++-.=--|.|-+++++.++++++. ...-+
T Consensus 336 ~~~~~~a~~~A~~~v-~~GAdiIDIg----pg~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~~G~~iI 410 (566)
T 1q7z_A 336 KGNEEIVIKEAKTQV-EKGAEVLDVN----FGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYPGRSLF 410 (566)
T ss_dssp TTCCHHHHHHHHHHH-HTTCSEEEEE----CSSGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHCSSCCEE
T ss_pred cCCHHHHHHHHHHHH-HCCCCEEEEC----CCCCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhcCCCCEE
Q ss_pred EeeccCcCCCCccccHHHHHHHhCCcEEEcc
Q 040616 154 VRLEWSLRSRDVEEEIVPTCRELGIGIVAYS 184 (208)
Q Consensus 154 ~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~ 184 (208)
|-+.... ++ -.++++.++++|.+++.+.
T Consensus 411 Ndis~~~-~~--~~~~~~~~~~~g~~vV~m~ 438 (566)
T 1q7z_A 411 NSAKVDE-EE--LEMKINLLKKYGGTLIVLL 438 (566)
T ss_dssp EEEESCH-HH--HHHHHHHHHHHCCEEEEES
T ss_pred EECCcch-hh--HHHHHHHHHHhCCeEEEEe
No 247
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=26.33 E-value=2.6e+02 Score=23.03 Aligned_cols=115 Identities=5% Similarity=0.034 Sum_probs=68.5
Q ss_pred cCCCChHHHHHHHHHHHHHcCC------CcccEEEee-cCCCCCCHHHHHHHHHHHHHc-CC---cceEeeCc-ccHHHH
Q 040616 75 SYCGDPAYLRAACEASLKCLDV------DCIDLYYQH-RIDTKIPIEVTIGELKRLVEE-GK---IKHIDLSE-ASASTI 142 (208)
Q Consensus 75 ~~~~~~~~i~~~~~~sL~~L~~------d~iDl~~lh-~~~~~~~~~~~~~~l~~l~~~-G~---ir~iGvs~-~~~~~l 142 (208)
....+++.|.+++....+.++. ..++-+.+- .-+|....+.+.++++.+++. |. -|.+.+++ -....+
T Consensus 140 ~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGEPLln~d~v~~~i~~lk~~~Gl~~s~r~itlsTnG~~p~i 219 (404)
T 3rfa_A 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL 219 (404)
T ss_dssp EEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCGGGCHHHHHHHHHHHHSTTTTCCCGGGEEEEESCCHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCCcccCHHHHHHHHHHHHhhcCcCcCCCceEEECCCcHHHH
Confidence 3567899999999988887752 356666665 345555567889999999884 76 25666654 233456
Q ss_pred HHHhhcCCccEEeeccCcCCCC------------ccccHHHHH----HHhCC---cEEEcccCcccc
Q 040616 143 RRAHTIHPITVVRLEWSLRSRD------------VEEEIVPTC----RELGI---GIVAYSLLGRGF 190 (208)
Q Consensus 143 ~~~~~~~~~~~~q~~~~~~~~~------------~~~~~l~~~----~~~gi---~v~a~~pl~~G~ 190 (208)
.++.+... ..+.+.++-.+.. ..+.+++.+ ++.|. .+..-.++-.|.
T Consensus 220 ~~L~~~~d-~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~Gv 285 (404)
T 3rfa_A 220 DKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHV 285 (404)
T ss_dssp HHHHHHCC-CEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTT
T ss_pred HHHHHhhc-ceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCcccEEEEEEEecCC
Confidence 67666532 2333444433321 123444444 45566 666655665553
No 248
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=26.13 E-value=2.5e+02 Score=22.47 Aligned_cols=100 Identities=10% Similarity=-0.045 Sum_probs=62.7
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCc---ceEeeCcccHHHHHHHhhcCCccE
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKI---KHIDLSEASASTIRRAHTIHPITV 153 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i---r~iGvs~~~~~~l~~~~~~~~~~~ 153 (208)
.++.+...+-++. |+.+ .++.++-.|-+..+ ++.+.++.++-.+ -+.|=|-++...+.++ ....++
T Consensus 198 ~~~~~~a~~~~~~-l~~~----~~i~~iEqP~~~~d----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~ 266 (372)
T 3cyj_A 198 AYTRKQALYWAGA-FARE----AGISYLEEPVSSED----REGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AGCVDI 266 (372)
T ss_dssp CSCHHHHHHHHHH-HHHH----HCCCEEECSSCTTC----HHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HTTCSE
T ss_pred CCCHHHHHHHHHH-HHhh----cCCcEEECCCCccc----HHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hCCCCE
Confidence 3455554444433 4443 15667787754333 5566666665331 2444466777888887 566789
Q ss_pred EeeccCcCCC-CccccHHHHHHHhCCcEEEcccCc
Q 040616 154 VRLEWSLRSR-DVEEEIVPTCRELGIGIVAYSLLG 187 (208)
Q Consensus 154 ~q~~~~~~~~-~~~~~~l~~~~~~gi~v~a~~pl~ 187 (208)
+|+..+..-. ..-..+...|+++|+.++..+.++
T Consensus 267 i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~ 301 (372)
T 3cyj_A 267 LQADVTRCGGITGLLRVDGICRGHQIPFSAHCAPA 301 (372)
T ss_dssp EEECTTTTTHHHHHTTHHHHHHHHTCCEEECSCHH
T ss_pred EecCchhhCCHHHHHHHHHHHHHcCCeecccchHH
Confidence 9987776432 112489999999999999887643
No 249
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=25.86 E-value=54 Score=25.93 Aligned_cols=109 Identities=14% Similarity=0.126 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHHHHCCCCeEeCCCCCCCCch---hhhcce-EEEEeecceecCCCC------ccCCCChHHHHHHHHHH
Q 040616 21 KPESCMIALIHHAIDSGITVLDTSNVYGPHTN---EILLAR-VKLTTKFGIRYEDGK------YSYCGDPAYLRAACEAS 90 (208)
Q Consensus 21 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~---e~~~g~-~~i~tK~~~~~~~~~------~~~~~~~~~i~~~~~~s 90 (208)
.++++..+-++.-++.|-..+=.+.--| -+ ++.=|. ++|+-..+..+..|. .++...-+-+.+..++.
T Consensus 11 ~~r~~il~~l~~~i~~~~~iig~gaGtG--lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~ev 88 (286)
T 2p10_A 11 PTRSELVDRFQKKIRAGEPIIGGGAGTG--LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREV 88 (286)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEESSH--HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCceEEEecccc--hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhh
Confidence 4778889999999999988776543322 22 222233 777766665554332 12333444456666666
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCccc
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEAS 138 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 138 (208)
|-..+ + +-++. ..+...|...+...|+++++.|- -|+-||+
T Consensus 89 lp~v~-~-iPV~A--gv~~~DP~~~~g~~Le~lk~~Gf---~Gv~N~p 129 (286)
T 2p10_A 89 LPVVR-H-TPVLA--GVNGTDPFMVMSTFLRELKEIGF---AGVQNFP 129 (286)
T ss_dssp GGGCS-S-SCEEE--EECTTCTTCCHHHHHHHHHHHTC---CEEEECS
T ss_pred hccCC-C-CCEEE--EECCcCCCcCHHHHHHHHHHhCC---ceEEECC
Confidence 66664 2 33322 13444444556666688888884 5667776
No 250
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=25.73 E-value=25 Score=27.89 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=31.4
Q ss_pred CcCcccccccccccCCCCCC-----CHHHHHHHHHHHHHC-CCCeEeCCCCC
Q 040616 2 EVSGQGLRCMGMFAFYGPPK-----PESCMIALIHHAIDS-GITVLDTSNVY 47 (208)
Q Consensus 2 ~v~~lg~G~~~~~~~~~~~~-----~~~~~~~~l~~A~~~-Gi~~~DtA~~Y 47 (208)
+-|++|+|+|.++..+..-. ++....+.++.+-+. |+..++....+
T Consensus 6 ~~~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~~~ 57 (333)
T 3ktc_A 6 NYPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPF 57 (333)
T ss_dssp CCCCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESC
T ss_pred CCCcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecCCC
Confidence 35789999999986433210 123356778888999 99999875333
No 251
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=25.52 E-value=2.3e+02 Score=22.59 Aligned_cols=95 Identities=11% Similarity=-0.084 Sum_probs=52.5
Q ss_pred EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEe-ecCCC-CCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 59 VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQ-HRIDT-KIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 59 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~l-h~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
+-|..|+....... ...+.+... .+-+.|+..|+|+|++-.= ..+.. .....-.++...++++.=.+--++...
T Consensus 210 ~pv~vRls~~~~~~---~g~~~~~~~-~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~Gg 285 (340)
T 3gr7_A 210 GPLFVRISASDYHP---DGLTAKDYV-PYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGL 285 (340)
T ss_dssp SCEEEEEESCCCST---TSCCGGGHH-HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESS
T ss_pred CceEEEeccccccC---CCCCHHHHH-HHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCC
Confidence 34566776532100 112333333 3556678889777776421 01100 001111345556666655566677766
Q ss_pred c-cHHHHHHHhhcCCccEEeec
Q 040616 137 A-SASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 137 ~-~~~~l~~~~~~~~~~~~q~~ 157 (208)
. +++.++++++....|.+++-
T Consensus 286 I~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 286 ITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp CCCHHHHHHHHHTTSCSEEEEC
T ss_pred CCCHHHHHHHHHCCCeeEEEec
Confidence 4 78999999998878887773
No 252
>3ix3_A Transcriptional activator protein LASR; quorum sensing receptor, triphenyl mimics, DNA- binding, quorum sensing; HET: OHN; 1.40A {Pseudomonas aeruginosa} PDB: 3ix4_A* 3ix8_A* 3jpu_A* 2uv0_E*
Probab=25.44 E-value=1.7e+02 Score=20.30 Aligned_cols=82 Identities=10% Similarity=-0.040 Sum_probs=49.3
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhh---------
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHT--------- 147 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~--------- 147 (208)
..+.+.+.+.+.+..+.+|.+++=....+.+... .-+.+-++||+.+-.+...+
T Consensus 13 a~s~~~l~~~l~~~~~~~Gf~~~~y~~~~~~~~~-----------------~~~~~~~~nyP~~W~~~Y~~~~y~~~DPv 75 (173)
T 3ix3_A 13 SSGKLEWSAILQKMASDLGFSKILFGLLPKDSQD-----------------YENAFIVGNYPAAWREHYDRAGYARVDPT 75 (173)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSEEEEEEECTTCCC-----------------GGGSEEEECSCHHHHHHHHHTTGGGTCHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCeEEEEeecCCCCc-----------------ccceeEecCCCHHHHHHHHHCcCeecCch
Confidence 3567889999999999999998766666543211 11223355555544444332
Q ss_pred -------cCCccEEeeccCcCCCCccccHHHHHHHhCC
Q 040616 148 -------IHPITVVRLEWSLRSRDVEEEIVPTCRELGI 178 (208)
Q Consensus 148 -------~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi 178 (208)
..|+.+.... .....+..+++.++++|+
T Consensus 76 v~~~~~~~~P~~W~~~~---~~~~~~~~~~~~a~~~Gl 110 (173)
T 3ix3_A 76 VSHCTQSVLPIFWEPSI---YQTRKQHEFFEEASAAGL 110 (173)
T ss_dssp HHHHHHCSSCEECCGGG---CCSHHHHHHHHHHHHTTC
T ss_pred hhhhccCCCCeEeCccc---ccChhHHHHHHHHHHcCC
Confidence 2454444322 112224589999999987
No 253
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=25.40 E-value=2.4e+02 Score=23.72 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=60.4
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEee-cCCC-CCCHHH----HHHHHHHHHHcC-C---cceEeeCcccHHHHHHHhh
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQH-RIDT-KIPIEV----TIGELKRLVEEG-K---IKHIDLSEASASTIRRAHT 147 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~-~~~~~~----~~~~l~~l~~~G-~---ir~iGvs~~~~~~l~~~~~ 147 (208)
.+.+.+.+..++.+ .-|-|.||+=.-- +|.. ..+.++ +...++.++++. . =--|.|-+++++.++++++
T Consensus 209 ~~~~~al~~A~~mv-~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~ 287 (442)
T 3mcm_A 209 FDDNQRKLNLDELI-QSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILA 287 (442)
T ss_dssp SCCCHHHHHHHHHH-HHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHh
Confidence 34444444443332 3478999987432 2321 223333 344566666511 1 1258888999999999998
Q ss_pred --cCCcc-EEeeccCcCCCCccccHHHHHHHhCCcEEEccc
Q 040616 148 --IHPIT-VVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 148 --~~~~~-~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~p 185 (208)
.+..- +|=+.- .. ..++++.+++.|.+++.+.-
T Consensus 288 ~~aGa~i~INDVsg---~~--d~~m~~v~a~~g~~vVlMh~ 323 (442)
T 3mcm_A 288 KHHDIIWMINDVEC---NN--IEQKAQLIAKYNKKYVIIHN 323 (442)
T ss_dssp HHGGGCCEEEECCC---TT--HHHHHHHHHHHTCEEEEECC
T ss_pred hCCCCCEEEEcCCC---CC--ChHHHHHHHHhCCeEEEECC
Confidence 54333 444433 22 45899999999999998653
No 254
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=25.40 E-value=2.4e+02 Score=22.00 Aligned_cols=145 Identities=11% Similarity=0.093 Sum_probs=83.7
Q ss_pred HHHHHHHHHHCCCCeEeCCCCCCCCchhhhcceEEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEee
Q 040616 26 MIALIHHAIDSGITVLDTSNVYGPHTNEILLARVKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQH 105 (208)
Q Consensus 26 ~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh 105 (208)
..++-....++|+|..|.... . ...-|.+|...-+.... ...+.+.+++.++..-++++++ +.++
T Consensus 20 Va~Vs~~La~~g~NI~d~~q~-~----d~~~g~Ffmr~~~~~~~------~~~~~~~L~~~f~~la~~~~m~----~~l~ 84 (288)
T 3obi_A 20 VSAVSTFLFENGQNILDAQQY-N----DTESGHFFMRVVFNAAA------KVIPLASLRTGFGVIAAKFTMG----WHMR 84 (288)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE-E----ETTTTEEEEEEEEEESS------CCCCHHHHHHHHHHHHHHTTCE----EEEE
T ss_pred HHHHHHHHHHCCCcEEeeeee-e----cCCCCceEEEEEEEcCC------CCCCHHHHHHHHHHHHHHcCCE----EEee
Confidence 455555566999999997643 1 12224444433333211 1357889999999888888876 4455
Q ss_pred cCCCCC-------CHHHHHHHHHHHHHcCCcc---eEeeCcccHHHHHHHhhcCCccEEeeccCcCCCC-ccccHHHHHH
Q 040616 106 RIDTKI-------PIEVTIGELKRLVEEGKIK---HIDLSEASASTIRRAHTIHPITVVRLEWSLRSRD-VEEEIVPTCR 174 (208)
Q Consensus 106 ~~~~~~-------~~~~~~~~l~~l~~~G~ir---~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~l~~~~ 174 (208)
..+... .....+.+|-+..++|.+. ..=+||..++ +.++.+...+.+.+++....++. .+.++++..+
T Consensus 85 ~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~~-~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~ 163 (288)
T 3obi_A 85 DRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPRE-TFSGFDFGDIPFYHFPVNKDTRRQQEAAITALIA 163 (288)
T ss_dssp ETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCGG-GSCCTTTTTCCEEECCCCTTTHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCChh-HHHHHHHcCCCEEEeCCCcccHHHHHHHHHHHHH
Confidence 433211 1134567777777778652 2235776222 23334445566666655443332 2346899999
Q ss_pred HhCCcEEEcccC
Q 040616 175 ELGIGIVAYSLL 186 (208)
Q Consensus 175 ~~gi~v~a~~pl 186 (208)
+.++-++.-.-+
T Consensus 164 ~~~~Dlivlagy 175 (288)
T 3obi_A 164 QTHTDLVVLARY 175 (288)
T ss_dssp HHTCCEEEESSC
T ss_pred hcCCCEEEhhhh
Confidence 999888764444
No 255
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=25.03 E-value=1e+02 Score=24.47 Aligned_cols=106 Identities=9% Similarity=0.160 Sum_probs=58.6
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCC----CHHHHHHHHHHHHHcCC-cceEeeCcc------cHHHHHHHhh
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKI----PIEVTIGELKRLVEEGK-IKHIDLSEA------SASTIRRAHT 147 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~----~~~~~~~~l~~l~~~G~-ir~iGvs~~------~~~~l~~~~~ 147 (208)
..+.+..+++...+.- .==.+++...+... .....++.++.|+++|. |..||+-.| +++.+.+.++
T Consensus 147 G~~~i~~af~~Ar~~d---P~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~ 223 (313)
T 1v0l_A 147 GNDWIEVAFRTARAAD---PSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQ 223 (313)
T ss_dssp CTTHHHHHHHHHHHHC---TTSEEEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHH
T ss_pred hHHHHHHHHHHHHhhC---CCCEEEEeccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHH
Confidence 4667777777776642 11233344332221 12345777788999997 899999543 1334444433
Q ss_pred c---CCccEEeeccCcCCCCc--cccHHHHHHHhC--CcEEEcccCc
Q 040616 148 I---HPITVVRLEWSLRSRDV--EEEIVPTCRELG--IGIVAYSLLG 187 (208)
Q Consensus 148 ~---~~~~~~q~~~~~~~~~~--~~~~l~~~~~~g--i~v~a~~pl~ 187 (208)
. ....+.-.|+.+-.... -..+++.|.++. ++|+-|..-.
T Consensus 224 ~~a~~G~pv~iTEldi~~~qa~~y~~~~~~~~~~~~v~git~Wg~~D 270 (313)
T 1v0l_A 224 NFAALGVDVAITELDIQGAPASTYANVTNDCLAVSRCLGITVWGVRD 270 (313)
T ss_dssp HHHTTTCEEEEEEEEETTCCHHHHHHHHHHHHTCTTEEEEEESCSBG
T ss_pred HHHhcCCeEEEEeCCccHHHHHHHHHHHHHHHhcCCceEEEEECCCC
Confidence 2 22233333444432221 227889999886 6777777543
No 256
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=25.02 E-value=2.8e+02 Score=22.51 Aligned_cols=121 Identities=17% Similarity=0.101 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHHCCCCeEeCCCCCCCCchhhhcce----------------------------EEEEeecceecCCC
Q 040616 21 KPESCMIALIHHAIDSGITVLDTSNVYGPHTNEILLAR----------------------------VKLTTKFGIRYEDG 72 (208)
Q Consensus 21 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~----------------------------~~i~tK~~~~~~~~ 72 (208)
.+.+....+.+++-+.|+.+|=|.-... +-.++-+ ++|+|=.
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~---svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGm------- 144 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEE---SVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAG------- 144 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTT-------
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHH---HHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCC-------
Confidence 4667778888888899999986544322 2122211 4444332
Q ss_pred CccCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCC-CCHHH-HHHHHHHHHHcC-CcceEeeCcccH----HHHHHH
Q 040616 73 KYSYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTK-IPIEV-TIGELKRLVEEG-KIKHIDLSEASA----STIRRA 145 (208)
Q Consensus 73 ~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~-~~~~l~~l~~~G-~ir~iGvs~~~~----~~l~~~ 145 (208)
.+.+.+..+++-.++. |. ++.++|+.... .+.++ -+.++..|++.= -+ -||.|.|+. .....+
T Consensus 145 -----stl~Ei~~Ave~i~~~-g~---~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~l-pVG~SdHt~g~~~~~~~AA 214 (350)
T 3g8r_A 145 -----ARREDIDKVVSFMLHR-GK---DLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGV-RIGYSTHEDPDLMEPIMLA 214 (350)
T ss_dssp -----CCHHHHHHHHHHHHTT-TC---CEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTS-EEEEEECCCSSCCHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHc-CC---CEEEEecCCCCCCCcccCCHHHHHHHHHHCCCC-CEEcCCCCCCCccHHHHHH
Confidence 2678888888877764 42 79999986322 22333 266777777642 22 489998874 222344
Q ss_pred hhcCCccEEeeccCcCC
Q 040616 146 HTIHPITVVRLEWSLRS 162 (208)
Q Consensus 146 ~~~~~~~~~q~~~~~~~ 162 (208)
+..+- .+++-.+++-.
T Consensus 215 vAlGA-~vIEkH~tldr 230 (350)
T 3g8r_A 215 VAQGA-TVFEKHVGLPT 230 (350)
T ss_dssp HHTTC-CEEEEEBCCCB
T ss_pred HHcCC-CEEEEecCccc
Confidence 44443 46666666543
No 257
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=24.94 E-value=1.1e+02 Score=20.42 Aligned_cols=49 Identities=6% Similarity=0.024 Sum_probs=36.9
Q ss_pred cHHHHHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhCCcEEEcccCc
Q 040616 138 SASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAYSLLG 187 (208)
Q Consensus 138 ~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~ 187 (208)
+.++..++++..+|+++-+.+++-... ..++++..++++++++..+..+
T Consensus 41 ~g~eAl~~~~~~~~DlvllDi~mP~~~-G~el~~~lr~~~ipvI~lTa~~ 89 (123)
T 2lpm_A 41 RMQEALDIARKGQFDIAIIDVNLDGEP-SYPVADILAERNVPFIFATGYG 89 (123)
T ss_dssp CHHHHHHHHHHCCSSEEEECSSSSSCC-SHHHHHHHHHTCCSSCCBCTTC
T ss_pred CHHHHHHHHHhCCCCEEEEecCCCCCC-HHHHHHHHHcCCCCEEEEecCc
Confidence 556666666678899999999986654 3478888899999888766544
No 258
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=24.69 E-value=1.8e+02 Score=22.70 Aligned_cols=60 Identities=12% Similarity=0.053 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeC---cccHHHHHHHhh
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLS---EASASTIRRAHT 147 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs---~~~~~~l~~~~~ 147 (208)
+.+.+.+.++..++ .-+.+|++++..|... -.+...++.+.|| ++=+= ..+.++++++++
T Consensus 55 ~~~~ll~~~~~l~~--~~~~vD~V~I~tP~~~-----H~~~~~~al~aGk--hVl~EKPla~~~~ea~~l~~ 117 (312)
T 3o9z_A 55 EPEAFEAYLEDLRD--RGEGVDYLSIASPNHL-----HYPQIRMALRLGA--NALSEKPLVLWPEEIARLKE 117 (312)
T ss_dssp CHHHHHHHHHHHHH--TTCCCSEEEECSCGGG-----HHHHHHHHHHTTC--EEEECSSSCSCHHHHHHHHH
T ss_pred CHHHHHHHhhhhcc--cCCCCcEEEECCCchh-----hHHHHHHHHHCCC--eEEEECCCCCCHHHHHHHHH
Confidence 45555544444333 4467999999987542 1333445556675 44321 234555544443
No 259
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=24.62 E-value=1.4e+02 Score=22.50 Aligned_cols=63 Identities=13% Similarity=0.150 Sum_probs=38.6
Q ss_pred HHHcCCcceEeeCcccHHHHHHHhhcCC-ccEEeec-----cCcC-----------------CCCccccHHHHHHHhCCc
Q 040616 123 LVEEGKIKHIDLSEASASTIRRAHTIHP-ITVVRLE-----WSLR-----------------SRDVEEEIVPTCRELGIG 179 (208)
Q Consensus 123 l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~q~~-----~~~~-----------------~~~~~~~~l~~~~~~gi~ 179 (208)
+++.|.-..+=++.|+++.+..+.+..| +.+..+. .++. ......++++.++++|+.
T Consensus 135 l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~G~~ 214 (258)
T 2o55_A 135 VEKYHMQERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSMLFHYLTKEQVCTAHEKGLS 214 (258)
T ss_dssp HHTTTCGGGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCCTTHHHHHHHTTCSEEEEEGGGCCHHHHHHHHHTTCE
T ss_pred HHHcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCCHHHHHHHHHhcCCeEEecChhhcCHHHHHHHHHCCCE
Confidence 3445666777789999888777766432 1111111 0110 001224788999999999
Q ss_pred EEEccc
Q 040616 180 IVAYSL 185 (208)
Q Consensus 180 v~a~~p 185 (208)
|.+|.+
T Consensus 215 v~~wTv 220 (258)
T 2o55_A 215 VTVWMP 220 (258)
T ss_dssp EEEECC
T ss_pred EEEeeC
Confidence 999987
No 260
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=24.61 E-value=1.7e+02 Score=23.37 Aligned_cols=95 Identities=12% Similarity=-0.015 Sum_probs=52.7
Q ss_pred EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEE-eecCCCCC--CHHHHHHHHHHHHHcCCcceEeeC
Q 040616 59 VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYY-QHRIDTKI--PIEVTIGELKRLVEEGKIKHIDLS 135 (208)
Q Consensus 59 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~-lh~~~~~~--~~~~~~~~l~~l~~~G~ir~iGvs 135 (208)
+-|..|+...... ....+.+... .+-+.|+..|+|||++-. -..+.... .....++.+.++++.-.+--+++.
T Consensus 220 ~pV~vRls~~~~~---~~g~~~~~~~-~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~G 295 (349)
T 3hgj_A 220 LPLFVRVSATDWG---EGGWSLEDTL-AFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVG 295 (349)
T ss_dssp SCEEEEEESCCCS---TTSCCHHHHH-HHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECS
T ss_pred ceEEEEecccccc---CCCCCHHHHH-HHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEEC
Confidence 4467777653210 0123444443 355667888888777652 01111100 011134555566665455556665
Q ss_pred c-ccHHHHHHHhhcCCccEEeec
Q 040616 136 E-ASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 136 ~-~~~~~l~~~~~~~~~~~~q~~ 157 (208)
. ++++.++++++....|.+++-
T Consensus 296 gi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 296 LITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp SCCCHHHHHHHHHTTSCSEEEES
T ss_pred CCCCHHHHHHHHHCCCceEEEec
Confidence 5 478999999998878888763
No 261
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=24.54 E-value=94 Score=21.56 Aligned_cols=27 Identities=22% Similarity=0.183 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 110 KIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 110 ~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
..+...+++.|+.|.+.|.|+.+-+.+
T Consensus 58 ~is~aTVYR~L~~L~e~Glv~~~~~~~ 84 (150)
T 2xig_A 58 NTSISSVYRILNFLEKENFISVLETSK 84 (150)
T ss_dssp TCCHHHHHHHHHHHHHTTSEEEEEETT
T ss_pred CCCHhhHHHHHHHHHHCCcEEEEEeCC
Confidence 456788999999999999999998765
No 262
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=24.51 E-value=1.3e+02 Score=19.48 Aligned_cols=49 Identities=20% Similarity=0.175 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCCcceEe--------eCcc---cHHHHHHHhhcCC-ccEEeeccCcCCCCc
Q 040616 117 IGELKRLVEEGKIKHID--------LSEA---SASTIRRAHTIHP-ITVVRLEWSLRSRDV 165 (208)
Q Consensus 117 ~~~l~~l~~~G~ir~iG--------vs~~---~~~~l~~~~~~~~-~~~~q~~~~~~~~~~ 165 (208)
.+.-.+|+++|+++++- +|-| +.+++.+++..-| +-+.+++..++.+.+
T Consensus 28 ka~a~eLq~~G~~~~lWRv~G~y~nisIfdv~s~~eLh~iL~~LPLfpym~i~VtpL~~HP 88 (96)
T 1mli_A 28 KELAQRLQREGTWRHLWRIAGHYANYSVFDVPSVEALHDTLMQLPLFPYMDIEVDGLCRHP 88 (96)
T ss_pred HHHHHHHHhCCeeEEEEEecCCccEEEEEEcCCHHHHHHHHHhCCCCceEEEEEEEcccCC
Confidence 35567899999997654 1122 4567777777755 557788888887754
No 263
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=24.50 E-value=2.3e+02 Score=22.72 Aligned_cols=80 Identities=10% Similarity=0.076 Sum_probs=42.5
Q ss_pred HHHHHHCCCCeEeCCCCCCCCchhhhcce-EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcccEEEe-ecC
Q 040616 30 IHHAIDSGITVLDTSNVYGPHTNEILLAR-VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCIDLYYQ-HRI 107 (208)
Q Consensus 30 l~~A~~~Gi~~~DtA~~Yg~g~~e~~~g~-~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~l-h~~ 107 (208)
+....+.|++.|..-..-.....-+.+|. +.|+.-+.+.. -..+++.|++.+++.|+.++. .-.++-+ |..
T Consensus 269 l~~l~~~g~d~i~~d~~~dl~~a~~~~g~~~~l~Gnldp~~------L~gt~e~i~~~v~~~l~~~g~-~g~I~~~ghgi 341 (367)
T 1r3s_A 269 LEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCA------LYASEEEIGQLVKQMLDDFGP-HRYIANLGHGL 341 (367)
T ss_dssp HHHHTTSSCSEEECCTTSCHHHHHHHHCSSSEEEEEECGGG------GGSCHHHHHHHHHHHHHHHCS-SSEEEEESSCC
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHHcCCCeEEEeCCChHH------hcCCHHHHHHHHHHHHHHhCC-CCeeecCCCCC
Confidence 44445566666544211110112233454 66666655422 134788999999999998875 3334443 444
Q ss_pred CCCCCHHHH
Q 040616 108 DTKIPIEVT 116 (208)
Q Consensus 108 ~~~~~~~~~ 116 (208)
.+..+.+.+
T Consensus 342 ~~~~p~env 350 (367)
T 1r3s_A 342 YPDMDPEHV 350 (367)
T ss_dssp CTTCCHHHH
T ss_pred CCCCCHHHH
Confidence 555555443
No 264
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=24.02 E-value=90 Score=25.49 Aligned_cols=69 Identities=14% Similarity=-0.052 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCCCcccEEEeecCCCC--CCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 85 AACEASLKCLDVDCIDLYYQHRIDTK--IPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 85 ~~~~~sL~~L~~d~iDl~~lh~~~~~--~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
..+-+.|+..|+++|++ |..... .+....++.+.++++.=.+--++...++++..+++++....|.+++
T Consensus 259 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~ 329 (376)
T 1icp_A 259 LYMVESLNKYDLAYCHV---VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAY 329 (376)
T ss_dssp HHHHHHHGGGCCSEEEE---ECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---cCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEee
Confidence 34556778888766665 433111 0101123445566665556677777788999999999888888887
No 265
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=23.89 E-value=16 Score=25.44 Aligned_cols=10 Identities=20% Similarity=0.371 Sum_probs=8.8
Q ss_pred CeEeCCCCCC
Q 040616 39 TVLDTSNVYG 48 (208)
Q Consensus 39 ~~~DtA~~Yg 48 (208)
-||||+++|+
T Consensus 44 EFWDT~p~~~ 53 (137)
T 2ksn_A 44 EFWDTAPAFE 53 (137)
T ss_dssp HHHTTSSTTC
T ss_pred HHHhcCCccC
Confidence 4899999998
No 266
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=23.89 E-value=94 Score=24.27 Aligned_cols=19 Identities=5% Similarity=-0.139 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHcCCCcc
Q 040616 81 AYLRAACEASLKCLDVDCI 99 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~d~i 99 (208)
+.+.+.+-..++.-|...+
T Consensus 108 d~lL~~i~~~~e~~G~~vi 126 (283)
T 4ggi_A 108 DALLRRVLDEFEKEGFEIE 126 (283)
T ss_dssp THHHHHHHHHHHHTTCCCC
T ss_pred chhHHHHHHHHHhCCccee
Confidence 4456677777777775444
No 267
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=23.86 E-value=2.8e+02 Score=22.15 Aligned_cols=118 Identities=15% Similarity=0.084 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHH-HHcCCcceEeeCcccHHHHHHHhhcCCccEEeecc
Q 040616 80 PAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRL-VEEGKIKHIDLSEASASTIRRAHTIHPITVVRLEW 158 (208)
Q Consensus 80 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l-~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 158 (208)
.+...+.++...+.+|-+ +++ .-+.+...+.++..+.+..| .+-|. .|=---.+.+.+.++.+..++-+.--+
T Consensus 173 ~~~~~e~v~avr~a~g~~-~~l--~vDan~~~~~~~a~~~~~~l~~~~~i--~iE~P~~~~~~~~~l~~~~~iPI~~dE- 246 (371)
T 2ps2_A 173 PVTDAKRITAALANQQPD-EFF--IVDANGKLSVETALRLLRLLPHGLDF--ALEAPCATWRECISLRRKTDIPIIYDE- 246 (371)
T ss_dssp HHHHHHHHHHHTTTCCTT-CEE--EEECTTBCCHHHHHHHHHHSCTTCCC--EEECCBSSHHHHHHHHTTCCSCEEEST-
T ss_pred HHHHHHHHHHHHHhcCCC-CEE--EEECCCCcCHHHHHHHHHHHHhhcCC--cCcCCcCCHHHHHHHHhhCCCCEEeCC-
Confidence 444455566555556532 333 22333344566777777766 44443 443211144555555444332222222
Q ss_pred CcCCCCccccHHHHHHHhCCcEEEcccCcccccCCCCCcccchhhcCC
Q 040616 159 SLRSRDVEEEIVPTCRELGIGIVAYSLLGRGFLSSGPKLIHLSATKGC 206 (208)
Q Consensus 159 ~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~G~l~~~~~~~~~a~~~~~ 206 (208)
+..+ ..++.+..++..+.++...|---|-++.-..+.++|+++|+
T Consensus 247 ~~~~---~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 291 (371)
T 2ps2_A 247 LATN---EMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGY 291 (371)
T ss_dssp TCCS---HHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTC
T ss_pred CcCC---HHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCC
Confidence 2222 23566666677777777766654444444445667777665
No 268
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=23.79 E-value=42 Score=22.35 Aligned_cols=22 Identities=14% Similarity=0.036 Sum_probs=18.9
Q ss_pred cccHHHHHHHhCCcEEEcccCc
Q 040616 166 EEEIVPTCRELGIGIVAYSLLG 187 (208)
Q Consensus 166 ~~~~l~~~~~~gi~v~a~~pl~ 187 (208)
.++-+.||+++|+......|--
T Consensus 61 kE~AiayAek~G~~y~V~ep~~ 82 (106)
T 2jya_A 61 QEQAEAYAQRKGIEYRVILPKE 82 (106)
T ss_dssp HHHHHHHHHHHTCEEEECCCTT
T ss_pred HHHHHHHHHHcCCEEEEeCCCc
Confidence 3589999999999999988755
No 269
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=23.79 E-value=2e+02 Score=23.07 Aligned_cols=20 Identities=10% Similarity=0.132 Sum_probs=13.0
Q ss_pred ChHHHHHHHHHHHHHcCCCc
Q 040616 79 DPAYLRAACEASLKCLDVDC 98 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~ 98 (208)
+++++.+++++..+.+|+|.
T Consensus 310 tpe~va~~l~~~~~~~G~d~ 329 (376)
T 2i7g_A 310 EPELVAEKIIKAHGVFKNDR 329 (376)
T ss_dssp SHHHHHHHHHHHHHHHCCSE
T ss_pred CHHHHHHHHHHHHHhcCCCe
Confidence 56667777776666666443
No 270
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=23.73 E-value=3e+02 Score=22.52 Aligned_cols=88 Identities=13% Similarity=0.032 Sum_probs=50.3
Q ss_pred ccEEEeecCCCCCCHHHHHHHHH-HHHHcCCcceEeeCcccHHHHHHHhhc-CCccEEeeccCcCCCC-ccccHHHHHHH
Q 040616 99 IDLYYQHRIDTKIPIEVTIGELK-RLVEEGKIKHIDLSEASASTIRRAHTI-HPITVVRLEWSLRSRD-VEEEIVPTCRE 175 (208)
Q Consensus 99 iDl~~lh~~~~~~~~~~~~~~l~-~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~~~~~~~-~~~~~l~~~~~ 175 (208)
=|-+++..+. ...+...+. .+...| ++.+-+...+.+.++++++. .+..++....||.-.- ..+.+.+.|++
T Consensus 121 Gd~Vi~~~~~----y~~~~~~~~~~~~~~G-~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~ 195 (430)
T 3ri6_A 121 GDSVVTTDRL----FGHTLSLFQKTLPSFG-IEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHA 195 (430)
T ss_dssp TCEEEEETTC----CHHHHHHHHTHHHHTT-CEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHT
T ss_pred CCEEEEcCCC----chhHHHHHHHHHHHcC-CEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHH
Confidence 3555554432 234444444 223333 33333333377888887754 2334455556665433 23489999999
Q ss_pred hCCcEEEcccCccccc
Q 040616 176 LGIGIVAYSLLGRGFL 191 (208)
Q Consensus 176 ~gi~v~a~~pl~~G~l 191 (208)
+|+.++.=..++.|.+
T Consensus 196 ~g~~livD~a~~~~~~ 211 (430)
T 3ri6_A 196 KGIPLVVDTTMTPPYL 211 (430)
T ss_dssp TTCCEEEECTTSCTTT
T ss_pred cCCEEEEECCCccccc
Confidence 9999998777766654
No 271
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=23.71 E-value=96 Score=23.31 Aligned_cols=81 Identities=19% Similarity=0.265 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHcCCcceEeeCcccHH--HHHHHhhcCCccEEeeccCcCCC---C-----ccccHHHHHHHhCCcEEE
Q 040616 113 IEVTIGELKRLVEEGKIKHIDLSEASAS--TIRRAHTIHPITVVRLEWSLRSR---D-----VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 113 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~--~l~~~~~~~~~~~~q~~~~~~~~---~-----~~~~~l~~~~~~gi~v~a 182 (208)
...+.+.+..|++.|- .|.+.+|... .+.. +...+++.+-+.-+.... . .-..++..|++.|+.++|
T Consensus 138 ~~~~~~~l~~l~~~G~--~ialDdfG~g~ssl~~-L~~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~via 214 (259)
T 3s83_A 138 PERAAVILKTLRDAGA--GLALDDFGTGFSSLSY-LTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVA 214 (259)
T ss_dssp HHHHHHHHHHHHHHTC--EEEEECC---CHHHHH-HHHSCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCC--EEEEECCCCCchhHHH-HHhCCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEE
Confidence 3456778899999998 5555555432 2222 233567888776544321 1 123688999999999998
Q ss_pred cc---------------cCcccccCCCCC
Q 040616 183 YS---------------LLGRGFLSSGPK 196 (208)
Q Consensus 183 ~~---------------pl~~G~l~~~~~ 196 (208)
-. .+.+|.+..+|.
T Consensus 215 eGVEt~~~~~~l~~lG~~~~QG~~~~~p~ 243 (259)
T 3s83_A 215 EGVENAEMAHALQSLGCDYGQGFGYAPAL 243 (259)
T ss_dssp CCCCSHHHHHHHHHHTCCEECBTTTBCCB
T ss_pred EeCCCHHHHHHHHhcCCCEeecCcccCCC
Confidence 65 456676665554
No 272
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=23.66 E-value=99 Score=21.09 Aligned_cols=28 Identities=14% Similarity=0.351 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 109 TKIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 109 ~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
+..+...+++.|+.|.+.|.|+.+-+.+
T Consensus 44 ~~is~aTVYR~L~~L~e~Glv~~~~~~~ 71 (139)
T 3mwm_A 44 DAVGLTTVYRTLQSLADAGEVDVLRTAE 71 (139)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4567888999999999999999998743
No 273
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=23.57 E-value=1.5e+02 Score=19.01 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHcCCcceEe-------eCcccHHHHHHHhh
Q 040616 113 IEVTIGELKRLVEEGKIKHID-------LSEASASTIRRAHT 147 (208)
Q Consensus 113 ~~~~~~~l~~l~~~G~ir~iG-------vs~~~~~~l~~~~~ 147 (208)
...+.++|..|.++|.|...- |+..+.+.+.++.+
T Consensus 57 r~tVr~al~~L~~~GlI~~~~gG~~G~~V~~~~~~~~~~~~~ 98 (102)
T 2b0l_A 57 RSVIVNALRKLESAGVIESRSLGMKGTYIKVLNNKFLIELEN 98 (102)
T ss_dssp HHHHHHHHHHHHHTTSEEEEECSSSCEEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEeCCCCcEEEecCCHHHHHHHHH
Confidence 455789999999999997552 44566677666654
No 274
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=23.38 E-value=1.7e+02 Score=23.74 Aligned_cols=63 Identities=8% Similarity=-0.149 Sum_probs=39.7
Q ss_pred HHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 85 AACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 85 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
..+-+.|+..|+|||++ |...... +.+.++++.=.+--|+...++++..+++++....|.+.+
T Consensus 253 ~~la~~l~~~Gvd~i~v---~~~~~~~------~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 253 GHVARELGRRRIAFLFA---RESFGGD------AIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCCSTT------CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---CCCCCCH------HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 44566778888766665 5443111 122333333245566777789999999999887887776
No 275
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=23.36 E-value=2.3e+02 Score=23.14 Aligned_cols=93 Identities=12% Similarity=0.107 Sum_probs=61.2
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeec
Q 040616 78 GDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 78 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 157 (208)
.+.+...+|+.. |.+.|.|.+++= .+.++..+++.+.+++=.+=-++=-.|++..+.++++.. .+. ++
T Consensus 43 ~D~~atv~Qi~~-l~~aG~diVRva--------vp~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G-~dk--lR 110 (366)
T 3noy_A 43 HDVEATLNQIKR-LYEAGCEIVRVA--------VPHKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKG-VHG--IR 110 (366)
T ss_dssp TCHHHHHHHHHH-HHHTTCCEEEEE--------CCSHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTT-CSE--EE
T ss_pred cCHHHHHHHHHH-HHHcCCCEEEeC--------CCChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCe--EE
Confidence 455555555543 567788877773 223666889999988854444444468888888877652 233 66
Q ss_pred cCcCCCC---ccccHHHHHHHhCCcEEE
Q 040616 158 WSLRSRD---VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 158 ~~~~~~~---~~~~~l~~~~~~gi~v~a 182 (208)
+||-+-. .-+++++.|+++|+++-.
T Consensus 111 INPGNig~~~~~~~vv~~ak~~~~piRI 138 (366)
T 3noy_A 111 INPGNIGKEEIVREIVEEAKRRGVAVRI 138 (366)
T ss_dssp ECHHHHSCHHHHHHHHHHHHHHTCEEEE
T ss_pred ECCcccCchhHHHHHHHHHHHcCCCEEE
Confidence 6665542 123799999999998764
No 276
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=23.04 E-value=2.7e+02 Score=21.65 Aligned_cols=105 Identities=13% Similarity=0.030 Sum_probs=70.2
Q ss_pred CCCChHHHHHHHHHHHH-HcCCCcccEEEeecCCCC-CCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccE
Q 040616 76 YCGDPAYLRAACEASLK-CLDVDCIDLYYQHRIDTK-IPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITV 153 (208)
Q Consensus 76 ~~~~~~~i~~~~~~sL~-~L~~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~ 153 (208)
...+.++--+..+-..+ -+++++|-|-.+..+... .+..+++++.+.|+++|..-. =+++-++...+++.+..+ ++
T Consensus 82 g~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vl-py~~dd~~~akrl~~~G~-~a 159 (265)
T 1wv2_A 82 GCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVM-VYTSDDPIIARQLAEIGC-IA 159 (265)
T ss_dssp TCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEE-EEECSCHHHHHHHHHSCC-SE
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEE-EEeCCCHHHHHHHHHhCC-CE
Confidence 35667777777777888 889999999888655433 467899999999999997543 335656776666666543 55
Q ss_pred EeeccCcCCCC---ccccHHHHHHHh-CCcEEE
Q 040616 154 VRLEWSLRSRD---VEEEIVPTCREL-GIGIVA 182 (208)
Q Consensus 154 ~q~~~~~~~~~---~~~~~l~~~~~~-gi~v~a 182 (208)
++-.=.+.-.. ...++++..++. +++|++
T Consensus 160 VmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~ 192 (265)
T 1wv2_A 160 VMPLAGLIGSGLGICNPYNLRIILEEAKVPVLV 192 (265)
T ss_dssp EEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE
T ss_pred EEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE
Confidence 54322221111 123677777776 788887
No 277
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=22.94 E-value=47 Score=23.56 Aligned_cols=27 Identities=19% Similarity=0.239 Sum_probs=21.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCcceEeeC
Q 040616 109 TKIPIEVTIGELKRLVEEGKIKHIDLS 135 (208)
Q Consensus 109 ~~~~~~~~~~~l~~l~~~G~ir~iGvs 135 (208)
+..+...+++.|+.|.+.|.|+.+-+.
T Consensus 65 ~~is~aTVYRtL~~L~e~Glv~~i~~~ 91 (162)
T 4ets_A 65 LNVGIATVYRTLNLLEEAEMVTSISFG 91 (162)
T ss_dssp GCCCHHHHHHHHHHHHHTTSEEECC--
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 345678899999999999999998553
No 278
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=22.88 E-value=2.7e+02 Score=21.55 Aligned_cols=111 Identities=20% Similarity=0.219 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEeecCC--CCCCHHHHHHHHHHHHHcCCc---ceEeeCcccHHHHHHHhhcCCccEEe
Q 040616 81 AYLRAACEASLKCLDVDCIDLYYQHRID--TKIPIEVTIGELKRLVEEGKI---KHIDLSEASASTIRRAHTIHPITVVR 155 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~d~iDl~~lh~~~--~~~~~~~~~~~l~~l~~~G~i---r~iGvs~~~~~~l~~~~~~~~~~~~q 155 (208)
..+.+.+.+.+++.+.+.--+ .+--.+ ...+.+.+.+.+..|++.|-- .-+|....+...+.. .+++.+-
T Consensus 129 ~~~~~~l~~~l~~~~~~~~~l-~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ialDDFGtG~ssl~~L~~----l~~d~iK 203 (294)
T 2r6o_A 129 EHLTRAVDRALARSGLRPDCL-ELEITENVMLVMTDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQ----LPFHGLK 203 (294)
T ss_dssp GHHHHHHHHHHHHHCCCGGGE-EEEEEGGGGGGCCHHHHHHHHHHHHHTCEEEEEEETSSCBCHHHHHH----SCCCEEE
T ss_pred cHHHHHHHHHHHHcCCCcCEE-EEEEeCCchhhChHHHHHHHHHHHHCCCEEEEECCCCCchhHHHHHh----CCCCEEE
Confidence 345566667777766543222 222111 112346788899999999973 333433334444433 4677777
Q ss_pred eccCcCCCC--------ccccHHHHHHHhCCcEEEccc---------------CcccccCCCCC
Q 040616 156 LEWSLRSRD--------VEEEIVPTCRELGIGIVAYSL---------------LGRGFLSSGPK 196 (208)
Q Consensus 156 ~~~~~~~~~--------~~~~~l~~~~~~gi~v~a~~p---------------l~~G~l~~~~~ 196 (208)
+.-+....- .-..++..|++.|+.++|-.. +.+|.+..+|.
T Consensus 204 ID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEGVEt~~q~~~l~~lG~d~~QGy~~~~P~ 267 (294)
T 2r6o_A 204 IDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFGQGNLMSTPQ 267 (294)
T ss_dssp ECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHTTCCEECSTTTCCCE
T ss_pred ECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEecCCcHHHHHHHHHcCCCEEEcCccCCCC
Confidence 765543321 123588999999999998543 56677766654
No 279
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=22.85 E-value=93 Score=20.92 Aligned_cols=28 Identities=11% Similarity=0.272 Sum_probs=24.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 109 TKIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 109 ~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
+..+...+++.|+.|.+.|.|+.+-+.+
T Consensus 41 ~~is~~TVYR~L~~L~e~Glv~~~~~~~ 68 (131)
T 2o03_A 41 ENIGLTTVYRTLQSMASSGLVDTLHTDT 68 (131)
T ss_dssp CCCCHHHHHHHHHHHHTTTSEEEEECTT
T ss_pred CCCCHhhHHHHHHHHHHCCCEEEEEeCC
Confidence 4567888999999999999999998765
No 280
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=22.70 E-value=1.2e+02 Score=23.94 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHcCC--CcccEEEeecCC
Q 040616 83 LRAACEASLKCLDV--DCIDLYYQHRID 108 (208)
Q Consensus 83 i~~~~~~sL~~L~~--d~iDl~~lh~~~ 108 (208)
+.+.+++.|++.|+ +-||.+.+|.++
T Consensus 226 ~~~~i~~~l~~~gl~~~did~~v~Hq~~ 253 (323)
T 3il3_A 226 LSNVVEETLLANNLDKKDLDWLVPHQAN 253 (323)
T ss_dssp HHHHHHHHHHTTTCCTTTCCEEEECCSC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 55677888887764 578999999875
No 281
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=22.67 E-value=78 Score=19.66 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHHcCCcceEe
Q 040616 112 PIEVTIGELKRLVEEGKIKHID 133 (208)
Q Consensus 112 ~~~~~~~~l~~l~~~G~ir~iG 133 (208)
+...+-+.|..|.++|+|..+|
T Consensus 40 sr~tV~~~L~~Le~~G~I~~~g 61 (81)
T 1qbj_A 40 PKKEINRVLYSLAKKGKLQKEA 61 (81)
T ss_dssp CHHHHHHHHHHHHHTTSEEEES
T ss_pred CHHHHHHHHHHHHHCCCEEecC
Confidence 3456788999999999999988
No 282
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=22.61 E-value=1.1e+02 Score=19.05 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=23.1
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 107 IDTKIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 107 ~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
.|...++..+.+.|+.+++.|.- .||+.+
T Consensus 64 aD~~~~y~~vv~vmd~l~~aG~~-~v~l~t 92 (99)
T 2pfu_A 64 ADKTVDYETLMKVMDTLHQAGYL-KIGLVG 92 (99)
T ss_dssp ECTTCCHHHHHHHHHHHHHTCCC-CEECTT
T ss_pred cCCCCCHHHHHHHHHHHHHcCCC-eEEEEe
Confidence 46778899999999999999864 456654
No 283
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=22.59 E-value=2.1e+02 Score=20.35 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHh
Q 040616 113 IEVTIGELKRLVEEGKIKHIDLSEASASTIRRAH 146 (208)
Q Consensus 113 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 146 (208)
+..+.+.|+.|+++|.--+| +||.....+.++.
T Consensus 38 ~pg~~e~L~~L~~~g~~~~i-~T~~~~~~~~~~~ 70 (196)
T 2oda_A 38 TPGAQNALKALRDQGMPCAW-IDELPEALSTPLA 70 (196)
T ss_dssp CTTHHHHHHHHHHHTCCEEE-ECCSCHHHHHHHH
T ss_pred CcCHHHHHHHHHHCCCEEEE-EcCChHHHHHHhc
Confidence 35566777777777764444 3444444444433
No 284
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=22.54 E-value=91 Score=21.49 Aligned_cols=52 Identities=19% Similarity=0.148 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCCCcccEEEeec----CCCCCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 83 LRAACEASLKCLDVDCIDLYYQHR----IDTKIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 83 i~~~~~~sL~~L~~d~iDl~~lh~----~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
-|.++-+.|..-+ ++...-++. -.+..+...+++.|+.|.+.|.|+.+-+.+
T Consensus 20 qR~~Il~~l~~~~--h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~i~~~~ 75 (145)
T 3eyy_A 20 QRQLVLEAVDTLE--HATPDDILGEVRKTASGINISTVYRTLELLEELGLVSHAHLGH 75 (145)
T ss_dssp HHHHHHHHHHHHS--SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEEEECGG
T ss_pred HHHHHHHHHHhcC--CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCcEEEEEeCC
Confidence 3455555554443 444333322 234567888999999999999999998654
No 285
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.52 E-value=1.8e+02 Score=19.34 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=39.6
Q ss_pred HHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc---CCcceEeeCcc-cHHHHHHHhhcCCccEEeeccC
Q 040616 90 SLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE---GKIKHIDLSEA-SASTIRRAHTIHPITVVRLEWS 159 (208)
Q Consensus 90 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~~~ 159 (208)
.++.+....+|++++....+..+ -++.+..+++. ..+.-|-++.. +.+...++.+.+..+++.-+++
T Consensus 43 al~~l~~~~~dlii~D~~l~~~~---g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~ 113 (154)
T 3gt7_A 43 AVRFLSLTRPDLIISDVLMPEMD---GYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCK 113 (154)
T ss_dssp HHHHHTTCCCSEEEEESCCSSSC---HHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCC
T ss_pred HHHHHHhCCCCEEEEeCCCCCCC---HHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCC
Confidence 34444556689999986544433 34555566655 35666777653 4556666766665555554433
No 286
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=22.48 E-value=86 Score=21.94 Aligned_cols=44 Identities=5% Similarity=0.077 Sum_probs=29.5
Q ss_pred HHHHHHHHHcCCCc--ccEEEeecCCCCC-CHHHHHHHHHHHHHcCC
Q 040616 85 AACEASLKCLDVDC--IDLYYQHRIDTKI-PIEVTIGELKRLVEEGK 128 (208)
Q Consensus 85 ~~~~~sL~~L~~d~--iDl~~lh~~~~~~-~~~~~~~~l~~l~~~G~ 128 (208)
..+.+.|+.+.... +|.+++...+.-. ...+....++.+.+.|.
T Consensus 60 p~l~~ll~~~~~g~~~~d~lvv~~ldRl~R~~~~~~~~~~~l~~~gv 106 (167)
T 3guv_A 60 IQFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQIMQDYGV 106 (167)
T ss_dssp HHHHHHHHHHHTCTTCCSEEEESCGGGTCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCCccEEEEEeCchhcCCHHHHHHHHHHHHHCCC
Confidence 34555555555444 8999998876543 35677788888877764
No 287
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=22.45 E-value=93 Score=21.36 Aligned_cols=28 Identities=14% Similarity=0.395 Sum_probs=24.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCcceEeeCc
Q 040616 109 TKIPIEVTIGELKRLVEEGKIKHIDLSE 136 (208)
Q Consensus 109 ~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 136 (208)
+..+...+++.|+.|.+.|.|+.+-..+
T Consensus 52 ~~is~aTVYR~L~~L~e~Glv~~~~~~~ 79 (145)
T 2fe3_A 52 PNMSVATVYNNLRVFRESGLVKELTYGD 79 (145)
T ss_dssp TTCCHHHHHHHHHHHHHTTSEEEECCTT
T ss_pred CCCChhhHHHHHHHHHHCCCEEEEeeCC
Confidence 3466788999999999999999998765
No 288
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=22.41 E-value=2.4e+02 Score=22.68 Aligned_cols=70 Identities=14% Similarity=0.066 Sum_probs=41.3
Q ss_pred HHHHHHHcCCCcccEEEee-cCCCCC--CHHHHHHHHHHHHHcCCcceEeeCcc-cHHHHHHHhhcCCccEEee
Q 040616 87 CEASLKCLDVDCIDLYYQH-RIDTKI--PIEVTIGELKRLVEEGKIKHIDLSEA-SASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 87 ~~~sL~~L~~d~iDl~~lh-~~~~~~--~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~ 156 (208)
+-+.|+..|+|||++-.-. .+.... .....++.+..+++.=.+--+++... +++.++++++....|.+++
T Consensus 251 la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 251 LARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp HHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEe
Confidence 4456788888887775421 111000 00112344455555445666666664 7899999998887787776
No 289
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=22.16 E-value=1.4e+02 Score=23.42 Aligned_cols=28 Identities=18% Similarity=0.286 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCC--CcccEEEeecCC
Q 040616 81 AYLRAACEASLKCLDV--DCIDLYYQHRID 108 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~--d~iDl~~lh~~~ 108 (208)
+.+.+.+++.|++.|+ +-||.+.+|.++
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq~~ 263 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIPHQAN 263 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCSC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 4567788889988775 468899999874
No 290
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=22.01 E-value=1.3e+02 Score=23.73 Aligned_cols=45 Identities=22% Similarity=0.258 Sum_probs=27.3
Q ss_pred cHHHHHHHhhcCCccEEeeccCcCCCC---------ccccHHHHHHHhCCcEEE
Q 040616 138 SASTIRRAHTIHPITVVRLEWSLRSRD---------VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 138 ~~~~l~~~~~~~~~~~~q~~~~~~~~~---------~~~~~l~~~~~~gi~v~a 182 (208)
+.+.+..+.+...+.++-+..++.... .-+.++++|.++||.|+.
T Consensus 70 ~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vil 123 (327)
T 3pzt_A 70 NKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGIYVII 123 (327)
T ss_dssp SHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 345566655444555666555432211 114789999999999884
No 291
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=22.00 E-value=1e+02 Score=23.10 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHcCCcceEeeCcccH--HHHHHHhhcCCccEEeeccCcCCC---C-----ccccHHHHHHHhCCcEEE
Q 040616 113 IEVTIGELKRLVEEGKIKHIDLSEASA--STIRRAHTIHPITVVRLEWSLRSR---D-----VEEEIVPTCRELGIGIVA 182 (208)
Q Consensus 113 ~~~~~~~l~~l~~~G~ir~iGvs~~~~--~~l~~~~~~~~~~~~q~~~~~~~~---~-----~~~~~l~~~~~~gi~v~a 182 (208)
...+.+.+..|++.|- .|.+.+|.. ..+..+ ...+++.+-+.-+.... . .-..++..|++.|+.++|
T Consensus 142 ~~~~~~~l~~L~~~G~--~ialDdfG~g~s~l~~L-~~l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~via 218 (250)
T 4f3h_A 142 LRNAQQFLASVSAMGC--KVGLEQFGSGLDSFQLL-AHFQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVA 218 (250)
T ss_dssp HHHHHHHHHHHHTTTC--EEEEEEETSSTHHHHHH-TTSCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHCCC--EEEEeCCCCCchHHHHH-hhCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEE
Confidence 3456778888888887 455544432 223333 33567888776443321 1 123688999999999998
Q ss_pred cc
Q 040616 183 YS 184 (208)
Q Consensus 183 ~~ 184 (208)
-.
T Consensus 219 eG 220 (250)
T 4f3h_A 219 EF 220 (250)
T ss_dssp CC
T ss_pred ec
Confidence 54
No 292
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=21.86 E-value=2.8e+02 Score=21.39 Aligned_cols=65 Identities=8% Similarity=-0.011 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHc-CCcceEeeCcccH------HHHHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhCCcEE
Q 040616 115 VTIGELKRLVEE-GKIKHIDLSEASA------STIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIGIV 181 (208)
Q Consensus 115 ~~~~~l~~l~~~-G~ir~iGvs~~~~------~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~ 181 (208)
.+++.+.+++++ -.+--+.++-+++ +...+.......+.+-+.--|... ..++.+.|+++|+.++
T Consensus 81 ~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee--~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 81 DCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEE--SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGG--CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhh--HHHHHHHHHHcCCeEE
Confidence 456777777766 3455445544454 333333322333444443222222 3478888888888754
No 293
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.83 E-value=1.9e+02 Score=25.04 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhc
Q 040616 80 PAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTI 148 (208)
Q Consensus 80 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~ 148 (208)
.....+++.+.|+.||.++ |-.... ...++...+.+++|.++|+.- +|..+.+++.+....
T Consensus 144 ~~e~~~~I~edL~wLGl~w-d~~~~q----Sdr~~~y~~~~~~Li~~G~AY---~c~cs~eei~~~r~~ 204 (553)
T 3aii_A 144 DPEAYDMIPADLEWLGVEW-DETVIQ----SDRMETYYEYTEKLIERGGAY---VCTCRPEEFRELKNR 204 (553)
T ss_dssp CTTHHHHHHHHHHHHTCCC-SEEEEG----GGGHHHHHHHHHHHHHTTSEE---EECSCHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHcCCCC-CCCccc----ccCHHHHHHHHHHHHHcCCce---eCCCCHHHHHHHhhc
Confidence 3456788889999999998 754322 245678889999999999965 366677777765443
No 294
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=21.73 E-value=3.5e+02 Score=22.51 Aligned_cols=146 Identities=15% Similarity=0.119 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHHC-CCCeEeCCCCCCCCchhhhcceEEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcc
Q 040616 21 KPESCMIALIHHAIDS-GITVLDTSNVYGPHTNEILLARVKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCI 99 (208)
Q Consensus 21 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~e~~~g~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~i 99 (208)
.+.++..+..+.+++. |++.|= .|++. .+++.-.+.++...+.+ +-+
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~K--------------------lKvG~----------~~~~~Di~~v~avRea~--~~~ 237 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIK--------------------LKGGV----------FPPADEVAAIKALHKAF--PGV 237 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEE--------------------EECSS----------SCHHHHHHHHHHHHHHS--TTC
T ss_pred CCHHHHHHHHHHHHHhcCCCEEE--------------------EccCC----------CCHHHHHHHHHHHHHhC--CCC
Confidence 4567677777777764 888652 13332 23444455677777777 434
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhCCc
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIG 179 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~ 179 (208)
+| +.+.+...+..++.+.+.+|.+- +..|==-..+.+.+.++.+..++-+.--+ +.... .++.++.+...+.
T Consensus 238 ~L--~vDaN~~w~~~~Ai~~~~~L~~~--l~~iEeP~~d~~~~~~l~~~~~iPIa~dE-~~~~~---~~~~~~i~~~a~d 309 (445)
T 3va8_A 238 PL--RLDPNAAWTVETSKWVAKELEGI--VEYLEDPAGEIEGMAAVAKEASMPLATNM-AVVAF---DHLPPSILQDAVQ 309 (445)
T ss_dssp CE--EEECTTCBCHHHHHHHHHHTTTT--CSEEESCBSHHHHHHHHHTTCSSCEEESS-SCCSG---GGHHHHHHTTCCS
T ss_pred cE--eeeCCCCCCHHHHHHHHHHHhhh--cCeEeecCcCHHHHHHHHHcCCCCEEeCC-ccCCH---HHHHHHHHcCCCC
Confidence 54 34555556678877777766543 55444332355666666665432222222 23322 4778888888899
Q ss_pred EEEcccCcccccCCCCCcccchhhcCC
Q 040616 180 IVAYSLLGRGFLSSGPKLIHLSATKGC 206 (208)
Q Consensus 180 v~a~~pl~~G~l~~~~~~~~~a~~~~~ 206 (208)
++.-.+--.|=++.-.++..+|+.+|+
T Consensus 310 iv~~d~~~~GGitea~kia~lA~~~gv 336 (445)
T 3va8_A 310 VILSDHHFWGGLRKSQTLASICATWGL 336 (445)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHHTC
T ss_pred EEEecchhcCCHHHHHHHHHHHHHcCC
Confidence 888776544444445556777777775
No 295
>1a6f_A RNAse P protein, ribonuclease P protein; endonuclease, subunit; 2.60A {Bacillus subtilis} SCOP: d.14.1.2
Probab=21.63 E-value=1.5e+02 Score=19.65 Aligned_cols=62 Identities=13% Similarity=0.129 Sum_probs=42.1
Q ss_pred hhcceEEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCC---CcccEEEeecCCC-CCCHHHHHHHHHHHHHc
Q 040616 54 ILLARVKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDV---DCIDLYYQHRIDT-KIPIEVTIGELKRLVEE 126 (208)
Q Consensus 54 ~~~g~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~---d~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~ 126 (208)
..+| +.|+-|++. ...++.+++.+.++.+...- .. |++++-.+.. ..++.++.+.|..+.+.
T Consensus 44 ~RvG-~sVsKKvg~---------AV~RNRiKR~lRE~~R~~~~~l~~~-d~Vviar~~~~~~~~~~l~~~l~~ll~k 109 (119)
T 1a6f_A 44 LRVG-LSVSKKIGN---------AVMRNRIKRLIRQAFLEEKERLKEK-DYIIIARKPASQLTYEETKKSLQHLFRK 109 (119)
T ss_dssp CEEE-EEECSTTCC---------HHHHHHHHHHHHHHHHHHTTTBCSS-EEEEEECGGGTTCCHHHHHHHHHHHHHH
T ss_pred cEEE-EEEecccCc---------chhHhHHHHHHHHHHHHhhccCCCC-CEEEEEECCcccCCHHHHHHHHHHHHHH
Confidence 3444 677777764 35677888888888765532 34 9999987653 46778888888776543
No 296
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=21.60 E-value=1.4e+02 Score=24.02 Aligned_cols=28 Identities=21% Similarity=0.256 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHcCC--CcccEEEeecCC
Q 040616 81 AYLRAACEASLKCLDV--DCIDLYYQHRID 108 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~--d~iDl~~lh~~~ 108 (208)
+.+.+.+++.|++.|+ +-||.+++|..+
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~n 295 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLHQAN 295 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 3456778888988775 568999999864
No 297
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=21.58 E-value=91 Score=18.27 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=17.5
Q ss_pred CCHHHHHHHHHHHHHcCCcce
Q 040616 111 IPIEVTIGELKRLVEEGKIKH 131 (208)
Q Consensus 111 ~~~~~~~~~l~~l~~~G~ir~ 131 (208)
.+...+|+.+..|+++|.|..
T Consensus 37 lsr~tv~~~l~~L~~~G~I~~ 57 (67)
T 2heo_A 37 VPKKTLNQVLYRLKKEDRVSS 57 (67)
T ss_dssp SCHHHHHHHHHHHHHTTSEEE
T ss_pred cCHHHHHHHHHHHHHCCcEec
Confidence 345778999999999999864
No 298
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=21.53 E-value=3.5e+02 Score=22.48 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHHHHC-CCCeEeCCCCCCCCchhhhcceEEEEeecceecCCCCccCCCChHHHHHHHHHHHHHcCCCcc
Q 040616 21 KPESCMIALIHHAIDS-GITVLDTSNVYGPHTNEILLARVKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCLDVDCI 99 (208)
Q Consensus 21 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~e~~~g~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~i 99 (208)
.+.++..+..+.+++. |++.|= .|++. .+++.=.+.++...+.+ +-+
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~K--------------------lKvG~----------~~~~~Di~~v~avRea~--~d~ 239 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIK--------------------LKGGV----------FAPEEEMAAVEALRAAF--PDH 239 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEE--------------------EECSS----------SCHHHHHHHHHHHHHHC--TTS
T ss_pred CCHHHHHHHHHHHHHhcCCCEEE--------------------ECCCC----------CCHHHHHHHHHHHHHhC--CCC
Confidence 4567777777777764 888652 13332 23444455667777777 335
Q ss_pred cEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEeeccCcCCCCccccHHHHHHHhCCc
Q 040616 100 DLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRLEWSLRSRDVEEEIVPTCRELGIG 179 (208)
Q Consensus 100 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~ 179 (208)
+|. -+.+...+..++.+.+.+|.+- +..|==-..+.+.+.++.+..++-+.--+ +.... .++.++.+...+.
T Consensus 240 ~L~--vDaN~~w~~~~Ai~~~~~L~~~--l~~iEeP~~~~~~~~~l~~~~~iPIa~dE-~~~~~---~~~~~~l~~~a~d 311 (445)
T 3vdg_A 240 PLR--LDPNAAWTPQTSVKVAAGLEGV--LEYLEDPTPGLDGMAEVAAQAPMPLATNM-CVVAF---DQLPAAVAKNSVQ 311 (445)
T ss_dssp CEE--EECTTCSCHHHHHHHHHHTTTT--CSEEECCSSSHHHHHHHHHHCSSCEEESS-SCCSG---GGHHHHHHHTCCS
T ss_pred cEE--EECCCCCCHHHHHHHHHHHhhH--HHeeeCCCCCHHHHHHHHhcCCCCEEcCC-cCCCH---HHHHHHHHcCCCC
Confidence 543 4455556678887777777543 55554333456666666665432222222 23222 4778888888899
Q ss_pred EEEcccCcccccCCCCCcccchhhcCC
Q 040616 180 IVAYSLLGRGFLSSGPKLIHLSATKGC 206 (208)
Q Consensus 180 v~a~~pl~~G~l~~~~~~~~~a~~~~~ 206 (208)
++.-.+--.|=++.-.++..+|+.+|+
T Consensus 312 iv~~d~~~~GGitea~kia~lA~~~gv 338 (445)
T 3vdg_A 312 VVLSDHHYWGGLQRSRLLAGICDTFGL 338 (445)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHHTC
T ss_pred EEeeCcceeCCHHHHHHHHHHHHHcCC
Confidence 888776554445545556777777775
No 299
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=21.43 E-value=1.7e+02 Score=18.76 Aligned_cols=59 Identities=12% Similarity=0.070 Sum_probs=33.3
Q ss_pred CcccEEEeecCCCCCCHHHHHHHHHHHHH---cCCcceEeeCcc-cHHHHHHHhhcCCccEEeecc
Q 040616 97 DCIDLYYQHRIDTKIPIEVTIGELKRLVE---EGKIKHIDLSEA-SASTIRRAHTIHPITVVRLEW 158 (208)
Q Consensus 97 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~---~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~~ 158 (208)
...|++++...-+..+ .++.+..+++ .-.+.-|-+++. +.+...++.+....+++.-++
T Consensus 53 ~~~dlii~d~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~ 115 (143)
T 3cnb_A 53 VKPDVVMLDLMMVGMD---GFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPL 115 (143)
T ss_dssp TCCSEEEEETTCTTSC---HHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSC
T ss_pred cCCCEEEEecccCCCc---HHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCC
Confidence 3479999886544333 3455555555 234566777664 344556666665555554433
No 300
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=21.30 E-value=2.9e+02 Score=22.40 Aligned_cols=63 Identities=10% Similarity=-0.049 Sum_probs=42.4
Q ss_pred HHHHHHHHcCCCcccEEEeecCC---CCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 86 ACEASLKCLDVDCIDLYYQHRID---TKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 86 ~~~~sL~~L~~d~iDl~~lh~~~---~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
.+-+.|+..|+++|++ |... +..+. + +.++++.=.+--|++..++++..+++++....|.+++
T Consensus 270 ~la~~l~~~Gvd~i~v---~~~~~~~~~~~~----~-~~~ir~~~~iPvi~~G~it~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 270 HLCKKIEPLSLAYLHY---LRGDMVNQQIGD----V-VAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp HHHHHHGGGCCSEEEE---ECSCTTSCCCCC----H-HHHHHTTCCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHhCCCEEEE---cCCCcCCCCccH----H-HHHHHHHCCCcEEEECCCCHHHHHHHHHcCCCeEEEe
Confidence 4456677888776665 4321 11121 4 5666666566677777788999999999888888887
No 301
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=21.22 E-value=3e+02 Score=21.46 Aligned_cols=104 Identities=13% Similarity=0.235 Sum_probs=57.5
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEE-EeecCCCCC----CHHHHHHHHHHHHHcCC-cceEeeCcc----cHHHHHHHhhc
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLY-YQHRIDTKI----PIEVTIGELKRLVEEGK-IKHIDLSEA----SASTIRRAHTI 148 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~-~lh~~~~~~----~~~~~~~~l~~l~~~G~-ir~iGvs~~----~~~~l~~~~~~ 148 (208)
.++.++.+++...+.- . +.- ++...+... ......+.++.|+++|. |..||+-.| .++.+.+.++.
T Consensus 149 g~~~i~~af~~Ar~~d---P-~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~ 224 (303)
T 1i1w_A 149 GEDYIPIAFQTARAAD---P-NAKLYINDYNLDSASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPL 224 (303)
T ss_dssp CTTHHHHHHHHHHHHC---T-TSEEEEEESSCCCSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC---C-CCeEEeccccccCCChHHHHHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHH
Confidence 3566777777666542 1 222 233222111 12356777888999997 899998432 34555555443
Q ss_pred ---CCc-cEEeeccCcCCCCcc--ccHHHHHHHhC--CcEEEcccC
Q 040616 149 ---HPI-TVVRLEWSLRSRDVE--EEIVPTCRELG--IGIVAYSLL 186 (208)
Q Consensus 149 ---~~~-~~~q~~~~~~~~~~~--~~~l~~~~~~g--i~v~a~~pl 186 (208)
... .+.-.|+.+-....+ ..+++.|.++. ++++-|+.-
T Consensus 225 ~a~~G~~pi~iTEldi~~~qa~~y~~~~~~~~~~~~v~git~Wg~~ 270 (303)
T 1i1w_A 225 LASAGTPEVAITELDVAGASSTDYVNVVNACLNVSSCVGITVWGVA 270 (303)
T ss_dssp HHTTCCSEEEEEEEEETTCCHHHHHHHHHHHHHCTTEEEEEESCSB
T ss_pred HHHCCCCeEEEEeCCccchHHHHHHHHHHHHHhCCCceEEEEEcCC
Confidence 222 333334444333222 27888898876 677777644
No 302
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=21.18 E-value=1.9e+02 Score=20.07 Aligned_cols=62 Identities=16% Similarity=-0.044 Sum_probs=42.3
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHH
Q 040616 77 CGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRA 145 (208)
Q Consensus 77 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~ 145 (208)
..+.+.+.+.+++.|+..+.+.-++-.+..++...+-....+.-+++ | +-+-.|+.++|.+.
T Consensus 21 g~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~l---g----~pl~~~~~eeL~~v 82 (145)
T 2w6k_A 21 GCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLL---E----RPVHFLAPAVLHDY 82 (145)
T ss_dssp TCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHH---T----SCEEEECHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHh---C----CCcEEeCHHHHhhc
Confidence 56899999999999999999888888888877665434344433333 1 22334566766654
No 303
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=21.09 E-value=1.4e+02 Score=20.45 Aligned_cols=17 Identities=12% Similarity=0.237 Sum_probs=11.7
Q ss_pred CHHHHHHHHHHHHHcCC
Q 040616 112 PIEVTIGELKRLVEEGK 128 (208)
Q Consensus 112 ~~~~~~~~l~~l~~~G~ 128 (208)
...++.+.|++|++.|.
T Consensus 28 ~~~g~~~~l~~L~~~g~ 44 (179)
T 3l8h_A 28 ALPGSLQAIARLTQADW 44 (179)
T ss_dssp BCTTHHHHHHHHHHTTC
T ss_pred ECcCHHHHHHHHHHCCC
Confidence 34566777777777775
No 304
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=20.96 E-value=2.1e+02 Score=23.23 Aligned_cols=63 Identities=10% Similarity=-0.130 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHhhcCCccEEee
Q 040616 85 AACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAHTIHPITVVRL 156 (208)
Q Consensus 85 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 156 (208)
..+-+.|+..|+|+|++ |...... + ...++++.=.+--|+...++++..+++++....|.+.+
T Consensus 245 ~~la~~l~~~Gvd~i~v---~~~~~~~---~---~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 245 TYVARELGKRGIAFICS---REREADD---S---IGPLIKEAFGGPYIVNERFDKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCCCTT---C---CHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHhCCCEEEE---CCCCCCH---H---HHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 45666778888766664 5443111 1 22333333235566777778999999999887887776
No 305
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A*
Probab=20.96 E-value=1.8e+02 Score=22.83 Aligned_cols=58 Identities=10% Similarity=-0.027 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHH
Q 040616 81 AYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRA 145 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~ 145 (208)
+...+++.+.|+.||+++=.-..... ...+...+++++|.++|++- .|..+.+++++.
T Consensus 54 ~~~~~~I~~dL~~LGl~~D~~~~~qS----er~~~y~~~~~~L~~~G~aY---~c~ct~~~l~~~ 111 (298)
T 1nzj_A 54 PGAAETILRQLEHYGLHWDGDVLWQS----QRHDAYREALAWLHEQGLSY---YCTCTRARIQSI 111 (298)
T ss_dssp TTHHHHHHHHHHHTTCCCSSCCEEGG----GCHHHHHHHHHHHHHTTCEE---EECCCHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCCCCCeeee----CCHHHHHHHHHHHHHcCCcc---cCcCCHHHHHHc
Confidence 45778889999999997654222221 24567788999999999975 455566777653
No 306
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=20.94 E-value=3.7e+02 Score=22.47 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=40.7
Q ss_pred CcceEeeC---cccHHHHHHHhhcC------C-ccEEeeccCcCCC-CccccHHHHHHHhCCcEEEcccCcccccC
Q 040616 128 KIKHIDLS---EASASTIRRAHTIH------P-ITVVRLEWSLRSR-DVEEEIVPTCRELGIGIVAYSLLGRGFLS 192 (208)
Q Consensus 128 ~ir~iGvs---~~~~~~l~~~~~~~------~-~~~~q~~~~~~~~-~~~~~~l~~~~~~gi~v~a~~pl~~G~l~ 192 (208)
.++.+-+. ..+++.++++++.. + ..+.....|+.-. .+-+++.+.|+++|+-++.=.+.++|.+.
T Consensus 218 ~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~ 293 (511)
T 3vp6_A 218 NVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLM 293 (511)
T ss_dssp GEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred cEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhh
Confidence 34444443 23677888777542 2 3344444444322 23458999999999999988888877663
No 307
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=20.74 E-value=3.3e+02 Score=21.83 Aligned_cols=112 Identities=10% Similarity=0.068 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHCC---CCeEeCCCCCCC--Cchhhhcce---EEEEeecceecCCCCccCCCChHHHHHHHHHHHHHc
Q 040616 23 ESCMIALIHHAIDSG---ITVLDTSNVYGP--HTNEILLAR---VKLTTKFGIRYEDGKYSYCGDPAYLRAACEASLKCL 94 (208)
Q Consensus 23 ~~~~~~~l~~A~~~G---i~~~DtA~~Yg~--g~~e~~~g~---~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 94 (208)
.+...++++...+.- +-.+|..+..+. ..-++.++. ++|.+|.-... .....+.+.+.++...+..
T Consensus 56 ~e~f~~~l~~i~~~~~~il~VvD~~d~~~~~~~~l~~~~~~~p~ilV~NK~DL~~------~~~~~~~~~~~l~~~~~~~ 129 (368)
T 3h2y_A 56 DDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADLIP------KSVKHDKVKHWMRYSAKQL 129 (368)
T ss_dssp CHHHHHHHHHHHHSCCEEEEEEETTSHHHHCCTTHHHHSSSSCEEEEEECGGGSC------TTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccCcEEEEEEECCCCcccHHHHHHHHhCCCcEEEEEEChhcCC------cccCHHHHHHHHHHHHHHc
Confidence 455666666665432 235787653210 012333333 88999997532 1234566777777777888
Q ss_pred CCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHH
Q 040616 95 DVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASAST 141 (208)
Q Consensus 95 ~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~ 141 (208)
|....+++.+-. -....+++.++.+.++.+...|--+|-+|.....
T Consensus 130 g~~~~~v~~iSA-~~g~gi~~L~~~l~~~~~~~~i~~vG~~nvGKSt 175 (368)
T 3h2y_A 130 GLKPEDVFLISA-AKGQGIAELADAIEYYRGGKDVYVVGCTNVGKST 175 (368)
T ss_dssp TCCCSEEEECCT-TTCTTHHHHHHHHHHHHTTSCEEEEEBTTSSHHH
T ss_pred CCCcccEEEEeC-CCCcCHHHHHhhhhhhcccceEEEecCCCCChhH
Confidence 765446665533 3345688899999888888889999999975443
No 308
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=20.72 E-value=1.8e+02 Score=18.77 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=33.6
Q ss_pred CcccEEEeecCCCCCCHHHHHHHHHHHHHc---CCcceEeeCccc-HHHHHHHhhcCCccEEeecc
Q 040616 97 DCIDLYYQHRIDTKIPIEVTIGELKRLVEE---GKIKHIDLSEAS-ASTIRRAHTIHPITVVRLEW 158 (208)
Q Consensus 97 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~~-~~~l~~~~~~~~~~~~q~~~ 158 (208)
..+|++++...-+..+- ++.+..+++. ..+.-|-+|... .+...++++.+-.+++.=++
T Consensus 47 ~~~dlvl~D~~lp~~~g---~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~ 109 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDG---YTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPF 109 (136)
T ss_dssp SCCSEEEEESCCSSSCH---HHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTC
T ss_pred CCCCEEEEeCCCCCCCH---HHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCC
Confidence 45899999765444433 4444555543 345667776643 44556666665555554433
No 309
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=20.59 E-value=1e+02 Score=18.05 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHHHHcCCcceEe
Q 040616 111 IPIEVTIGELKRLVEEGKIKHID 133 (208)
Q Consensus 111 ~~~~~~~~~l~~l~~~G~ir~iG 133 (208)
.+++..-.+|++|..+|..|.=+
T Consensus 30 w~Le~ar~aLeqLf~~G~LRKRs 52 (68)
T 3i71_A 30 WPLEKARNALEQLFSAGTLRKRS 52 (68)
T ss_dssp CCHHHHHHHHHHHHHTTSEEEEC
T ss_pred CcHHHHHHHHHHHHhcchhhhhc
Confidence 45788899999999999987644
No 310
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=20.59 E-value=85 Score=19.63 Aligned_cols=53 Identities=15% Similarity=0.009 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHcCCC--cccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcc
Q 040616 81 AYLRAACEASLKCLDVD--CIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEA 137 (208)
Q Consensus 81 ~~i~~~~~~sL~~L~~d--~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 137 (208)
+...+.+-+.|+.-|-. --|+.-. ...+-.++=++|.+|+++|+|-.=+=|-|
T Consensus 18 ~d~eekVLe~LkeaG~PlkageIae~----~GvdKKeVdKaik~LKkEgkI~SPkRCyw 72 (80)
T 2lnb_A 18 GHLEQRILQVLTEAGSPVKLAQLVKE----CQAPKRELNQVLYRMKKELKVSLTSPATW 72 (80)
T ss_dssp HHHHHHHHHHHHHHTSCEEHHHHHHH----HTSCHHHHHHHHHHHHHTTSEEEEETTEE
T ss_pred chHHHHHHHHHHHcCCCCCHHHHHHH----HCCCHHHHHHHHHHHHHcCCccCCCCcee
Confidence 34566666666666531 1111100 12456778899999999999876554444
No 311
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=20.57 E-value=1.7e+02 Score=18.44 Aligned_cols=64 Identities=22% Similarity=0.140 Sum_probs=35.6
Q ss_pred HHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHc---CCcceEeeCcc-cHHHHHHHhhcCCccEEeec
Q 040616 91 LKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEE---GKIKHIDLSEA-SASTIRRAHTIHPITVVRLE 157 (208)
Q Consensus 91 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~ 157 (208)
++.+....+|++++...-+..+ -++.+.++++. ..+.-|-+|.. +.+...++.+.+-.+++.=+
T Consensus 39 l~~l~~~~~dlvllD~~~p~~~---g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP 106 (122)
T 3gl9_A 39 LEKLSEFTPDLIVLXIMMPVMD---GFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKP 106 (122)
T ss_dssp HHHHTTBCCSEEEECSCCSSSC---HHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESS
T ss_pred HHHHHhcCCCEEEEeccCCCCc---HHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCC
Confidence 3344445689999876544433 34555566554 34666777664 34555666665544444433
No 312
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=20.48 E-value=1.7e+02 Score=23.03 Aligned_cols=83 Identities=10% Similarity=0.031 Sum_probs=0.0
Q ss_pred HHHHHHcCCcceEeeCcccHHHHHHHhhc----------------CCccEEeeccCcCCCCccccHHHHHHHhCCcEEEc
Q 040616 120 LKRLVEEGKIKHIDLSEASASTIRRAHTI----------------HPITVVRLEWSLRSRDVEEEIVPTCRELGIGIVAY 183 (208)
Q Consensus 120 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~----------------~~~~~~q~~~~~~~~~~~~~~l~~~~~~gi~v~a~ 183 (208)
+..+.+...++-++|++-+++..+++.+. ..+|++-+---+..+ .++...|-++|..|+.=
T Consensus 40 ~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H---~~~~~~al~aGkhVl~E 116 (350)
T 4had_A 40 VPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQH---IEWSIKAADAGKHVVCE 116 (350)
T ss_dssp HHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGH---HHHHHHHHHTTCEEEEC
T ss_pred HHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchh---HHHHHHHHhcCCEEEEe
Q ss_pred ccCcccccCCCCCcccchhhcCC
Q 040616 184 SLLGRGFLSSGPKLIHLSATKGC 206 (208)
Q Consensus 184 ~pl~~G~l~~~~~~~~~a~~~~~ 206 (208)
.|++. .+.+-..+.+.|++.|+
T Consensus 117 KPla~-~~~ea~~l~~~a~~~~~ 138 (350)
T 4had_A 117 KPLAL-KAGDIDAVIAARDRNKV 138 (350)
T ss_dssp SCCCS-SGGGGHHHHHHHHHHTC
T ss_pred CCccc-chhhHHHHHHHHHHcCC
No 313
>3b9o_A Alkane monoxygenase; LADA, alkane hydroxylase, monooxygenase, plasmid, oxidoreductase; HET: FMN; 1.90A {Geobacillus thermodenitrificans} PDB: 3b9n_A*
Probab=20.46 E-value=1.6e+02 Score=24.41 Aligned_cols=49 Identities=10% Similarity=0.037 Sum_probs=24.3
Q ss_pred ChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHH-HHHHHHHcCCcc
Q 040616 79 DPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIG-ELKRLVEEGKIK 130 (208)
Q Consensus 79 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~-~l~~l~~~G~ir 130 (208)
+++++.+++++..+..|+|.+ +++.+.....++...+ .+-.|++.|++|
T Consensus 355 tpe~Vad~L~~~~~~~G~d~~---~l~~~~~~~~l~~fa~~V~P~L~~rg~~~ 404 (440)
T 3b9o_A 355 TPKKVADEMQYLVEEAGIDGF---NLVQYVSPGTFVDFIELVVPELQKRGLYR 404 (440)
T ss_dssp CHHHHHHHHHHHHHHHCCCEE---EEECSSTTHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHHHHhcCCCEE---EEcCCCCHHHHHHHHHhhhHHhhhcCCcc
Confidence 566777777777676765433 3333322112222222 334555666655
No 314
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=20.44 E-value=3.6e+02 Score=22.21 Aligned_cols=156 Identities=9% Similarity=0.098 Sum_probs=90.5
Q ss_pred CHHHHHHHHHHHHHCCCCeEeCCCCCCC-------Cch-------hhhcce-------------EEEEeecceecCCCCc
Q 040616 22 PESCMIALIHHAIDSGITVLDTSNVYGP-------HTN-------EILLAR-------------VKLTTKFGIRYEDGKY 74 (208)
Q Consensus 22 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-------g~~-------e~~~g~-------------~~i~tK~~~~~~~~~~ 74 (208)
.++...++-+..+++|-+.+.|.....+ |.+ +++.-. .+|+.-+++... +
T Consensus 52 ~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~---~ 128 (406)
T 1lt8_A 52 HPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPS---Y 128 (406)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHH---H
T ss_pred CHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCccc---c
Confidence 4566788888889999999998765432 111 111111 577777776431 1
Q ss_pred cCCCChHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeC--------cccHHHHHHHh
Q 040616 75 SYCGDPAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLS--------EASASTIRRAH 146 (208)
Q Consensus 75 ~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs--------~~~~~~l~~~~ 146 (208)
....+.+.+.+.....++.|--..+|++++-.. .++.|+-.+++.+++.|+=-.+.++ .-+.+.....+
T Consensus 129 l~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi---~~~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~l 205 (406)
T 1lt8_A 129 LSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYF---EHVEEAVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRL 205 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTCSEEEECCC---SCHHHHHHHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHhhCCCCEEEEccc---CCHHHHHHHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHHh
Confidence 124566777776666666664456999999764 4567776677666666743333332 22344444444
Q ss_pred hcCCccEEeeccCcCCCCccccHHHHHHHh------CCcEEEcc
Q 040616 147 TIHPITVVRLEWSLRSRDVEEEIVPTCREL------GIGIVAYS 184 (208)
Q Consensus 147 ~~~~~~~~q~~~~~~~~~~~~~~l~~~~~~------gi~v~a~~ 184 (208)
....++.+-++++.- +..-..+++..++. ++.+++|-
T Consensus 206 ~~~~~~avGvNC~~g-P~~~~~~l~~l~~~~~~~g~~~pl~vyP 248 (406)
T 1lt8_A 206 VKAGASIIGVNCHFD-PTISLKTVKLMKEGLEAAQLKAHLMSQP 248 (406)
T ss_dssp HTTTCSEEEEESSSC-HHHHHHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred hcCCCCEEEecCCCC-HHHHHHHHHHHHHhhhhcCCCccEEEec
Confidence 445578888888521 11012445444433 67777654
No 315
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus}
Probab=20.41 E-value=4e+02 Score=22.62 Aligned_cols=60 Identities=8% Similarity=0.069 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEeecCCCCCCHHHHHHHHHHHHHcCCcceEeeCcccHHHHHHHh
Q 040616 80 PAYLRAACEASLKCLDVDCIDLYYQHRIDTKIPIEVTIGELKRLVEEGKIKHIDLSEASASTIRRAH 146 (208)
Q Consensus 80 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 146 (208)
.....+++.+.|+.||+++-.-.+... ..++...+++++|.++|+.-. |..+.+++++..
T Consensus 49 ~~~~~~~i~~dL~wLGl~wde~~~~QS----~r~~~y~~~~~~Li~~G~AY~---c~ct~~el~~~r 108 (492)
T 2cfo_A 49 RPEYTENILEGLQWLGLTWDEGPYFQS----DRLDLYRQAIQTLLDKGLAYY---CYCTPEELEALR 108 (492)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEEEEGG----GCHHHHHHHHHHHHHTTSEEE---ECCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCCCCCCCcccc----CCHHHHHHHHHHHHHCCCceE---ecCCHHHHHHHH
Confidence 456678888999999998765333332 346777889999999999763 666777776643
No 316
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=20.34 E-value=2e+02 Score=22.59 Aligned_cols=104 Identities=15% Similarity=0.206 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEeecCCCCC----CHHHHHHHHHHHHHcCC-cceEeeCcc-----c-HHHHHHHhhc
Q 040616 80 PAYLRAACEASLKCLDVDCIDLYYQHRIDTKI----PIEVTIGELKRLVEEGK-IKHIDLSEA-----S-ASTIRRAHTI 148 (208)
Q Consensus 80 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~----~~~~~~~~l~~l~~~G~-ir~iGvs~~-----~-~~~l~~~~~~ 148 (208)
++.+..+++...+. |.==.+++....... ......+.++.|+++|. |..||+-.| . .+.+...++.
T Consensus 149 ~~~i~~af~~Ar~~---dP~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~ 225 (303)
T 1ta3_B 149 EDFVRIAFETARAA---DPDAKLYINDYNLDSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSS 225 (303)
T ss_dssp THHHHHHHHHHHHH---CTTSEEEEEESCCCCTTSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHH---CCCCEEEeccccccCCchHHHHHHHHHHHHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHH
Confidence 46677777766554 221233444332211 12356777888999997 899998332 1 2344444332
Q ss_pred ---CCc-cEEeeccCcCCCCcc--ccHHHHHHHhC--CcEEEcccC
Q 040616 149 ---HPI-TVVRLEWSLRSRDVE--EEIVPTCRELG--IGIVAYSLL 186 (208)
Q Consensus 149 ---~~~-~~~q~~~~~~~~~~~--~~~l~~~~~~g--i~v~a~~pl 186 (208)
... .+.-.|+.+-....+ ..+++.|.++. ++++.|+.-
T Consensus 226 ~a~~G~~pi~iTEldi~~~qa~~y~~~~~~~~~~~~v~git~Wg~~ 271 (303)
T 1ta3_B 226 LANTGVSEVAITELDIAGAASSDYLNLLNACLNEQKCVGITVWGVS 271 (303)
T ss_dssp HHTTCCSEEEEEEEEETTCCHHHHHHHHHHHHTCTTEEEEEESCSB
T ss_pred HHHCCCCeEEEeeCCcChhHHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 222 333344444333222 26888898885 667777643
No 317
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=20.31 E-value=99 Score=23.32 Aligned_cols=42 Identities=7% Similarity=0.101 Sum_probs=25.2
Q ss_pred HHhhcCCccEEeeccCcCCC---CccccHHHHHHHhCCcEEEccc
Q 040616 144 RAHTIHPITVVRLEWSLRSR---DVEEEIVPTCRELGIGIVAYSL 185 (208)
Q Consensus 144 ~~~~~~~~~~~q~~~~~~~~---~~~~~~l~~~~~~gi~v~a~~p 185 (208)
+.++...++.+++....... .....+.+.++++|+.+.+..+
T Consensus 24 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 68 (290)
T 2qul_A 24 KRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIG 68 (290)
T ss_dssp HHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecC
Confidence 33334556777775443221 1123688888999998887653
No 318
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=20.19 E-value=1e+02 Score=18.73 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=18.8
Q ss_pred CHHHHHHHHHHHHHcCCcceEe
Q 040616 112 PIEVTIGELKRLVEEGKIKHID 133 (208)
Q Consensus 112 ~~~~~~~~l~~l~~~G~ir~iG 133 (208)
+...+-+.|..|.++|+|..+|
T Consensus 44 s~~tV~~~L~~L~~~G~I~~~g 65 (77)
T 1qgp_A 44 PKKEINRVLYSLAKKGKLQKEA 65 (77)
T ss_dssp CHHHHHHHHHHHHHHTSEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEecC
Confidence 3456788999999999999988
Done!