BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040619
(504 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH
Carboxyatractyloside
pdb|2C3E|A Chain A, The Bovine Mitochondrial Adp-Atp Carrier
Length = 297
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 134/296 (45%), Gaps = 28/296 (9%)
Query: 224 KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQAR---------LVPTIRKIWKEEXXXX 274
K F+AGG+A A S+TA AP++R+K++LQVQ A + ++ + +I KE+
Sbjct: 9 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLS 68
Query: 275 XXXXXXXXVLKVAPESAIKFHAYELLKNAIGDYIGEEKDDIGAF-GRLLAGGMAGAVAQT 333
V++ P A+ F + K + K F G L +GG AGA +
Sbjct: 69 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLC 128
Query: 334 AIYPLDLVKTRLQTHACEGG---KAPNLGTLTKDILVHEGPRAFYKGLVPSLLGIIPYAG 390
+YPLD +TRL +G + LG I +G R Y+G S+ GII Y
Sbjct: 129 FVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRA 188
Query: 391 IDLAAYETLK----DLSRTYILTDSEPGPLVQLGCGTISGALGATCVYPLQVIRTRMQAQ 446
Y+T K D +I+ V G +S YP +R RM Q
Sbjct: 189 AYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVS--------YPFDTVRRRMMMQ 240
Query: 447 RSKSAA--AYKGMSDVFWRTLQNEGYRGFYKGIFPNLLKVVPAASITYMVYETMKK 500
+ A Y G D + + ++EG + F+KG + N+L+ + A + ++Y+ +KK
Sbjct: 241 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVL-VLYDEIKK 295
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 321 LLAGGMAGAVAQTAIYPLDLVKTRLQT-HACEGGKAPNLGTLTKDILVH----EGPRAFY 375
LAGG+A A+++TA+ P++ VK LQ HA + A D +V +G +F+
Sbjct: 11 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFW 70
Query: 376 KGLVPSLLGIIPYAGIDLAAYETLKDLSRTYILTDSEPGPLV--QLGCGTISGALGATCV 433
+G + +++ P ++ A + K + + + L G +GA V
Sbjct: 71 RGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFV 130
Query: 434 YPLQVIRTRMQAQRSKSAAA--YKGMSDVFWRTLQNEGYRGFYKGIFPNLLKVVPAASIT 491
YPL RTR+ A K AA + G+ + + +++G RG Y+G ++ ++ +
Sbjct: 131 YPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAY 190
Query: 492 YMVYETMKKTL 502
+ VY+T K L
Sbjct: 191 FGVYDTAKGML 201
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2
Determined By Nmr Molecular Fragment Replacement
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 125/293 (42%), Gaps = 27/293 (9%)
Query: 226 FIAGGIAGAASRTATAPLDRLKVVLQVQ-----------TAQAR-LVPTIRKIWKEEXXX 273
F+ G A + T PLD KV LQ+Q +AQ R ++ TI + + E
Sbjct: 5 FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64
Query: 274 XXXXXXXXXVLKVAPESAIKFHAYELLKNAIGDYIGEEKDDIGAFGRLLAGGMAGAVAQT 333
+ + ++++ Y+ +K G E IG+ RLLAG GA+A
Sbjct: 65 SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTK--GSEHAGIGS--RLLAGSTTGALAVA 120
Query: 334 AIYPLDLVKTRLQTHACEGGKAPNLGTLT--KDILVHEGPRAFYKGLVPSLLGIIPYAGI 391
P D+VK R Q A GG T+ K I EG R +KG P++
Sbjct: 121 VAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA 180
Query: 392 DLAAYETLKD-LSRTYILTDSEPGPLVQ-LGCGTISGALGATCVYPLQVIRTRMQAQRSK 449
+L Y+ +KD L + ++TD P G G + + + P+ V++TR +
Sbjct: 181 ELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIAS----PVDVVKTRYM---NS 233
Query: 450 SAAAYKGMSDVFWRTLQNEGYRGFYKGIFPNLLKVVPAASITYMVYETMKKTL 502
+ Y L+ EG R FYKG P+ L++ + ++ YE +K+ L
Sbjct: 234 ALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 14/193 (7%)
Query: 320 RLLAGGMAGAVAQTAIYPLDLVKTRLQTHACEGGKAPN---------LGTLTKDILVHEG 370
+ L G A +A +PLD K RLQ G LGT+ ++ EG
Sbjct: 4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTIL-TMVRTEG 62
Query: 371 PRAFYKGLVPSLLGIIPYAGIDLAAYETLKDLSRTYILTDSEPGPLVQLGCGTISGALGA 430
PR+ Y GLV L + +A + + Y+++K Y G +L G+ +GAL
Sbjct: 63 PRSLYNGLVAGLQRQMSFASVRIGLYDSVKQF---YTKGSEHAGIGSRLLAGSTTGALAV 119
Query: 431 TCVYPLQVIRTRMQAQ-RSKSAAAYKGMSDVFWRTLQNEGYRGFYKGIFPNLLKVVPAAS 489
P V++ R QAQ R+ Y+ + + + EG RG +KG PN+ +
Sbjct: 120 AVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNC 179
Query: 490 ITYMVYETMKKTL 502
+ Y+ +K TL
Sbjct: 180 AELVTYDLIKDTL 192
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 80/198 (40%), Gaps = 27/198 (13%)
Query: 217 SKHVQRSKYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQAR---------LVPTIRKIW 267
S+H +AG GA + P D +KV Q AQAR V + I
Sbjct: 99 SEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQ---AQARAGGGRRYQSTVEAYKTIA 155
Query: 268 KEEXXXXXXXXXXXXVLKVAPESAIKFHAYELLKNAIGDYIGEEKDDI-----GAFGRLL 322
+EE V + A + + Y+L+K+ + DD+ AFG
Sbjct: 156 REEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLK-ANLMTDDLPCHFTSAFG--- 211
Query: 323 AGGMAGAVAQTAIYPLDLVKTRLQTHACEGGKAPNLGTLTKDILVHEGPRAFYKGLVPSL 382
AG P+D+VKTR A G+ + G +L EGPRAFYKG +PS
Sbjct: 212 ----AGFCTTVIASPVDVVKTRYMNSAL--GQYHSAGHCALTMLRKEGPRAFYKGFMPSF 265
Query: 383 LGIIPYAGIDLAAYETLK 400
L + + + YE LK
Sbjct: 266 LRLGSWNVVMFVTYEQLK 283
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + + F FD G + ++ + + +L + +D+ DA+ +G +++
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 109 QEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV 162
EF M K E EL + F+ D + NG I EL ++ G +++DEE+ + +
Sbjct: 66 DEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMI 125
Query: 163 EHVDKDNNGIITFEEWRDFLL 183
+ D D +G + +EE+ ++
Sbjct: 126 KEADLDGDGQVNYEEFVKMMM 146
Score = 35.8 bits (81), Expect = 0.054, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFR---RYMDIK--EMELYKIFQTIDVEHNGCILPEELWDAL 146
K+ F + D + DG + +E R +D E EL + +D + NG I +E +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 147 VKAGIEI-SDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K + ++EEL + DKD NG I+ E R ++ + T E +
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 121
Score = 33.5 bits (75), Expect = 0.32, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 32 SGPVTMDHVLLALRESKEERDIR--IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYK 89
+G + D L + + ++ D ++ F FD +GY+ +++ + L +
Sbjct: 60 NGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE 119
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYM 115
+ + K D + DG+V+Y+EF + M
Sbjct: 120 EVEQMIKEADLDGDGQVNYEEFVKMM 145
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ IR F+ FD SG +D +++ + AL + + K + D + G +D+
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 109 QEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV 162
+EF + M K E+ K F+ D + G I + L + G ++DEEL +
Sbjct: 64 EEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMI 123
Query: 163 EHVDKDNNGIITFEEW 178
+ D+D +G + EE+
Sbjct: 124 DEADRDGDGEVNEEEF 139
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 41 LLALRESKEERDIR-IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCD 99
L + ES E +I ++ FN DA SG + + ++++GL + + DL + D
Sbjct: 14 LRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAAD 73
Query: 100 ANRDGRVDYQEF---RRYMDIKEME--LYKIFQTIDVEHNGCILPEELWDALVKAGIE-I 153
+ G +DY+EF +++ E E L+ F D + +G I P+EL A + G+E +
Sbjct: 74 VDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDV 133
Query: 154 SDEELARFVEHVDKDNNGIITFEEW 178
EEL R VD+DN+G I + E+
Sbjct: 134 RIEELXR---DVDQDNDGRIDYNEF 155
Score = 36.6 bits (83), Expect = 0.037, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 VRKSGPVTMDHVLLA-LRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQ 87
V SG + + A L +K ER+ + + F +FD SGY+ +++ + +
Sbjct: 74 VDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGV--E 131
Query: 88 YKYAKDLFKVCDANRDGRVDYQEF 111
++L + D + DGR+DY EF
Sbjct: 132 DVRIEELXRDVDQDNDGRIDYNEF 155
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ DG +D
Sbjct: 298 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGDGTID 356
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 357 FPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 416
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 417 IREADIDGDGQVNYEEF 433
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D +++A + + + IR F F
Sbjct: 325 GTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVF 384
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 385 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 440
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + +G I PE L
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMM 364
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 365 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ DG +D
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGDGTID 364
Query: 108 YQEF-------RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELAR 160
+ EF +Y D +E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 365 FPEFLTMMARKMKYTDSEE-EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 161 FVEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 424 MIREADIDGDGQVNYEEF 441
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 333 GTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVF 392
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 393 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + +G I PE L
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 373 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ DG +D
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGDGTID 364
Query: 108 YQEF-------RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELAR 160
+ EF +Y D +E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 365 FPEFLTMMARKMKYTDSEE-EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 161 FVEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 424 MIREADIDGDGQVNYEEF 441
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 333 GTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVF 392
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 393 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + +G I PE L
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 373 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ DG +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGDGTID 365
Query: 108 YQEF-------RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELAR 160
+ EF +Y D +E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 366 FPEFLTMMARKMKYTDSEE-EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 161 FVEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 425 MIREADIDGDGQVNYEEF 442
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 334 GTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVF 393
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 394 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + +G I PE L
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 373
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 374 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEF----RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVE 163
+ EF R M E E+ + F+ D + NG I EL + G +++DEE+ +
Sbjct: 65 FPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 124
Query: 164 HVDKDNNGIITFEEW 178
D D +G + +EE+
Sbjct: 125 EADIDGDGQVNYEEF 139
Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL--T 70
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
++ ++ S+EE+ DKD NG I+ E R + + T E +
Sbjct: 71 MMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 119
Score = 36.6 bits (83), Expect = 0.036, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMD--HVLLALRESKEERDIRIRSLFNFFDA 64
G + +G E+ N V G T+D L + ++ + IR F FD
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDK 92
Query: 65 ANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
+G++ A++ ++ L + ++ + D + DG+V+Y+EF M K
Sbjct: 93 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 146
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ DG +D
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGDGTID 364
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 365 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 424
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 425 IREADIDGDGQVNYEEF 441
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 333 GTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 392
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 393 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + +G I PE L
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 373 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ DG +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGDGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 93 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + +G I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 109
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 56.6 bits (135), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 45 RESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRD 103
+E EE+ + F FD G + ++ + + +L Q P + + +D+ DA+ +
Sbjct: 2 QELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGN 60
Query: 104 GRVDYQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEE 157
G +D+ EF M K E EL + F+ D + NG I EL + G +++D+E
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 158 LARFVEHVDKDNNGIITFEEW 178
+ + D D +G I +EE+
Sbjct: 121 VDEMIREADIDGDGHINYEEF 141
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K + S+EEL + D+D NG+I+ E R +
Sbjct: 73 ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM 109
Score = 32.7 bits (73), Expect = 0.49, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D L+A + +++ + + F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
D +G + A++ ++ L ++ + D + DG ++Y+EF R M
Sbjct: 93 DRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 56.2 bits (134), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 56 RSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY 114
+ F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D+ EF
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLNL 72
Query: 115 MDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKD 168
M K E EL + F+ D + NG I EL + G +++DEE+ + D D
Sbjct: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
Query: 169 NNGIITFEEW 178
+G I +EE+
Sbjct: 133 GDGQINYEEF 142
Score = 38.1 bits (87), Expect = 0.010, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
E + F D + +GCI +EL + G ++ EL + VD D NG I F E+ +
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 181 FL 182
+
Sbjct: 72 LM 73
Score = 37.0 bits (84), Expect = 0.029, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EEL DKD NG I+ E R + + T E +
Sbjct: 74 ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
Score = 35.4 bits (80), Expect = 0.081, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDHV----LLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D L+A + + + ++ F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+++Y+EF + M K
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 365
Query: 108 YQEF-------RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELAR 160
+ EF +Y D +E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 366 FPEFLTMMARKMKYTDSEE-EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 161 FVEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 425 MIREADIDGDGQVNYEEF 442
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 334 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVF 393
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 394 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 374 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 56.2 bits (134), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ IR F+ FDA +G +D +++ + AL + + K + D G++++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 109 QEFRRYM-------DIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+F M D KE E+ K F+ D + G I + L + G ++DEEL
Sbjct: 62 GDFLTVMTQKMSEKDTKE-EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 162 VEHVDKDNNGIITFEEW 178
++ D+D +G ++ +E+
Sbjct: 121 IDEADRDGDGEVSEQEF 137
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
+E+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 3 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 61
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E EL + F+ D + NG I EL + G +++DEE+
Sbjct: 62 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 121
Query: 162 VEHVDKDNNGIITFEEWRDFLL 183
+ D D +G + +EE+ ++
Sbjct: 122 IREADVDGDGQVNYEEFVQVMM 143
Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 69
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EEL DKD NG I+ E R + + T E +
Sbjct: 70 ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 118
Score = 35.0 bits (79), Expect = 0.095, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDHV----LLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D L+A + + + ++ F F
Sbjct: 30 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 89
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 90 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 145
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 366
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 367 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 426
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 427 IREADIDGDGQVNYEEF 443
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 335 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 394
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 395 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 450
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 374
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 375 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+ +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 38.5 bits (88), Expect = 0.009, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + + + D + DG+V+Y+EF + M K
Sbjct: 94 DKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMMTAK 149
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 31 KSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKY 90
+SGP+ + L E K+E I F+ FD N G+LDY +++ + AL +
Sbjct: 9 QSGPLNSE----LLEEQKQE----IYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60
Query: 91 AKDLFKVCDANRDGRVDYQEFRRYMDIKEM------ELYKIFQTIDVEHNGCILPEELWD 144
DL D+ + Y +F M K + E+ + FQ D +H G I + L
Sbjct: 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR 120
Query: 145 ALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+ G ++DEEL +E D D +G I E+
Sbjct: 121 VAKELGETLTDEELRAMIEEFDLDGDGEINENEF 154
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 365
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 366 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 426 IREADIDGDGQVNYEEF 442
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 334 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 393
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 394 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 374 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
+E+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E EL + F+ D + NG I EL + G +++DEE+
Sbjct: 65 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEWRDFLL 183
+ D D +G + +EE+ ++
Sbjct: 125 IREADVDGDGQVNYEEFVQVMM 146
Score = 35.0 bits (79), Expect = 0.10, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDHV----LLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D L+A + + + ++ F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 93 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 365
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 366 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 426 IREADIDGDGQVNYEEF 442
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 334 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 393
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 394 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 374 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 60
Query: 108 YQEF-----RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV 162
+ EF R+ D E+ + F+ D + NG I EL + G +++DEE+ +
Sbjct: 61 FPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
Query: 163 EHVDKDNNGIITFEEW 178
+ D +G + +EE+
Sbjct: 121 REANIDGDGQVNYEEF 136
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH---VLLALRESKEERDIRIRSLFNFFD 63
G + +G E+ N V G T+D + + R+ K+ IR F FD
Sbjct: 29 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFD 88
Query: 64 AANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
+GY+ A++ ++ L + ++ + + + DG+V+Y+EF + M
Sbjct: 89 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMM 140
Score = 36.2 bits (82), Expect = 0.048, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCILPEELWDAL 146
K+ F + D + DG + +E M + E EL + +D + NG I E +
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 147 VKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
+ + EE+ DKD NG I+ E R + + T E +
Sbjct: 69 ARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 116
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 36.6 bits (83), Expect = 0.030, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 110
Score = 36.6 bits (83), Expect = 0.031, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+V+Y+EF M K
Sbjct: 94 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 37.0 bits (84), Expect = 0.029, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Score = 36.6 bits (83), Expect = 0.031, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+V+Y+EF M K
Sbjct: 93 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 148
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+V+Y+EF M K
Sbjct: 94 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
Score = 36.6 bits (83), Expect = 0.030, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 110
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 37.0 bits (84), Expect = 0.024, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+V+Y+EF M K
Sbjct: 93 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTAK 148
Score = 36.6 bits (83), Expect = 0.031, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 10 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 68
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 128
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 129 IREADIDGDGQVNYEEF 145
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 37 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 96
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 97 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 152
Score = 36.2 bits (82), Expect = 0.044, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 76
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 77 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 125
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 62
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 123 IREADIDGDGQVNYEEF 139
Score = 38.5 bits (88), Expect = 0.009, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 31 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 90
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M
Sbjct: 91 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 36.2 bits (82), Expect = 0.044, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 63
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 64 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 123
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 124 IREADIDGDGQVNYEEF 140
Score = 38.5 bits (88), Expect = 0.009, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 32 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 91
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M
Sbjct: 92 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 36.2 bits (82), Expect = 0.044, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 12 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 71
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 72 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 47 SKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGR 105
+ EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G
Sbjct: 2 ATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGT 60
Query: 106 VDYQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELA 159
+D+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 160 RFVEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 121 EMIREADIDGDGQVNYEEF 139
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 31 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 90
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 91 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 146
Score = 36.2 bits (82), Expect = 0.049, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 107
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
E++ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E EL + F+ D + NG I EL + G +++DEE+
Sbjct: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G I ++E+
Sbjct: 126 IREADVDGDGQINYDEF 142
Score = 38.1 bits (87), Expect = 0.010, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
E + F D + +GCI +EL + G ++ EL + VD D NG I F E+ +
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 181 FL 182
+
Sbjct: 72 LM 73
Score = 37.0 bits (84), Expect = 0.029, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EEL DKD NG I+ E R + + T E +
Sbjct: 74 ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDHV----LLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D L+A + + + ++ F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+++Y EF + M K
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 94 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 61
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 62 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 121
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 122 IREADIDGDGQVNYEEF 138
Score = 38.5 bits (88), Expect = 0.009, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 30 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 89
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M
Sbjct: 90 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 142
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 69
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 70 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 118
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 8 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 66
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 67 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 126
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 127 IREADIDGDGQVNYEEF 143
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 35 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 94
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 95 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 150
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 15 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 74
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 75 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 123
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 62
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 123 IREADIDGDGQVNYEEF 139
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 31 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 90
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 91 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 146
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 94 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 60
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 121 IREADIDGDGQVNYEEF 137
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 29 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 88
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 89 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 144
Score = 36.2 bits (82), Expect = 0.047, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 69 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 105
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 38.5 bits (88), Expect = 0.010, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M
Sbjct: 93 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 55.5 bits (132), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E EL + F+ D + NG I EL + G +++D+E+
Sbjct: 65 FPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G I +EE+
Sbjct: 125 IREADIDGDGHINYEEF 141
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K + S+EEL + D+D NG+I+ E R +
Sbjct: 73 ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM 109
Score = 32.7 bits (73), Expect = 0.49, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D L+A + +++ + + F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
D +G + A++ ++ L ++ + D + DG ++Y+EF R M
Sbjct: 93 DRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 55.5 bits (132), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 94 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
Score = 36.2 bits (82), Expect = 0.050, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 110
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 55.5 bits (132), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 70
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 71 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 130
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 131 IREADIDGDGQVNYEEF 147
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 39 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 98
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 99 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 154
Score = 36.2 bits (82), Expect = 0.050, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 19 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 78
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 79 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 115
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 55.5 bits (132), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 93 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
Score = 36.2 bits (82), Expect = 0.050, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 109
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 55.1 bits (131), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IRESDIDGDGQVNYEEF 142
Score = 37.0 bits (84), Expect = 0.029, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Score = 36.6 bits (83), Expect = 0.035, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+V+Y+EF M K
Sbjct: 94 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTSK 149
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 55.1 bits (131), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G ++DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 94 DKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 110
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 55.1 bits (131), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G ++DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 93 DKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K S+EE+ DKD NG I+ E R +
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 109
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 55.1 bits (131), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ D + +G VD
Sbjct: 6 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAEL-RDMMSEIDRDGNGTVD 64
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG + EL + + G ++SDEE+
Sbjct: 65 FPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 125 IRAADTDGDGQVNYEEF 141
Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 41 LLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDA 100
++A + + + IR F FD +G++ A++ ++ L + ++ + D
Sbjct: 71 MMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADT 130
Query: 101 NRDGRVDYQEFRRYM 115
+ DG+V+Y+EF R +
Sbjct: 131 DGDGQVNYEEFVRVL 145
Score = 32.7 bits (73), Expect = 0.49, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + ID + NG + PE L
Sbjct: 13 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
K ++EE+ DKD NG ++ E R +
Sbjct: 73 ARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVM 109
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 331
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 332 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 391
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 392 IREADIDGDGQVNYEEF 408
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 300 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 359
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 360 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 415
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 340 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 328
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 329 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 388
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 389 IREADIDGDGQVNYEEF 405
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 297 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 356
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M
Sbjct: 357 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 409
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 336
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 337 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 331
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 332 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 391
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 392 IREADIDGDGQVNYEEF 408
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 300 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 359
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 360 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 415
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 340 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 44 LRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANR 102
+ E EE+ + F FD +G + ++ + + L Q P + + +DL + N
Sbjct: 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAEL-QDLIAEAENNN 59
Query: 103 DGRVDYQEF-------RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISD 155
+G++++ EF R D +E E+ + F+ D + +G I P EL ++ G +++D
Sbjct: 60 NGQLNFTEFCGIMAKQMRETDTEE-EMREAFKIFDRDGDGFISPAELRFVMINLGEKVTD 118
Query: 156 EELARFVEHVDKDNNGIITFEEW 178
EE+ + D D +G+I +EE+
Sbjct: 119 EEIDEMIREADFDGDGMINYEEF 141
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 365
Query: 108 YQEF----RRYMDI--KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+M E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 366 FPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 426 IREADIDGDGQVNYEEF 442
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + IR F F
Sbjct: 334 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVF 393
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 394 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
S+EE+ DKD NG I+ E R + + T E +
Sbjct: 374 ARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
+E+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E +L + F+ D + NG I EL + G +++DEE+
Sbjct: 65 FPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEWRDFLL 183
+ D D +G + +EE+ ++
Sbjct: 125 IREADVDGDGQVNYEEFVQVMM 146
Score = 35.8 bits (81), Expect = 0.053, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDHV----LLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D L+A + + + +++ F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +G++ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 93 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 148
Score = 35.4 bits (80), Expect = 0.065, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+E+L DKD NG I+ E R + + T E +
Sbjct: 73 ARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 53.5 bits (127), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 108 YQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF M K E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ + D +G + +EE+
Sbjct: 125 IREANIDGDGQVNYEEF 141
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + + + DG+V+Y+EF + M K
Sbjct: 93 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTAK 148
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E M + E EL + +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
K S+EE+ DKD NG I+ E R + + T E +
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ IR F+ FD SG +D +++ + AL + + K + D + G +D+
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 109 QEFRRYM-------DIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+EF M D +E E+ K F+ D +++G I ++L + G +++EEL
Sbjct: 84 EEFLTMMTAKMGERDSRE-EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEM 142
Query: 162 VEHVDKDNNGIITFEEW 178
+ D++++ I +E+
Sbjct: 143 IAEADRNDDNEIDEDEF 159
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 97 VCDANRD---GRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEI 153
V A RD GRV E ++ E+ + F D + +G I +EL A+ G E
Sbjct: 8 VVSARRDQKKGRVGLTEEQKQ------EIREAFDLFDTDGSGTIDAKELKVAMRALGFEP 61
Query: 154 SDEELARFVEHVDKDNNGIITFEEW 178
EE+ + + +DKD +G I FEE+
Sbjct: 62 KKEEIKKMISEIDKDGSGTIDFEEF 86
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 32 SGPVTMDHVLLALRESKEERDIR--IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYK 89
SG + + L + ERD R I F FD NSG + + L +
Sbjct: 78 SGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEE 137
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYM 115
+++ D N D +D EF R M
Sbjct: 138 ELQEMIAEADRNDDNEIDEDEFIRIM 163
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL + G +++DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
D +GY+ A++ ++ L + ++ + D + DG+V+Y+EF + M K
Sbjct: 94 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 79 LSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEH 133
L+ QI A++K A F + D + DG + +E M + E EL + +D +
Sbjct: 5 LTEEQI-AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 134 NGCI-LPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIE 192
NG I PE L K S+EE+ DKD NG I+ E R + + T E
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 193 NI 194
+
Sbjct: 121 EV 122
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE ++ F+ FDA G + ++ + + L Q P + + + +V D + G +D
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV-DEDGSGTID 71
Query: 108 YQEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEEL 158
++EF M D K E EL + F+ D +G I EEL + +G ++DEE+
Sbjct: 72 FEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEI 131
Query: 159 ARFVEHVDKDNNGIITFEEW 178
++ DK+N+G I F+E+
Sbjct: 132 ESLMKDGDKNNDGRIDFDEF 151
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH---VLLALRESKEE----RDIRIRSLF 59
G + +G + A V + G T+D +++ +R+ KE+ + + F
Sbjct: 40 GTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECF 99
Query: 60 NFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMD 116
FD GY+D ++ A + + L K D N DGR+D+ EF + M+
Sbjct: 100 RIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 32.3 bits (72), Expect = 0.69, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 73 AQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQ 127
A+ S LS I A++K A D+F DA+ G + +E M + + EL I +
Sbjct: 5 AEARSYLSEEMI-AEFKAAFDMF---DADGGGDISVKELGTVMRMLGQTPTKEELDAIIE 60
Query: 128 TIDVEHNGCILPEELWDALVKAGIE----ISDEELARFVEHVDKDNNGIITFEEWRDFLL 183
+D + +G I EE +V+ E S+EELA D++ +G I EE +
Sbjct: 61 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFR 120
Query: 184 LYPHEATIENI 194
T E I
Sbjct: 121 ASGEHVTDEEI 131
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGL--SALQIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
+++S F D GY+ Q++ GL L++P + L D++ G++DY EF
Sbjct: 53 KLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL---LLDQIDSDGSGKIDYTEF 109
Query: 112 -RRYMDIKEME---LYKIFQTIDVEHNGCILPEEL----WDALVKAGIEISD-EELARFV 162
+D K++ +Y F+ DV+++G I EL ++ K I D + R +
Sbjct: 110 IAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMI 169
Query: 163 EHVDKDNNGIITFEEWRDFLLL 184
VDK+N+G I F E+ + + L
Sbjct: 170 RDVDKNNDGKIDFHEFSEMMKL 191
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 31 KSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKY 90
+SGP+ + L E K+E I F+ FD N G+LDY +++ AL +
Sbjct: 9 QSGPLNSE----LLEEQKQE----IYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKRE 60
Query: 91 AKDLFKVCDANRDGRVDYQEFRRYMDIKEM------ELYKIFQTIDVEHNGCILPEELWD 144
DL D+ Y +F K + E+ + FQ D +H G I + L
Sbjct: 61 ILDLIDEYDSEGRHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR 120
Query: 145 ALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+ G ++DEEL +E D D +G I E+
Sbjct: 121 VAKELGETLTDEELRAXIEEFDLDGDGEINENEF 154
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVDYQEFR 112
++ F+ FDA G + ++ + + L Q P + + + + D + G +D++EF
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDA-IIEEVDEDGSGTIDFEEFL 76
Query: 113 RYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVE 163
M D K E EL ++F+ D +G I EEL + +G ++DEE+ ++
Sbjct: 77 VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMK 136
Query: 164 HVDKDNNGIITFEEW 178
DK+N+G I F+E+
Sbjct: 137 DGDKNNDGRIDFDEF 151
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 23 SASCNPVRKSGPVTMDH---VLLALRESKEE----RDIRIRSLFNFFDAANSGYLDYAQI 75
A V + G T+D +++ +R+ KE+ + + LF FD GY+D ++
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEEL 115
Query: 76 ESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMD 116
A + + L K D N DGR+D+ EF + M+
Sbjct: 116 AEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 83 QIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI------KEMELYKIFQTIDVEHNGC 136
++ A++K A D+F DA+ G + +E M + KE EL I + +D + +G
Sbjct: 14 EMIAEFKAAFDMF---DADGGGDISVKELGTVMRMLGQTPTKE-ELDAIIEEVDEDGSGT 69
Query: 137 ILPEELWDALVKAGIEI----SDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIE 192
I EE +V+ E S+EELA D++ +G I EE + T E
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDE 129
Query: 193 NI 194
I
Sbjct: 130 EI 131
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 48.9 bits (115), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 57 SLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY-- 114
+LF D G + Y ++++ +S + + + +FK DA+ +G +D EF ++
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 115 ------MDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKD 168
+ ++ L +++ +DV+ +G + EE+ K GI E++A V D +
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADAN 119
Query: 169 NNGIITFEEWRDFLL 183
+G IT EE+ +F L
Sbjct: 120 GDGYITLEEFLEFSL 134
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 91 AKDLFKVCDANRDGRVDYQEFRRYMDIK-----EMELYKIFQTIDVEHNGCILPEELWDA 145
A+ LFK D N DG V Y+E + ++ K E L IF++ID + NG I E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 146 LVK-AGIEISDEELARFVEH--VDKDNNGIITFEEWRDFLLLYPHEATIENI 194
G ++SD+++ V + +D D +G +T EE F + E E +
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQV 113
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 48.9 bits (115), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 57 SLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY-- 114
+LF D G + Y ++++ +S + + + +FK DA+ +G +D EF ++
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 115 ------MDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKD 168
+ ++ L +++ +DV+ +G + EE+ K GI E++A V D +
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADAN 119
Query: 169 NNGIITFEEWRDFLL 183
+G IT EE+ +F L
Sbjct: 120 GDGYITLEEFLEFSL 134
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 91 AKDLFKVCDANRDGRVDYQEFRRYMDIK-----EMELYKIFQTIDVEHNGCILPEELWDA 145
A+ LFK D N DG V Y+E + ++ K E L IF++ID + NG I E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 146 LVK-AGIEISDEELARFVEH--VDKDNNGIITFEEWRDFLLLYPHEATIENI 194
G ++SD+++ V + +D D +G +T EE F + E E +
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQV 113
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF--- 111
++ LF D NSG + + +++ GL + KDL D ++ G +DY EF
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 112 RRYMDIKEME--LYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDN 169
+++ E E L F D + +G I +E+ A G++ D + ++ +D+DN
Sbjct: 72 TVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLD--DIHIDDMIKEIDQDN 129
Query: 170 NGIITFEEW 178
+G I + E+
Sbjct: 130 DGQIDYGEF 138
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 9 AVERVGLPKMESTRS--ASCNPVRKSGPVTMDHVLLA-LRESKEERDIRIRSLFNFFDAA 65
++RVG MES + KSG + + A + +K ER+ + S F++FD
Sbjct: 35 GLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKD 94
Query: 66 NSGYLDYAQIES-----GLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
SGY+ +I+ GL + I D+ K D + DG++DY EF M
Sbjct: 95 GSGYITLDEIQQACKDFGLDDIHID-------DMIKEIDQDNDGQIDYGEFAAMM 142
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE ++ F+ FDA G + ++ + + L + + + D + G +D+
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 72
Query: 109 QEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELA 159
+EF M D K E EL F+ D +G I EEL + L G +++E++
Sbjct: 73 EEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIE 132
Query: 160 RFVEHVDKDNNGIITFEEW 178
++ DK+N+G I F+E+
Sbjct: 133 DLMKDSDKNNDGRIDFDEF 151
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 32 SGPVTMDHVLLAL-RESKEE----RDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPA 86
SG + + L+ + R+ KE+ + + + F FD G++D ++ L A
Sbjct: 67 SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 126
Query: 87 QYKYAKDLFKVCDANRDGRVDYQEFRRYMD 116
+ +DL K D N DGR+D+ EF + M+
Sbjct: 127 TEEDIEDLMKDSDKNNDGRIDFDEFLKMME 156
Score = 35.8 bits (81), Expect = 0.058, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 83 QIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCI 137
++ A++K A D+F DA+ G + +E M + + EL I + +D + +G I
Sbjct: 14 EMIAEFKAAFDMF---DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 138 LPEELWDALVKAGIE----ISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIEN 193
EE +V+ E S+EELA DK+ +G I EE + L T E+
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 194 I 194
I
Sbjct: 131 I 131
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE ++ F+ FDA G + ++ + + L + + + D + G +D+
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 109 QEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELA 159
+EF M D K E EL F+ D +G I EEL + L G +++E++
Sbjct: 76 EEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIE 135
Query: 160 RFVEHVDKDNNGIITFEEW 178
++ DK+N+G I F+E+
Sbjct: 136 DLMKDSDKNNDGRIDFDEF 154
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 32 SGPVTMDHVLLAL-RESKEE----RDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPA 86
SG + + L+ + R+ KE+ + + + F FD G++D ++ L A
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 129
Query: 87 QYKYAKDLFKVCDANRDGRVDYQEFRRYMD 116
+ +DL K D N DGR+D+ EF + M+
Sbjct: 130 TEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.8 bits (81), Expect = 0.058, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 83 QIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCI 137
++ A++K A D+F DA+ G + +E M + + EL I + +D + +G I
Sbjct: 17 EMIAEFKAAFDMF---DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 LPEELWDALVKAGIE----ISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIEN 193
EE +V+ E S+EELA DK+ +G I EE + L T E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 194 I 194
I
Sbjct: 134 I 134
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE ++ F+ FDA G + ++ + + L + + + D + G +D+
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 109 QEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELA 159
+EF M D K E EL F+ D +G I EEL + L G +++E++
Sbjct: 76 EEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIE 135
Query: 160 RFVEHVDKDNNGIITFEEW 178
++ DK+N+G I F+E+
Sbjct: 136 DLMKDSDKNNDGRIDFDEF 154
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 32 SGPVTMDHVLLAL-RESKEE----RDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPA 86
SG + + L+ + R+ KE+ + + F FD G++D ++ L A
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHV 129
Query: 87 QYKYAKDLFKVCDANRDGRVDYQEFRRYMD 116
+ +DL K D N DGR+D+ EF + M+
Sbjct: 130 TEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.4 bits (80), Expect = 0.083, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 83 QIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCI 137
++ A++K A D+F DA+ G + +E M + + EL I + +D + +G I
Sbjct: 17 EMIAEFKAAFDMF---DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 LPEELWDALVKAGIE----ISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIEN 193
EE +V+ E S+EELA DK+ +G I EE + L T E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 194 I 194
I
Sbjct: 134 I 134
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE ++ F+ FDA G + ++ + + L + + + D + G +D+
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 109 QEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELA 159
+EF M D K E EL F+ D +G I EEL + L G +++E++
Sbjct: 76 EEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIE 135
Query: 160 RFVEHVDKDNNGIITFEEW 178
++ DK+N+G I F+E+
Sbjct: 136 DLMKDSDKNNDGRIDFDEF 154
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 32 SGPVTMDHVLLAL-RESKEE----RDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPA 86
SG + + L+ + R+ KE+ + + F FD G++D ++ L A
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHV 129
Query: 87 QYKYAKDLFKVCDANRDGRVDYQEFRRYMD 116
+ +DL K D N DGR+D+ EF + M+
Sbjct: 130 TEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 33.1 bits (74), Expect = 0.32, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 83 QIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCI 137
++ A++K A D+F DA+ G + +E M + + EL I + +D + +G I
Sbjct: 17 EMIAEFKAAFDMF---DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 LPEELWDALVKAGIE----ISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIEN 193
EE +V+ E S+EEL DK+ +G I EE + L T E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 194 I 194
I
Sbjct: 134 I 134
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 91 AKDLFKVCDANRDGRVDYQEFRRYMDIK-----EMELYKIFQTIDVEHNGCILPEEL--W 143
A+ LFK DAN DG V Y+E + ++ K E L IF+ ID++ NG I E +
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 144 DALVKAGIEISDEE--LARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
A VK ++SDE+ L + +D D +G +T EE F + +E ++ I
Sbjct: 62 AAAVKEQ-DLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQI 113
Score = 42.7 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 57 SLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY-M 115
+LF DA G + Y ++++ +S+ + + + +FK D + +G +D EF ++
Sbjct: 4 ALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAA 63
Query: 116 DIKEMELYK-------IFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKD 168
+KE +L +++ +D + +G + EE+ K G E +++ + D +
Sbjct: 64 AVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMK----ADAN 119
Query: 169 NNGIITFEEWRDFLL 183
+G IT EE+ F L
Sbjct: 120 GDGYITLEEFLAFNL 134
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + +L Q P + + +D DA+ +G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAEL-QDXINEVDADGNGTID 65
Query: 108 YQEF-----RRYMDIK-EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL G +++DEE+ +
Sbjct: 66 FPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQX 125
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDHVLLALRESKEERDI----RIRSLFNFF 62
G +G E+ N V G T+D +++ +D IR F F
Sbjct: 34 GTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVF 93
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
D +GY+ A++ + L + + D + DG+V+Y+EF
Sbjct: 94 DKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 79 LSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF---RRYM--DIKEMELYKIFQTIDVEH 133
L+ QI A++K A F + D + DG + +E R + + E EL +D +
Sbjct: 5 LTEEQI-AEFKEA---FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADG 60
Query: 134 NGCI-LPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWR 179
NG I PE L K S+EE+ DKD NG I+ E R
Sbjct: 61 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + +L Q P + + +D DA+ +G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAEL-QDXINEVDADGNGTID 64
Query: 108 YQEF-----RRYMDIK-EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ EF R+ D E E+ + F+ D + NG I EL G +++DEE+
Sbjct: 65 FPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEX 124
Query: 162 VEHVDKDNNGIITFEEW 178
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDHVLLALRESKEERDI----RIRSLFNFF 62
G +G E+ N V G T+D +++ +D IR F F
Sbjct: 33 GTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVF 92
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
D +GY+ A++ + L + + + D + DG+V+Y+EF
Sbjct: 93 DKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 79 LSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF---RRYM--DIKEMELYKIFQTIDVEH 133
L+ QI A++K A F + D + DG + +E R + + E EL +D +
Sbjct: 4 LTEEQI-AEFKEA---FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADG 59
Query: 134 NGCI-LPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWR 179
NG I PE L K S+EE+ DKD NG I+ E R
Sbjct: 60 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE ++ F+ FDA G + ++ + + L + + + D + G +D+
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 109 QEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELA 159
+EF M D K E EL F+ D +G I EEL + L G + +E++
Sbjct: 76 EEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIE 135
Query: 160 RFVEHVDKDNNGIITFEEW 178
++ DK+N+G I F+E+
Sbjct: 136 DLMKDSDKNNDGRIDFDEF 154
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 32 SGPVTMDHVLLAL-RESKEE----RDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPA 86
SG + + L+ + R+ KE+ + + + F FD G++D ++ L A
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 129
Query: 87 QYKYAKDLFKVCDANRDGRVDYQEFRRYMD 116
+ +DL K D N DGR+D+ EF + M+
Sbjct: 130 IEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 83 QIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCI 137
++ A++K A D+F DA+ G + +E M + + EL I + +D + +G I
Sbjct: 17 EMIAEFKAAFDMF---DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 LPEELWDALVKAGIE----ISDEELARFVEHVDKDNNGIITFEEWRDFL 182
EE +V+ E S+EELA DK+ +G I EE + L
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEIL 122
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 43 ALRESKEERDIRIRSLFNFFD-AANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDAN 101
A+ + EE+ ++ F+ F A G + ++ + L + +++ D +
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 102 RDGRVDYQEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIE 152
G VD+ EF M D K E EL +F+ D +G I +EL L G
Sbjct: 68 GSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGET 127
Query: 153 ISDEELARFVEHVDKDNNGIITFEEWRDFL 182
I+++++ ++ DK+N+G I ++EW +F+
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEWLEFM 157
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F+ FD G + ++ + +L +D DA+ +G +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
Query: 109 QEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV 162
EF R D E E+ + F+ D + NG I EL G +++DEE+ +
Sbjct: 66 PEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXI 125
Query: 163 EHVDKDNNGIITFEEW 178
D D +G + +EE+
Sbjct: 126 READIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 92 KDLFKVCDANRDGRVDYQEF---RRYM--DIKEMELYKIFQTIDVEHNGCI-LPEELWDA 145
K+ F + D + DG + +E R + + E EL +D + NG I PE L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXX 72
Query: 146 LVKAGIEISDEELARFVEHVDKDNNGIITFEEWR 179
S+EE+ DKD NG I+ E R
Sbjct: 73 ARCXKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F FD NSG + +++ + + +L + DL D + + +++
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEF 66
Query: 109 QEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV 162
EF M + E EL + F+ D +G I EL L G +++D E+ +
Sbjct: 67 SEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEML 126
Query: 163 EHVDKDNNGIITFEEWRDFL 182
V D +G I +++ L
Sbjct: 127 REV-SDGSGEINIKQFAALL 145
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F FD N+G + +++ + + +L + DL D + + ++++
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 109 QEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV 162
EF M + E EL + F+ D +G I EL L G +++D E+ +
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDML 125
Query: 163 EHVDKDNNGIITFEEWRDFL 182
V D +G I +++ L
Sbjct: 126 REV-SDGSGEINIQQFAALL 144
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRR 113
R+ F D NSG L + S L LQ + D+F D + +G VD++EF
Sbjct: 7 RLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVIDIF---DTDGNGEVDFKEFIE 62
Query: 114 YMDI------KEMELYKIFQTIDVEHNGCILPEELWDAL-VKAGIEISDEELARFVE--- 163
+ KE +L F+ D++ +G I EL+ L + G + D +L + V+
Sbjct: 63 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 122
Query: 164 -HVDKDNNGIITFEEW 178
+ DKD +G I+FEE+
Sbjct: 123 INADKDGDGRISFEEF 138
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 25 SCNPVRKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESG------ 78
S + ++ + M L L E+KE + +F D G LD ++ G
Sbjct: 291 SSQKLAQAAMLFMGSKLTTLEETKE-----LTQIFRQLDNNGDGQLDRKELIEGYRKLMQ 345
Query: 79 --------LSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF-----RRYMDIKEMELYKI 125
L + QI A+ + + + D +R+G ++Y EF + + + L
Sbjct: 346 WKGDTVSDLDSSQIEAEVDH---ILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAA 402
Query: 126 FQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
FQ D + +G I EEL + E+ DE + ++ DK+N+G + FEE+ + +
Sbjct: 403 FQQFDSDGSGKITNEEL--GRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRR 113
R+ F D NSG L + S L LQ + D+F D + +G VD++EF
Sbjct: 8 RLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVIDIF---DTDGNGEVDFKEFIE 63
Query: 114 YMDI------KEMELYKIFQTIDVEHNGCILPEELWDAL-VKAGIEISDEELARFVE--- 163
+ KE +L F+ D++ +G I EL+ L + G + D +L + V+
Sbjct: 64 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 123
Query: 164 -HVDKDNNGIITFEEW 178
+ DKD +G I+FEE+
Sbjct: 124 INADKDGDGRISFEEF 139
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ IR F+ FDA +G +D +++ AL + + K D G+ ++
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNF 86
Query: 109 QEF-------RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+F D KE E+ K F+ D + G I + L + G ++DEEL
Sbjct: 87 GDFLTVXTQKXSEKDTKE-EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEX 145
Query: 162 VEHVDKDNNGIITFEEW 178
++ D+D +G ++ +E+
Sbjct: 146 IDEADRDGDGEVSEQEF 162
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + Q+ + + +L Q P + + +D+ A+ +G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAEL-QDMINEVGADGNGTID 365
Query: 108 YQEF-----RRYMDI-KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
+ +F R+ D E E+ + F+ + NG I +L + G +++DEE+
Sbjct: 366 FPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEM 425
Query: 162 VEHVDKDNNGIITFEEW 178
+ D +G + +E++
Sbjct: 426 IREAGIDGDGQVNYEQF 442
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Query: 7 GHAVERVGLPKMESTRSASCNPVRKSGPVTMDH----VLLALRESKEERDIRIRSLFNFF 62
G + +G E+ N V G T+D ++A + + + IR F F
Sbjct: 334 GTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVF 393
Query: 63 DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
+GY+ AQ+ ++ L + ++ + + DG+V+Y++F + M K
Sbjct: 394 GKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMMTAK 449
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 29/173 (16%)
Query: 25 SCNPVRKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESG------ 78
S + ++ + M L L E+KE + +F D G LD ++ G
Sbjct: 17 SSQKLAQAAMLFMGSKLTTLEETKE-----LTQIFRQLDNNGDGQLDRKELIEGYRKLMQ 71
Query: 79 --------LSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF-----RRYMDIKEMELYKI 125
L + QI A+ + + + D +R+G ++Y EF + + + L
Sbjct: 72 WKGDTVSDLDSSQIEAEVDH---ILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAA 128
Query: 126 FQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
FQ D + +G I EEL + E+ DE + ++ DK+N+G + FEE+
Sbjct: 129 FQQFDSDGSGKITNEEL--GRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEF 179
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 34 PVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKD 93
V MD LL RE R+ + F FD+ SG + ++ ++ + +
Sbjct: 111 TVCMDKQLLLSRE-------RLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQ-- 161
Query: 94 LFKVCDANRDGRVDYQEFRRYM 115
+ + CD N DG VD++EF M
Sbjct: 162 VLQECDKNNDGEVDFEEFVEMM 183
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 56 RSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF---- 111
+ F FD+ +G++ +++ L + + ++F DA +G++ + EF
Sbjct: 9 KEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMM 68
Query: 112 --RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV 162
R E L + F+T D E G I L DAL+ G + E A F+
Sbjct: 69 GRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F FD N+G + +++ + + +L + DL D + + ++++
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 109 QEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEEL 158
EF M + E EL + F+ D +G I EL L G +++D EL
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
Score = 32.0 bits (71), Expect = 0.91, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D ++NG I EL + G+ S+ E+ + +D D N I F E+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 59 FNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIK 118
F D SG + ++ + LS+ +P + L + D N G + + EF+ D+
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK---DLH 89
Query: 119 E--MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFE 176
+ + + F+ D +G + E+ AL+ +G ++S++ + D+ G + F+
Sbjct: 90 HFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFD 149
Query: 177 EWRDFLLLYPHEATIENIYHHWER 200
D++ L + N++ ++R
Sbjct: 150 ---DYVELSIFVCRVRNVFAFYDR 170
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 113 RYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGI 172
R+M+ + EL + F+ +D + +G I EL AL AG+ S + + DK+++G
Sbjct: 21 RHMNDNQ-ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 173 ITFEEWRD 180
ITF+E++D
Sbjct: 80 ITFDEFKD 87
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 97 VCDANRD---GRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEI 153
V A RD GRV E ++ E+ + F D + +G I +EL A+ G E
Sbjct: 10 VVSARRDQKKGRVGLTEEQKQ------EIREAFDLFDTDGSGTIDAKELKVAMRALGFEP 63
Query: 154 SDEELARFVEHVDKDNNGIITFEEW 178
EE+ + + +DKD +G I FEE+
Sbjct: 64 KKEEIKKMISEIDKDGSGTIDFEEF 88
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ IR F+ FD SG +D +++ + AL + + K + D + G +D+
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 85
Query: 109 QEFRRYMDIK 118
+EF M K
Sbjct: 86 EEFLTMMTAK 95
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+SK + + + LF FD GY+D +++ L A ++L K D N DGR
Sbjct: 8 DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 67
Query: 106 VDYQEFRRYM 115
+DY EF +M
Sbjct: 68 IDYDEFLEFM 77
Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E EL +F+ D +G I EEL L G I+++++ ++ DK+N+G I ++E+
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 179 RDFL 182
+F+
Sbjct: 74 LEFM 77
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F FD N+G + +++ + + +L + DL D + + ++++
Sbjct: 7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 66
Query: 109 QEFRRYM------DIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV 162
EF M + E EL + F+ D +G I EL L G +++D E+ +
Sbjct: 67 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDML 126
Query: 163 EHVDKDNNGIITFEEW 178
V D +G I +++
Sbjct: 127 REV-SDGSGEINIQQF 141
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 116 DIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITF 175
DI + E +IF+ D +G I EL DAL G ++ +E+ R + +D D +G I+F
Sbjct: 9 DIADRE--RIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISF 65
Query: 176 EEWRDF 181
+E+ DF
Sbjct: 66 DEFTDF 71
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 43 ALRESKEERDIRIRSLFNFFD-AANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDAN 101
A+ + EE+ ++ F+ F A G + ++ + L + +++ D +
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 102 RDGRVDYQEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIE 152
G VD+ EF M D K E EL +F+ D +G I EEL L G
Sbjct: 68 GSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGET 127
Query: 153 ISDEELARFVEHVDKDNNGIITFEEWRDFL 182
I+++++ ++ DK+N+G I ++E+ +F+
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+SK + + + LF FD GY+D +++ L A ++L K D N DGR
Sbjct: 3 DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 62
Query: 106 VDYQEFRRYM 115
+DY EF +M
Sbjct: 63 IDYDEFLEFM 72
Score = 37.0 bits (84), Expect = 0.024, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E EL +F+ D +G I EEL L G I+++++ ++ DK+N+G I ++E+
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 179 RDFL 182
+F+
Sbjct: 69 LEFM 72
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 43 ALRESKEERDIRIRSLFNFFD-AANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDAN 101
A+ + EE+ ++ F+ F A G + ++ + L + +++ D +
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 102 RDGRVDYQEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIE 152
G VD+ EF M D K E EL +F+ D +G I EEL L G
Sbjct: 68 GSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGET 127
Query: 153 ISDEELARFVEHVDKDNNGIITFEEWRDFL 182
I+++++ ++ DK+N+G I ++E+ +F+
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 114 YMDIK-EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGI 172
+MD E EL + F+ D + NG I EL ++ G +++DEE+ + ++ D D +G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 173 ITFEEWRDFLL 183
+ +EE+ ++
Sbjct: 62 VNYEEFVKMMM 72
Score = 32.0 bits (71), Expect = 0.90, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY 114
++ F FD +GY+ +++ + L + + + K D + DG+V+Y+EF +
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
Query: 115 M 115
M
Sbjct: 71 M 71
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 43 ALRESKEERDIRIRSLFNFFD-AANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDAN 101
A+ + EE+ ++ F+ F A G + ++ + L + +++ D +
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 102 RDGRVDYQEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIE 152
G VD+ EF M D K E EL +F+ D +G I EEL L G
Sbjct: 68 GSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGET 127
Query: 153 ISDEELARFVEHVDKDNNGIITFEEWRDFL 182
I+++++ ++ DK+N+G I ++E+ +F+
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 42.7 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E EL + F+ D + NG I EL ++ G +++DEE+ + ++ D D +G + +EE+
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 179 RDFLL 183
++
Sbjct: 63 VKMMM 67
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY 114
++ F FD +GY+ +++ + L + + + K D + DG+V+Y+EF +
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
Query: 115 M 115
M
Sbjct: 66 M 66
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 17/109 (15%)
Query: 89 KYAKDLFKVCDANRDGRVDYQEFRRYMDIK-----EMELYKIFQTIDVEHNGCILPEELW 143
K+A +F V D N+DGR+++ EF + + + + +L F+ D++++G I E+
Sbjct: 63 KFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEML 122
Query: 144 D------ALVKAGIEISDEE------LARFVEHVDKDNNGIITFEEWRD 180
D +V +E+ +EE + R +DK+ +G +T +E+++
Sbjct: 123 DIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 171
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 37 MDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGL-----------SALQIP 85
M L + E+KE + ++F+ D G LD A++ G S L
Sbjct: 348 MGSKLTSQDETKE-----LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 402
Query: 86 AQYKYAKDLFKVCDANRDGRVDYQEFRRY-MDIKEM----ELYKIFQTIDVEHNGCILPE 140
A + D +++G ++Y EF MD K + L + F+ D +++G I
Sbjct: 403 AVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISST 462
Query: 141 ELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLL 183
EL A + ++ E + VDK+N+G + F+E++ LL
Sbjct: 463 EL--ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRR 113
R+ F D NSG L + S L LQ + D+F D + +G VD++EF
Sbjct: 21 RLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVIDIF---DTDGNGEVDFKEFIE 76
Query: 114 YMD------IKEMELYKIFQTIDVEHNGCILPEELWDAL-VKAGIEISDEELARFVE--- 163
+ KE +L F+ D++ +G I EL+ L + G + D +L + V+
Sbjct: 77 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 136
Query: 164 -HVDKDNNGIITFEEW 178
+ DKD +G I+FEE+
Sbjct: 137 INADKDGDGRISFEEF 152
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRR 113
R+ F D NSG L + S L LQ + D+F D + +G VD++EF
Sbjct: 22 RLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVIDIF---DTDGNGEVDFKEFIE 77
Query: 114 YMD------IKEMELYKIFQTIDVEHNGCILPEELWDAL-VKAGIEISDEELARFVE--- 163
+ KE +L F+ D++ +G I EL+ L + G + D +L + V+
Sbjct: 78 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 137
Query: 164 -HVDKDNNGIITFEEW 178
+ DKD +G I+FEE+
Sbjct: 138 INADKDGDGRISFEEF 153
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 37 MDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGL-----------SALQIP 85
M L + E+KE + ++F+ D G LD A++ G S L
Sbjct: 347 MGSKLTSQDETKE-----LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 401
Query: 86 AQYKYAKDLFKVCDANRDGRVDYQEFRRY-MDIKEM----ELYKIFQTIDVEHNGCILPE 140
A + D +++G ++Y EF MD K + L + F+ D +++G I
Sbjct: 402 AVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISST 461
Query: 141 ELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLL 183
EL A + ++ E + VDK+N+G + F+E++ LL
Sbjct: 462 EL--ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 42.0 bits (97), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 17/112 (15%)
Query: 91 AKDLFKVCDANR-------DGRVDYQEFRRYMDIKEM---ELYKIFQTIDVEHNGCILPE 140
AKDL K D + +G ++++F + +K M ++ K+F+ ID + +G I E
Sbjct: 3 AKDLLKADDIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEE 62
Query: 141 EL---WDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEA 189
EL + G +++D E F++ DKD +G I +E+ + HEA
Sbjct: 63 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLV----HEA 110
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE + LF FD GY+D +++ L A ++L K D N DGR
Sbjct: 2 KSEEE----LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 57
Query: 106 VDYQEFRRYM 115
+DY EF +M
Sbjct: 58 IDYDEFLEFM 67
Score = 37.0 bits (84), Expect = 0.024, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E EL +F+ D +G I EEL L G I+++++ ++ DK+N+G I ++E+
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 179 RDFL 182
+F+
Sbjct: 64 LEFM 67
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE + LF FD GY+D +++ L A ++L K D N DGR
Sbjct: 4 KSEEE----LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 59
Query: 106 VDYQEFRRYM 115
+DY EF +M
Sbjct: 60 IDYDEFLEFM 69
Score = 37.0 bits (84), Expect = 0.024, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E EL +F+ D +G I EEL L G I+++++ ++ DK+N+G I ++E+
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 179 RDFL 182
+F+
Sbjct: 66 LEFM 69
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 33 GPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQ-YKYA 91
G + + LAL ++ R++ +F+ FD +G +++ + L A ++
Sbjct: 54 GLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKV 113
Query: 92 KDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGI 151
K FK+ D + G ++ +E +KEM + + ++ +L E++ + +V
Sbjct: 114 KFAFKLYDLRQTGFIEREE------LKEMVVALLHES------ELVLSEDMIEVMVDKA- 160
Query: 152 EISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENI 194
FV+ D+ N+G I +EW+DF+ L P + I+N+
Sbjct: 161 ---------FVQ-ADRKNDGKIDIDEWKDFVSLNP--SLIKNM 191
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 34 PVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL------QIPAQ 87
P + +L+ RE+ + + ++ +DA +SGY+ A++++ L L +IP
Sbjct: 85 PQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPN 144
Query: 88 Y--KYAKDLFKVCDANRDGRVDYQEFRRYMDIKE-----------------MELYKIFQT 128
+Y K+ D N+DGR+D + R + ++E + KIF
Sbjct: 145 KLDEYTDAXXKIFDKNKDGRLDLNDLARILALQENFLLQFKXDASSQVERKRDFEKIFAH 204
Query: 129 IDVEHNGCILPEELWDALVKAGIE-----ISDEELARFVE----HVDKDNNGIITFEE 177
DV G + E+ D VK E IS +L +F E H D + +G I E
Sbjct: 205 YDVSRTGALEGPEV-DGFVKDXXELVRPSISGGDLDKFRECLLTHCDXNKDGKIQKSE 261
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 43 ALRESKEERDIRIRSLFNFFD-AANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDAN 101
A+ + EE+ ++ F+ F A G + ++ + L + +++ D +
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 102 RDGRVDYQEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIE 152
G VD+ EF M D K E EL +F+ D +G I +EL L G
Sbjct: 68 GSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGET 127
Query: 153 ISDEELARFVEHVDKDNNGIITFEEWRDFL 182
I+++++ ++ DK+N+G I ++E+ +F+
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 33 GPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQ-YKYA 91
G + + LAL ++ R++ +F+ FD +G +++ + L A ++
Sbjct: 54 GLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKV 113
Query: 92 KDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGI 151
K FK+ D + G ++ +E +KEM + + ++ +L E++ + +V
Sbjct: 114 KFAFKLYDLRQTGFIEREE------LKEMVVALLHES------ELVLSEDMIEVMVDKA- 160
Query: 152 EISDEELARFVEHVDKDNNGIITFEEWRDFLLLYP 186
FV+ D+ N+G I +EW+DF+ L P
Sbjct: 161 ---------FVQ-ADRKNDGKIDIDEWKDFVSLNP 185
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE + LF FD GY+D +++ L A ++L K D N DGR
Sbjct: 3 KSEEE----LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 58
Query: 106 VDYQEFRRYM 115
+DY EF +M
Sbjct: 59 IDYDEFLEFM 68
Score = 36.2 bits (82), Expect = 0.041, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 115 MDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIIT 174
M E EL +F+ D +G I +EL L G I+++++ ++ DK+N+G I
Sbjct: 1 MGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 175 FEEWRDFL 182
++E+ +F+
Sbjct: 61 YDEFLEFM 68
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 78 GLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVE 132
GL L P+ KY + +F+ D N+DG +D+ E+ + + + +L F+ DV+
Sbjct: 42 GLKNLS-PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVD 100
Query: 133 HNGCILPEELWD------ALVKAGIEISDEELARFV-EHVDKDNNGIITFEEW 178
NGCI EL + A+ + ++ EE V + +D + +G ++ EE+
Sbjct: 101 GNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 43 ALRESKEERDIRIRSLFNFFD-AANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDAN 101
A+ + EE+ ++ F+ F A G + ++ + L + +++ D +
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 102 RDGRVDYQEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIE 152
G VD+ EF M D K E EL +F+ D +G I +EL L G
Sbjct: 68 GSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGET 127
Query: 153 ISDEELARFVEHVDKDNNGIITFEEWRDFL 182
I+++++ ++ DK+N+G I ++E+ +F+
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 37 MDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGL-----------SALQIP 85
M L + E+KE + ++F+ D G LD A++ G S L
Sbjct: 324 MGSKLTSQDETKE-----LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 378
Query: 86 AQYKYAKDLFKVCDANRDGRVDYQEFRRY-MDIKEM----ELYKIFQTIDVEHNGCILPE 140
A + D +++G ++Y EF MD K + L + F+ D +++G I
Sbjct: 379 AVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISST 438
Query: 141 ELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLL 183
EL A + ++ E + VDK+N+G + F+E++ LL
Sbjct: 439 EL--ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 32 SGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYA 91
SG + D +A R S+EE ++ LF D NSG + + +++ GL +
Sbjct: 3 SGHIDDDDKHMAERLSEEEIG-GLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEI 61
Query: 92 KDLFKVCDANRDGRVDYQEF 111
KDL D ++ G +DY EF
Sbjct: 62 KDLMDAADIDKSGTIDYGEF 81
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 60 NFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFR----RYM 115
+F SG + QI L L I + L D +G +D+ F+ R++
Sbjct: 21 DFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFL 80
Query: 116 ------DIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDN 169
+ + EL + F+ D E NG I + + + L + +S E+L ++ +D D
Sbjct: 81 GEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADG 140
Query: 170 NGIITFEEW 178
+G + FEE+
Sbjct: 141 SGTVDFEEF 149
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 55 IRSLFNFF---DAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
I+ L FF D S LD + GL+ L + A+ + + D N G +D +EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 112 RRYM-----DIKEMELYKIFQTIDVEHNGCILPEELWDAL-------VKAGIEISDEELA 159
R + +E + F +D +G + ++L V++G DE L
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLR 155
Query: 160 RFVEHVD-KDNNGIITFEEWRDF 181
RF+++ D + +G +T E++D+
Sbjct: 156 RFLDNFDSSEKDGQVTLAEFQDY 178
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E EL + F+ D + NG I EL + G +++DEE+ + D D +G I +EE+
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Score = 32.3 bits (72), Expect = 0.55, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE ++ F FD +G++ A++ ++ L + ++ + D + DG+
Sbjct: 1 DSEEE----LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 56
Query: 106 VDYQEFRRYMDIK 118
++Y+EF + M K
Sbjct: 57 INYEEFVKVMMAK 69
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 43 ALRESKEERDIRIRSLFNFFD-AANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDAN 101
A+ + EE+ ++ F+ F A G + ++ + L + +++ D +
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 102 RDGRVDYQEFRRYM------DIK---EMELYKIFQTIDVEHNGCILPEELWDALVKAGIE 152
G VD+ EF M D K E EL +F+ D +G I +EL L G
Sbjct: 68 GSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGET 127
Query: 153 ISDEELARFVEHVDKDNNGIITFEEWRDFL 182
I+++++ ++ DK+N+G I ++E +F+
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEXLEFM 157
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 15 LPKMESTRS-----ASCNPVRKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGY 69
LP +ES + + + ++ + M L L E+K+ + +F D N G
Sbjct: 293 LPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQ-----LTEIFRKLDTNNDGM 347
Query: 70 LDYAQIESGLSALQ----------IPAQYKYAKD----LFKVCDANRDGRVDYQEF---- 111
LD ++ G I + +D L + D + G ++Y EF
Sbjct: 348 LDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASA 407
Query: 112 -RRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNN 170
R + + + + F+ D + +G I +EL+ +A I EEL +E VD + +
Sbjct: 408 IDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKD 467
Query: 171 GIITFEEWRDFL 182
G + F E+ + L
Sbjct: 468 GEVDFNEFVEML 479
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSALQI-PAQYKYAKDLFKVCDANRDGRVDYQEFR 112
R+RS+F DA SG L+ + + + L++ PA A+ +F+ DA+RDG + +QEF
Sbjct: 28 RLRSVFAACDANRSGRLEREEFRALCTELRVRPAD---AEAVFQRLDADRDGAITFQEFA 84
Query: 113 R 113
R
Sbjct: 85 R 85
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRY---MDIKEMELYKIFQTIDVEHNGCILPEEL 142
+ +F CDANR GR++ +EFR + ++ + +FQ +D + +G I +E
Sbjct: 30 RSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEF 83
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 44 LRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRD 103
+ ++K + + + + F FD G++D ++ L A + +DL K D N D
Sbjct: 1 MEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 60
Query: 104 GRVDYQEFRRYMD 116
GR+D+ EF + M+
Sbjct: 61 GRIDFDEFLKMME 73
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E EL F+ D +G I EEL + L G + +E++ ++ DK+N+G I F+E+
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 40 VLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDL---FK 96
LL L+ ++ + I ++N FD G++D+ + ++A+ + Q K + L FK
Sbjct: 44 TLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEF---IAAVNLIMQEKMEQKLKWYFK 100
Query: 97 VCDANRDGRVDYQE-FRRYMDIKEME----------LYKIFQTIDVEHNGCILPEELWDA 145
+ DA+ +G +D E +M ++ + + +F ID+ ++G + EE +
Sbjct: 101 LYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFING 160
Query: 146 LVK 148
+ K
Sbjct: 161 MAK 163
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 37/68 (54%)
Query: 116 DIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITF 175
D+ E EL + F+ +D E G I + L L G E++++E+ + D D +G + +
Sbjct: 3 DLDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDY 62
Query: 176 EEWRDFLL 183
EE++ ++
Sbjct: 63 EEFKCLMM 70
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
E +IF+ D +G I EL +AL G I+ +E+ + +D D +G I+F+E+ D
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEFTD 68
Query: 181 F 181
F
Sbjct: 69 F 69
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 23/159 (14%)
Query: 41 LLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGL-----------SALQIPAQYK 89
L + E+KE + ++F+ D G LD A++ G S L A
Sbjct: 328 LTSQDETKE-----LTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEH 382
Query: 90 YAKDLFKVCDANRDGRVDYQEF-----RRYMDIKEMELYKIFQTIDVEHNGCILPEELWD 144
+ D +++G ++Y EF R + L + F+ D +++G I EL
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTEL-- 440
Query: 145 ALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLL 183
A + ++ E + VDK+N+G + F+E++ LL
Sbjct: 441 ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLL 479
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 112 RRYMDIKEMELYKI---FQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKD 168
+R +DI E EL +I F+ D + NG I +EL A+ G ++ EL ++ +D D
Sbjct: 25 QRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMD 84
Query: 169 NNGIITFEEWRDFL 182
+G + FEE+ L
Sbjct: 85 GDGQVDFEEFVTLL 98
Score = 30.0 bits (66), Expect = 3.5, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
IR F FD +G++ ++ + + +L + + + D + DG+VD++EF
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEF 94
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E EL + F+ D + NG I EL + G +++D+E+ + D D +G I +EE+
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
Score = 28.9 bits (63), Expect = 6.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 59 FNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
F FD +G + A++ ++ L ++ + D + DG ++Y+EF R M
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
E + F D + +GCI +EL + G ++ EL + VD D NG I F E+ +
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 181 FL 182
+
Sbjct: 71 LM 72
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 38.1 bits (87), Expect = 0.012, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+GCI +EL + G + EEL ++ VD+D +G + F+EW
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 38.1 bits (87), Expect = 0.013, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E E+ + F+ D + NG I EL + G +++DEE+ + D D +G + +EE+
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Score = 35.8 bits (81), Expect = 0.058, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE IR F FD +GY+ A++ ++ L + ++ + D + DG+
Sbjct: 2 DSEEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 57
Query: 106 VDYQEFRRYM 115
V+Y+EF + M
Sbjct: 58 VNYEEFVQMM 67
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 38.1 bits (87), Expect = 0.013, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E E+ + F+ D + NG I EL + G +++DEE+ + D D +G + +EE+
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Score = 36.6 bits (83), Expect = 0.032, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE IR F FD +GY+ A++ ++ L + ++ + D + DG+
Sbjct: 5 DSEEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 106 VDYQEFRRYMDIK 118
V+Y+EF + M K
Sbjct: 61 VNYEEFVQMMTAK 73
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E E+ + F+ D + NG I EL + G +++DEE+ + D D +G + +EE+
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Score = 36.6 bits (83), Expect = 0.034, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE IR F FD +GY+ A++ ++ L + ++ + D + DG+
Sbjct: 6 DSEEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 61
Query: 106 VDYQEFRRYMDIK 118
V+Y+EF + M K
Sbjct: 62 VNYEEFVQMMTAK 74
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E E+ + F+ D + NG I EL + G +++DEE+ + D D +G + +EE+
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Score = 35.8 bits (81), Expect = 0.062, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE IR F FD +GY+ A++ ++ L + ++ + D + DG+
Sbjct: 2 DSEEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 57
Query: 106 VDYQEFRRYM 115
V+Y+EF + M
Sbjct: 58 VNYEEFVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E E+ + F+ D + NG I EL + G +++DEE+ + D D +G + +EE+
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Score = 36.6 bits (83), Expect = 0.034, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE IR F FD +GY+ A++ ++ L + ++ + D + DG+
Sbjct: 3 DSEEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 58
Query: 106 VDYQEFRRYMDIK 118
V+Y+EF + M K
Sbjct: 59 VNYEEFVQMMTAK 71
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+GCI +EL + G + EEL ++ VD+D +G + F+EW
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
++ +IF+ D +G I EL DAL G S +E+ R + +D D +G I F E+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 181 F 181
F
Sbjct: 63 F 63
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
++ +IF+ D +G I EL DAL G S +E+ R + +D D +G I F E+
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 181 F 181
F
Sbjct: 62 F 62
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E E+ + F+ D + NG I EL + G +++DEE+ + D D +G + +EE+
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Score = 35.8 bits (81), Expect = 0.057, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY 114
IR F FD +GY+ A++ ++ L + ++ + D + DG+V+Y+EF +
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 115 MDIK 118
M K
Sbjct: 64 MTAK 67
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI 117
LFN FDA +G + + GLS L ++ K F + D N+DG + +E
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM------ 187
Query: 118 KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEE 177
+ + K + H IL E DA + E + RF + +D++ +G++T +E
Sbjct: 188 --LAIMKSIYDMMGRHTYPILRE---DAPL--------EHVERFFQKMDRNQDGVVTIDE 234
Query: 178 WRDFLLLYPHEATIENIYHHWERV 201
FL + I N +E V
Sbjct: 235 ---FLETCQKDENIMNSMQLFENV 255
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 120 MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
++ + F D + +GCI EEL + ++EEL + VD D NG I F+E+
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
Score = 29.3 bits (64), Expect = 6.0, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + + F FD G + ++ + + +L + +D+ DA+ +G +++
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 109 QEFRRYMDIK 118
EF M K
Sbjct: 66 DEFLSLMAKK 75
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 120 MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
++ + F D + +GCI EEL + ++EEL + VD D NG I F+E+
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
Score = 28.9 bits (63), Expect = 6.2, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + + F FD G + ++ + + +L + +D+ DA+ +G +++
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 109 QEFRRYMDIK 118
EF M K
Sbjct: 66 DEFLSLMAKK 75
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 80 SALQIPAQYKYAKDLFKVCDANRDGRVDYQE----------FRRYM-DIK--EMELYKIF 126
S L + K D+FK D N DG++D +E F+ + ++K E E+ I
Sbjct: 346 SKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNIL 405
Query: 127 QTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEE 177
+ +D + NG I E + I S+E L R D D +G IT EE
Sbjct: 406 KEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEE 456
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 34 PVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKD 93
V MD +L E R+R FN FD SG + ++ + I K D
Sbjct: 423 SVCMDKQILFSEE-------RLRRAFNLFDTDKSGKITKEELANLFGLTSISE--KTWND 473
Query: 94 LFKVCDANRDGRVDYQEFRRYM 115
+ D N+D +D+ EF M
Sbjct: 474 VLGEADQNKDNMIDFDEFVSMM 495
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F FD G + Y+Q + AL Q ++ KV + ++
Sbjct: 5 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRAL---GQNPTNAEVMKVLGNPKSDEMNL 61
Query: 109 Q--EFRRYMDIKEM-----------ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISD 155
+ +F +++ + + + + + D E NG ++ E+ LV G ++++
Sbjct: 62 KTLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 121
Query: 156 EELARFVEHVDKDNNGIITFEE 177
EE+ + V +D+NG I +EE
Sbjct: 122 EEVEQLVAG-HEDSNGCINYEE 142
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 37.4 bits (85), Expect = 0.021, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F FD G + Y+Q + AL Q ++ KV + ++
Sbjct: 3 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRAL---GQNPTNAEVMKVLGNPKSDEMNL 59
Query: 109 Q--EFRRYMDIKEM-----------ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISD 155
+ +F +++ + + + + + D E NG ++ E+ LV G ++++
Sbjct: 60 KTLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 119
Query: 156 EELARFVEHVDKDNNGIITFEE 177
EE+ + V +D+NG I +EE
Sbjct: 120 EEVEQLVAG-HEDSNGCINYEE 140
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 37.0 bits (84), Expect = 0.028, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 108 YQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDK 167
+Q + D +E E+ + F+ D + NG I EL + G +++DEE+ + D
Sbjct: 18 FQSLMKDTDSEE-EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 76
Query: 168 DNNGIITFEEW 178
D +G + +EE+
Sbjct: 77 DGDGQVNYEEF 87
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 41 LLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDA 100
L+ +S+EE IR F D +GY+ A++ ++ L + ++ + D
Sbjct: 21 LMKDTDSEEE----IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 76
Query: 101 NRDGRVDYQEFRRYMDIK 118
+ DG+V+Y+EF + M K
Sbjct: 77 DGDGQVNYEEFVQMMTAK 94
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 36.6 bits (83), Expect = 0.034, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 21/146 (14%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF-- 111
+I+ F FD N G + ++ S L +L K+ G+++ +EF
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSL--------GKNPTNAELNTIKGQLNAKEFDL 57
Query: 112 -------RRYMDI---KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARF 161
R+ + + E+ F+ +D E NG I EL L+ G ++ E+
Sbjct: 58 ATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEEL 117
Query: 162 VEHVDKDNNGIITFEEWRDFLLL-YP 186
++ V +G I +E + D L+ YP
Sbjct: 118 MKEVSVSGDGAINYESFVDMLVTGYP 143
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 36.2 bits (82), Expect = 0.050, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
E EE+ IR F+ FDA +G +D +++ + AL + + K + D G+
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGK 83
Query: 106 VDYQEFRRYMDIK 118
+++ +F M K
Sbjct: 84 MNFGDFLTVMTQK 96
Score = 32.7 bits (73), Expect = 0.51, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 118 KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEE 177
++ E+ + F D + G I +EL A+ G E EE+ + + +DK+ G + F
Sbjct: 29 QKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG- 87
Query: 178 WRDFL 182
DFL
Sbjct: 88 --DFL 90
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 35.8 bits (81), Expect = 0.054, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+ EL + F+ D E NG I + + + L + +S E+L ++ +D D +G + FEE+
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 62 FDAANSGYLDYAQIESGLSALQIPAQY--------KYAKDLFKVCDANRDGRVDYQEFRR 113
+D +SG+++ ++++ L L A +Y + K+ D+N DG+++ E R
Sbjct: 112 YDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMAR 171
Query: 114 YMDIKE-------------MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEEL 158
+ ++E E K F+ D + NG I EL DAL+K E + +EL
Sbjct: 172 LLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL-DALLKDLCEKNKQEL 228
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 89 KYAKDLFKVCDANRDGRVDYQEFRRYMDIK-----EMELYKIFQTIDVEHNGCILPEELW 143
K+A+ +F+ DAN DG +D++EF + + E +L F D++ NG I E+
Sbjct: 63 KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEML 122
Query: 144 D------ALVKAGIEISDEE------LARFVEHVDKDNNGIITFEEW 178
+ +V + +++ ++E + +D + +G ++ EE+
Sbjct: 123 EIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 33 GPVTMDHVLLALR-ESKEERDIRIRSLFNFFDAANSGYLDYAQI--------ESGLSALQ 83
G + ++AL S+ + + +++ F+ +D +GY+ A++ + S ++
Sbjct: 78 GTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMK 137
Query: 84 IPAQY----KYAKDLFKVCDANRDGRVDYQEFRR 113
+P K + +F+ D NRDG++ +EF R
Sbjct: 138 MPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 35.4 bits (80), Expect = 0.081, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E F D + G I +EL + G + EEL +E VD+D +G I FEE+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 35.4 bits (80), Expect = 0.081, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 107 DYQEFRRYMDIKEM--ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEH 164
D Q R +EM E F D + G I +EL + G + EEL +E
Sbjct: 5 DQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE 64
Query: 165 VDKDNNGIITFEEW 178
VD+D +G I FEE+
Sbjct: 65 VDEDGSGTIDFEEF 78
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 35.0 bits (79), Expect = 0.085, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 91 AKDLFKVCDANRDGRVDYQEFRRYMDIK-----EMELYKIFQTIDVEHNGCILPEEL 142
A+ LFK D N DG V Y+E + ++ K E L IF++ID + NG I E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Score = 30.0 bits (66), Expect = 2.8, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 57 SLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY 114
+LF D G + Y ++++ +S + + + +FK DA+ +G +D EF ++
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 125 IFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFV-EHVDKDNNGIITFEEWRDF 181
+F+ IDV +G + EE+ A V I +E+L + + + +D D NG I E+ F
Sbjct: 5 LFKEIDVNGDGAVSYEEV-KAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 45 RESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQ------------IPAQYKYAK 92
R+ E R LF FD +G L + ++ G + + + AK
Sbjct: 43 RDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAK 102
Query: 93 DL-FKVCDANRDGRVDYQEFRRYM----DIKEMELYKIFQTIDVEHNGCILPEELWDALV 147
DL KV + V++ EFR + DI EL +F T+D + + + +E +AL
Sbjct: 103 DLGNKVKGVGEEDLVEFLEFRLMLCYIYDI--FELTVMFDTMDKDGSLLLELQEFKEALP 160
Query: 148 KA---GIEISDEELARFVEHVDKDNNGIITFEEW 178
K G++I+D +D + +G++TF+E+
Sbjct: 161 KLKEWGVDITD--ATTVFNEIDTNGSGVVTFDEF 192
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI 117
LFN FD +G + + + LS L ++ + F + D N+DG ++ +E MDI
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM---MDI 150
Query: 118 KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELAR-----FVEHVDKDNNGI 172
+ ++D + K + E+ R F + +DK+ +GI
Sbjct: 151 ---------------------VKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 189
Query: 173 ITFEEW 178
+T +E+
Sbjct: 190 VTLDEF 195
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 17/165 (10%)
Query: 30 RKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDA----ANSGYLDYAQIESGLSALQIP 85
R S ++H + SK+E I + SL N + NS L A + S L
Sbjct: 283 RISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQ 342
Query: 86 AQYKYAKDLFKVCDANRDGRVDYQEF-RRYMDIK------------EMELYKIFQTIDVE 132
+ K D+F+ D N DG++D QE Y + E E+ I D +
Sbjct: 343 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFD 402
Query: 133 HNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEE 177
NG I E + +S ++L + D+D NG I+ +E
Sbjct: 403 RNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDE 447
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 6 AGHAVERVGLPKMESTRSA--SCNPVRKSGPVTM-DHVLLAL-RESKEERDIRIRSLFNF 61
+G V LP++ES A ++G + + V +A+ R+S +D ++ S F
Sbjct: 376 SGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD-KLESAFQK 434
Query: 62 FDAANSGYLDYAQIES--GLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
FD +G + ++ S GL L+ K K++ D+N DG VD++EF
Sbjct: 435 FDQDGNGKISVDELASVFGLDHLE----SKTWKEMISGIDSNNDGDVDFEEF 482
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.0 bits (79), Expect = 0.11, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSAL---QIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
+R F FD G + +++ + AL Q+ ++ +++ + D N DGRVD++EF
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMRALLGHQV--GHRDIEEIIRDVDLNGDGRVDFEEF 147
Query: 112 RRYM 115
R M
Sbjct: 148 VRMM 151
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 35.0 bits (79), Expect = 0.11, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G+ ++ EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 28.9 bits (63), Expect = 7.5, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 31/67 (46%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F+ +D G + ++ + + +L + +D+ DA+ +G +D+
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
Query: 109 QEFRRYM 115
EF M
Sbjct: 66 PEFLTMM 72
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 21/138 (15%)
Query: 27 NPVRKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQ--- 83
+ V G + + LAL ++ ++ + +F+ FD ++G L + + LS
Sbjct: 59 SAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA 118
Query: 84 -IPAQYKYAKDLFKVCDANRDGRVDYQEFRRY---------MDIKEMELY----KIFQTI 129
I + ++ F++ D + G ++ QE ++ M++K+ + K F+
Sbjct: 119 PIDDKIHFS---FQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEA 175
Query: 130 DVEHNGCILPEELWDALV 147
D +H+G I EE W +LV
Sbjct: 176 DTKHDGKIDKEE-WRSLV 192
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 117 IKEME-LYKIFQTID--VEHNGCILPEELWDALVKAGIEISDEEL--ARFVEHVDKDNNG 171
+ E+E LY++F+ I V +G I EE AL K E L R + D +NG
Sbjct: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN---KKESLFADRVFDLFDTKHNG 100
Query: 172 IITFEEW-RDFLLLYPHEATIENIYHHWERVCLVDIGEQAVI 212
I+ FEE+ R + +P+ + I+ ++ L D+ +Q I
Sbjct: 101 ILGFEEFARALSVFHPNAPIDDKIHFSFQ---LYDLKQQGFI 139
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 59 FNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
F FD G++ ++ ++ L P + + + D ++DGRV+Y+EF R +
Sbjct: 12 FRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 68
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+L F+ D + +G I +EL A+ G + EEL + D D +G + +EE+
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 34.7 bits (78), Expect = 0.14, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 46 ESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR 105
+S+EE IR F FD +GY+ A + ++ L + ++ + D + DG+
Sbjct: 4 DSEEE----IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 59
Query: 106 VDYQEFRRYMDIK 118
V+Y++F + M K
Sbjct: 60 VNYEDFVQMMTAK 72
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 34.3 bits (77), Expect = 0.16, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 119 EMELYKIFQTIDVEHNGCILPEELWDALVKAGIE-ISDEELARFVEHVDKDNNGIITFEE 177
E E+ + F+ D +G I +E + K G E ++D E+ ++ D+D NG+I E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 178 WRDFL 182
+ D +
Sbjct: 67 FMDLI 71
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 26 CNPVRKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQ-- 83
+ V G + + LAL ++ ++ + +F+ FD ++G L + + LS
Sbjct: 27 SSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPN 86
Query: 84 --IPAQYKYAKDLFKVCDANRDGRVDYQEFRRY---------MDIKEMELY----KIFQT 128
I + ++ F++ D + G ++ QE ++ M++K+ + K F+
Sbjct: 87 APIDDKIHFS---FQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEE 143
Query: 129 IDVEHNGCILPEELWDALV 147
D +H+G I EE W +LV
Sbjct: 144 ADTKHDGKIDKEE-WRSLV 161
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 117 IKEME-LYKIFQTID--VEHNGCILPEELWDALVKAGIEISDEEL--ARFVEHVDKDNNG 171
+ E+E LY++F+ I V +G I EE AL K E L R + D +NG
Sbjct: 13 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN---KKESLFADRVFDLFDTKHNG 69
Query: 172 IITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVI 212
I+ FEE+ L ++ A I++ H L D+ +Q I
Sbjct: 70 ILGFEEFARALSVFHPNAPIDDKIHF--SFQLYDLKQQGFI 108
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+GCI +EL + G + EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+GCI +EL + G + EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 25/124 (20%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDL---FKVCDANRDGRVDYQEFRRY 114
+FN FDA +GY+D+ + + AL + ++ + L F++ D + +G + Y E R
Sbjct: 68 VFNVFDADKNGYIDFKEF---ICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRI 124
Query: 115 MDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIIT 174
+D +YK+ ++ LPE+ + ++ + + +DK+ +G +T
Sbjct: 125 VDA----IYKMVGSM------VKLPEDE---------DTPEKRVNKIFNMMDKNKDGQLT 165
Query: 175 FEEW 178
EE+
Sbjct: 166 LEEF 169
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 89 KYAKDLFKVCDANRDGRVDYQ----EFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWD 144
++ K FK C + + ++Q +F + D Y +F D + NG I +E
Sbjct: 29 QWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEY-VFNVFDADKNGYIDFKEFIC 87
Query: 145 AL-VKAGIEISDEELARFVEHVDKDNNGIITFEE 177
AL V + E++D+ + F + D DNNG+I+++E
Sbjct: 88 ALSVTSRGELNDKLIWAF-QLYDLDNNGLISYDE 120
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 33.9 bits (76), Expect = 0.20, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+GCI +EL + G + EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI 117
LFN FD +G + + + LS L ++ + F + D N+DG ++ +E MDI
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM---MDI 114
Query: 118 KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELAR-----FVEHVDKDNNGI 172
+ ++D + K + E+ R F + +DK+ +GI
Sbjct: 115 ---------------------VKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 153
Query: 173 ITFEEW 178
+T +E+
Sbjct: 154 VTLDEF 159
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI 117
LFN FD +G + + + LS L ++ + F + D N+DG ++ +E MDI
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM---MDI 117
Query: 118 KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELAR-----FVEHVDKDNNGI 172
+ ++D + K + E+ R F + +DK+ +GI
Sbjct: 118 ---------------------VKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 156
Query: 173 ITFEEW 178
+T +E+
Sbjct: 157 VTLDEF 162
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 33.9 bits (76), Expect = 0.21, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+GCI +EL + G + EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 24/154 (15%)
Query: 45 RESKEERDIRIRSLFNFFDAANSGYLDYAQIESG-LSALQIPAQYKYAKDLFK-VCDANR 102
RE E R LF FD +G L Y ++ SG L L++ +D+ K D +R
Sbjct: 40 REKTAEAKQRRIELFKKFDKNETGKLXYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSR 99
Query: 103 --------DGRVDYQEFRRYM-------DIKEMELYKIFQTIDVEHNGCILPEELWDALV 147
G D+ EF + D EL +F ID N + EE A+
Sbjct: 100 TLGSKLENKGSEDFVEFLEFRLMLCYIYDF--FELTVMFDEIDASGNMLVDEEEFKRAVP 157
Query: 148 KA---GIEISDEELARFVEHVDKDNNGIITFEEW 178
K G ++ D A + +DK+ G +TF+E+
Sbjct: 158 KLEAWGAKVEDP--AALFKELDKNGTGSVTFDEF 189
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G ++ EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 58 LFNFF---DAANSGYLDYAQIESGLS-ALQIPAQYKYAKDLFKVCDANRDGRVDYQEFR- 112
L+N F D SG + +++ LS P + + + D V++ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 113 --RYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNN 170
+Y+ + +F+T D +++G I EL AL AG +SD+ + D+
Sbjct: 69 VWKYI----TDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGR 124
Query: 171 GIITFEE 177
G I F++
Sbjct: 125 GQIAFDD 131
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G ++ EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G ++ EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 33.5 bits (75), Expect = 0.25, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G ++ EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 33.5 bits (75), Expect = 0.25, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 110 EFRRYMDIKEMELYK-IFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKD 168
E ++ + +E + YK FQ D +++ + EEL + G + ++++ V+ DKD
Sbjct: 3 EQKKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKD 62
Query: 169 NNGIITFEEWRDFLLLYPHE 188
N+G E + +L Y E
Sbjct: 63 NSGKFDQETFLTIMLEYGQE 82
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 33.5 bits (75), Expect = 0.25, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G ++ EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 33.5 bits (75), Expect = 0.25, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G ++ EL + VD D NG I F E+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 33.5 bits (75), Expect = 0.25, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G ++ EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYMDIK-----EMELYKIFQTIDVEHNGCILPEELWD 144
+A LF V D + +G + ++EF + E +L F+ D+ H+G I +E+
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Query: 145 ------ALVKAGIEISDEE------LARFVEHVDKDNNGIITFEEWRD 180
++ + + ++++E + + + +DK+ +G IT +E+R+
Sbjct: 124 IVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 17/102 (16%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM-- 115
LF FD N+G++ + + + LS + F++ D N DG + + E +
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 116 ---------------DIKEMELYKIFQTIDVEHNGCILPEEL 142
EM + KIF+ +D +G I +E
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 33.5 bits (75), Expect = 0.28, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 91 AKDLFKVCDANRDGRVDYQEFRRYM-----DIKEMELYKIFQTIDVEHNGCILPEELWDA 145
AK +F+ D N+DG++ EFR + ++ K F+ IDV+ NG + +E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 146 LVK 148
+ K
Sbjct: 63 IEK 65
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 33.5 bits (75), Expect = 0.29, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D + +G I +EL + G ++ EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 33.5 bits (75), Expect = 0.32, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 116 DIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITF 175
D KE E+ K F+ D + G I + L + G ++DEEL ++ D+D +G ++
Sbjct: 18 DTKE-EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSE 76
Query: 176 EEW 178
+E+
Sbjct: 77 QEF 79
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
+Y+ F +D + +G + EL GI +S + R + D D NG I+F E
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYE--- 108
Query: 181 FLLLYPHEATIENIY 195
F+ +Y N++
Sbjct: 109 FMAMYKFMELAYNLF 123
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 33.1 bits (74), Expect = 0.36, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSAL---QIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
+R F FD G + +++ + L Q+ ++ +++ + D N DGRVD++EF
Sbjct: 104 LRDAFREFDTNGDGEISTSELREAMRKLLGHQV--GHRDIEEIIRDVDLNGDGRVDFEEF 161
Query: 112 RRYM 115
R M
Sbjct: 162 VRMM 165
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
+Y+ F +D + +G + EL GI +S + R + D D NG I+F E
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYE--- 108
Query: 181 FLLLYPHEATIENIY 195
F+ +Y N++
Sbjct: 109 FMAMYKFMELAYNLF 123
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE + ++F FD +D+ + + L+ + K FK+ D +R+G +D
Sbjct: 55 EEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDR 114
Query: 109 QEFRRYMDIKEMELYKIFQT----IDVEHNGCIL-PEELWDALVKAGIEISDEELA--RF 161
QE +DI E +YK+ + ++ E G +L PEE+ D + E D +L+ F
Sbjct: 115 QEL---LDIVE-SIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170
Query: 162 VEHVDKD 168
VE +D
Sbjct: 171 VEGARRD 177
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSAL---QIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
+R F FD G + +++ + L Q+ ++ +++ + D N DGRVD++EF
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMRKLLGHQV--GHRDIEEIIRDVDLNGDGRVDFEEF 147
Query: 112 RRYM 115
R M
Sbjct: 148 VRMM 151
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 116 DIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITF 175
D KE E+ K F+ D + G I + L + G ++DEEL ++ D+D +G ++
Sbjct: 8 DTKE-EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSE 66
Query: 176 EEW 178
+E+
Sbjct: 67 QEF 69
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.1 bits (74), Expect = 0.41, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 107 DYQEFRRYMDIKEM--ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEH 164
D Q R +EM E F D + G I + L + G + EEL +E
Sbjct: 5 DQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEE 64
Query: 165 VDKDNNGIITFEEW 178
VD+D +G I FEE+
Sbjct: 65 VDEDGSGTIDFEEF 78
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRD 180
E F D + G + E+ L+ G + + E AR + VD + G++TF+ + D
Sbjct: 726 EFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFID 785
Query: 181 FL 182
F+
Sbjct: 786 FM 787
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 12 RVGLPKMESTRSASCNPVRKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLD 71
RVG ++ +T + + N V ++ +T D ++ + E R+ FN FD +G +D
Sbjct: 690 RVGWEQLLTTIARTINEV-ENQILTRDAKGISQEQMNE-----FRASFNHFDRKKTGMMD 743
Query: 72 YAQIESGLSALQIP-AQYKYAKDLFKVCDANRDGRVDYQEFRRYM 115
+ L ++ + ++A+ + + D NR G V +Q F +M
Sbjct: 744 CEDFRACLISMGYNMGEAEFAR-IMSIVDPNRMGVVTFQAFIDFM 787
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCILPEELWD 144
YA+ +F+ DAN DG +D++E+ + + +L F DV+ NG I E+ +
Sbjct: 64 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 145 ALVKAGIEISDEELARFVEHVDKDNN 170
+ IS E+ +H+ +D N
Sbjct: 124 IVTAIFKMISPED----TKHLPEDEN 145
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 32.7 bits (73), Expect = 0.49, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQ---YKYAKDLFKVCDANRDGRVDYQE 110
+++ +F F D SGYLD +++ L Q A+ K L D + DG++ E
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
Query: 111 FR 112
F+
Sbjct: 102 FQ 103
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 32.7 bits (73), Expect = 0.50, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 55 IRSLFNFFDAANSGYLDYAQIESGLSAL---QIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
+R F FD G + +++ + L Q+ ++ +++ + D N DGRVD++EF
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQV--GHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 112 RRYM 115
R M
Sbjct: 67 VRMM 70
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCILPEELWD 144
YA+ +F+ DAN DG +D++E+ + + +L F DV+ NG I E+ +
Sbjct: 64 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 145 ALVKAGIEISDEELARFVEHVDKDNN 170
+ IS E+ +H+ +D N
Sbjct: 124 IVTAIFKMISPED----TKHLPEDEN 145
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCILPEELWD 144
YA+ +F+ DAN DG +D++E+ + + +L F DV+ NG I E+ +
Sbjct: 65 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 124
Query: 145 ALVKAGIEISDEELARFVEHVDKDNN 170
+ IS E+ +H+ +D N
Sbjct: 125 IVTAIFKMISPED----TKHLPEDEN 146
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCILPEELWD 144
YA+ +F+ DAN DG +D++E+ + + +L F DV+ NG I E+ +
Sbjct: 64 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 145 ALVKAGIEISDEELARFVEHVDKDNN 170
+ IS E+ +H+ +D N
Sbjct: 124 IVTAIFKMISPED----TKHLPEDEN 145
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 32.3 bits (72), Expect = 0.60, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF+F+D + G +D +I L I + +D+F V ++ G + ++EF
Sbjct: 17 LFDFWDGRD-GAVDAFKIGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 72
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDEE+ + D
Sbjct: 73 EGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQ 132
Query: 167 KDNNGIITFEEWRDFLLLYPH 187
+D G + +EE+ ++ P+
Sbjct: 133 EDLEGNVKYEEFVKKVMTGPY 153
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF+F+D + G +D +I L I + +D+F V ++ G + ++EF
Sbjct: 18 LFDFWDGRD-GAVDAFKIGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 73
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDEE+ + D
Sbjct: 74 EGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQ 133
Query: 167 KDNNGIITFEEWRDFLLLYPH 187
+D G + +EE+ ++ P+
Sbjct: 134 EDLEGNVKYEEFVKKVMTGPY 154
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 32.0 bits (71), Expect = 0.72, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQ---YKYAKDLFKVCDANRDGRVDYQE 110
+++ +F F D SGYLD +++ L + A+ K L D + DG++ +E
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEE 102
Query: 111 FR 112
F+
Sbjct: 103 FQ 104
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 32.0 bits (71), Expect = 0.72, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ I+ F+ FD +G +DY +++ + AL + +L D +G + +
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGF 62
Query: 109 QEFRRYMDIK 118
+F M K
Sbjct: 63 DDFLDIMTEK 72
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 32.0 bits (71), Expect = 0.77, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 121 ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
E + F D ++NG I EL + G+ S+ E+ + +D D N I F E+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Score = 30.0 bits (66), Expect = 3.1, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 31/67 (46%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDY 108
EE+ + F FD N+G + +++ + + +L + DL D + + ++++
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 109 QEFRRYM 115
EF M
Sbjct: 66 SEFLALM 72
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 32.0 bits (71), Expect = 0.78, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYMD 116
+DL K D N DGR+D+ EF + M+
Sbjct: 8 EDLMKDSDKNNDGRIDFDEFLKMME 32
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 32.0 bits (71), Expect = 0.83, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+GCI +EL G + EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 24/100 (24%)
Query: 140 EELWDALVKAGIEISDEELARFVEH---------------VDKDNNGIITFEEWRDFL-- 182
E W A ++ +++ +EL ++ ++ VDKD NG IT +EW+ +
Sbjct: 78 ETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKA 137
Query: 183 --LLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHV 220
++ E E RVC +D Q + E +H+
Sbjct: 138 AGIIQSSEDCEETF-----RVCDIDESGQLDVDEXTRQHL 172
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 125 IFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLL 183
+++ +DV+ +G + EE+ K GI E++A V D + +G IT EE+ +F L
Sbjct: 10 LYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEFSL 64
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRY---MDIKEMELYKIFQTIDVEHNGCILPEELWDAL 146
K + +CD N DG+++ EF + + + + E + F +D NG + +EL A+
Sbjct: 105 KGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAV 162
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 124 KIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
++F +D HNG + E++ L GI+ D + R ++ +D ++ G IT+ E+
Sbjct: 43 ELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITYTEF 95
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 84 IPAQYKYAKDLFKVCDANRDGRVDYQEFRRYM---DIKEMELYKIFQTIDVEHNGCILPE 140
I KY +LF D N +G + ++E + IK+ ++ +I Q +D+ G I
Sbjct: 34 INNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYT 93
Query: 141 ELWDALVKAGIEISDEELARFVEHVDKDNNGIIT 174
E + I L +DKD +G I+
Sbjct: 94 EFMAGCYRWK-NIESTFLKAAFNKIDKDEDGYIS 126
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCILPEELWD 144
YA+ +F+ DAN DG +D++++ + + +L F DV+ NG I E+ +
Sbjct: 64 YAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 145 ALVKAGIEISDEELARFVEHVDKDNN 170
+ IS E+ +H+ +D N
Sbjct: 124 IVTAIFKMISPED----TKHLPEDEN 145
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF+F+D + G +D ++ L I + +D+F V ++ G + ++EF
Sbjct: 17 LFDFWDGRD-GAVDAFKLGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 72
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDEE+ + D
Sbjct: 73 EGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQ 132
Query: 167 KDNNGIITFEEWRDFLLLYPH 187
+D G + +EE+ ++ P+
Sbjct: 133 EDLEGNVKYEEFVKKVMAGPY 153
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 24/100 (24%)
Query: 140 EELWDALVKAGIEISDEELARFVEH---------------VDKDNNGIITFEEWRDFL-- 182
E W A ++ +++ +EL ++ ++ VDKD NG IT +EW+ +
Sbjct: 78 ETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKA 137
Query: 183 --LLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHV 220
++ E E RVC +D Q + E +H+
Sbjct: 138 AGIIQSSEDCEETF-----RVCDIDESGQLDVDEMTRQHL 172
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 53 IRI--RSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQE 110
IRI +LF+ D +G + + ++ A I + ++ F+VCD + G++D E
Sbjct: 107 IRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
Query: 111 FRR 113
R
Sbjct: 167 MTR 169
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 90 YAKDLFKVCDANRDGRVDYQEFRRYMDI-----KEMELYKIFQTIDVEHNGCILPEELWD 144
YA+ +F+ DAN DG +D++++ + + +L F DV+ NG I E+ +
Sbjct: 64 YAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 145 ALVKAGIEISDEELARFVEHVDKDNN 170
+ IS E+ +H+ +D N
Sbjct: 124 IVTAIFKMISPED----TKHLPEDEN 145
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 58 LFNFF---DAANSGYLDYAQIESGLS-ALQIPAQYKYAKDLFKVCDANRDGRVDYQEFR- 112
L+N F D SG + +++ LS P + + + D V++ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 113 --RYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNN 170
+Y+ + +F+T D +++G I EL AL G +SD+ + D+
Sbjct: 69 VWKYI----TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 124
Query: 171 GIITFEE 177
G I F++
Sbjct: 125 GQIAFDD 131
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 121 ELYKIFQTIDVEHNGCILPEEL--WDALVKAGIE-ISDEELARFVEHVDKDNNGIITFEE 177
++ K F ID + +G I +EL + + KAG ++D E F++ D D +G I EE
Sbjct: 43 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 102
Query: 178 W 178
W
Sbjct: 103 W 103
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 121 ELYKIFQTIDVEHNGCILPEEL--WDALVKAGIE-ISDEELARFVEHVDKDNNGIITFEE 177
++ K F ID + +G I +EL + + KAG ++D E F++ D D +G I EE
Sbjct: 42 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 101
Query: 178 W 178
W
Sbjct: 102 W 102
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSAL---QIPAQYKYAKDLFKVCDANRDGRVDYQEFRRY 114
LFN FD ++G + + GLS L + + +A F + D N+DG
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWA---FNLYDINKDGY--------- 154
Query: 115 MDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIIT 174
I + E+ I + I C P DA + + F + +DK+ +G++T
Sbjct: 155 --ITKEEMLDIMKAIYDMMGKCTYPVLKEDA--------PRQHVETFFQKMDKNKDGVVT 204
Query: 175 FEEW 178
+E+
Sbjct: 205 IDEF 208
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 6 AGHAVERVGLPKMESTRSA--SCNPVRKSGPVT-MDHVLLAL-RESKEERDIRIRSLFNF 61
+G V LP++ES A ++G + + V +A+ R+S +D ++ S F
Sbjct: 93 SGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD-KLESAFQK 151
Query: 62 FDAANSGYLDYAQIES--GLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEF 111
FD +G + ++ S GL L+ K K++ D+N DG VD++EF
Sbjct: 152 FDQDGNGKISVDELASVFGLDHLE----SKTWKEMISGIDSNNDGDVDFEEF 199
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 80 SALQIPAQYKYAKDLFKVCDANRDGRVDYQEF-RRYMDIK------------EMELYKIF 126
S L + K D+F+ D N DG++D QE Y + E E+ I
Sbjct: 54 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 113
Query: 127 QTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEE 177
D + NG I E + +S ++L + D+D NG I+ +E
Sbjct: 114 GAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDE 164
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 59 FNFFDAANSGYLDYAQIES--GLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMD 116
F FFD +G + +++ G ++ P K L + D N DG +D+ EF M
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Query: 117 IKE 119
K+
Sbjct: 195 KKK 197
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDI 117
LFN FD +G + + + LS L ++ + F + D N+DG ++ +E MDI
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM---MDI 114
Query: 118 KEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELAR-----FVEHVDKDNNGI 172
+ ++D + + E+ R F + +DK+ +GI
Sbjct: 115 ---------------------VKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGI 153
Query: 173 ITFEEW 178
+T +E+
Sbjct: 154 VTLDEF 159
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 58 LFNFF---DAANSGYLDYAQIESGLS-ALQIPAQYKYAKDLFKVCDANRDGRVDYQEFR- 112
L+N F D SG + +++ LS P + + + D V++ EF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 113 --RYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNN 170
+Y+ + +F+T D +++G I EL AL G +SD+ + D+
Sbjct: 65 VWKYI----TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 120
Query: 171 GIITFEE 177
G I F++
Sbjct: 121 GQIAFDD 127
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 58 LFNFF---DAANSGYLDYAQIESGLS-ALQIPAQYKYAKDLFKVCDANRDGRVDYQEFR- 112
L+N F D SG + +++ LS P + + + D V++ EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 113 --RYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNN 170
+Y+ + +F+T D +++G I EL AL G +SD+ + D+
Sbjct: 66 VWKYI----TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 121
Query: 171 GIITFEE 177
G I F++
Sbjct: 122 GQIAFDD 128
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 58 LFNFF---DAANSGYLDYAQIESGLS-ALQIPAQYKYAKDLFKVCDANRDGRVDYQEFR- 112
L+N F D SG + +++ LS P + + + D V++ EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 113 --RYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNN 170
+Y+ + +F+T D +++G I EL AL G +SD+ + D+
Sbjct: 87 VWKYI----TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 142
Query: 171 GIITFEE 177
G I F++
Sbjct: 143 GQIAFDD 149
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 49 EERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL-QIPAQYKYAKDLFKVCDANRDGRVD 107
EE+ + F+ FD G + ++ + + +L Q P + + +D+ DA+ DG +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGDGTID 64
Query: 108 YQEFRRYM 115
+ EF M
Sbjct: 65 FPEFLTMM 72
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 58 LFNFF---DAANSGYLDYAQIESGLS-ALQIPAQYKYAKDLFKVCDANRDGRVDYQEFR- 112
L+N F D SG + +++ LS P + + + D V++ EF
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 113 --RYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNN 170
+Y+ + +F+T D +++G I EL AL G +SD+ + D+
Sbjct: 88 VWKYI----TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 143
Query: 171 GIITFEE 177
G I F++
Sbjct: 144 GQIAFDD 150
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 53 IRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFR 112
++ R LFN D SG+L Q + L +P Q + A ++ + D ++DG++ +EF
Sbjct: 14 LKYRQLFNSHDKTMSGHLTGPQARTILMQSSLP-QAQLAS-IWNLSDIDQDGKLTAEEF- 70
Query: 113 RYMDIKEMELYKIFQTIDVEHNGCILPEEL 142
I M L IDV +G LP L
Sbjct: 71 ----ILAMHL------IDVAMSGQPLPPVL 90
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 140 EELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
+EL + G ++ D E+AR +E +D++ + + F+E+ FL
Sbjct: 35 KELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFL 77
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 92 KDLFKVCDANRDGRVDYQEFRRYMDIK------EMELYKIFQTIDVEHNGCILPEELWDA 145
+D+ DA+ +G +D+ EF M K E E+ + F+ D + NG I EL
Sbjct: 4 QDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 63
Query: 146 LVKAG 150
+ G
Sbjct: 64 MTNLG 68
Score = 29.3 bits (64), Expect = 5.0, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 121 ELYKIFQTIDVEHNGCI-LPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWR 179
EL + +D + NG I PE L K S+EE+ DKD NG I+ E R
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 180 DFL 182
+
Sbjct: 62 HVM 64
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF+F+D + G +D ++ L I + +D+F V ++ G + ++EF
Sbjct: 15 LFDFWDGRD-GAVDAFKLGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 70
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDE++ ++ D
Sbjct: 71 EGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQ 130
Query: 167 KDNNGIITFEEWRDFLLLYPH 187
+D G + +E++ ++ P+
Sbjct: 131 EDLEGNVKYEDFVKKVMAGPY 151
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 30.0 bits (66), Expect = 3.2, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF+F+D + G +D ++ L I + +D+F V ++ G + ++EF
Sbjct: 14 LFDFWDGRD-GAVDAFKLGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 69
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDE++ ++ D
Sbjct: 70 EGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQ 129
Query: 167 KDNNGIITFEEWRDFLLLYPH 187
+D G + +E++ ++ P+
Sbjct: 130 EDLEGNVKYEDFVKKVMAGPY 150
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF+F+D + G +D ++ L I + +D+F V ++ G + ++EF
Sbjct: 17 LFDFWDGRD-GAVDAFKLGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 72
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDE++ ++ D
Sbjct: 73 EGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQ 132
Query: 167 KDNNGIITFEEWRDFLLLYPH 187
+D G + +E++ ++ P+
Sbjct: 133 EDLEGNVKYEDFVKKVMAGPY 153
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF+F+D + G +D ++ L I + +D+F V ++ G + ++EF
Sbjct: 17 LFDFWDGRD-GAVDAFKLGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 72
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDE++ ++ D
Sbjct: 73 EGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQ 132
Query: 167 KDNNGIITFEEWRDFLLLYPH 187
+D G + +E++ ++ P+
Sbjct: 133 EDLEGNVKYEDFVKKVMAGPY 153
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 24/100 (24%)
Query: 140 EELWDALVKAGIEISDEELARFVEH---------------VDKDNNGIITFEEWRDFL-- 182
E W ++ ++ EEL R+ ++ +DKD NG I+ +EW+ +
Sbjct: 78 ETEWPEYIEGWKRLASEELKRYSKNQITLIRLWGDALFDIIDKDQNGAISLDEWKAYTKS 137
Query: 183 --LLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHV 220
++ E E RVC +D Q + E +H+
Sbjct: 138 AGIIQSSEDCEETF-----RVCDIDESGQLDVDEMTRQHL 172
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+G I +EL + G + EEL ++ VD+D +G + F+E+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+G I +EL + G + EEL ++ VD+D +G + F+E+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 29.6 bits (65), Expect = 3.7, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF+F+D + G +D ++ L I + +D+F V ++ G + ++EF
Sbjct: 14 LFDFWDGRD-GAVDAFKLGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 69
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDE++ ++ D
Sbjct: 70 EGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQ 129
Query: 167 KDNNGIITFEEW 178
+D G + +E++
Sbjct: 130 EDLEGNVKYEDF 141
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 134 NGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEW 178
+G I +EL + G + EEL ++ VD+D +G + F+E+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 28/151 (18%)
Query: 54 RIRSLFNFFDAANSGYLDYAQIESGLSAL------QIPAQYKYAKD----LFKVCDANRD 103
R + +F++ D +G + +I S S PAQ + +D F+ C
Sbjct: 21 RHKFMFDYLDINGNGQITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFFRGCGLEYG 80
Query: 104 GRVDYQEF-RRYMDIKEMELYK---------------IFQTIDVEHNGCILPEELWDALV 147
+ EF + ++ +L K +F D + +G I +E W A
Sbjct: 81 KETKFPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDE-WKAYG 139
Query: 148 K-AGIEISDEELARFVEHVDKDNNGIITFEE 177
+ +GI S+E+ + +H D DN+G + +E
Sbjct: 140 RISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
>pdb|3DRX|A Chain A, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRX|B Chain B, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRX|C Chain C, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRX|D Chain D, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRX|E Chain E, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRY|A Chain A, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
pdb|3DRY|B Chain B, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
pdb|3DRY|C Chain C, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
pdb|3DRY|D Chain D, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
pdb|3DRY|E Chain E, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
Length = 202
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 7/106 (6%)
Query: 166 DKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRSKY 225
DKD G + RD P + N H + V D+ E+ V+ E ++
Sbjct: 51 DKDETGAYLID--RDPTYFGP----VLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIK 104
Query: 226 FIAGGIAGAASRTATAPLDRLKVVLQVQTAQ-ARLVPTIRKIWKEE 270
+ I S+T+ P+ + VLQ Q + ++V T+ WK E
Sbjct: 105 LVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE 150
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 140 EELWDALVKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFL 182
+EL + G ++ D E+AR E +D++ + + F+E+ FL
Sbjct: 35 KELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFL 77
>pdb|3CG7|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
pdb|3CG7|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
pdb|3CM5|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Mn
pdb|3CM5|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Mn
pdb|3CM6|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Er
pdb|3CM6|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Er
Length = 308
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 73 AQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVE 132
AQ + LS +Q+PA ++ +L+K+ N R+ +E +I +M Y TI
Sbjct: 130 AQYQMKLSNIQMPAFFRQYINLYKIF-TNEMDRMGPKELSATTNIGKMNEYYDLPTIGRA 188
Query: 133 HNG---CILPEELWDALVKAGIEISDEEL 158
H+ C+ + ++ G +++ EL
Sbjct: 189 HDAMDDCLNIATILQRMINMGAKVTVNEL 217
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 28.9 bits (63), Expect = 7.2, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 107 DYQEFRRYMDIKEM--ELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEH 164
D Q R +EM E F D + G I +EL + G + EL +
Sbjct: 5 DQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICE 64
Query: 165 VDKDNNGIITFEEW 178
VD+D +G I FEE+
Sbjct: 65 VDEDGSGTIDFEEF 78
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 28.9 bits (63), Expect = 7.6, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 58 LFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGR--VDYQEF---- 111
LF F+D + G +D ++ L I + +D+F V ++ G + ++EF
Sbjct: 17 LFAFWDGRD-GAVDAFKLGDVCRCLGINPR---NEDVFAVGGTHKMGEKSLPFEEFLPAY 72
Query: 112 RRYMDIKE---MELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVD-- 166
MD ++ + + F+T D E G I EL L G +SDE++ ++ D
Sbjct: 73 EGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQ 132
Query: 167 KDNNGIITFEEWRDFLLLYPH 187
+D G + +E++ ++ P+
Sbjct: 133 EDLEGNVKYEDFVKKVMAGPY 153
>pdb|3LVY|A Chain A, Crystal Structure Of Carboxymuconolactone Decarboxylase
Family Protein Smu.961 From Streptococcus Mutans
pdb|3LVY|B Chain B, Crystal Structure Of Carboxymuconolactone Decarboxylase
Family Protein Smu.961 From Streptococcus Mutans
pdb|3LVY|C Chain C, Crystal Structure Of Carboxymuconolactone Decarboxylase
Family Protein Smu.961 From Streptococcus Mutans
pdb|3LVY|D Chain D, Crystal Structure Of Carboxymuconolactone Decarboxylase
Family Protein Smu.961 From Streptococcus Mutans
pdb|3LVY|E Chain E, Crystal Structure Of Carboxymuconolactone Decarboxylase
Family Protein Smu.961 From Streptococcus Mutans
pdb|3LVY|F Chain F, Crystal Structure Of Carboxymuconolactone Decarboxylase
Family Protein Smu.961 From Streptococcus Mutans
Length = 207
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 377 GLVPSLLGIIPYAGIDLAAYETLKDLSRTYILTDSEPGPLVQLGCGTISGALGATCV 433
G +P+L+G++ A L Y T+ +++R LT +E +VQ+ +G A CV
Sbjct: 51 GYIPNLIGLLANAPTALETYRTVGEINRRNSLTPTE-REVVQITAAVTNGC--AFCV 104
>pdb|3LGJ|A Chain A, Crystal Structure Of Single-Stranded Binding Protein (Ssb)
From Bartonella Henselae
pdb|3LGJ|B Chain B, Crystal Structure Of Single-Stranded Binding Protein (Ssb)
From Bartonella Henselae
Length = 169
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 147 VKAGIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHH 197
+ +G E+ + +A F +++K+ + + EW ++ PH A I Y H
Sbjct: 41 MTSGAEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNPHFAKIALQYLH 91
>pdb|1WI0|A Chain A, Solution Structure Of The Pb1 Domain Of Mouse Mitogen
Activated Protein Kinase Kinase 5 (Map2k5)
Length = 113
Score = 28.5 bits (62), Expect = 9.6, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 354 KAPNLGTLTKDILVHEGPRAFYKGLVPSLLGIIPYAGIDLAAYETLKDLSRTYILTDSEP 413
K PN G + D VH GP+ ++ ++ + ++P A YE +D R + +D E
Sbjct: 22 KIPNSGAV--DWTVHSGPQLLFRDVLDVIGQVLPEATTTAFEYED-EDGDRITVRSDEEM 78
Query: 414 GPLVQLGCGTI-SGALGATCVYPLQV 438
++ T+ + + PLQ+
Sbjct: 79 KAMLSYYYSTVMEQQVNGQLIEPLQI 104
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,742,180
Number of Sequences: 62578
Number of extensions: 610206
Number of successful extensions: 2483
Number of sequences better than 100.0: 261
Number of HSP's better than 100.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 1762
Number of HSP's gapped (non-prelim): 554
length of query: 504
length of database: 14,973,337
effective HSP length: 103
effective length of query: 401
effective length of database: 8,527,803
effective search space: 3419649003
effective search space used: 3419649003
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)