Query 040620
Match_columns 214
No_of_seqs 106 out of 1133
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 16:19:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040620.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040620hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fp2a1 a.4.5.29 (A:8-108) Iso 99.8 1.7E-20 1.3E-24 133.9 4.5 95 10-113 3-97 (101)
2 d1kyza2 c.66.1.12 (A:120-362) 99.7 2.5E-18 1.9E-22 140.7 10.6 98 115-214 3-115 (243)
3 d1fp1d2 c.66.1.12 (D:129-372) 99.7 1.4E-18 1E-22 142.5 8.5 99 115-214 2-115 (244)
4 d1fp2a2 c.66.1.12 (A:109-352) 99.7 5.3E-17 3.9E-21 132.9 8.8 98 116-214 2-114 (244)
5 d1tw3a1 a.4.5.29 (A:14-98) Car 99.7 9.5E-17 6.9E-21 110.9 7.1 77 21-113 6-82 (85)
6 d1qzza1 a.4.5.29 (A:10-101) Ac 99.6 1.9E-16 1.4E-20 110.8 5.5 85 15-113 6-90 (92)
7 d1fp1d1 a.4.5.29 (D:19-128) Ch 99.6 9.2E-16 6.7E-20 110.1 6.7 98 12-113 2-106 (110)
8 d1kyza1 a.4.5.29 (A:13-119) Ca 99.5 1.6E-15 1.2E-19 108.4 4.6 98 12-113 3-104 (107)
9 d1qzza2 c.66.1.12 (A:102-357) 99.5 3.2E-15 2.3E-19 122.8 6.6 98 114-214 2-115 (256)
10 d1tw3a2 c.66.1.12 (A:99-351) C 99.5 5.5E-14 4E-18 114.8 8.2 83 129-214 17-114 (253)
11 d1mkma1 a.4.5.33 (A:1-75) Tran 98.2 3.3E-07 2.4E-11 60.5 2.8 56 39-104 8-63 (75)
12 d2o57a1 c.66.1.18 (A:16-297) P 97.7 2.9E-05 2.1E-09 62.6 6.5 54 156-212 45-98 (282)
13 d1nkva_ c.66.1.21 (A:) Hypothe 97.5 6.2E-05 4.5E-09 59.3 6.1 42 168-212 23-64 (245)
14 d2fcaa1 c.66.1.53 (A:10-213) t 97.5 4.8E-05 3.5E-09 59.1 4.7 32 181-212 30-61 (204)
15 d1yzha1 c.66.1.53 (A:8-211) tR 97.5 5.1E-05 3.7E-09 58.9 4.7 32 181-212 32-63 (204)
16 d1im8a_ c.66.1.14 (A:) Hypothe 97.5 4.6E-05 3.4E-09 59.3 4.5 34 179-212 38-73 (225)
17 d1p91a_ c.66.1.33 (A:) rRNA me 97.3 0.00013 9.4E-09 58.5 5.3 34 179-212 83-116 (268)
18 d1g8sa_ c.66.1.3 (A:) Fibrilla 97.1 0.00016 1.1E-08 57.0 4.3 35 178-212 72-106 (230)
19 d1u2za_ c.66.1.31 (A:) Catalyt 97.1 0.00023 1.7E-08 60.7 5.5 45 167-213 205-249 (406)
20 d2b3ta1 c.66.1.30 (A:2-275) N5 97.1 0.00039 2.8E-08 56.2 6.4 34 179-212 107-140 (274)
21 d2gh1a1 c.66.1.49 (A:13-293) M 97.1 0.00014 1.1E-08 58.6 3.7 44 168-212 16-60 (281)
22 d1kpia_ c.66.1.18 (A:) CmaA2 { 97.0 0.00037 2.7E-08 56.7 5.8 43 167-212 50-92 (291)
23 d1wzna1 c.66.1.43 (A:1-251) Hy 97.0 0.00036 2.6E-08 54.4 5.5 41 168-212 31-71 (251)
24 d1nt2a_ c.66.1.3 (A:) Fibrilla 97.0 0.00044 3.2E-08 53.5 5.8 35 178-212 54-88 (209)
25 d1dusa_ c.66.1.4 (A:) Hypothet 97.0 0.0003 2.2E-08 53.4 4.7 39 170-212 44-82 (194)
26 d2fk8a1 c.66.1.18 (A:22-301) M 97.0 0.0004 2.9E-08 56.1 5.7 43 168-213 42-84 (280)
27 d1kpga_ c.66.1.18 (A:) CmaA1 { 96.9 0.00049 3.5E-08 55.8 5.7 42 168-212 52-93 (285)
28 d1nw3a_ c.66.1.31 (A:) Catalyt 96.9 0.00055 4E-08 56.5 6.1 43 168-212 141-183 (328)
29 d1l3ia_ c.66.1.22 (A:) Precorr 96.9 0.00036 2.6E-08 52.7 4.3 39 170-212 25-63 (186)
30 d1ve3a1 c.66.1.43 (A:2-227) Hy 96.9 0.00064 4.7E-08 51.7 5.4 31 180-212 37-67 (226)
31 d1z05a1 a.4.5.63 (A:10-80) Tra 96.8 0.00027 2E-08 45.2 2.6 47 38-88 8-54 (71)
32 d1biaa1 a.4.5.1 (A:1-63) Bioti 96.8 0.00043 3.1E-08 43.4 3.5 55 38-102 7-61 (63)
33 d1y8ca_ c.66.1.43 (A:) Putativ 96.8 0.00031 2.3E-08 54.9 3.5 32 179-212 36-67 (246)
34 d1j5ya1 a.4.5.1 (A:3-67) Putat 96.8 0.00047 3.4E-08 43.4 3.4 55 39-103 10-64 (65)
35 d2i6ga1 c.66.1.44 (A:1-198) Pu 96.8 0.00067 4.9E-08 51.4 4.9 33 178-212 28-60 (198)
36 d2nxca1 c.66.1.39 (A:1-254) Pr 96.7 0.00094 6.9E-08 53.2 5.4 53 154-212 98-150 (254)
37 d1zx0a1 c.66.1.16 (A:8-236) Gu 96.7 0.00042 3.1E-08 54.0 3.2 32 180-212 53-84 (229)
38 d2avna1 c.66.1.41 (A:1-246) Hy 96.7 0.00054 3.9E-08 52.9 3.7 32 179-212 41-72 (246)
39 d1xtpa_ c.66.1.42 (A:) Hypothe 96.6 0.00084 6.1E-08 53.2 4.5 42 168-212 83-124 (254)
40 d2h00a1 c.66.1.54 (A:5-254) Me 96.6 0.00072 5.3E-08 53.7 4.0 34 179-212 60-93 (250)
41 d2hoea1 a.4.5.63 (A:10-71) N-a 96.5 0.0007 5.1E-08 42.2 2.9 45 40-89 3-47 (62)
42 d1yb2a1 c.66.1.13 (A:6-255) Hy 96.5 0.0015 1.1E-07 51.9 5.4 57 155-213 58-119 (250)
43 d1xvaa_ c.66.1.5 (A:) Glycine 96.5 0.00093 6.8E-08 53.7 4.2 32 179-212 55-86 (292)
44 d2ex4a1 c.66.1.42 (A:2-224) Ad 96.5 0.00057 4.2E-08 52.7 2.8 34 178-212 58-91 (222)
45 d1dl5a1 c.66.1.7 (A:1-213) Pro 96.5 0.0016 1.2E-07 50.2 5.4 42 169-212 66-108 (213)
46 d1lnwa_ a.4.5.28 (A:) MexR rep 96.5 0.0031 2.3E-07 45.2 6.6 62 38-104 38-99 (141)
47 d1z6ra1 a.4.5.63 (A:12-81) Mlc 96.4 0.001 7.5E-08 42.3 3.1 47 38-88 7-53 (70)
48 d1ub9a_ a.4.5.28 (A:) Hypothet 96.4 0.00025 1.8E-08 48.3 -0.1 64 36-104 16-79 (100)
49 d2fyta1 c.66.1.6 (A:238-548) P 96.4 0.0035 2.5E-07 50.8 6.9 35 178-213 33-67 (311)
50 d1lvaa3 a.4.5.35 (A:511-574) C 96.3 0.0012 8.5E-08 41.4 3.0 45 41-88 12-57 (64)
51 d1i9ga_ c.66.1.13 (A:) Probabl 96.3 0.0028 2.1E-07 50.6 6.1 44 167-212 85-129 (264)
52 d1o54a_ c.66.1.13 (A:) Hypothe 96.3 0.003 2.2E-07 50.5 6.0 44 167-212 92-136 (266)
53 d1r1ua_ a.4.5.5 (A:) Metal-sen 96.2 0.00077 5.6E-08 45.6 1.7 54 30-88 12-65 (94)
54 d1r1ta_ a.4.5.5 (A:) SmtB repr 96.2 0.0011 8.3E-08 45.0 2.4 53 31-88 18-70 (98)
55 d2bzga1 c.66.1.36 (A:17-245) T 96.1 0.0025 1.8E-07 49.2 4.7 33 178-212 43-75 (229)
56 d1jqea_ c.66.1.19 (A:) Histami 96.1 0.0025 1.8E-07 50.6 4.7 31 182-212 42-78 (280)
57 d2etha1 a.4.5.28 (A:1-140) Put 96.1 0.0016 1.1E-07 46.6 3.0 68 37-113 33-100 (140)
58 d1ne2a_ c.66.1.32 (A:) Hypothe 96.0 0.0021 1.6E-07 49.2 3.6 31 181-212 49-79 (197)
59 d1sfxa_ a.4.5.50 (A:) Hypothet 95.9 0.0011 8E-08 45.8 1.4 44 41-88 25-68 (109)
60 d1u2wa1 a.4.5.5 (A:12-119) Cad 95.9 0.0015 1.1E-07 45.2 2.0 56 29-88 24-79 (108)
61 d1ulya_ a.4.5.58 (A:) Hypothet 95.9 0.0024 1.7E-07 48.1 3.2 70 30-104 13-83 (190)
62 d1xd7a_ a.4.5.55 (A:) Hypothet 95.8 0.0024 1.8E-07 45.1 3.0 43 42-88 10-52 (127)
63 d1s3ja_ a.4.5.28 (A:) Putative 95.8 0.0086 6.3E-07 42.7 6.1 65 40-113 39-103 (143)
64 d1oria_ c.66.1.6 (A:) Protein 95.8 0.0039 2.8E-07 50.7 4.4 33 180-213 33-65 (316)
65 d2d1ha1 a.4.5.50 (A:1-109) Hyp 95.7 0.0013 9.6E-08 45.2 1.2 36 50-88 35-70 (109)
66 d1wy7a1 c.66.1.32 (A:4-204) Hy 95.7 0.0042 3.1E-07 47.4 4.2 32 180-212 46-77 (201)
67 d2b25a1 c.66.1.13 (A:6-329) Hy 95.6 0.0073 5.3E-07 49.5 5.7 56 155-212 71-131 (324)
68 d1vlma_ c.66.1.41 (A:) Possibl 95.5 0.0074 5.4E-07 45.3 5.0 26 181-212 37-62 (208)
69 d1i1na_ c.66.1.7 (A:) Protein- 95.5 0.012 8.8E-07 45.5 6.3 43 170-212 66-109 (224)
70 d1ku9a_ a.4.5.36 (A:) DNA-bind 95.4 0.0051 3.7E-07 44.2 3.4 46 40-88 30-75 (151)
71 d3broa1 a.4.5.28 (A:3-137) Tra 95.4 0.0093 6.7E-07 42.0 4.8 67 39-113 32-99 (135)
72 d1g6q1_ c.66.1.6 (1:) Arginine 95.4 0.0065 4.7E-07 49.5 4.4 33 180-213 38-70 (328)
73 d2fbha1 a.4.5.28 (A:8-144) Tra 95.4 0.0075 5.4E-07 42.6 4.2 64 42-113 34-97 (137)
74 d2bv6a1 a.4.5.28 (A:5-140) Tra 95.3 0.005 3.6E-07 43.7 3.1 61 39-104 37-97 (136)
75 d1g8aa_ c.66.1.3 (A:) Fibrilla 95.3 0.0053 3.8E-07 47.8 3.4 35 178-212 71-106 (227)
76 d2p4wa1 a.4.5.64 (A:1-194) Tra 95.2 0.0052 3.8E-07 46.5 3.1 64 36-104 15-79 (194)
77 d2cfxa1 a.4.5.32 (A:1-63) Tran 95.2 0.0052 3.8E-07 38.1 2.4 46 38-87 7-52 (63)
78 d2hr3a1 a.4.5.28 (A:2-146) Pro 95.1 0.0037 2.7E-07 44.9 1.8 69 37-113 35-103 (145)
79 d2a14a1 c.66.1.15 (A:5-261) In 95.0 0.0023 1.7E-07 49.7 0.5 34 178-212 49-82 (257)
80 d2a61a1 a.4.5.28 (A:5-143) Tra 95.0 0.0076 5.6E-07 42.8 3.4 65 40-113 34-98 (139)
81 d1lj9a_ a.4.5.28 (A:) Transcri 94.9 0.0058 4.2E-07 43.9 2.4 59 41-104 34-92 (144)
82 d2cyya1 a.4.5.32 (A:5-64) Puta 94.9 0.0052 3.8E-07 37.7 1.8 47 37-87 4-50 (60)
83 d1ylfa1 a.4.5.55 (A:5-142) Hyp 94.8 0.0075 5.5E-07 43.0 2.9 46 50-104 22-67 (138)
84 d1i1ga1 a.4.5.32 (A:2-61) LprA 94.8 0.0048 3.5E-07 37.9 1.6 46 38-87 5-50 (60)
85 d2isya1 a.4.5.24 (A:2-64) Iron 94.8 0.013 9.3E-07 36.3 3.6 37 49-88 21-57 (63)
86 d2cg4a1 a.4.5.32 (A:4-66) Regu 94.8 0.0059 4.3E-07 37.8 1.9 46 38-87 7-52 (63)
87 d1nv8a_ c.66.1.30 (A:) N5-glut 94.7 0.012 8.5E-07 47.1 4.0 32 180-212 110-141 (271)
88 d3deua1 a.4.5.28 (A:2-141) Tra 94.6 0.0086 6.3E-07 42.5 2.7 65 41-113 36-100 (140)
89 d1jgsa_ a.4.5.28 (A:) Multiple 94.5 0.0086 6.3E-07 42.5 2.6 66 39-113 37-102 (138)
90 d2ev0a1 a.4.5.24 (A:2-62) Mang 94.5 0.0092 6.7E-07 36.7 2.3 43 42-88 13-55 (61)
91 d3ctaa1 a.4.5.28 (A:5-89) Ta10 94.4 0.0088 6.4E-07 39.3 2.2 48 50-104 20-67 (85)
92 d1ws6a1 c.66.1.46 (A:15-185) M 94.3 0.02 1.4E-06 42.2 4.3 33 178-212 39-71 (171)
93 d2g72a1 c.66.1.15 (A:18-280) P 94.2 0.0071 5.2E-07 47.7 1.7 40 172-212 46-85 (263)
94 d1j75a_ a.4.5.19 (A:) Dlm-1 {M 94.1 0.009 6.5E-07 35.4 1.5 48 38-88 3-50 (57)
95 d1r7ja_ a.4.5.49 (A:) Sso10a ( 94.0 0.0075 5.5E-07 40.2 1.2 49 50-113 17-65 (90)
96 d1jsxa_ c.66.1.20 (A:) Glucose 94.0 0.028 2E-06 43.0 4.7 34 179-212 64-97 (207)
97 d1vbfa_ c.66.1.7 (A:) Protein- 94.0 0.037 2.7E-06 42.8 5.4 39 169-211 61-99 (224)
98 d1jhfa1 a.4.5.2 (A:2-72) LexA 93.9 0.017 1.2E-06 36.5 2.8 40 46-88 19-59 (71)
99 d1r18a_ c.66.1.7 (A:) Protein- 93.8 0.047 3.4E-06 42.0 5.7 43 170-212 70-118 (223)
100 d2hzta1 a.4.5.69 (A:4-98) Puta 93.5 0.034 2.5E-06 37.1 3.9 74 21-113 5-79 (95)
101 d1dpua_ a.4.5.16 (A:) C-termin 93.4 0.025 1.8E-06 35.6 2.7 45 50-103 22-67 (69)
102 d2frna1 c.66.1.47 (A:19-278) H 93.3 0.028 2E-06 44.4 3.7 33 179-212 106-138 (260)
103 d2fbia1 a.4.5.28 (A:5-140) Pro 93.1 0.0059 4.3E-07 43.2 -0.7 65 40-113 34-98 (136)
104 d1z91a1 a.4.5.28 (A:8-144) Org 92.7 0.0091 6.6E-07 42.3 -0.2 64 41-113 38-101 (137)
105 d1xdza_ c.66.1.20 (A:) Glucose 92.3 0.043 3.1E-06 42.8 3.4 35 178-212 68-102 (239)
106 d1jg1a_ c.66.1.7 (A:) Protein- 92.3 0.083 6E-06 40.4 5.0 41 169-212 69-109 (215)
107 d2gxba1 a.4.5.19 (A:140-198) Z 92.3 0.057 4.1E-06 32.5 3.1 44 41-88 7-50 (59)
108 d1yuba_ c.66.1.24 (A:) rRNA ad 92.2 0.018 1.3E-06 45.2 0.9 42 167-212 18-59 (245)
109 d1yyva1 a.4.5.69 (A:9-122) Put 91.8 0.043 3.2E-06 37.9 2.6 79 16-113 13-92 (114)
110 d1hsja1 a.4.5.28 (A:373-487) S 91.8 0.039 2.8E-06 37.9 2.3 51 50-104 47-97 (115)
111 d2fpoa1 c.66.1.46 (A:10-192) M 91.7 0.071 5.2E-06 39.4 3.9 31 181-212 44-74 (183)
112 d2frha1 a.4.5.28 (A:102-216) P 91.5 0.038 2.8E-06 37.9 2.0 62 43-112 40-102 (115)
113 d1uira_ c.66.1.17 (A:) Spermid 91.4 0.056 4.1E-06 43.7 3.2 34 179-212 76-109 (312)
114 d2cl5a1 c.66.1.1 (A:3-216) Cat 91.3 0.077 5.6E-06 40.4 3.8 34 180-213 56-90 (214)
115 d1q1ha_ a.4.5.41 (A:) Transcri 91.2 0.039 2.8E-06 36.3 1.7 45 41-88 23-67 (88)
116 d1bl0a1 a.4.1.8 (A:9-62) MarA 91.1 0.03 2.2E-06 33.1 0.9 40 42-84 9-49 (54)
117 d1p4xa2 a.4.5.28 (A:126-250) S 91.0 0.026 1.9E-06 39.5 0.7 60 41-104 38-98 (125)
118 d1xmka1 a.4.5.19 (A:294-366) Z 90.6 0.066 4.8E-06 33.9 2.3 58 37-103 6-64 (73)
119 d2fxaa1 a.4.5.28 (A:6-167) Pro 90.4 0.018 1.3E-06 42.2 -0.7 64 41-113 46-109 (162)
120 d1p4xa1 a.4.5.28 (A:1-125) Sta 90.2 0.084 6.1E-06 36.6 2.8 47 40-89 38-85 (125)
121 d2fbka1 a.4.5.28 (A:8-179) Tra 90.2 0.037 2.7E-06 40.7 0.9 36 50-88 78-113 (172)
122 d2fswa1 a.4.5.69 (A:3-104) Hyp 90.2 0.045 3.3E-06 37.0 1.3 79 16-113 9-88 (102)
123 d2f2ea1 a.4.5.69 (A:5-146) Hyp 90.0 0.084 6.1E-06 37.8 2.7 75 19-113 12-86 (142)
124 d1sfua_ a.4.5.19 (A:) 34L {Yab 89.7 0.12 8.8E-06 32.2 2.9 43 42-88 16-58 (70)
125 d1zyba1 a.4.5.4 (A:148-220) Pr 89.3 0.17 1.2E-05 31.7 3.5 35 51-88 27-61 (73)
126 d2hs5a1 a.4.5.6 (A:25-93) Puta 89.3 0.19 1.4E-05 31.0 3.7 36 50-88 24-59 (69)
127 d2avda1 c.66.1.1 (A:44-262) CO 89.1 0.16 1.2E-05 38.7 4.1 36 178-213 57-93 (219)
128 d2gaua1 a.4.5.4 (A:152-232) Tr 89.1 0.23 1.7E-05 31.3 4.2 36 50-88 28-63 (81)
129 d2zcwa1 a.4.5.4 (A:118-199) Tr 89.0 0.17 1.2E-05 32.2 3.5 36 50-88 28-63 (82)
130 d1i5za1 a.4.5.4 (A:138-206) Ca 88.8 0.15 1.1E-05 31.4 3.0 35 51-88 29-63 (69)
131 d2p41a1 c.66.1.25 (A:8-264) An 88.6 0.19 1.4E-05 39.3 4.0 41 170-212 58-98 (257)
132 d1mjfa_ c.66.1.17 (A:) Putativ 88.5 0.15 1.1E-05 40.3 3.5 33 179-212 71-103 (276)
133 d1z7ua1 a.4.5.69 (A:1-108) Hyp 88.3 0.06 4.4E-06 36.7 0.8 80 15-113 7-87 (108)
134 d1cf7a_ a.4.5.17 (A:) Cell cyc 88.3 0.2 1.4E-05 31.1 3.2 36 50-88 24-60 (67)
135 d2as0a2 c.66.1.51 (A:73-396) H 88.2 0.2 1.4E-05 40.4 4.1 33 179-212 144-176 (324)
136 d1iy9a_ c.66.1.17 (A:) Spermid 88.1 0.15 1.1E-05 40.3 3.2 34 179-212 74-107 (274)
137 d2o07a1 c.66.1.17 (A:16-300) S 87.7 0.16 1.1E-05 40.5 3.1 34 179-212 77-110 (285)
138 d3bwga1 a.4.5.6 (A:5-82) Trans 87.6 0.31 2.3E-05 30.7 4.1 36 50-88 20-56 (78)
139 d1d5ya1 a.4.1.8 (A:3-56) Rob t 87.5 0.08 5.8E-06 31.1 0.9 38 41-81 8-46 (54)
140 d1inla_ c.66.1.17 (A:) Spermid 87.4 0.17 1.2E-05 40.5 3.2 35 179-213 88-122 (295)
141 d2b2ca1 c.66.1.17 (A:3-314) Sp 87.3 0.18 1.3E-05 40.7 3.2 34 179-212 105-138 (312)
142 d1hw1a1 a.4.5.6 (A:5-78) Fatty 87.3 0.29 2.1E-05 30.7 3.7 36 50-88 25-61 (74)
143 d1ft9a1 a.4.5.4 (A:134-213) CO 87.1 0.34 2.5E-05 30.5 4.0 36 50-88 29-64 (80)
144 d2fhpa1 c.66.1.46 (A:1-182) Pu 86.5 0.41 3E-05 35.1 4.8 32 180-212 41-72 (182)
145 d1xj5a_ c.66.1.17 (A:) Spermid 85.3 0.27 1.9E-05 39.1 3.3 35 179-213 79-113 (290)
146 d3e5ua1 a.4.5.4 (A:148-227) Ch 84.9 0.35 2.5E-05 30.4 3.2 36 50-88 29-64 (80)
147 d1stza1 a.4.5.51 (A:14-100) He 84.7 0.26 1.9E-05 32.1 2.5 37 48-87 20-58 (87)
148 d2f8la1 c.66.1.45 (A:2-329) Hy 83.3 0.46 3.4E-05 37.7 4.0 33 180-212 117-154 (328)
149 d1susa1 c.66.1.1 (A:21-247) Ca 82.4 0.82 6E-05 34.8 5.0 34 179-212 58-92 (227)
150 d1okra_ a.4.5.39 (A:) Methicil 82.1 0.18 1.3E-05 34.5 0.8 47 38-88 9-59 (120)
151 d2dk5a1 a.4.5.85 (A:8-85) DNA- 81.5 0.35 2.5E-05 30.8 2.0 45 41-88 18-63 (78)
152 d1wxxa2 c.66.1.51 (A:65-382) H 80.2 0.42 3.1E-05 38.3 2.6 31 180-212 145-175 (318)
153 d2obpa1 a.4.5.71 (A:12-92) Put 79.8 0.58 4.3E-05 29.5 2.6 50 49-104 22-71 (81)
154 d2p8ta1 a.4.5.72 (A:14-82) Hyp 79.6 0.96 7E-05 27.9 3.6 36 50-88 16-51 (69)
155 d2igta1 c.66.1.51 (A:1-309) Pu 78.5 0.96 7E-05 36.1 4.3 33 178-212 130-162 (309)
156 d2g9wa1 a.4.5.39 (A:3-124) Hyp 76.6 0.42 3E-05 32.8 1.3 51 38-88 9-60 (122)
157 d1lvaa4 a.4.5.35 (A:575-634) C 76.2 3.5 0.00025 24.5 5.4 44 41-88 9-52 (60)
158 d1i4wa_ c.66.1.24 (A:) Transcr 75.9 1.2 8.4E-05 35.6 4.1 32 180-211 43-74 (322)
159 d1nd9a_ a.6.1.6 (A:) N-termina 74.5 0.46 3.3E-05 27.4 0.9 28 52-85 3-30 (49)
160 d2bgca1 a.4.5.4 (A:138-237) Li 74.5 1.8 0.00013 28.5 4.1 60 26-88 4-66 (100)
161 d1uxda_ a.35.1.5 (A:) Fructose 74.3 1.2 8.5E-05 26.5 2.8 22 52-76 1-22 (59)
162 d2jn6a1 a.4.1.19 (A:1-89) Unch 74.0 0.38 2.8E-05 31.0 0.5 26 50-78 22-47 (89)
163 d1v4ra1 a.4.5.6 (A:1-100) Tran 74.0 0.85 6.2E-05 30.0 2.3 36 50-88 31-67 (100)
164 d1l0oc_ a.4.13.2 (C:) SigmaF { 73.5 0.93 6.8E-05 26.7 2.2 25 50-77 30-54 (57)
165 d1a04a1 a.4.6.2 (A:150-216) Ni 73.4 0.71 5.2E-05 28.0 1.7 33 38-76 11-43 (67)
166 d1xn7a_ a.4.5.62 (A:) Hypothet 72.1 1.9 0.00014 26.8 3.4 44 41-88 7-50 (78)
167 d1gdta1 a.4.1.2 (A:141-183) ga 71.9 1.1 7.7E-05 25.0 2.0 24 50-76 17-40 (43)
168 d1l3la1 a.4.6.2 (A:170-234) Qu 70.3 0.94 6.9E-05 27.2 1.7 33 38-76 9-41 (65)
169 d2b0la1 a.4.5.66 (A:167-257) G 69.8 0.82 6E-05 29.1 1.3 46 40-88 23-68 (91)
170 d1s6la1 a.4.5.79 (A:21-80) Alk 69.5 2.2 0.00016 25.3 3.2 40 42-88 8-47 (60)
171 d1fsea_ a.4.6.2 (A:) Germinati 68.6 1 7.6E-05 27.1 1.7 33 38-76 9-41 (67)
172 d1mzba_ a.4.5.42 (A:) Ferric u 68.0 1.5 0.00011 30.1 2.5 59 40-104 20-84 (134)
173 d2o3fa1 a.4.1.20 (A:1-83) Puta 68.0 0.97 7.1E-05 28.8 1.4 31 50-83 35-65 (83)
174 d2ifta1 c.66.1.46 (A:11-193) P 67.3 2.3 0.00017 30.6 3.8 31 181-212 44-74 (183)
175 d1ku3a_ a.4.13.2 (A:) Sigma70 67.2 1.5 0.00011 26.2 2.1 24 50-76 27-50 (61)
176 d1efaa1 a.35.1.5 (A:2-60) Lac 66.2 1.1 8E-05 26.7 1.3 22 51-75 2-23 (59)
177 d1uwva2 c.66.1.40 (A:75-432) r 66.1 0.82 6E-05 36.6 1.0 32 178-211 210-241 (358)
178 d1p6ra_ a.4.5.39 (A:) Penicill 65.8 1.4 0.0001 27.8 2.0 47 38-88 11-61 (82)
179 d1ldja3 e.40.1.1 (A:411-686) C 65.4 1.3 9.7E-05 34.2 2.1 40 45-88 204-243 (276)
180 d2htja1 a.4.5.73 (A:1-73) P fi 65.1 1.3 9.8E-05 26.8 1.6 45 40-88 4-48 (73)
181 d2hyec3 e.40.1.1 (C:403-675) C 65.0 1.5 0.00011 33.8 2.3 57 44-104 199-257 (273)
182 d1rp3a1 a.4.13.1 (A:87-163) Si 65.0 1.2 8.6E-05 27.6 1.4 31 50-83 25-55 (77)
183 d1yioa1 a.4.6.2 (A:131-200) Re 64.5 1.4 0.0001 26.8 1.7 35 36-76 15-49 (70)
184 d2py6a1 c.66.1.56 (A:14-408) M 64.3 2.9 0.00021 34.3 4.1 34 178-211 210-245 (395)
185 d2b78a2 c.66.1.51 (A:69-385) H 63.6 3.8 0.00028 32.4 4.6 34 179-213 143-176 (317)
186 d2hsga1 a.35.1.5 (A:2-58) Gluc 63.5 1.3 9.8E-05 26.1 1.4 22 52-76 2-23 (57)
187 d2a6ca1 a.35.1.13 (A:1-69) HTH 63.4 1.3 9.6E-05 26.8 1.4 28 43-75 13-40 (69)
188 d1in4a1 a.4.5.11 (A:255-329) H 61.6 4 0.00029 25.4 3.4 38 48-88 19-57 (75)
189 d2dt5a1 a.4.5.38 (A:4-77) Tran 60.8 0.71 5.2E-05 28.9 -0.3 42 40-87 13-55 (74)
190 d2ozua1 d.108.1.1 (A:507-776) 60.2 5.2 0.00038 30.9 4.7 50 25-88 186-235 (270)
191 d2giva1 d.108.1.1 (A:4-274) Pr 60.2 3 0.00022 32.4 3.2 49 25-88 186-234 (271)
192 d1rp3a2 a.4.13.2 (A:164-234) S 59.5 2.4 0.00018 25.3 2.1 23 50-75 36-58 (71)
193 d1sd4a_ a.4.5.39 (A:) Penicill 59.2 2 0.00014 29.1 1.8 50 38-88 8-58 (122)
194 d1jhga_ a.4.12.1 (A:) Trp repr 58.9 2.1 0.00015 28.3 1.8 44 31-79 40-83 (101)
195 d2p7vb1 a.4.13.2 (B:546-613) S 57.7 2.6 0.00019 25.7 2.0 24 50-76 24-47 (68)
196 d2bm8a1 c.66.1.50 (A:2-233) Ce 56.8 4.9 0.00036 30.3 4.0 33 180-212 80-116 (232)
197 d1ttya_ a.4.13.2 (A:) Sigma70 56.7 2.6 0.00019 27.0 2.0 23 50-75 37-59 (87)
198 d1ijwc_ a.4.1.2 (C:) HIN recom 55.8 2.2 0.00016 24.0 1.3 23 50-75 20-42 (47)
199 d1qpza1 a.35.1.5 (A:2-58) Puri 54.6 2.6 0.00019 24.7 1.6 21 53-76 2-22 (57)
200 d1ixsb1 a.4.5.11 (B:243-318) H 53.9 6.4 0.00047 24.4 3.4 37 49-88 20-57 (76)
201 d2icta1 a.35.1.3 (A:8-94) Anti 53.5 1.9 0.00014 27.3 0.9 28 43-75 8-35 (87)
202 d1vola2 a.74.1.2 (A:208-316) T 52.4 9.9 0.00072 24.7 4.6 41 28-79 46-86 (109)
203 d2dula1 c.66.1.58 (A:3-377) N( 52.2 7 0.00051 31.6 4.4 33 180-212 45-77 (375)
204 d2v9va2 a.4.5.35 (A:438-510) C 51.7 5.7 0.00042 24.0 3.0 44 50-104 25-70 (73)
205 d1fy7a_ d.108.1.1 (A:) Histone 51.2 3.2 0.00023 32.3 2.0 49 25-88 189-237 (273)
206 d1vola1 a.74.1.2 (A:113-207) T 50.3 8.9 0.00065 24.1 4.0 42 27-79 46-87 (95)
207 d1utxa_ a.35.1.3 (A:) Putative 50.1 3 0.00022 24.7 1.4 22 50-74 13-34 (66)
208 d1u5ta2 a.4.5.54 (A:165-232) V 49.9 7.4 0.00054 23.6 3.2 36 50-88 16-51 (68)
209 d1or7a1 a.4.13.2 (A:120-187) S 49.9 4.4 0.00032 24.0 2.1 23 50-75 33-55 (68)
210 d1v7ba1 a.4.1.9 (A:1-74) Trans 48.2 4.1 0.0003 24.5 1.8 26 44-72 16-42 (74)
211 d1b0na2 a.35.1.3 (A:1-68) SinR 47.8 3.8 0.00027 24.3 1.6 22 50-74 13-34 (68)
212 d2esha1 a.4.5.61 (A:4-117) Hyp 47.7 8.3 0.00061 25.4 3.6 67 41-113 15-87 (114)
213 d1vz0a1 a.4.14.1 (A:116-208) P 47.5 3.4 0.00025 26.6 1.4 26 51-79 19-44 (93)
214 d2iida1 c.3.1.2 (A:4-319,A:433 47.3 5.8 0.00042 29.5 3.0 33 178-212 27-61 (370)
215 d1t6sa1 a.4.5.60 (A:1-85) Segr 47.3 6.1 0.00044 24.7 2.6 29 49-80 20-50 (85)
216 d2croa_ a.35.1.2 (A:) cro 434 46.7 3.6 0.00026 24.2 1.3 22 50-74 15-36 (65)
217 d2ppxa1 a.35.1.3 (A:30-91) Unc 46.3 4.2 0.0003 23.9 1.6 22 50-74 11-32 (62)
218 d2okca1 c.66.1.45 (A:9-433) Ty 46.1 8.7 0.00063 31.2 4.1 34 167-202 151-184 (425)
219 d1y7ya1 a.35.1.3 (A:5-73) Rest 45.7 4.2 0.00031 24.2 1.6 22 50-74 21-42 (69)
220 d1r71a_ a.4.14.1 (A:) Transcri 45.4 3.2 0.00023 27.5 1.0 26 51-79 30-55 (114)
221 d1y9qa1 a.35.1.8 (A:4-82) Prob 45.3 4.5 0.00033 24.6 1.7 22 50-74 20-41 (79)
222 d2fnaa1 a.4.5.11 (A:284-356) H 45.0 9.3 0.00068 23.4 3.1 41 52-103 19-65 (73)
223 d1piwa2 c.2.1.1 (A:153-320) Ci 44.7 11 0.00081 26.0 4.1 34 178-212 25-59 (168)
224 d2gjca1 c.3.1.6 (A:16-326) Thi 44.3 9.8 0.00071 29.1 4.0 32 182-213 51-84 (311)
225 d1k78a1 a.4.1.5 (A:19-81) Pax- 43.8 5 0.00036 24.0 1.6 41 37-83 19-59 (63)
226 d1ku2a1 a.4.13.1 (A:273-332) S 43.6 3.9 0.00029 24.1 1.1 26 50-76 27-52 (60)
227 d2zgya2 c.55.1.1 (A:158-320) P 43.6 19 0.0014 24.1 5.3 58 155-213 91-150 (163)
228 d2cuja1 a.4.1.18 (A:8-108) Tra 43.4 8 0.00058 25.2 2.8 55 28-86 46-100 (101)
229 d2r1jl1 a.35.1.2 (L:3-68) P22 43.4 4.4 0.00032 23.8 1.3 23 50-75 15-37 (66)
230 d1r69a_ a.35.1.2 (A:) 434 C1 r 43.3 4.4 0.00032 23.5 1.3 22 50-74 13-34 (63)
231 d1ps9a3 c.4.1.1 (A:331-465,A:6 42.9 15 0.0011 26.2 4.5 34 179-212 41-74 (179)
232 d1aisb2 a.74.1.2 (B:1206-1300) 42.7 16 0.0012 22.8 4.4 41 28-79 45-85 (95)
233 d1s7oa_ a.4.13.3 (A:) Hypothet 42.7 5.9 0.00043 26.1 2.1 23 50-75 31-53 (106)
234 d1jt6a1 a.4.1.9 (A:2-72) Multi 42.7 4.6 0.00033 24.1 1.4 21 50-73 20-40 (71)
235 d1xmaa_ a.4.5.61 (A:) Predicte 42.6 2.1 0.00016 28.0 -0.3 63 41-112 12-83 (103)
236 d1e3ja2 c.2.1.1 (A:143-312) Ke 42.0 37 0.0027 22.9 6.7 34 178-212 24-58 (170)
237 d1y0pa3 d.168.1.1 (A:362-504) 41.8 4.8 0.00035 27.7 1.5 23 51-76 83-105 (143)
238 d2fx0a1 a.4.1.9 (A:4-76) Hemol 41.3 4.5 0.00033 24.4 1.2 21 50-73 23-43 (73)
239 d2fq4a1 a.4.1.9 (A:9-77) Trans 41.0 5.1 0.00037 23.8 1.4 27 44-73 16-43 (69)
240 d1pb6a1 a.4.1.9 (A:14-85) Hypo 40.9 5 0.00036 24.0 1.3 27 44-73 16-43 (72)
241 d2b5aa1 a.35.1.3 (A:1-77) Regu 40.7 5.5 0.0004 24.1 1.6 22 50-74 22-43 (77)
242 d2g7ga1 a.4.1.9 (A:9-73) Putat 40.3 3.4 0.00025 24.5 0.4 21 44-65 13-33 (65)
243 d1d4ca3 d.168.1.1 (A:360-505) 40.1 5.4 0.00039 27.5 1.6 23 51-76 84-106 (146)
244 d1e3ia2 c.2.1.1 (A:168-341) Al 39.7 20 0.0014 25.0 4.8 36 178-213 26-62 (174)
245 d2ofya1 a.35.1.3 (A:3-84) Puta 39.4 6.1 0.00045 24.6 1.6 21 51-74 25-45 (82)
246 d1y0ua_ a.4.5.5 (A:) Putative 39.1 38 0.0028 20.8 5.9 54 37-104 32-85 (89)
247 d1hlva1 a.4.1.7 (A:1-66) DNA-b 39.1 4.8 0.00035 24.3 1.0 35 37-76 12-47 (66)
248 d3c07a1 a.4.1.9 (A:15-89) Puta 38.8 6.8 0.00049 23.4 1.8 22 44-65 17-39 (75)
249 d1zkda1 c.66.1.52 (A:2-366) Hy 38.8 12 0.00089 29.6 3.8 23 180-202 79-101 (365)
250 d1p4wa_ a.4.6.2 (A:) Transcrip 38.6 4.6 0.00034 25.4 0.9 34 37-76 26-59 (87)
251 d2o38a1 a.35.1.13 (A:28-116) H 38.3 5.5 0.0004 25.1 1.3 29 41-74 16-44 (89)
252 d2fbqa1 a.4.1.9 (A:2-80) Trans 37.9 5.5 0.0004 24.2 1.2 21 50-73 23-43 (79)
253 d1djqa3 c.4.1.1 (A:341-489,A:6 37.0 15 0.0011 26.6 3.8 34 179-212 47-80 (233)
254 d2np5a1 a.4.1.9 (A:9-77) Trans 36.6 4.6 0.00033 23.9 0.6 23 43-65 12-35 (69)
255 d2gena1 a.4.1.9 (A:6-75) Proba 36.6 6.2 0.00045 23.3 1.2 20 50-72 19-38 (70)
256 d2g7la1 a.4.1.9 (A:16-83) Puta 36.3 3.6 0.00026 24.5 0.1 16 50-65 23-38 (68)
257 d2cqxa1 a.4.1.1 (A:8-66) LAG1 36.0 7.8 0.00057 22.5 1.6 23 51-76 29-51 (59)
258 d2i10a1 a.4.1.9 (A:10-78) Puta 35.8 6.8 0.0005 23.1 1.4 20 50-72 19-38 (69)
259 d1sgma1 a.4.1.9 (A:5-77) Putat 35.5 9.8 0.00072 22.5 2.1 16 50-65 21-36 (73)
260 d1t56a1 a.4.1.9 (A:22-94) Ethr 35.2 6.5 0.00048 23.3 1.2 22 44-65 15-37 (73)
261 d1ufma_ a.4.5.47 (A:) COP9 sig 35.1 8.1 0.00059 24.2 1.7 35 50-87 29-63 (84)
262 d2g7sa1 a.4.1.9 (A:3-76) Putat 34.9 5.1 0.00037 24.1 0.6 21 50-73 23-43 (74)
263 d2auwa1 a.35.1.10 (A:88-154) H 34.4 6.4 0.00046 23.7 1.0 22 50-74 13-34 (67)
264 d1xsva_ a.4.13.3 (A:) Hypothet 33.7 11 0.00077 24.8 2.2 23 50-75 33-55 (106)
265 d1rp0a1 c.3.1.6 (A:7-284) Thia 33.2 16 0.0012 27.1 3.6 30 183-212 35-65 (278)
266 d1ui5a1 a.4.1.9 (A:5-75) A-fac 33.0 8.1 0.00059 22.9 1.4 16 50-65 24-39 (71)
267 d1pdnc_ a.4.1.5 (C:) Paired pr 32.6 8.5 0.00062 25.8 1.6 45 37-87 21-65 (123)
268 d2gfna1 a.4.1.9 (A:4-80) Proba 32.5 5.6 0.00041 24.0 0.5 16 50-65 25-40 (77)
269 d2fd5a1 a.4.1.9 (A:1-76) Proba 32.0 7.6 0.00055 23.3 1.1 16 50-65 26-41 (76)
270 d1m6ex_ c.66.1.35 (X:) Salicyl 31.8 21 0.0015 28.5 4.1 36 179-214 50-101 (359)
271 d2ao9a1 a.4.1.17 (A:13-132) Ph 31.7 10 0.00074 25.1 1.7 22 50-74 35-56 (120)
272 d1zara1 a.4.5.56 (A:2-90) Rio2 31.1 19 0.0014 22.8 3.0 47 50-104 28-74 (89)
273 d1t1ea2 d.58.3.2 (A:12-190) Pr 30.9 17 0.0012 25.8 3.1 34 49-85 58-91 (179)
274 d2o7ta1 a.4.1.9 (A:1-78) Trans 30.6 8.6 0.00063 23.3 1.2 21 45-65 20-41 (78)
275 d2iu5a1 a.4.1.9 (A:1-71) Trans 30.5 7.8 0.00056 23.0 1.0 23 43-65 17-40 (71)
276 d2hkua1 a.4.1.9 (A:18-87) Puta 30.4 9.3 0.00068 22.6 1.3 20 51-73 20-39 (70)
277 d1aisb1 a.74.1.2 (B:1108-1205) 30.0 18 0.0013 22.6 2.9 42 28-80 47-88 (98)
278 d1eucb1 c.23.4.1 (B:246-393) S 29.8 13 0.00097 25.9 2.3 32 180-211 44-79 (148)
279 d1t6sa2 a.4.5.60 (A:86-162) Se 29.8 15 0.0011 22.6 2.3 40 42-88 15-54 (77)
280 d1p7ia_ a.4.1.1 (A:) Engrailed 29.7 8.4 0.00061 21.8 1.0 22 51-75 26-47 (53)
281 d2d6ya1 a.4.1.9 (A:7-74) Putat 29.6 9.1 0.00066 22.5 1.2 16 50-65 21-36 (68)
282 d1zk8a1 a.4.1.9 (A:6-77) Trans 28.5 4.2 0.0003 24.4 -0.7 16 50-65 22-37 (72)
283 d1le8a_ a.4.1.1 (A:) Mating ty 28.5 10 0.00076 21.3 1.2 24 50-76 23-46 (53)
284 d1x57a1 a.35.1.12 (A:8-85) End 28.4 11 0.00082 22.8 1.5 22 50-74 18-39 (78)
285 d2id3a1 a.4.1.9 (A:13-80) Puta 28.3 8.2 0.0006 22.7 0.8 21 50-73 25-45 (68)
286 d2gmga1 a.4.5.82 (A:1-105) Hyp 28.1 13 0.00097 24.3 1.9 26 38-65 13-38 (105)
287 d1s7ea1 a.4.1.1 (A:103-152) He 28.0 11 0.00079 20.9 1.2 23 50-75 24-46 (50)
288 d1rjda_ c.66.1.37 (A:) Leucine 27.9 12 0.00091 29.4 2.0 34 181-214 97-130 (328)
289 d1rr7a_ a.4.1.14 (A:) Middle o 27.8 14 0.001 23.5 2.0 39 34-79 53-91 (94)
290 d2craa1 a.4.1.1 (A:7-64) Homeo 27.4 11 0.00077 21.9 1.1 22 51-75 28-49 (58)
291 d1x2ma1 a.4.1.1 (A:8-59) Lag1 27.4 13 0.00091 21.0 1.4 24 50-76 20-43 (52)
292 d2np3a1 a.4.1.9 (A:35-99) Puta 27.3 6.2 0.00045 23.2 0.0 22 44-65 8-30 (65)
293 d1q06a_ a.6.1.3 (A:) Transcrip 27.2 30 0.0022 22.7 3.8 29 52-87 1-29 (127)
294 d1sqga2 c.66.1.38 (A:145-428) 27.2 24 0.0018 26.8 3.7 35 178-212 100-134 (284)
295 d9anta_ a.4.1.1 (A:) Antennape 27.1 9.9 0.00072 21.9 1.0 21 52-75 25-45 (56)
296 d1vi0a1 a.4.1.9 (A:6-77) Hypot 27.0 7.4 0.00054 23.0 0.4 16 50-65 20-35 (72)
297 d1rkta1 a.4.1.9 (A:2-82) Hypot 26.9 7.8 0.00057 23.6 0.5 16 50-65 30-45 (81)
298 d1jqba2 c.2.1.1 (A:1140-1313) 26.8 39 0.0029 23.3 4.6 35 178-212 25-60 (174)
299 d1sfea1 a.4.2.1 (A:93-176) Ada 26.5 16 0.0012 22.8 2.0 42 39-84 6-49 (84)
300 d2oi8a1 a.4.1.9 (A:8-86) Putat 26.4 8.7 0.00064 23.2 0.7 16 50-65 28-43 (79)
301 d1yb5a2 c.2.1.1 (A:121-294) Qu 25.8 38 0.0027 23.1 4.3 33 178-211 26-60 (174)
302 d1fnna1 a.4.5.11 (A:277-388) C 25.3 29 0.0021 22.5 3.3 34 54-87 41-74 (112)
303 d2es9a1 a.247.1.1 (A:11-107) H 25.2 11 0.00083 23.5 1.0 40 33-75 23-65 (97)
304 d2nu7b1 c.23.4.1 (B:239-388) S 25.1 29 0.0021 24.0 3.4 32 180-211 44-79 (150)
305 d2hyja1 a.4.1.9 (A:8-82) Putat 25.0 7.4 0.00054 23.4 0.1 22 44-65 17-39 (75)
306 d2ar0a1 c.66.1.45 (A:6-529) M. 24.8 31 0.0023 28.5 4.2 22 180-201 164-185 (524)
307 d1mgta1 a.4.2.1 (A:89-169) O6- 24.8 13 0.00095 23.1 1.3 24 49-75 19-42 (81)
308 d1vpta_ c.66.1.25 (A:) Polymer 24.4 21 0.0015 27.7 2.7 32 180-211 60-95 (297)
309 d1jgga_ a.4.1.1 (A:) Even-skip 24.2 12 0.00085 21.5 0.9 23 50-75 25-47 (57)
310 d1r8da_ a.6.1.3 (A:) Multidrug 23.7 36 0.0027 21.5 3.6 29 52-87 3-31 (109)
311 d1a9xa1 a.92.1.1 (A:403-555) C 23.5 16 0.0011 25.5 1.7 30 43-78 39-68 (153)
312 d1jvba2 c.2.1.1 (A:144-313) Al 23.5 38 0.0027 22.9 3.9 35 178-212 25-61 (170)
313 d2id6a1 a.4.1.9 (A:1-75) Trans 23.3 21 0.0016 21.0 2.1 21 50-73 22-42 (75)
314 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 22.7 14 0.001 21.1 1.1 22 51-75 27-48 (58)
315 d2e1oa1 a.4.1.1 (A:8-64) Homeo 22.7 14 0.0011 21.0 1.1 23 50-75 26-48 (57)
316 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 22.7 18 0.0013 22.2 1.7 23 51-76 48-70 (80)
317 d1yg2a_ a.4.5.61 (A:) Hypothet 22.5 18 0.0013 25.2 1.9 62 41-111 6-76 (178)
318 d1vj0a2 c.2.1.1 (A:156-337) Hy 22.1 50 0.0037 22.5 4.4 35 178-212 26-61 (182)
319 d2vkva1 a.4.1.9 (A:6-67) Tetra 21.5 18 0.0013 20.6 1.4 16 50-65 18-33 (62)
320 d1o1xa_ c.121.1.1 (A:) Putativ 21.4 19 0.0014 24.8 1.8 27 183-209 61-87 (145)
321 d1pdoa_ c.54.1.1 (A:) IIA doma 21.3 13 0.00095 24.8 0.8 34 180-213 60-95 (129)
322 d1e3oc1 a.4.1.1 (C:104-160) Oc 21.2 16 0.0012 20.8 1.1 24 50-76 24-47 (57)
323 d1dwka1 a.35.1.4 (A:1-86) Cyan 21.2 17 0.0012 22.9 1.3 22 50-74 25-46 (86)
324 d2fq3a1 a.4.1.18 (A:311-395) T 21.0 37 0.0027 21.0 3.0 54 30-86 29-83 (85)
325 d1zq3p1 a.4.1.1 (P:2-68) Homeo 20.8 15 0.0011 21.8 0.9 22 51-75 28-49 (67)
326 d1au7a1 a.4.1.1 (A:103-160) Pi 20.5 17 0.0013 20.8 1.1 24 50-76 25-48 (58)
327 d2vvpa1 c.121.1.1 (A:3-158) Al 20.5 25 0.0018 24.5 2.3 27 183-209 61-87 (156)
328 d1r8ea1 a.6.1.3 (A:3-120) Tran 20.3 45 0.0033 21.3 3.5 27 52-85 4-30 (118)
No 1
>d1fp2a1 a.4.5.29 (A:8-108) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.79 E-value=1.7e-20 Score=133.94 Aligned_cols=95 Identities=36% Similarity=0.585 Sum_probs=85.2
Q ss_pred chhhhhHHHHHHHHHHHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecC
Q 040620 10 AREHFQAQAQVWSYTYNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKD 89 (214)
Q Consensus 10 ~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~ 89 (214)
+.|..+++..+|++++||+.+++|++|+++||||+|+++++|+|++|||+++++++.+.+.|.|+||+|++.|+|.++.+
T Consensus 3 ~~e~~qaq~~l~~~~~gf~~s~aL~~aveLgi~d~l~~~~~p~t~~eLa~~~~~~~~~~~~L~RlLR~L~~~gi~~~~~~ 82 (101)
T d1fp2a1 3 PSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIITK 82 (101)
T ss_dssp STHHHHHHHHHHHHHTTHHHHHHHHHHHHTTHHHHHHHHTSCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTTSEEEEES
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHHHHcCCCCCHHHHHHHcCCCCccchHHHHHHHHHHhCCceeeecC
Confidence 56788999999999999999999999999999999987778999999999999987444679999999999999987653
Q ss_pred CCCCCccceeeCCCCCcccccccc
Q 040620 90 GKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 90 ~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
. +++|++|+. |+.|+
T Consensus 83 ~-----~~~Y~lt~~----s~~Lv 97 (101)
T d1fp2a1 83 E-----EESYALTVA----SELLV 97 (101)
T ss_dssp S-----SEEEEECHH----HHTTS
T ss_pred C-----CCeEecCHH----HHHhh
Confidence 1 579999999 99887
No 2
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.75 E-value=2.5e-18 Score=140.72 Aligned_cols=98 Identities=27% Similarity=0.398 Sum_probs=87.2
Q ss_pred cchHHHHHHhhccchhhhhHhHHHhhcCCCCChhhHHHH---------------HHHHHhhhhhhhhHHHHHhhcccccC
Q 040620 115 LQGSTILLLIADATFTTSFHFLSTWLQNDDQTLFGTADG---------------IFYEAMITDFELIASVLIEDCNEVSK 179 (214)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~lr~~~~~~f~~~~g---------------~f~~am~~~~~~~~~~~l~~~~~~~~ 179 (214)
.++++++.+..++.++..|.+|.+++|+|+ ++|+..+| .|+++|...+...+..+++.++| ++
T Consensus 3 ~s~~~~~~~~~~~~~~~~W~~L~~avrtG~-~~f~~~~G~~~~~~~~~~p~~~~~F~~aM~~~~~~~~~~~~~~~~~-~~ 80 (243)
T d1kyza2 3 VSISALNLMNQDKVLMESWYHLKDAVLDGG-IPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTG-FE 80 (243)
T ss_dssp CCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TS
T ss_pred CcHHHHHHHhcCHHHHHHHHHHHHHHhhCC-CHHHhhcCCCHHHHHHhCHHHHHHHHHHHhHhhhhHHHHHHHhccc-cc
Confidence 578899988888889999999999999997 57777665 79999999888888889999983 45
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecCCC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFACHL 214 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~ 214 (214)
+.++|||||||+|.++++++++||+++++++|+|+
T Consensus 81 ~~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dlp~ 115 (243)
T d1kyza2 81 GLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPH 115 (243)
T ss_dssp SCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECTT
T ss_pred CCcEEEEecCCCcHHHHHHHHHCCCCeEEEcccHH
Confidence 68899999999999999999999999999999995
No 3
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.74 E-value=1.4e-18 Score=142.46 Aligned_cols=99 Identities=20% Similarity=0.277 Sum_probs=83.2
Q ss_pred cchHHHHHHhhccchhhhhHhHHHhhcCCCCChhhHHHH---------------HHHHHhhhhhhhhHHHHHhhcccccC
Q 040620 115 LQGSTILLLIADATFTTSFHFLSTWLQNDDQTLFGTADG---------------IFYEAMITDFELIASVLIEDCNEVSK 179 (214)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~lr~~~~~~f~~~~g---------------~f~~am~~~~~~~~~~~l~~~~~~~~ 179 (214)
.++++++.++..+.++..|.+|.++++++++++|+.++| .|+++|.+.+...++.+++.|+ .|+
T Consensus 2 g~l~~~~~~~~~p~~~~~w~~l~~~v~~g~~~~f~~~~G~~~~e~l~~~p~~~~~F~~aM~~~s~~~~~~l~~~~~-~f~ 80 (244)
T d1fp1d2 2 GYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYT-GFE 80 (244)
T ss_dssp CCCTHHHHHHTCHHHHHHHTTHHHHHHSCC--------------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTT
T ss_pred ccHHHHHHHHhCHHHHHHHHHHHHHHhcCCCCHhHHhcCCCHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc
Confidence 467889999989999999999999999998888988776 7999999998888888999998 478
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecCCC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFACHL 214 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~ 214 (214)
+.++|||||||+|.++++++++||++++|++|+|+
T Consensus 81 ~~~~vlDiGGG~G~~~~~l~~~~P~l~~~v~Dlp~ 115 (244)
T d1fp1d2 81 GISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQ 115 (244)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHH
T ss_pred CCcEEEEecCCCcHHHHHHHHHCCCCeEEEecchh
Confidence 89999999999999999999999999999999984
No 4
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.67 E-value=5.3e-17 Score=132.95 Aligned_cols=98 Identities=40% Similarity=0.669 Sum_probs=84.9
Q ss_pred chHHHHHHhhccchhhhhHhHHHhhcCCCCChhhHHHH---------------HHHHHhhhhhhhhHHHHHhhcccccCC
Q 040620 116 QGSTILLLIADATFTTSFHFLSTWLQNDDQTLFGTADG---------------IFYEAMITDFELIASVLIEDCNEVSKG 180 (214)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~lr~~~~~~f~~~~g---------------~f~~am~~~~~~~~~~~l~~~~~~~~~ 180 (214)
++.+++.++.++.++.+|..+++++|++.+++|+.++| .|+++|...+......+.+ +.|.+++
T Consensus 2 s~ap~~~~~~~p~~~~~w~~l~~~~~~~~~~~f~~a~G~~~~e~l~~~pe~~~~F~~aM~~~s~~~~~~~~~-~~~~~~~ 80 (244)
T d1fp2a2 2 CLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRD-CDFVFDG 80 (244)
T ss_dssp CCHHHHHHHTCHHHHHGGGGHHHHHTCSSCCHHHHHHSSCHHHHHHHCHHHHHHHHHHHHHTHHHHHHHHHT-CHHHHTT
T ss_pred ChHHHHHHHhCHHHHHHHHHHHHHHhcCCCCHHHHhhCCCHHHHHHhCHHHHHHHHHHhhhhhhhhhhhHhh-hcccccC
Confidence 56788888889999999999999999998899988876 7999998887766555544 3344888
Q ss_pred CCcEEeecCCchHHHHHHHHHCCCCeEEEecCCC
Q 040620 181 LKPLVDVGGSTGTMARAIATAFPDTKCTVFACHL 214 (214)
Q Consensus 181 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~ 214 (214)
.++|||||||+|.++++++++||+++++|||+|+
T Consensus 81 ~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dlp~ 114 (244)
T d1fp2a2 81 LESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQ 114 (244)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHH
T ss_pred ceEEEEecCCccHHHHHHHHhCCCCeEEEecCHH
Confidence 9999999999999999999999999999999984
No 5
>d1tw3a1 a.4.5.29 (A:14-98) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=99.65 E-value=9.5e-17 Score=110.85 Aligned_cols=77 Identities=13% Similarity=0.140 Sum_probs=71.5
Q ss_pred HHHHHHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceee
Q 040620 21 WSYTYNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESIL 100 (214)
Q Consensus 21 ~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~ 100 (214)
+..+.+++.+.+|++|+++||||+|++ +|+|++|||+++|+++ +.+.|+||+|++.|+|.+++ ++.|.
T Consensus 6 l~~l~~~~~~~aL~~av~L~ifd~l~~--gp~s~~eLA~~~g~~~---~~l~rlLr~l~a~gl~~e~~-------~~~y~ 73 (85)
T d1tw3a1 6 LIRLGSLHTPMVVRTAATLRLVDHILA--GARTVKALAARTDTRP---EALLRLIRHLVAIGLLEEDA-------PGEFV 73 (85)
T ss_dssp HHHHHCSHHHHHHHHHHHTTHHHHHHT--TCCBHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEE-------TTEEE
T ss_pred HHHHHchHHHHHHHHHHHcCcHHHhcc--CCCCHHHHHHHhCcCh---hHHHHHHHHHHHCCCeEecC-------CCeEe
Confidence 444578999999999999999999986 8999999999999999 99999999999999999987 68999
Q ss_pred CCCCCcccccccc
Q 040620 101 LPPHLDFFSRISL 113 (214)
Q Consensus 101 ~t~~~~~~s~~l~ 113 (214)
+|+. |+.|.
T Consensus 74 lt~~----s~~L~ 82 (85)
T d1tw3a1 74 PTEV----GELLA 82 (85)
T ss_dssp ECTT----GGGGS
T ss_pred cCHH----HHHhh
Confidence 9999 98886
No 6
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=99.62 E-value=1.9e-16 Score=110.78 Aligned_cols=85 Identities=18% Similarity=0.157 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCC
Q 040620 15 QAQAQVWSYTYNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQ 94 (214)
Q Consensus 15 ~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 94 (214)
+....+++++.+++.+.+|++|+++||||+|++ +|+|++|||+++|+++ +.+.|+||+|++.|+|+++++.
T Consensus 6 ~~~d~ll~~~~~~~~~~~L~~aveL~ifd~L~~--gp~t~~eLA~~~g~~~---~~l~rLlr~L~a~gll~~~~d~---- 76 (92)
T d1qzza1 6 QDLDVLLKNLGNLVTPMALRVAATLRLVDHLLA--GADTLAGLADRTDTHP---QALSRLVRHLTVVGVLEGGEKQ---- 76 (92)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCH---HHHHHHHHHHHHTTSEECCCC-----
T ss_pred hhHHHHHHHHHchHHHHHHHHHHHcCchHHHhC--CCCCHHHHHHHHCcCc---hHHHHHHHHHHHCCCeeeecCC----
Confidence 667889999999999999999999999999987 8999999999999999 9999999999999999988621
Q ss_pred ccceeeCCCCCcccccccc
Q 040620 95 EEESILLPPHLDFFSRISL 113 (214)
Q Consensus 95 ~~~~y~~t~~~~~~s~~l~ 113 (214)
.+.|++|+. +..|.
T Consensus 77 -~~~~~~t~~----g~lL~ 90 (92)
T d1qzza1 77 -GRPLRPTRL----GMLLA 90 (92)
T ss_dssp -CCCCEECTT----GGGGS
T ss_pred -CceecccHH----HHhcc
Confidence 457888999 88775
No 7
>d1fp1d1 a.4.5.29 (D:19-128) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.59 E-value=9.2e-16 Score=110.05 Aligned_cols=98 Identities=19% Similarity=0.192 Sum_probs=80.6
Q ss_pred hhhhHHHHHHHHHHHHhHHHHHHHHHhcCcchhhhcCCCC---CCHHHHHHHcCC---CCCCcccHHHHHHHHHhCCcee
Q 040620 12 EHFQAQAQVWSYTYNYMKSLSLKRAIQLRIPDIINNSGQP---MTLTQIIVALNV---HPNKTRCTQILVCLLAHSGFFV 85 (214)
Q Consensus 12 ~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p---~t~~eLA~~~g~---~~~~~~~l~rlLr~L~~~g~l~ 85 (214)
+.+++....++++.+++.+++|++|++|||+|+|+.+|+| +|+.|||.++.+ +|..+..|.|+||.|++.|+|.
T Consensus 2 ~~~~~~l~a~~L~~~~v~pMaLk~AieLgI~diI~~~G~~~~~ls~~ela~~lp~~~~~p~~~~~L~RiLRlLas~~vf~ 81 (110)
T d1fp1d1 2 TEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLT 81 (110)
T ss_dssp CHHHHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHHHHHHHHHHHHTTSEE
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHcCCHHHHHHcCCCCCCCCHHHHHHhCCCCCCCccHHHHHHHHHHHHHHcCccc
Confidence 5678899999999999999999999999999999987544 899999999886 3422246999999999999998
Q ss_pred eecCC-CCCCccceeeCCCCCcccccccc
Q 040620 86 QQKDG-KNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 86 ~~~~~-~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
+...+ .+++.+..|.+||. |++|+
T Consensus 82 ~~~~~~~~g~~e~~Y~Ltpv----sk~Lv 106 (110)
T d1fp1d1 82 STTRTIEDGGAERVYGLSMV----GKYLV 106 (110)
T ss_dssp EEEEECTTSCEEEEEEECTT----GGGGS
T ss_pred cccccCCCCCeeeEEecchh----hHhhc
Confidence 66432 22222457999999 99998
No 8
>d1kyza1 a.4.5.29 (A:13-119) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.54 E-value=1.6e-15 Score=108.38 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=80.3
Q ss_pred hhhhHHHHHHHHHHHHhHHHHHHHHHhcCcchhhhcCC--CCCCHHHHHHHcCC-CCCCcccHHHHHHHHHhCCceeeec
Q 040620 12 EHFQAQAQVWSYTYNYMKSLSLKRAIQLRIPDIINNSG--QPMTLTQIIVALNV-HPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 12 ~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~--~p~t~~eLA~~~g~-~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+.+++....++++.+++.+++|++|++|||+|+|+..| .++|..|||.++.. +|+++..|+|+||.|++.|+|.+..
T Consensus 3 ~dee~~l~a~~L~~~~v~pmaLk~AieLgI~DiI~~~G~~~~ls~~eia~~l~~~~p~~~~~L~RilR~Las~~vf~~~~ 82 (107)
T d1kyza1 3 SDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSV 82 (107)
T ss_dssp CHHHHHHHHHHHHTTTHHHHHHHHHHHTTHHHHHHTTCTTCCBCHHHHHHTSSCCCTTHHHHHHHHHHHHHHTTSEEEEE
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHcCCHHHHHHcCCCCCCCHHHHHHhcCCCCCcchHHHHHHHHHHHhcCceEEee
Confidence 34667788889999999999999999999999999874 47899999999988 4433357999999999999998754
Q ss_pred CC-CCCCccceeeCCCCCcccccccc
Q 040620 89 DG-KNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 89 ~~-~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
.. .+|+.+.+|.+||. |++|+
T Consensus 83 ~~~~dg~~~~~Y~LTpv----sk~Lv 104 (107)
T d1kyza1 83 RTQQDGKVQRLYGLATV----AKYLV 104 (107)
T ss_dssp EECTTSCEEEEEEECHH----HHHHS
T ss_pred ecCCCCCeeeEEecchh----HHhhc
Confidence 32 22222457999999 99987
No 9
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=99.53 E-value=3.2e-15 Score=122.80 Aligned_cols=98 Identities=21% Similarity=0.217 Sum_probs=80.0
Q ss_pred ccchHHHHHHhhccc-hhhhhHhHHHhhcCCCCChhhHHHH---------------HHHHHhhhhhhhhHHHHHhhcccc
Q 040620 114 QLQGSTILLLIADAT-FTTSFHFLSTWLQNDDQTLFGTADG---------------IFYEAMITDFELIASVLIEDCNEV 177 (214)
Q Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~l~~~lr~~~~~~f~~~~g---------------~f~~am~~~~~~~~~~~l~~~~~~ 177 (214)
|.++++++.+..... ...+|.+|.+.+|+|.+ .|...+| .|+++|...+...++.+++.+|
T Consensus 2 p~~~~~~~~l~~~~~~~~~~~~~L~~~~rtG~~-~~~~~~G~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~d-- 78 (256)
T d1qzza2 2 PAQQRAWLDLNGAVSHADLAFTGLLDVVRTGRP-AYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-- 78 (256)
T ss_dssp TTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSCC-SHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGSTTTTHHHHHTSC--
T ss_pred cHHHHHHHhhcCchhhhHhhHHHHHHHHHhCCc-hhhhhhCCCHHHHHHhCHHHHHHHHHHHHhhHHHHHHHHHhcCC--
Confidence 345677765543322 23579999999999974 4555444 7899999888888888999999
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecCCC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFACHL 214 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~ 214 (214)
|++.++|||||||+|.++..++++||+++++++|+|+
T Consensus 79 ~~~~~~vlDvG~G~G~~~~~l~~~~P~~~~~~~Dlp~ 115 (256)
T d1qzza2 79 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAG 115 (256)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHH
T ss_pred CccCCEEEEECCCCCHHHHHHHHhhcCcEEEEecChH
Confidence 8899999999999999999999999999999999973
No 10
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=99.46 E-value=5.5e-14 Score=114.77 Aligned_cols=83 Identities=22% Similarity=0.291 Sum_probs=73.0
Q ss_pred hhhhhHhHHHhhcCCCCChhhHHHH---------------HHHHHhhhhhhhhHHHHHhhcccccCCCCcEEeecCCchH
Q 040620 129 FTTSFHFLSTWLQNDDQTLFGTADG---------------IFYEAMITDFELIASVLIEDCNEVSKGLKPLVDVGGSTGT 193 (214)
Q Consensus 129 ~~~~~~~l~~~lr~~~~~~f~~~~g---------------~f~~am~~~~~~~~~~~l~~~~~~~~~~~~vvDVGGG~G~ 193 (214)
...+|.+|++.+|+|+ .+|..++| .|.++|...+...++.+++.+| |++.++|||||||+|.
T Consensus 17 ~~~~~~~L~~~vr~G~-~~~~~~~G~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~d--~~~~~~VLDvGcG~G~ 93 (253)
T d1tw3a2 17 ADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD--WTNVRHVLDVGGGKGG 93 (253)
T ss_dssp HGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHHHHSC--CTTCSEEEEETCTTSH
T ss_pred ccccHHHHHHHHHhCC-chhhhccCCCHHHHHhhCHHHHHHHHHHHHHhHHHHHHHHHhhcC--CccCCEEEEeCCCCCH
Confidence 3467999999999997 45665554 6899999888888888999999 8899999999999999
Q ss_pred HHHHHHHHCCCCeEEEecCCC
Q 040620 194 MARAIATAFPDTKCTVFACHL 214 (214)
Q Consensus 194 ~~~~l~~~~P~l~~~v~Dlp~ 214 (214)
++..+++++|+++++++|+|+
T Consensus 94 ~~~~la~~~p~~~~~~~D~~~ 114 (253)
T d1tw3a2 94 FAAAIARRAPHVSATVLEMAG 114 (253)
T ss_dssp HHHHHHHHCTTCEEEEEECTT
T ss_pred HHHHHHHhcceeEEEEccCHH
Confidence 999999999999999999984
No 11
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.19 E-value=3.3e-07 Score=60.45 Aligned_cols=56 Identities=16% Similarity=0.282 Sum_probs=50.5
Q ss_pred cCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 39 LRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 39 lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
+.|.+.+..++.|+|+.|||+++|+++ ..++|+|..|...|++.+++ +++|.+++.
T Consensus 8 l~IL~~~a~~~~~~s~~eia~~~~~~~---st~~rll~tL~~~g~l~~~~-------~g~y~lG~~ 63 (75)
T d1mkma1 8 FEILDFIVKNPGDVSVSEIAEKFNMSV---SNAYKYMVVLEEKGFVLRKK-------DKRYVPGYK 63 (75)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEECT-------TSCEEECTH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCH---HHHHHHHHHHHHCCCEEECC-------CCCEeecHH
Confidence 457788887768999999999999999 99999999999999999986 688999887
No 12
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}
Probab=97.69 E-value=2.9e-05 Score=62.58 Aligned_cols=54 Identities=22% Similarity=0.188 Sum_probs=40.4
Q ss_pred HHHhhhhhhhhHHHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 156 YEAMITDFELIASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 156 ~~am~~~~~~~~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..++.......+..+....+ +++..+|||||||+|.++..|++++ +.+++++|+
T Consensus 45 ~~a~~~~~~~~~~~l~~~~~--l~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~ 98 (282)
T d2o57a1 45 REASLRTDEWLASELAMTGV--LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNI 98 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCCCCEEEEeCCCCcHHHhhhhccC-CcEEEEEec
Confidence 34444444444455555555 7778999999999999999999875 678999986
No 13
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
Probab=97.52 E-value=6.2e-05 Score=59.25 Aligned_cols=42 Identities=19% Similarity=0.120 Sum_probs=34.8
Q ss_pred HHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 168 SVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 168 ~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+.+.+. +.+..+|||||||+|.++..++++++ .+++.+|+
T Consensus 23 ~~l~~~~~--l~pg~~VLDiGCG~G~~~~~la~~~~-~~v~GvD~ 64 (245)
T d1nkva_ 23 ATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDM 64 (245)
T ss_dssp HHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEES
T ss_pred HHHHHHcC--CCCCCEEEEEcCCCCHHHHHHHHhcC-CEEEEEec
Confidence 34556555 66788999999999999999998876 78999987
No 14
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}
Probab=97.48 E-value=4.8e-05 Score=59.06 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=29.8
Q ss_pred CCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 181 LKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 181 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...+||||||.|.++..+++.+|+..++++|+
T Consensus 30 ~PlvLeIGcG~G~~~~~lA~~~p~~~~iGiD~ 61 (204)
T d2fcaa1 30 NPIHIEVGTGKGQFISGMAKQNPDINYIGIEL 61 (204)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECS
T ss_pred CceEEEEEecCcHHHHHHHHhCCCCcEEEeec
Confidence 34789999999999999999999999999996
No 15
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.46 E-value=5.1e-05 Score=58.88 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=29.9
Q ss_pred CCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 181 LKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 181 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...+||||||.|.++..+++.+|+..++++|+
T Consensus 32 ~plvLdIGcG~G~~~~~lA~~~p~~~~iGid~ 63 (204)
T d1yzha1 32 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDI 63 (204)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEES
T ss_pred CCeEEEEeccCCHHHHHHHHHCCCCceEEEec
Confidence 45799999999999999999999999999986
No 16
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}
Probab=97.46 E-value=4.6e-05 Score=59.26 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=30.5
Q ss_pred CCCCcEEeecCCchHHHHHHHHH--CCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATA--FPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~--~P~l~~~v~Dl 212 (214)
.+..+|||||||+|..+..|++. +|+.+++++|+
T Consensus 38 ~~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~ 73 (225)
T d1im8a_ 38 TADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDN 73 (225)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECS
T ss_pred CCCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCC
Confidence 45679999999999999999986 58999999997
No 17
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=97.28 E-value=0.00013 Score=58.54 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=31.5
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.+..+|||||||+|.++..+++.+|+.+++.+|+
T Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~~giD~ 116 (268)
T d1p91a_ 83 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDV 116 (268)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEES
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCEEEEecc
Confidence 3567999999999999999999999999999996
No 18
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.15 E-value=0.00016 Score=57.04 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=32.7
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+..+|||||||+|..+..+++..|+-+++.+|+
T Consensus 72 ikpG~~VLDlGcGsG~~~~~la~~~~~g~V~aVDi 106 (230)
T d1g8sa_ 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEY 106 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEES
T ss_pred CCCCCEEEEeCEEcCHHHHHHHHhCCCCEEEEEeC
Confidence 66788999999999999999999999999999986
No 19
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.12 E-value=0.00023 Score=60.68 Aligned_cols=45 Identities=16% Similarity=0.124 Sum_probs=37.2
Q ss_pred HHHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecCC
Q 040620 167 ASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 167 ~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
+..+++..+ .....+|||||||.|..+..+++.+|..+++++|+-
T Consensus 205 i~~Il~~l~--Lkpgd~fLDLGCG~G~~vl~aA~~~g~~~v~GIDiS 249 (406)
T d1u2za_ 205 LSDVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIM 249 (406)
T ss_dssp HHHHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECC
T ss_pred HHHHHHHhC--CCCCCEEEeCCCCCcHHHHHHHHHcCCCeEEEEeCC
Confidence 344555554 666789999999999999999999998899999863
No 20
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=97.10 E-value=0.00039 Score=56.21 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=31.0
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
....+|+|+|||+|..++.+++.+|+++++..|.
T Consensus 107 ~~~~~vlDlGtGSG~I~i~la~~~p~~~v~avDi 140 (274)
T d2b3ta1 107 EQPCRILDLGTGTGAIALALASERPDCEIIAVDR 140 (274)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECS
T ss_pred ccccceeeeehhhhHHHHHHHhhCCcceeeeccc
Confidence 3456899999999999999999999999999986
No 21
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}
Probab=97.09 E-value=0.00014 Score=58.60 Aligned_cols=44 Identities=20% Similarity=0.250 Sum_probs=36.0
Q ss_pred HHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCC-CeEEEecC
Q 040620 168 SVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPD-TKCTVFAC 212 (214)
Q Consensus 168 ~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~v~Dl 212 (214)
+.+++.. |...+..+|||||||+|.++..+++.+|. .+++++|+
T Consensus 16 ~~l~~~~-~~~~~~~~ILDiGcG~G~~~~~la~~~~~~~~v~giD~ 60 (281)
T d2gh1a1 16 SFLVNTV-WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDS 60 (281)
T ss_dssp HHHHHTT-SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEEC
T ss_pred HHHHHHH-hccCCcCEEEEecCcCCHHHHHHHHhCCCCCEEEEEec
Confidence 4455544 34677889999999999999999999985 78999996
No 22
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.05 E-value=0.00037 Score=56.72 Aligned_cols=43 Identities=14% Similarity=0.221 Sum_probs=35.9
Q ss_pred HHHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 167 ASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 167 ~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...+++... ..+..+|||||||.|.+++.++++++ .+++++++
T Consensus 50 ~~~~~~~l~--l~~G~~VLDiGCG~G~~~~~~a~~~g-~~v~git~ 92 (291)
T d1kpia_ 50 RKLALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTL 92 (291)
T ss_dssp HHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEES
T ss_pred HHHHHHhcC--CCCCCEEEEecCcchHHHHHHHHhcC-cceeeccc
Confidence 345666666 77889999999999999999999997 58888876
No 23
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.04 E-value=0.00036 Score=54.44 Aligned_cols=41 Identities=10% Similarity=0.141 Sum_probs=32.3
Q ss_pred HHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 168 SVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 168 ~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+++.+. ..+.++|||||||+|..+..++++. .+++++|+
T Consensus 31 ~~~~~~~~--~~~~~~iLDiGcGtG~~~~~l~~~~--~~v~gvD~ 71 (251)
T d1wzna1 31 EEIFKEDA--KREVRRVLDLACGTGIPTLELAERG--YEVVGLDL 71 (251)
T ss_dssp HHHHHHTC--SSCCCEEEEETCTTCHHHHHHHHTT--CEEEEEES
T ss_pred HHHHHHhc--CCCCCEEEEeCCCCCccchhhcccc--eEEEEEee
Confidence 34455554 5567899999999999999999974 47888886
No 24
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.03 E-value=0.00044 Score=53.50 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=32.8
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+..+|||||||+|..+..+++..|+.+++.+|.
T Consensus 54 lkpg~~VLDlGcG~G~~~~~la~~v~~g~V~gvDi 88 (209)
T d1nt2a_ 54 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEY 88 (209)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECC
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHhccCCeEEEEeC
Confidence 66788999999999999999999999999999996
No 25
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.02 E-value=0.0003 Score=53.44 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=30.7
Q ss_pred HHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 170 LIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 170 ~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+++.++ ..+..+|||||||+|.+++.+++..|+ ++++|+
T Consensus 44 Li~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~--v~~iD~ 82 (194)
T d1dusa_ 44 LVENVV--VDKDDDILDLGCGYGVIGIALADEVKS--TTMADI 82 (194)
T ss_dssp HHHHCC--CCTTCEEEEETCTTSHHHHHHGGGSSE--EEEEES
T ss_pred HHHhCC--cCCCCeEEEEeecCChhHHHHHhhccc--cceeee
Confidence 455555 456789999999999999999999885 555564
No 26
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.02 E-value=0.0004 Score=56.13 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=35.9
Q ss_pred HHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecCC
Q 040620 168 SVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 168 ~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
..+++... ..+..+|||||||.|.++..++++++ .+++++|+-
T Consensus 42 ~~~~~~l~--l~~g~~VLDiGCG~G~~a~~~a~~~g-~~v~gi~ls 84 (280)
T d2fk8a1 42 DLNLDKLD--LKPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLS 84 (280)
T ss_dssp HHHHTTSC--CCTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESC
T ss_pred HHHHHHcC--CCCCCEEEEecCCchHHHHHHHHhCc-eeEEEecch
Confidence 45667766 77789999999999999999988875 599998863
No 27
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.95 E-value=0.00049 Score=55.85 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=35.2
Q ss_pred HHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 168 SVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 168 ~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+++... ..+..+|||||||.|..++.++++++ .+++++++
T Consensus 52 ~~~~~~l~--l~~G~~VLDiGCG~G~~a~~~a~~~g-~~v~git~ 93 (285)
T d1kpga_ 52 DLALGKLG--LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTL 93 (285)
T ss_dssp HHHHTTTT--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEES
T ss_pred HHHHHHcC--CCCCCEEEEecCcchHHHHHHHhcCC-cceEEEec
Confidence 44566665 67789999999999999999999995 89888875
No 28
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.95 E-value=0.00055 Score=56.47 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=37.1
Q ss_pred HHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 168 SVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 168 ~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+++... ..+..+|+|||||.|.++..+++.+|..+++++|+
T Consensus 141 ~~~~~~~~--l~~~~~vlD~GcG~G~~~~~~a~~~~~~~~~Gid~ 183 (328)
T d1nw3a_ 141 AQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEK 183 (328)
T ss_dssp HHHHHHSC--CCTTCEEEEETCTTSHHHHHHHHHCCCSEEEEEEC
T ss_pred HHHHHHcC--CCCCCEEEEcCCCCCHHHHHHHHHhCCCeEEEEeC
Confidence 44566665 66778999999999999999999999999999986
No 29
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=96.92 E-value=0.00036 Score=52.67 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=30.8
Q ss_pred HHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 170 LIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 170 ~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
++.... ..+..+|||||||+|.+++.+++..+ +++.+|+
T Consensus 25 il~~l~--~~~g~~VLDiGcGsG~~s~~lA~~~~--~V~avD~ 63 (186)
T d1l3ia_ 25 IMCLAE--PGKNDVAVDVGCGTGGVTLELAGRVR--RVYAIDR 63 (186)
T ss_dssp HHHHHC--CCTTCEEEEESCTTSHHHHHHHTTSS--EEEEEES
T ss_pred HHHhcC--CCCCCEEEEEECCeEcccccccccce--EEEEecC
Confidence 344444 55678999999999999999988754 7888886
No 30
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.85 E-value=0.00064 Score=51.74 Aligned_cols=31 Identities=6% Similarity=0.034 Sum_probs=27.0
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...+|||||||+|.++..+++. +.+++++|+
T Consensus 37 ~~~~ILDiGcG~G~~~~~la~~--~~~v~giD~ 67 (226)
T d1ve3a1 37 KRGKVLDLACGVGGFSFLLEDY--GFEVVGVDI 67 (226)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEES
T ss_pred CCCEEEEECCCcchhhhhHhhh--hcccccccc
Confidence 4579999999999999999985 668899886
No 31
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=96.84 E-value=0.00027 Score=45.22 Aligned_cols=47 Identities=11% Similarity=0.190 Sum_probs=41.7
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+..|+.+|..+ +|+|..|||+.+|+++ ..+.++++.|...|++.+.+
T Consensus 8 ~~~Il~~l~~~-g~~sr~eLa~~~glS~---~Tv~~~l~~L~~~Glv~e~~ 54 (71)
T d1z05a1 8 AGRVYKLIDQK-GPISRIDLSKESELAP---ASITKITRELIDAHLIHETT 54 (71)
T ss_dssp HHHHHHHHHHH-CSBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCCCH---HHHHHHHHHHHHCCCEEEec
Confidence 34577788876 8999999999999999 99999999999999998764
No 32
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.84 E-value=0.00043 Score=43.36 Aligned_cols=55 Identities=16% Similarity=0.125 Sum_probs=44.7
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCC
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLP 102 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t 102 (214)
++.|..+|.++ +.+|.+|||+++|++. +.+++-+..|...|+..+... ..-|+++
T Consensus 7 ~~~iL~~L~~~-~~~s~~eLa~~l~vS~---~ti~r~i~~L~~~G~~I~~~~------g~GY~L~ 61 (63)
T d1biaa1 7 PLKLIALLANG-EFHSGEQLGETLGMSR---AAINKHIQTLRDWGVDVFTVP------GKGYSLP 61 (63)
T ss_dssp HHHHHHHHTTS-SCBCHHHHHHHHTSCH---HHHHHHHHHHHHTTCCCEEET------TTEEECS
T ss_pred HHHHHHHHHHC-CcCCHHHHHHHHCcCH---HHHHHHHHHHHHCCCcEEEeC------CCeEEeC
Confidence 35577888775 8899999999999999 999999999999998665542 3457765
No 33
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}
Probab=96.83 E-value=0.00031 Score=54.94 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=27.4
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...++|||||||+|.++..++++.+ +++++|+
T Consensus 36 ~~~~~vLDiGCG~G~~~~~l~~~g~--~v~GvD~ 67 (246)
T d1y8ca_ 36 LVFDDYLDLACGTGNLTENLCPKFK--NTWAVDL 67 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS--EEEEECS
T ss_pred CCCCeEEEEeCcCCHHHHHHHHhCC--ccEeecc
Confidence 3457999999999999999999865 6888886
No 34
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.78 E-value=0.00047 Score=43.37 Aligned_cols=55 Identities=18% Similarity=0.242 Sum_probs=44.4
Q ss_pred cCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCC
Q 040620 39 LRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPP 103 (214)
Q Consensus 39 lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~ 103 (214)
..|..+|.++.+++|.++||+.+++++ +.++|-+..|...|+-.... .+-|.+.+
T Consensus 10 ~~Il~~L~~~~~~vs~~~La~~l~VS~---~TI~rdi~~L~~~G~~I~~~-------~gGY~L~~ 64 (65)
T d1j5ya1 10 KSIVRILERSKEPVSGAQLAEELSVSR---QVIVQDIAYLRSLGYNIVAT-------PRGYVLAG 64 (65)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHHTSCH---HHHHHHHHHHHHHTCCCEEE-------TTEEECCT
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHCCCH---HHHHHHHHHHHHCCCeEEEe-------CCCEEeCC
Confidence 456777766547899999999999999 99999999999999854444 36787764
No 35
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=96.78 E-value=0.00067 Score=51.35 Aligned_cols=33 Identities=15% Similarity=0.092 Sum_probs=27.5
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+....+|||||||+|..+..++++. .+++.+|+
T Consensus 28 ~~~~grvLDiGcG~G~~~~~la~~g--~~v~gvD~ 60 (198)
T d2i6ga1 28 VVAPGRTLDLGCGNGRNSLYLAANG--YDVTAWDK 60 (198)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHTT--CEEEEEES
T ss_pred cCCCCcEEEECCCCCHHHHHHHHHh--hhhccccC
Confidence 3345799999999999999999985 56788876
No 36
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}
Probab=96.70 E-value=0.00094 Score=53.20 Aligned_cols=53 Identities=17% Similarity=0.125 Sum_probs=35.5
Q ss_pred HHHHHhhhhhhhhHHHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 154 IFYEAMITDFELIASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 154 ~f~~am~~~~~~~~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.|..+-...+++..+.+.+ +. .+.++|||||||+|.+++.+++. ..+++.+|+
T Consensus 98 aFGTG~H~TT~l~l~~l~~-~~---~~g~~VLDiGcGsG~l~i~aa~~--g~~V~gvDi 150 (254)
T d2nxca1 98 AFGTGHHETTRLALKALAR-HL---RPGDKVLDLGTGSGVLAIAAEKL--GGKALGVDI 150 (254)
T ss_dssp ----CCSHHHHHHHHHHHH-HC---CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEES
T ss_pred ccCccccchhhHHHHHHHh-hc---CccCEEEEcccchhHHHHHHHhc--CCEEEEEEC
Confidence 3545555556665554433 22 35689999999999999988875 467888886
No 37
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.70 E-value=0.00042 Score=53.99 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=27.2
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...+|||||||.|..+..++++.| .+++++|+
T Consensus 53 ~g~~VLdIGcG~G~~a~~~a~~~~-~~v~~id~ 84 (229)
T d1zx0a1 53 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIEC 84 (229)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE-EEEEEEEC
T ss_pred CCCeEEEeeccchHHHHHHHHcCC-CeEEEeCC
Confidence 457999999999999999998766 47888886
No 38
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}
Probab=96.67 E-value=0.00054 Score=52.87 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=27.7
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
++..+|||||||+|.++..+++. ..+++++|.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~ 72 (246)
T d2avna1 41 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDP 72 (246)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEES
T ss_pred CCCCEEEEECCCCchhccccccc--ceEEEEeec
Confidence 45679999999999999999876 678999886
No 39
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}
Probab=96.61 E-value=0.00084 Score=53.21 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=32.9
Q ss_pred HHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 168 SVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 168 ~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+++.++ ..+..++||||||+|.++..|++.+++ +++++|.
T Consensus 83 ~~fl~~l~--~~~~~~vLD~GcG~G~~t~~ll~~~~~-~v~~vD~ 124 (254)
T d1xtpa_ 83 RNFIASLP--GHGTSRALDCGAGIGRITKNLLTKLYA-TTDLLEP 124 (254)
T ss_dssp HHHHHTST--TCCCSEEEEETCTTTHHHHHTHHHHCS-EEEEEES
T ss_pred HHHHhhCC--CCCCCeEEEecccCChhhHHHHhhcCc-eEEEEcC
Confidence 34556665 556789999999999999999988776 6777774
No 40
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.60 E-value=0.00072 Score=53.69 Aligned_cols=34 Identities=9% Similarity=0.118 Sum_probs=31.4
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
....+++|||+|+|..+..|++++|+++++..|+
T Consensus 60 ~~~~~~LDiGtGsg~I~~~l~~~~~~~~~~~~Di 93 (250)
T d2h00a1 60 STLRRGIDIGTGASCIYPLLGATLNGWYFLATEV 93 (250)
T ss_dssp CCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEES
T ss_pred cccceEEEeCCCchHHHHHHHHhCCCccccceec
Confidence 4467999999999999999999999999999986
No 41
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=96.55 E-value=0.0007 Score=42.19 Aligned_cols=45 Identities=20% Similarity=0.335 Sum_probs=41.0
Q ss_pred CcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecC
Q 040620 40 RIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKD 89 (214)
Q Consensus 40 glfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~ 89 (214)
.|+..|.. +|+|..|||+.+|+++ ..+.++++-|...|++.+.+.
T Consensus 3 ~Il~~i~~--~pisr~eLa~~~gls~---~TVs~~v~~L~~~GlV~e~~~ 47 (62)
T d2hoea1 3 RILKRIMK--SPVSRVELAEELGLTK---TTVGEIAKIFLEKGIVVEEKD 47 (62)
T ss_dssp CSHHHHHH--SCBCHHHHHHHHTCCH---HHHHHHHHHHHHHTSEEEEEC
T ss_pred HHHHHHHH--CCcCHHHHHHHHCcCH---HHHHHHHHHHHHCCCEEECCC
Confidence 57788876 7999999999999999 999999999999999998764
No 42
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=96.52 E-value=0.0015 Score=51.90 Aligned_cols=57 Identities=25% Similarity=0.300 Sum_probs=35.3
Q ss_pred HHHHhhhhhhhh----HHHHHhhcccccCCCCcEEeecCCchHHHHHHHHH-CCCCeEEEecCC
Q 040620 155 FYEAMITDFELI----ASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATA-FPDTKCTVFACH 213 (214)
Q Consensus 155 f~~am~~~~~~~----~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~v~Dlp 213 (214)
|...|...++.. +..++...+ .....+|||+|||+|.++..+++. .|+-+++.+|.-
T Consensus 58 ~~~~~~r~~qiiypkD~~~Ii~~l~--i~pG~rVLEiG~GsG~lt~~la~~v~~~g~V~~vD~~ 119 (250)
T d1yb2a1 58 FGRVIRRNTQIISEIDASYIIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERD 119 (250)
T ss_dssp HHHHC------------------CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSC
T ss_pred HHhhCCCCCcccCHHHHHHHHHHcC--CCCcCEEEEeeeeCcHHHHHHHHHhCCCcEEEEEECC
Confidence 445565444332 233444444 666789999999999999999987 688899998863
No 43
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.51 E-value=0.00093 Score=53.68 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=28.4
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.+.++|||||||+|.++..|+++ +.+++.+|+
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~--g~~v~gvD~ 86 (292)
T d1xvaa_ 55 HGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDA 86 (292)
T ss_dssp TTCCEEEESSCTTSHHHHHHHHT--TCEEEEEES
T ss_pred cCCCEEEEecCCCcHHHHHHHHc--CCeeeeccC
Confidence 34679999999999999999987 678999996
No 44
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.51 E-value=0.00057 Score=52.69 Aligned_cols=34 Identities=12% Similarity=0.260 Sum_probs=28.5
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+..+|||||||+|.++..++++.+. +++++|+
T Consensus 58 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~ 91 (222)
T d2ex4a1 58 KTGTSCALDCGAGIGRITKRLLLPLFR-EVDMVDI 91 (222)
T ss_dssp CCCCSEEEEETCTTTHHHHHTTTTTCS-EEEEEES
T ss_pred CCCCCEEEEeccCCCHhhHHHHHhcCC-EEEEeec
Confidence 345679999999999999999888774 7888886
No 45
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=96.49 E-value=0.0016 Score=50.17 Aligned_cols=42 Identities=14% Similarity=0.197 Sum_probs=34.4
Q ss_pred HHHhhcccccCCCCcEEeecCCchHHHHHHHHHC-CCCeEEEecC
Q 040620 169 VLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAF-PDTKCTVFAC 212 (214)
Q Consensus 169 ~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~v~Dl 212 (214)
.+++..+ ..+..+|||||||+|..+..+++.. |+.+++.+|.
T Consensus 66 ~~l~~l~--l~~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~ 108 (213)
T d1dl5a1 66 LFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEY 108 (213)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHhhh--ccccceEEEecCccchhHHHHHHHhCCCCcEEEeec
Confidence 3556665 6678899999999999999999876 6778888875
No 46
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=96.48 E-value=0.0031 Score=45.17 Aligned_cols=62 Identities=6% Similarity=0.156 Sum_probs=46.4
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
+..+...|... +++|..+||+.+++++ ..+.++++.|+..|+++.....+|.- ...+.+|+.
T Consensus 38 q~~vL~~l~~~-~~~t~~~la~~l~~~~---~~vsr~l~~L~~~G~v~r~~~~~D~R-~~~l~lT~~ 99 (141)
T d1lnwa_ 38 DVHVLKLIDEQ-RGLNLQDLGRQMCRDK---ALITRKIRELEGRNLVRRERNPSDQR-SFQLFLTDE 99 (141)
T ss_dssp HHHHHHHHHSS-TTCBHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEEEECSSSSS-SEEEEECHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCccH---hHHHHHHHHHHHhhceeeeccCCCCc-chhhccCHH
Confidence 44466677665 6799999999999999 99999999999999999776322211 223555555
No 47
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.41 E-value=0.001 Score=42.35 Aligned_cols=47 Identities=9% Similarity=0.132 Sum_probs=41.6
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
...|+.+|..+ +|+|..|||+.+|+++ ..+.++++.|...|++.+.+
T Consensus 7 ~~~Il~~i~~~-g~~sr~eLa~~~gLS~---~Tvs~iv~~L~~~glv~e~g 53 (70)
T d1z6ra1 7 AGAVYRLIDQL-GPVSRIDLSRLAQLAP---ASITKIVHEMLEAHLVQELE 53 (70)
T ss_dssp HHHHHHHHHSS-CSCCHHHHHHHTTCCH---HHHHHHHHHHHHHTSEEEC-
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCcCH---HHHHHHHHHHHHCCCEEeeC
Confidence 34477888887 9999999999999999 99999999999999999865
No 48
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.39 E-value=0.00025 Score=48.30 Aligned_cols=64 Identities=14% Similarity=0.178 Sum_probs=49.7
Q ss_pred HHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 36 AIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 36 a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
-.++.|..+|..+ +++|+.|||+.+++++ ..+.+.|+.|...|+++......+.. .-.|.+|+.
T Consensus 16 p~r~~IL~~L~~~-~~~~~~eLa~~l~is~---~~vs~~l~~L~~~glV~~~~~~~d~r-~~~~~LT~~ 79 (100)
T d1ub9a_ 16 PVRLGIMIFLLPR-RKAPFSQIQKVLDLTP---GNLDSHIRVLERNGLVKTYKVIADRP-RTVVEITDF 79 (100)
T ss_dssp HHHHHHHHHHHHH-SEEEHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEEEEECSSSC-EEEEEECHH
T ss_pred HHHHHHHHHhccC-CCeeHHHHHHHHhhcc---ccccHHHHHHhhhceeEEEEcCcCCc-cccccCCHH
Confidence 3466778888766 8999999999999999 99999999999999998654211111 224888887
No 49
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.35 E-value=0.0035 Score=50.76 Aligned_cols=35 Identities=26% Similarity=0.111 Sum_probs=28.3
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecCC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
..+.++|||||||+|.+++.++++.+ -+++.+|.-
T Consensus 33 ~~~~~~VLDiGcG~G~lsl~aa~~Ga-~~V~aid~s 67 (311)
T d2fyta1 33 IFKDKVVLDVGCGTGILSMFAAKAGA-KKVLGVDQS 67 (311)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEESS
T ss_pred cCCcCEEEEECCCCCHHHHHHHHcCC-CEEEEEeCH
Confidence 34578999999999999999998855 378877753
No 50
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=96.34 E-value=0.0012 Score=41.42 Aligned_cols=45 Identities=22% Similarity=0.363 Sum_probs=38.8
Q ss_pred cchhhhcCC-CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 41 IPDIINNSG-QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 41 lfd~L~~~~-~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|.+++...| .|-++.|||+.+|+++ ..++.+|+.|+..|.+.+..
T Consensus 12 I~~~~~~~g~~PP~vrdl~~~l~~~e---~~~~~lL~~l~~~G~lvkI~ 57 (64)
T d1lvaa3 12 LEDKYRVSRWQPPSFKEVAGSFNLDP---SELEELLHYLVREGVLVKIN 57 (64)
T ss_dssp HHHHHHHHTTSCCBHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEESS
T ss_pred HHHHHHHcCCCCCcHHHHHHHhCCCH---HHHHHHHHHHHHCCCEEEec
Confidence 334444443 7899999999999999 99999999999999999987
No 51
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.33 E-value=0.0028 Score=50.64 Aligned_cols=44 Identities=11% Similarity=0.237 Sum_probs=37.3
Q ss_pred HHHHHhhcccccCCCCcEEeecCCchHHHHHHHHH-CCCCeEEEecC
Q 040620 167 ASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATA-FPDTKCTVFAC 212 (214)
Q Consensus 167 ~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~v~Dl 212 (214)
+..++...+ ..+..+|||+|||+|.++..|++. .|+-+++.+|.
T Consensus 85 ~s~Ii~~l~--i~PG~~VLE~G~GsG~lt~~La~~vgp~G~V~~~d~ 129 (264)
T d1i9ga_ 85 AAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQ 129 (264)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECS
T ss_pred HHHHHHHhC--CCCCCEEEecCcCCcHHHHHHHHhhCCCcEEEEecC
Confidence 345566666 677899999999999999999998 79999999886
No 52
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=96.29 E-value=0.003 Score=50.50 Aligned_cols=44 Identities=20% Similarity=0.272 Sum_probs=36.9
Q ss_pred HHHHHhhcccccCCCCcEEeecCCchHHHHHHHHHC-CCCeEEEecC
Q 040620 167 ASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAF-PDTKCTVFAC 212 (214)
Q Consensus 167 ~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~v~Dl 212 (214)
+..++...+ ..+..+|||+|||+|.++..+++.. |+-+++.+|.
T Consensus 92 ~~~Ii~~l~--i~pG~~VLDiG~GsG~lt~~lA~~~~~~G~V~~vD~ 136 (266)
T d1o54a_ 92 SSFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEK 136 (266)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECC
T ss_pred HHHHHHhhC--CCCCCEEEECCCCCCHHHHHHHHHhCCCcEEEEEeC
Confidence 344566666 7778999999999999999999985 8889999886
No 53
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=96.20 E-value=0.00077 Score=45.57 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=46.4
Q ss_pred HHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 30 SLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 30 ~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+.+|.--.++.|+..|.. +++++.|||+.+|+++ ..+.+-|+.|...|++....
T Consensus 12 fkaL~d~~Rl~Il~~L~~--~~~~v~el~~~l~~s~---~~vS~HL~~L~~~glv~~~r 65 (94)
T d1r1ua_ 12 FKALGDYNRIRIMELLSV--SEASVGHISHQLNLSQ---SNVSHQLKLLKSVHLVKAKR 65 (94)
T ss_dssp HHHTCSHHHHHHHHHHHH--CCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEE
T ss_pred HHHhCCHHHHHHHHHHHc--CCccHHHHHHHHCCCH---HHHHHHHHHHHHCCceEEEE
Confidence 345555566777888887 8999999999999999 99999999999999998776
No 54
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=96.17 E-value=0.0011 Score=45.02 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=46.0
Q ss_pred HHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 31 LSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 31 ~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.+|.--.++.|+..|.. +++++.|||+.+|+++ ..+..-|+.|...|++....
T Consensus 18 kaL~~p~Rl~Il~~L~~--~~~~v~ela~~l~is~---stvS~HL~~L~~aglV~~~r 70 (98)
T d1r1ta_ 18 AVLADPNRLRLLSLLAR--SELCVGDLAQAIGVSE---SAVSHQLRSLRNLRLVSYRK 70 (98)
T ss_dssp HHHCCHHHHHHHHHHTT--CCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEE
T ss_pred HHhCCHHHHHHHHHHHc--CCcCHHHHHHHHCcCH---HHHHHHHHHHHHCCceEEEE
Confidence 45555566778888876 8999999999999999 99999999999999998776
No 55
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.13 E-value=0.0025 Score=49.20 Aligned_cols=33 Identities=6% Similarity=-0.183 Sum_probs=29.1
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.....+|||+|||.|..+..|+++ ..++|.+|+
T Consensus 43 ~~~~~rvLd~GCG~G~~a~~LA~~--G~~V~gvD~ 75 (229)
T d2bzga1 43 GKSGLRVFFPLCGKAVEMKWFADR--GHSVVGVEI 75 (229)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECS
T ss_pred CCCCCEEEEeCCCCcHHHHHHHhC--CCcEEEEeC
Confidence 445679999999999999999997 788999986
No 56
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.12 E-value=0.0025 Score=50.55 Aligned_cols=31 Identities=19% Similarity=0.416 Sum_probs=23.3
Q ss_pred CcEEeecCCchHHHHHHHH----HCCCCe--EEEecC
Q 040620 182 KPLVDVGGSTGTMARAIAT----AFPDTK--CTVFAC 212 (214)
Q Consensus 182 ~~vvDVGGG~G~~~~~l~~----~~P~l~--~~v~Dl 212 (214)
.+|||||||+|.++..|++ ++|+.. ++++|.
T Consensus 42 ~~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD~ 78 (280)
T d1jqea_ 42 IKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEP 78 (280)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECC
T ss_pred CeEEEEcCCCCHHHHHHHHHhhhhccCCceEEEEEeC
Confidence 3799999999998776654 577664 577774
No 57
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=96.08 E-value=0.0016 Score=46.61 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=51.3
Q ss_pred HhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 37 IQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 37 ~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
.+..++..|..+ +++|+.+||+.+++++ ..+.++++.|...|++.......|.- .-.+.+|+. ++.++
T Consensus 33 ~q~~iL~~l~~~-~~~t~~~La~~l~i~~---~~vs~~v~~L~~~gli~r~~~~~D~R-~~~l~lT~~----G~~~~ 100 (140)
T d2etha1 33 TELYAFLYVALF-GPKKMKEIAEFLSTTK---SNVTNVVDSLEKRGLVVREMDPVDRR-TYRVVLTEK----GKEIF 100 (140)
T ss_dssp HHHHHHHHHHHH-CCBCHHHHHHHTTSCH---HHHHHHHHHHHHTTSEEEEECTTTSS-CEEEEECHH----HHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCcCH---HHHHHHHHHHHHCCCeeeeecccccc-hhhhhcCHH----HHHHH
Confidence 344467777777 7899999999999999 99999999999999999776321111 235677777 55543
No 58
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=96.01 E-value=0.0021 Score=49.17 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=25.8
Q ss_pred CCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 181 LKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 181 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.++|||+|||+|.+++.++...+. +++.+|.
T Consensus 49 Gk~VLDlGcGtG~l~i~a~~~ga~-~V~~vDi 79 (197)
T d1ne2a_ 49 GRSVIDAGTGNGILACGSYLLGAE-SVTAFDI 79 (197)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBS-EEEEEES
T ss_pred CCEEEEeCCCCcHHHHHHHHcCCC-ccccccc
Confidence 689999999999999887776544 6888875
No 59
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.92 E-value=0.0011 Score=45.77 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=38.0
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|+-.|... +++|+.|||+.+|+++ ..+.+.|+-|...|++....
T Consensus 25 v~~~L~~~-g~~t~~eia~~~~i~~---~~v~~~l~~L~~~GlV~r~~ 68 (109)
T d1sfxa_ 25 IYSLLLER-GGMRVSEIARELDLSA---RFVRDRLKVLLKRGFVRREI 68 (109)
T ss_dssp HHHHHHHH-CCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHhc-CCCCHHHHHHHhCCCc---chHHHHHHHHHhCCCEEEEe
Confidence 44455554 8999999999999999 99999999999999998653
No 60
>d1u2wa1 a.4.5.5 (A:12-119) Cadmium efflux system accessory protein CadC {Staphylococcus aureus [TaxId: 1280]}
Probab=95.87 E-value=0.0015 Score=45.16 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=48.2
Q ss_pred HHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 29 KSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 29 ~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.+.+|.--.++.|+..|... +++++.|||+.+|+++ ..+.+-|+.|...|++....
T Consensus 24 ~~kaLadp~Rl~Il~~L~~~-~~~~v~ela~~l~~s~---s~vS~HL~~L~~aGlv~~~r 79 (108)
T d1u2wa1 24 ILKAIADENRAKITYALCQD-EELCVCDIANILGVTI---ANASHHLRTLYKQGVVNFRK 79 (108)
T ss_dssp HHHHHHSHHHHHHHHHHHHS-SCEEHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEC-
T ss_pred HHHHhCCHHHHHHHHHHHhC-CCccHHHHHHHHccCh---hHHHHHHHHHHHCCeeEEEE
Confidence 35667777788888888654 8999999999999999 99999999999999999876
No 61
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=95.85 E-value=0.0024 Score=48.13 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=52.5
Q ss_pred HHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCC-CCCccceeeCCCC
Q 040620 30 SLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGK-NEQEEESILLPPH 104 (214)
Q Consensus 30 ~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~-~~~~~~~y~~t~~ 104 (214)
..+|.--.+..|+.+|.. +|+|+.|||+.+|+++ ..+.+-|+.|...|++....... .+-....|.+|+.
T Consensus 13 ~~~l~~p~R~~Il~~L~~--~~~s~~ela~~lg~s~---~~v~~hl~~L~~~glv~~~~~~~~~g~~~k~y~~~~~ 83 (190)
T d1ulya_ 13 IKVMLEDTRRKILKLLRN--KEMTISQLSEILGKTP---QTIYHHIEKLKEAGLVEVKRTEMKGNLVEKYYGRTAD 83 (190)
T ss_dssp HHHHHSHHHHHHHHHHTT--CCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEESSS
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCH---HHHHHHHHHHHHCCCeEEEEeeccCCcceEEEEEccc
Confidence 445555667778899975 8999999999999999 99999999999999997543100 0000234888876
No 62
>d1xd7a_ a.4.5.55 (A:) Hypothetical protein ywnA {Bacillus subtilis [TaxId: 1423]}
Probab=95.84 E-value=0.0024 Score=45.14 Aligned_cols=43 Identities=14% Similarity=0.271 Sum_probs=37.4
Q ss_pred chhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 42 PDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 42 fd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.-.|+.+ +++|.++||+.++++| ..++++|+.|...|++.-..
T Consensus 10 L~~la~~-~~~ss~~IA~~~~~~~---~~v~kIl~~L~~aglV~s~r 52 (127)
T d1xd7a_ 10 LSLISMD-EKTSSEIIADSVNTNP---VVVRRMISLLKKADILTSRA 52 (127)
T ss_dssp HHHHHTC-SCCCHHHHHHHHTSCH---HHHHHHHHHHHHTTSEECCS
T ss_pred HHHHhcC-CCCCHHHHHHHhCcCH---HHHHHHHHHHHHhCcccccC
Confidence 4445555 7899999999999999 99999999999999998554
No 63
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=95.82 E-value=0.0086 Score=42.66 Aligned_cols=65 Identities=11% Similarity=0.255 Sum_probs=48.8
Q ss_pred CcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 40 RIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 40 glfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
.++..|... +|+|+.+||+.+++++ ..+.+++..|...|++......+|.= .-.+.+|+. ++.+.
T Consensus 39 ~iL~~l~~~-~~~t~~~la~~~~i~~---~~vs~~l~~L~~~glv~r~~~~~D~R-~~~v~lT~~----G~~~~ 103 (143)
T d1s3ja_ 39 FVLASLKKH-GSLKVSEIAERMEVKP---SAVTLMADRLEQKNLIARTHNTKDRR-VIDLSLTDE----GDIKF 103 (143)
T ss_dssp HHHHHHHHH-SEEEHHHHHHHHTSCH---HHHHHHHHHHHHTTSEEEEECSSCTT-SEEEEECHH----HHHHH
T ss_pred HHHHHHHHC-CCCCHHHHHHHHCcCH---HHHHHHHHHHHHhhhheeeeecCCCC-ceEEEECHH----HHHHH
Confidence 356667665 7899999999999999 99999999999999998765321110 123777777 66554
No 64
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.75 E-value=0.0039 Score=50.70 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=26.9
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecCC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
+.++|||||||+|.+++.++++-+. +++.+|..
T Consensus 33 ~~~~VLDiGcG~G~ls~~aa~~Ga~-~V~avd~s 65 (316)
T d1oria_ 33 KDKVVLDVGSGTGILCMFAAKAGAR-KVIGIECS 65 (316)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS-EEEEEECS
T ss_pred CcCEEEEEecCCcHHHHHHHHhCCC-EEEEEcCc
Confidence 4689999999999999988887443 78888853
No 65
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=95.74 E-value=0.0013 Score=45.22 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+|+|+.+||+.+++++ ..+.+.++-|...|++....
T Consensus 35 ~~~t~~eLa~~~~i~~---~tvs~~l~~L~~~GlV~r~~ 70 (109)
T d2d1ha1 35 KPITSEELADIFKLSK---TTVENSLKKLIELGLVVRTK 70 (109)
T ss_dssp SCEEHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEE
T ss_pred CCCCHHHHHHHHCccH---hHHHHHHHHHHHCCCEEEee
Confidence 8999999999999999 99999999999999998765
No 66
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=95.70 E-value=0.0042 Score=47.36 Aligned_cols=32 Identities=16% Similarity=0.192 Sum_probs=26.4
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..++|||+|||+|.+++.++.+ +..+++.+|.
T Consensus 46 ~g~~vLDlg~GtG~l~i~a~~~-g~~~v~~vdi 77 (201)
T d1wy7a1 46 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEV 77 (201)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEES
T ss_pred CCCEEEECcCcchHHHHHHHHc-CCCEEEEEcC
Confidence 3579999999999999988765 4458888886
No 67
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.63 E-value=0.0073 Score=49.53 Aligned_cols=56 Identities=11% Similarity=0.183 Sum_probs=41.5
Q ss_pred HHHHhhhhhhh----hHHHHHhhcccccCCCCcEEeecCCchHHHHHHHHH-CCCCeEEEecC
Q 040620 155 FYEAMITDFEL----IASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATA-FPDTKCTVFAC 212 (214)
Q Consensus 155 f~~am~~~~~~----~~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~v~Dl 212 (214)
|...|...++. .+..++...+ ..+..+|||+|||+|.++..|++. .|+-+++.+|.
T Consensus 71 ~~~~~~r~tqiiypkD~~~Il~~l~--i~pG~rVLE~GtGsG~lt~~LAr~vg~~G~V~t~E~ 131 (324)
T d2b25a1 71 YVVLMKRGTAITFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEV 131 (324)
T ss_dssp HHHHSCCSSCCCCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEES
T ss_pred HhhccCCCCcccccccHHHHHHHhC--CCCCCEEEEecccccHHHHHHHHHhCCCcEEEEecC
Confidence 44555544332 2344556665 667899999999999999999987 68989988886
No 68
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}
Probab=95.55 E-value=0.0074 Score=45.32 Aligned_cols=26 Identities=19% Similarity=0.073 Sum_probs=20.1
Q ss_pred CCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 181 LKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 181 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+|||||||+|.++..+. +.+++|.
T Consensus 37 ~~~vLDiGcG~G~~~~~~~------~~~giD~ 62 (208)
T d1vlma_ 37 EGRGVEIGVGTGRFAVPLK------IKIGVEP 62 (208)
T ss_dssp SSCEEEETCTTSTTHHHHT------CCEEEES
T ss_pred CCeEEEECCCCcccccccc------eEEEEeC
Confidence 4589999999999988774 3456664
No 69
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.51 E-value=0.012 Score=45.47 Aligned_cols=43 Identities=16% Similarity=0.071 Sum_probs=33.0
Q ss_pred HHhhcccccCCCCcEEeecCCchHHHHHHHHH-CCCCeEEEecC
Q 040620 170 LIEDCNEVSKGLKPLVDVGGSTGTMARAIATA-FPDTKCTVFAC 212 (214)
Q Consensus 170 ~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~v~Dl 212 (214)
+++.......+..+|||||||+|..+..+++. .|.-+++.+|+
T Consensus 66 ~le~L~~~l~~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~ 109 (224)
T d1i1na_ 66 ALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDH 109 (224)
T ss_dssp HHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHhhccCCCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcC
Confidence 44544222556789999999999999988885 67888888885
No 70
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.39 E-value=0.0051 Score=44.16 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=39.3
Q ss_pred CcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 40 RIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 40 glfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.|+.+|-.+++|+|+.|||+++|+++ ..+.+.++.|...|++....
T Consensus 30 ~i~~~L~~~~~plt~~ela~~l~vsk---~~vs~~l~~L~~~GlV~r~~ 75 (151)
T d1ku9a_ 30 AVYAILYLSDKPLTISDIMEELKISK---GNVSMSLKKLEELGFVRKVW 75 (151)
T ss_dssp HHHHHHHHCSSCEEHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHhCCCCcCHHHHHHHhCCCc---chHHHHHHHHHHCCCEEEEE
Confidence 45555644448999999999999999 99999999999999998764
No 71
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=95.37 E-value=0.0093 Score=42.00 Aligned_cols=67 Identities=9% Similarity=0.222 Sum_probs=50.1
Q ss_pred cCcchhhhcC-CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 39 LRIPDIINNS-GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 39 lglfd~L~~~-~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
+.++..|..+ ++++|..+||+.+++++ ..+.++++.|...|++......+|.- ...+.+|+. ++.+.
T Consensus 32 ~~vL~~l~~~~~~~it~~ela~~~~~~~---~~vs~~l~~L~~~g~v~r~~~~~D~R-~~~i~lT~~----G~~~~ 99 (135)
T d3broa1 32 MTIIDYLSRNKNKEVLQRDLESEFSIKS---STATVLLQRMEIKKLLYRKVSGKDSR-QKCLKLTKK----ANKLE 99 (135)
T ss_dssp HHHHHHHHHTTTSCCBHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEECSSCTT-SEEEEECHH----HHTTH
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHCcCH---hHHHHHHHHHHHHHHHHHHhhhhhhh-hhhhcccHH----HHHHH
Confidence 3345555554 36799999999999999 99999999999999998765321111 235888888 77765
No 72
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.37 E-value=0.0065 Score=49.52 Aligned_cols=33 Identities=21% Similarity=0.124 Sum_probs=26.1
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecCC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
+.++|||||||+|.+++.++++.. -+++..|..
T Consensus 38 ~~~~VLDlGcGtG~ls~~aa~~Ga-~~V~avd~s 70 (328)
T d1g6q1_ 38 KDKIVLDVGCGTGILSMFAAKHGA-KHVIGVDMS 70 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCC-SEEEEEESS
T ss_pred CcCEEEEeCCCCCHHHHHHHHhCC-CEEEEEeCC
Confidence 367999999999999988877643 377877753
No 73
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=95.37 E-value=0.0075 Score=42.63 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=46.8
Q ss_pred chhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 42 PDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 42 fd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
.-.|..+++++|..+||+.+++++ ..+.++++-|+..|+++.....+|.- .-.+.+|+. ++.++
T Consensus 34 L~~l~~~~~~~t~~~la~~~~~~~---~~vs~~v~~L~~~gli~r~~~~~D~R-~~~i~lT~~----G~~~~ 97 (137)
T d2fbha1 34 LLHLARHRDSPTQRELAQSVGVEG---PTLARLLDGLESQGLVRRLAVAEDRR-AKHIVLTPK----ADVLI 97 (137)
T ss_dssp HHHHHHCSSCCBHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEECCBTTBC-SCEEEECTT----HHHHH
T ss_pred HHHHHHcCCCCcHHHHHHHHCCCH---HHHHHHHHHHHHcCCccccCCCCCCC-chhhhcCHH----HHHHH
Confidence 344544435789999999999999 99999999999999999775311111 124777777 65554
No 74
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=95.32 E-value=0.005 Score=43.69 Aligned_cols=61 Identities=11% Similarity=0.260 Sum_probs=46.7
Q ss_pred cCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 39 LRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 39 lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
..++..|..+ +++|..+||+.+++++ ..+.++++-|+..|+++.....+|.- ...+.+|+.
T Consensus 37 ~~vL~~i~~~-~~~t~~~la~~l~~~~---~~~s~~l~~L~~~Gli~r~~~~~D~R-~~~l~lT~~ 97 (136)
T d2bv6a1 37 FLVLTILWDE-SPVNVKKVVTELALDT---GTVSPLLKRMEQVDLIKRERSEVDQR-EVFIHLTDK 97 (136)
T ss_dssp HHHHHHHHHS-SEEEHHHHHHHTTCCT---TTHHHHHHHHHHTTSEEEEECSSSTT-CEEEEECHH
T ss_pred HHHHHHHHcC-CCCCHHHHHHHHCCCH---hHHHHHHHHHHHCCCEEEeecCCccc-chhhccCHH
Confidence 3455667776 7899999999999999 99999999999999998765321111 124566777
No 75
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=95.26 E-value=0.0053 Score=47.83 Aligned_cols=35 Identities=20% Similarity=0.127 Sum_probs=31.5
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHC-CCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAF-PDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~v~Dl 212 (214)
..+..+|||+|||+|..+..+++.- |+-+++.+|+
T Consensus 71 i~pG~~VLDlGaGsG~~t~~la~~VG~~G~V~aVD~ 106 (227)
T d1g8aa_ 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEF 106 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEES
T ss_pred cCCCCEEEEeccCCCHHHHHHHHHhCCCCEEEEEeC
Confidence 6678899999999999999999986 8888998886
No 76
>d2p4wa1 a.4.5.64 (A:1-194) Transcriptional regulatory protein PF1790 {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.22 E-value=0.0052 Score=46.52 Aligned_cols=64 Identities=11% Similarity=0.205 Sum_probs=48.5
Q ss_pred HHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCC-CCCccceeeCCCC
Q 040620 36 AIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGK-NEQEEESILLPPH 104 (214)
Q Consensus 36 a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~-~~~~~~~y~~t~~ 104 (214)
=.+..|+..|.. +|+|+.|||+.+|+++ ..+++-|+.|...|++....... .|.....|.++..
T Consensus 15 ~~R~~Il~~L~~--~~~~~~ela~~l~~s~---~~v~~HL~~L~~~Glv~~~~~~~~~G~~~~~y~l~~~ 79 (194)
T d2p4wa1 15 ETRRRILFLLTK--RPYFVSELSRELGVGQ---KAVLEHLRILEEAGLIESRVEKIPRGRPRKYYMIKKG 79 (194)
T ss_dssp HHHHHHHHHHHH--SCEEHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEECCBTTBCCCEEEEECTT
T ss_pred HHHHHHHHHHHh--CCCCHHHHHHHHCcCH---HHHHHHHHHHHHCCCeEEEEeecCCCCceEEEEeccc
Confidence 344556677776 8999999999999999 99999999999999998654221 1111236888776
No 77
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=95.16 E-value=0.0052 Score=38.10 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=41.0
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
+..|.++|..+ +.+|..+||+.+|+++ ..+.+=++-|...|++..-
T Consensus 7 D~~IL~~L~~n-~r~s~~~iA~~lgis~---~tv~~Ri~~L~~~giI~~~ 52 (63)
T d2cfxa1 7 DLNIIEELKKD-SRLSMRELGRKIKLSP---PSVTERVRQLESFGIIKQY 52 (63)
T ss_dssp HHHHHHHHHHC-SCCCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCcCH---HHHHHHHHHHHHCCCeeeE
Confidence 45677888887 8999999999999999 9999999999999999743
No 78
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=95.10 E-value=0.0037 Score=44.90 Aligned_cols=69 Identities=20% Similarity=0.292 Sum_probs=49.0
Q ss_pred HhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 37 IQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 37 ~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
.++.+...|...++++|..+||+.+++++ ..+.++++-|...|++.......|.- .-.+.+|+. ++.++
T Consensus 35 ~q~~vL~~L~~~~g~~t~~~La~~~~~~~---~~vs~~i~~L~~~glv~r~~~~~DrR-~~~i~LT~~----G~~~~ 103 (145)
T d2hr3a1 35 SQLVVLGAIDRLGGDVTPSELAAAERMRS---SNLAALLRELERGGLIVRHADPQDGR-RTRVSLSSE----GRRNL 103 (145)
T ss_dssp HHHHHHHHHHHTTSCBCHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEEEC-------CCEEEECHH----HHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHCCCH---HHHHHHHHHHHHcCCeEeeeCccchh-HHHhccCHH----HHHHH
Confidence 34556666665447899999999999999 99999999999999998765211111 234667776 55543
No 79
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.02 E-value=0.0023 Score=49.74 Aligned_cols=34 Identities=15% Similarity=0.048 Sum_probs=25.7
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..+..+|||||||+|.++..+++... .+++..|+
T Consensus 49 ~~~g~~vLDlGcG~G~~~~~~~~~~~-~~v~giD~ 82 (257)
T d2a14a1 49 GLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDF 82 (257)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEES
T ss_pred CCCCCEEEEECCCCCHhHHHHhcccc-CcEEEecC
Confidence 34567999999999998876666532 26888886
No 80
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=95.02 E-value=0.0076 Score=42.78 Aligned_cols=65 Identities=17% Similarity=0.190 Sum_probs=47.9
Q ss_pred CcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 40 RIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 40 glfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
.++..|... +|+|+.+||+.+++++ ..+.+++.-|...|+++.....+|.- .-.+.+|+. ++.++
T Consensus 34 ~iL~~i~~~-~~~t~~~la~~l~i~~---~tvs~~l~~L~~~gli~r~~~~~D~R-~~~i~LT~~----G~~~~ 98 (139)
T d2a61a1 34 DILQKIYFE-GPKRPGELSVLLGVAK---STVTGLVKRLEADGYLTRTPDPADRR-AYFLVITRK----GEEVI 98 (139)
T ss_dssp HHHHHHHHH-CCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEEETTEEE-EEEEEECHH----HHHHH
T ss_pred HHHHHHHHc-CCCCHHHHHHHhCCCc---ccchHHHHHHHhcCeeeeeeccCCCC-eEEEEECHH----HHHHH
Confidence 345556555 7899999999999999 99999999999999998765211100 234777777 66554
No 81
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=94.87 E-value=0.0058 Score=43.86 Aligned_cols=59 Identities=15% Similarity=0.183 Sum_probs=44.0
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
+...|..+ +++|..+||+.+++++ ..+.++++-|...|++......+|.- .-.+.+|+.
T Consensus 34 iL~~i~~~-~~~t~~~la~~l~i~~---~tvs~~l~~L~~~glI~r~~~~~D~R-~~~l~LT~~ 92 (144)
T d1lj9a_ 34 YLVRVCEN-PGIIQEKIAELIKVDR---TTAARAIKRLEEQGFIYRQEDASNKK-IKRIYATEK 92 (144)
T ss_dssp HHHHHHHS-TTEEHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEECSSCTT-CEEEEECHH
T ss_pred HHHHHHhC-CCCCHHHHHHHHCccH---hhHHHHHHHHHhhhcccccCCCCCCC-ccccccCHH
Confidence 33446666 6899999999999999 99999999999999999776321111 124556666
No 82
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=94.86 E-value=0.0052 Score=37.65 Aligned_cols=47 Identities=19% Similarity=0.190 Sum_probs=41.2
Q ss_pred HhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 37 IQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 37 ~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
++..|..+|..+ +.+|..+||+++|+++ ..+.+=++.|...|++..-
T Consensus 4 ~D~~Il~~L~~n-~r~s~~eiA~~l~ls~---~~v~~Ri~~L~~~giI~~~ 50 (60)
T d2cyya1 4 IDKKIIKILQND-GKAPLREISKITGLAE---STIHERIRKLRESGVIKKF 50 (60)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHCSCH---HHHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCH---HHHHHHHHHHHHCCCeEeE
Confidence 455678888887 8999999999999999 9999999999999998743
No 83
>d1ylfa1 a.4.5.55 (A:5-142) Hypothetical protein BC1842 {Bacillus cereus [TaxId: 1396]}
Probab=94.83 E-value=0.0075 Score=43.04 Aligned_cols=46 Identities=15% Similarity=0.206 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
.++|+++||+.+++++ ..++++|+.|...|++.-... .|-|.+..-
T Consensus 22 ~~vss~~IA~~~~i~~---~~l~kil~~L~~aGlv~S~rG------~GG~~L~~~ 67 (138)
T d1ylfa1 22 SLCTSDYMAESVNTNP---VVIRKIMSYLKQAGFVYVNRG------PGGAGLLKD 67 (138)
T ss_dssp GGCCHHHHHHHHTSCH---HHHHHHHHHHHHTTSEEEC---------CCEEESSC
T ss_pred CcCcHHHHHHHHCcCH---HHHHHHHHHHHHCCCeEeecC------CCCceecCC
Confidence 6899999999999999 999999999999999987652 344555544
No 84
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.83 E-value=0.0048 Score=37.85 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=40.2
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
+..|..+|..+ +.+|..+||+++|+++ ..+.+=++.|...|++..-
T Consensus 5 D~kIl~~L~~n-~r~s~~~lA~~~gls~---~~v~~Ri~~L~~~giI~~~ 50 (60)
T d1i1ga1 5 DKIILEILEKD-ARTPFTEIAKKLGISE---TAVRKRVKALEEKGIIEGY 50 (60)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHTSCH---HHHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCcCH---HHHHHHHHHHHHCCCeEeE
Confidence 45577788887 8899999999999999 9999999999999998743
No 85
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.81 E-value=0.013 Score=36.33 Aligned_cols=37 Identities=14% Similarity=0.107 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 49 GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 49 ~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+++.+..+||+.+|+.| ..+.+.++-|...|++.+.+
T Consensus 21 ~~~v~~~~iA~~L~vs~---~SVt~mvkrL~~~Glv~~~~ 57 (63)
T d2isya1 21 GVTPLRARIAERLDQSG---PTVSQTVSRMERDGLLRVAG 57 (63)
T ss_dssp TCCCCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEECT
T ss_pred CCCCcHHHHHHHhCCCc---hhHHHHHHHHHHCCCEEEcC
Confidence 48899999999999999 99999999999999999886
No 86
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=94.77 E-value=0.0059 Score=37.79 Aligned_cols=46 Identities=11% Similarity=0.216 Sum_probs=40.9
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
+..|...|..+ +.+|..+||+++|+++ ..+++=++.|...|++..-
T Consensus 7 D~~IL~~L~~~-~r~s~~eiA~~l~ls~---~~v~~Ri~rL~~~GiI~~~ 52 (63)
T d2cg4a1 7 DRGILEALMGN-ARTAYAELAKQFGVSP---ETIHVRVEKMKQAGIITGA 52 (63)
T ss_dssp HHHHHHHHHHC-TTSCHHHHHHHHTSCH---HHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCcCH---HHHHHHHHHHHHCCCeEeE
Confidence 45577888887 8999999999999999 9999999999999999854
No 87
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}
Probab=94.70 E-value=0.012 Score=47.09 Aligned_cols=32 Identities=25% Similarity=0.524 Sum_probs=28.2
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+..+++|+|||+|..++.++ ++|+.+++..|.
T Consensus 110 ~~~~vld~g~GsG~i~~~la-~~~~~~v~a~Di 141 (271)
T d1nv8a_ 110 GIKTVADIGTGSGAIGVSVA-KFSDAIVFATDV 141 (271)
T ss_dssp TCCEEEEESCTTSHHHHHHH-HHSSCEEEEEES
T ss_pred cccEEEEeeeeeehhhhhhh-hcccceeeechh
Confidence 45689999999999999987 579999999886
No 88
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=94.62 E-value=0.0086 Score=42.45 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=46.0
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
+.-.|...++++|..+||+.+++++ ..+.++++.|...|+++.....+|.- ...+.+|+. ++.+.
T Consensus 36 ~L~~l~~~~~~~t~~~la~~l~i~~---~~vs~~l~~L~~~glI~~~~~~~D~R-~~~l~lT~~----G~~~~ 100 (140)
T d3deua1 36 TLHNIHQLPPDQSQIQLAKAIGIEQ---PSLVRTLDQLEDKGLISRQTCASDRR-AKRIKLTEK----AEPLI 100 (140)
T ss_dssp HHHHHHHSCSSEEHHHHHHHHTSCH---HHHHHHHHHHHHTTSEEEC---------CEEEECGG----GHHHH
T ss_pred HHHHHHHcCCCccHHHHHHHHCCCH---hHHHHHHHHHHhCCCEEecccCCCCC-ceeeEECHH----HHHHH
Confidence 4444554336799999999999999 99999999999999998765311111 125888888 66654
No 89
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=94.55 E-value=0.0086 Score=42.51 Aligned_cols=66 Identities=11% Similarity=0.090 Sum_probs=48.9
Q ss_pred cCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 39 LRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 39 lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
..+...|..+ +++|..+||+.+++++ ..+.+++..|...|+++..+...|.- ...+.+|+. ++.+.
T Consensus 37 ~~vL~~l~~~-~~~t~~ela~~~~i~~---~~vs~~v~~L~~~glv~r~~~~~D~R-~~~i~lT~~----G~~~~ 102 (138)
T d1jgsa_ 37 FKVLCSIRCA-ACITPVELKKVLSVDL---GALTRMLDRLVCKGWVERLPNPNDKR-GVLVKLTTG----GAAIC 102 (138)
T ss_dssp HHHHHHHHHH-SSBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEECTTCSS-CEEEEECHH----HHHHH
T ss_pred HHHHHhHHhC-cCCCHHHHHHHHCCCH---hHHHHHHHHHhhCCCEEEeeccCCCC-eeEEEECHH----HHHHH
Confidence 3345555555 7899999999999999 99999999999999998765321211 235777777 55553
No 90
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=94.53 E-value=0.0092 Score=36.75 Aligned_cols=43 Identities=23% Similarity=0.335 Sum_probs=35.7
Q ss_pred chhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 42 PDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 42 fd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+.+..+. ++.+..+||+.+|+++ ..+.+.++-|...|++.+.+
T Consensus 13 ~~l~~~~-~~v~~~~iA~~L~vs~---~SVs~mikrL~~~GlV~~~~ 55 (61)
T d2ev0a1 13 YMLIEEK-GYARVSDIAEALAVHP---SSVTKMVQKLDKDEYLIYEK 55 (61)
T ss_dssp HHHHHHH-SSCCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEC--
T ss_pred HHHHhcC-CCccHHHHHHHhCCCc---hhHHHHHHHHHHCCCEEEcc
Confidence 3333343 8899999999999999 99999999999999999875
No 91
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=94.41 E-value=0.0088 Score=39.26 Aligned_cols=48 Identities=8% Similarity=0.223 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
+++|..+||+.+++++ ..+.++|.-|...|++....+ +- .-.|.+|+.
T Consensus 20 ~~lt~~eLa~~l~i~~---~~vs~~l~~Le~~GlV~r~~D---~R-~~~i~LT~~ 67 (85)
T d3ctaa1 20 AYLTSSKLADMLGISQ---QSASRIIIDLEKNGYITRTVT---KR-GQILNITEK 67 (85)
T ss_dssp EECCHHHHHHHHTSCH---HHHHHHHHHHHHTTSEEEEEE---TT-EEEEEECHH
T ss_pred CCCCHHHHHHHHCCCH---HHHHHHHHHHHHCCCeeeecc---cc-cccceECHH
Confidence 7899999999999999 999999999999999998651 11 233667777
No 92
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}
Probab=94.32 E-value=0.02 Score=42.23 Aligned_cols=33 Identities=9% Similarity=0.041 Sum_probs=26.9
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.....+|||+|||+|.++++.+++ ..+++.+|.
T Consensus 39 ~~~g~~vLDl~~G~G~~~i~a~~~--ga~vv~vD~ 71 (171)
T d1ws6a1 39 YPRRGRFLDPFAGSGAVGLEAASE--GWEAVLVEK 71 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHT--TCEEEEECC
T ss_pred ccCCCeEEEeccccchhhhhhhhc--cchhhhccc
Confidence 345679999999999999998887 457777775
No 93
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.25 E-value=0.0071 Score=47.69 Aligned_cols=40 Identities=13% Similarity=0.104 Sum_probs=27.4
Q ss_pred hhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 172 EDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 172 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+.++.+..+..+|||||||+|.+....+.++.. +++..|.
T Consensus 46 ~~f~~g~~~g~~vLDiGcG~g~~~~~~~~~~~~-~v~~~D~ 85 (263)
T d2g72a1 46 QTFATGEVSGRTLIDIGSGPTVYQLLSACSHFE-DITMTDF 85 (263)
T ss_dssp HHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCS-EEEEECS
T ss_pred HHcCCCCCCCcEEEEeccCCCHHHHHHhcccCC-eEEEEeC
Confidence 334333446789999999999887655555443 6888775
No 94
>d1j75a_ a.4.5.19 (A:) Dlm-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.13 E-value=0.009 Score=35.40 Aligned_cols=48 Identities=13% Similarity=0.287 Sum_probs=42.4
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|-+|...|.++|+|+-+.+|+++++++. ..|+++|..|-..+=+...+
T Consensus 3 EQkILQVL~dagspvk~~ql~k~cqVpk---k~lNqVL~rlkke~kVsl~~ 50 (57)
T d1j75a_ 3 EQKILQVLSDDGGPVKIGQLVKKCQVPK---KTLNQVLYRLKKEDRVSSPE 50 (57)
T ss_dssp HHHHHHHHHHHCSCEEHHHHHHHHCSCH---HHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHCCCH---HHHHHHHHHHHhccccccCC
Confidence 4456778888889999999999999999 99999999999988888776
No 95
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=94.02 E-value=0.0075 Score=40.18 Aligned_cols=49 Identities=16% Similarity=0.127 Sum_probs=44.1
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
++.+...|..+++++. +.+.++|..|...|++.+. ++.|.+|+. +..|+
T Consensus 17 ~g~~kT~i~~~aNLs~---~~~~kyl~~L~~~GLI~~~--------~~~Y~iT~k----G~~~L 65 (90)
T d1r7ja_ 17 SGSPKTRIMYGANLSY---ALTGRYIKMLMDLEIIRQE--------GKQYMLTKK----GEELL 65 (90)
T ss_dssp TCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEE--------TTEEEECHH----HHHHH
T ss_pred CCCCccHHHHHcCCCH---HHHHHHHHHHHHCCCeeec--------CCEEEECcc----HHHHH
Confidence 3457899999999999 9999999999999999877 589999999 88775
No 96
>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}
Probab=94.02 E-value=0.028 Score=42.99 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=30.5
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
....+++|||.|.|.=++-++=.+|+.+++++|-
T Consensus 64 ~~~~~ilDiGsGaG~PGi~laI~~p~~~~~Lves 97 (207)
T d1jsxa_ 64 LQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDS 97 (207)
T ss_dssp CCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEES
T ss_pred hcCCceeeeeccCCceeeehhhhcccceEEEEec
Confidence 3457999999999999999999999999999884
No 97
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}
Probab=93.99 E-value=0.037 Score=42.75 Aligned_cols=39 Identities=13% Similarity=0.272 Sum_probs=29.7
Q ss_pred HHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEec
Q 040620 169 VLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFA 211 (214)
Q Consensus 169 ~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~D 211 (214)
.+++..+ ..+..+|||||||+|.++..|++.- -+++.+|
T Consensus 61 ~ml~~L~--l~~g~~VLdIG~GsGy~ta~La~l~--~~V~aiE 99 (224)
T d1vbfa_ 61 FMLDELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVE 99 (224)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEE
T ss_pred HHHHHhh--hcccceEEEecCCCCHHHHHHHHHh--ccccccc
Confidence 3556666 6778899999999999998888874 3555555
No 98
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=93.95 E-value=0.017 Score=36.54 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=35.0
Q ss_pred hcCCCCCCHHHHHHHcCC-CCCCcccHHHHHHHHHhCCceeeec
Q 040620 46 NNSGQPMTLTQIIVALNV-HPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 46 ~~~~~p~t~~eLA~~~g~-~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
..+|-|-|+.|||+.+|+ ++ ..+++.|..|...|++...+
T Consensus 19 ~~~G~~Ps~rei~~~~g~~S~---stv~~~l~~Le~kG~I~r~~ 59 (71)
T d1jhfa1 19 SQTGMPPTRAEIAQRLGFRSP---NAAEEHLKALARKGVIEIVS 59 (71)
T ss_dssp HHHSSCCCHHHHHHHTTCSSH---HHHHHHHHHHHHTTSEEECS
T ss_pred HHhCCCCCHHHHHHHcCCCCH---HHHHHHHHHHHHCcCeecCC
Confidence 345578899999999999 56 78999999999999999874
No 99
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=93.77 E-value=0.047 Score=42.01 Aligned_cols=43 Identities=19% Similarity=0.178 Sum_probs=31.2
Q ss_pred HHhhcccccCCCCcEEeecCCchHHHHHHHHH------CCCCeEEEecC
Q 040620 170 LIEDCNEVSKGLKPLVDVGGSTGTMARAIATA------FPDTKCTVFAC 212 (214)
Q Consensus 170 ~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~------~P~l~~~v~Dl 212 (214)
+++.......+..+|||||||+|..+..+++. ++..+++.+|.
T Consensus 70 ~l~~L~~~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~ 118 (223)
T d1r18a_ 70 ALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEH 118 (223)
T ss_dssp HHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEES
T ss_pred HHHHHhhccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEec
Confidence 44544212556789999999999999888775 46677777764
No 100
>d2hzta1 a.4.5.69 (A:4-98) Putative transcriptional regulator YtcD {Bacillus subtilis [TaxId: 1423]}
Probab=93.50 E-value=0.034 Score=37.07 Aligned_cols=74 Identities=9% Similarity=-0.001 Sum_probs=53.7
Q ss_pred HHHHHHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHc-CCCCCCcccHHHHHHHHHhCCceeeecCCCCCCcccee
Q 040620 21 WSYTYNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVAL-NVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESI 99 (214)
Q Consensus 21 ~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y 99 (214)
++++.+-|...+|.. |.. |+....||.+.+ |+++ +-|.+=|+.|...|++......+.-. .-.|
T Consensus 5 l~ilg~kW~l~Il~~---------L~~--g~~rF~el~~~l~gis~---~~Ls~rLk~Le~~glv~r~~~~~~p~-~veY 69 (95)
T d2hzta1 5 LEVIGGKWKCVILCH---------LTH--GKKRTSELKRLMPNITQ---KMLTQQLRELEADGVINRIVYNQVPP-KVEY 69 (95)
T ss_dssp HHHHCSTTHHHHHHH---------HTT--CCBCHHHHHHHCTTSCH---HHHHHHHHHHHHTTSEEEEEECSSSC-EEEE
T ss_pred HHHHcCCCHHHHHHH---------HHc--CCCCHHHHHHHhhcCCh---hHHHHHHHHHHHhHHHhheecccccc-chhh
Confidence 444555555555543 223 899999999998 9999 99999999999999998764310000 2349
Q ss_pred eCCCCCcccccccc
Q 040620 100 LLPPHLDFFSRISL 113 (214)
Q Consensus 100 ~~t~~~~~~s~~l~ 113 (214)
.+|+. ++.|.
T Consensus 70 ~LT~~----G~~L~ 79 (95)
T d2hzta1 70 ELSEY----GRSLE 79 (95)
T ss_dssp EECTT----GGGGH
T ss_pred hhhhh----HHHHH
Confidence 99999 88875
No 101
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.38 E-value=0.025 Score=35.65 Aligned_cols=45 Identities=11% Similarity=0.200 Sum_probs=39.0
Q ss_pred CCCCHHHHHHHc-CCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCC
Q 040620 50 QPMTLTQIIVAL-NVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPP 103 (214)
Q Consensus 50 ~p~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~ 103 (214)
.++++++|++++ +++. ..++..++.|...|++--.-+ +++|+.|.
T Consensus 22 eGi~~~el~~~l~~~~~---~~i~~aid~L~~eG~IYsTiD------ddHfkstd 67 (69)
T d1dpua_ 22 EGLNFQDLKNQLKHMSV---SSIKQAVDFLSNEGHIYSTVD------DDHFKSTD 67 (69)
T ss_dssp TTEEHHHHHHHSTTSCH---HHHHHHHHHHHHTTSEEECSS------TTEEEESS
T ss_pred cCcCHHHHHHHccCCCH---HHHHHHHHHHHhCCceecccc------cchhcccC
Confidence 789999999999 7998 999999999999999975543 68888764
No 102
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=93.32 E-value=0.028 Score=44.38 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=28.5
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.+..+|||+|||+|.+++.++++ +..+++..|+
T Consensus 106 ~~g~~VlD~~aG~G~~~l~~a~~-~~~~V~avd~ 138 (260)
T d2frna1 106 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEK 138 (260)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHH-TCCEEEEECC
T ss_pred CCccEEEECcceEcHHHHHHHHh-CCcEEEEecC
Confidence 35789999999999999999987 5678888886
No 103
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=93.07 E-value=0.0059 Score=43.22 Aligned_cols=65 Identities=14% Similarity=0.154 Sum_probs=47.7
Q ss_pred CcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 40 RIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 40 glfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
.++..|... +++|..+||+.+++++ ..+.++++-|...|+++.....+|.- .-.+.+|+. +..+.
T Consensus 34 ~vL~~l~~~-~~~t~~~la~~~~i~~---~~vs~~i~~L~~~gli~r~~~~~D~R-~~~l~lT~~----G~~~~ 98 (136)
T d2fbia1 34 RVIRILRQQ-GEMESYQLANQACILR---PSMTGVLARLERDGIVRRWKAPKDQR-RVYVNLTEK----GQQCF 98 (136)
T ss_dssp HHHHHHHHH-CSEEHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEEEEETTEEE-EEEEEECHH----HHHHH
T ss_pred HHHHHHHHc-CCCCHHHHHHHHCCCH---HHHHHHHHHHHHCCCEEEeecCccCc-hhhhccCHH----HHHHH
Confidence 345556665 7899999999999999 99999999999999998765321110 123666776 55554
No 104
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=92.67 E-value=0.0091 Score=42.28 Aligned_cols=64 Identities=9% Similarity=0.156 Sum_probs=48.5
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
+...|... +++|..+||+.+++++ ..+.+++..|...|++.......|.- .-...+|+. ++.+.
T Consensus 38 vL~~l~~~-~~~t~~~La~~~~i~~---~~vsr~i~~L~~~glv~r~~~~~D~R-~~~i~lT~~----G~~~~ 101 (137)
T d1z91a1 38 ALLLLWEH-ETLTVKKMGEQLYLDS---GTLTPMLKRMEQQGLITRKRSEEDER-SVLISLTED----GALLK 101 (137)
T ss_dssp HHHHHHHH-SEEEHHHHHHTTTCCH---HHHHHHHHHHHHHTSEECCBCSSCTT-SBEEEECHH----HHSGG
T ss_pred HHHHHHcC-CCCCHHHHHHHHCcCH---HHHHHHHHHHhhccceEEeecCCCCC-eEEEEECHH----HHHHH
Confidence 34455554 7899999999999999 99999999999999998775311111 234778888 76665
No 105
>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}
Probab=92.30 E-value=0.043 Score=42.82 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=30.9
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+....+++|||.|.|.=++-++=.+|+++++.+|-
T Consensus 68 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~v~Lves 102 (239)
T d1xdza_ 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDS 102 (239)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEES
T ss_pred ccCCCeEEeecCCCchHHHHHHHhCCCccceeecc
Confidence 34567999999999999999999999999999873
No 106
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.27 E-value=0.083 Score=40.38 Aligned_cols=41 Identities=22% Similarity=0.245 Sum_probs=29.9
Q ss_pred HHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 169 VLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 169 ~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.+++..+ ..+..+|||||||+|..+..+++.. +.+++.+|.
T Consensus 69 ~ml~~L~--l~~g~~VLeIGsGsGY~taila~l~-g~~V~~ie~ 109 (215)
T d1jg1a_ 69 IMLEIAN--LKPGMNILEVGTGSGWNAALISEIV-KTDVYTIER 109 (215)
T ss_dssp HHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHH-CSCEEEEES
T ss_pred HHHHhhc--cCccceEEEecCCCChhHHHHHHhh-CceeEEEec
Confidence 3455555 6678899999999999999888764 344655553
No 107
>d2gxba1 a.4.5.19 (A:140-198) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.26 E-value=0.057 Score=32.49 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=38.1
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
++..|.+. ...|+..||.+++++. +.++|.|-.|...|.+++.+
T Consensus 7 ~l~~lg~~-~~~tA~~LA~kl~vpK---k~iNr~LYsL~~kgkl~k~~ 50 (59)
T d2gxba1 7 FLEELGEG-KATTAHDLSGKLGTPK---KEINRVLYSLAKKGKLQKEA 50 (59)
T ss_dssp HHHHHCTT-CCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEC
T ss_pred HHHhcCCc-cchhHHHHHHHhCCcH---HHHHHHHHHHHHccchhhcC
Confidence 34555543 7899999999999999 99999999999999999875
No 108
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=92.16 E-value=0.018 Score=45.25 Aligned_cols=42 Identities=17% Similarity=0.273 Sum_probs=32.9
Q ss_pred HHHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 167 ASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 167 ~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...+++..+ ..+..+|++||+|.|.+...|+++-+ +++.+|+
T Consensus 18 i~kIv~~~~--~~~~d~VLEIGpG~G~LT~~L~~~~~--~v~aIE~ 59 (245)
T d1yuba_ 18 LNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKISK--QVTSIEL 59 (245)
T ss_dssp HHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHSS--EEEESSS
T ss_pred HHHHHHhcC--CCCCCeEEEECCCccHHHHHHHhhcC--ceeEeee
Confidence 456677665 66778999999999999999999844 5666554
No 109
>d1yyva1 a.4.5.69 (A:9-122) Putative transcriptional regulator YtfH {Salmonella typhimurium [TaxId: 90371]}
Probab=91.81 E-value=0.043 Score=37.85 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHc-CCCCCCcccHHHHHHHHHhCCceeeecCCCCCC
Q 040620 16 AQAQVWSYTYNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVAL-NVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQ 94 (214)
Q Consensus 16 ~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 94 (214)
+....++++.+-|...+|.. |.. |+....||.+.+ |+++ +-|.+=|+.|...|++......+.-.
T Consensus 13 pv~~~l~~ig~kW~l~Il~~---------L~~--g~~RF~el~~~l~gis~---~~Ls~rL~~Le~~glv~R~~~~~~p~ 78 (114)
T d1yyva1 13 PSREVLKHVTSRWGVLILVA---------LRD--GTHRFSDLRRKMGGVSE---KMLAQSLQALEQDGFLNRVSYPVVPP 78 (114)
T ss_dssp THHHHHHHHHSHHHHHHHHH---------GGG--CCEEHHHHHHHSTTCCH---HHHHHHHHHHHHHTCEEEEEECSSSC
T ss_pred CHHHHHHHHcCCCHHHHHHH---------Hhc--CCCCHHHHHHHccccch---hHHHHHHHHHHHHHHHhhcccCCCCc
Confidence 35667788888888777754 233 899999999999 7998 99999999999999998764210000
Q ss_pred ccceeeCCCCCcccccccc
Q 040620 95 EEESILLPPHLDFFSRISL 113 (214)
Q Consensus 95 ~~~~y~~t~~~~~~s~~l~ 113 (214)
.-.|.+|+. ++.|.
T Consensus 79 -~veY~LT~~----G~~L~ 92 (114)
T d1yyva1 79 -HVEYSLTPL----GEQVS 92 (114)
T ss_dssp -EEEEEECHH----HHHHH
T ss_pred -hhHhHhhHh----HHHHH
Confidence 234999999 77775
No 110
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=91.76 E-value=0.039 Score=37.87 Aligned_cols=51 Identities=8% Similarity=0.120 Sum_probs=40.9
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
+++|..+||+.+++++ ..+.+++..|...|++......+|.- .-...+|+.
T Consensus 47 ~~~t~~ela~~l~~~~---~~vs~~i~~Le~~gli~r~~~~~D~R-~~~i~LT~~ 97 (115)
T d1hsja1 47 NEISSKEIAKCSEFKP---YYLTKALQKLKDLKLLSKKRSLQDER-TVIVYVTDT 97 (115)
T ss_dssp SEEEHHHHHHSSCCCH---HHHHHHHHHHHTTTTSCCEECCSSSS-CCEEECCSS
T ss_pred CCcCHHHHHHHHCCCh---hhHHHHHHHHHHcCCeEEEeecCCCc-eEEEEECHH
Confidence 6899999999999999 99999999999999999765322211 234677777
No 111
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}
Probab=91.67 E-value=0.071 Score=39.45 Aligned_cols=31 Identities=10% Similarity=0.149 Sum_probs=25.7
Q ss_pred CCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 181 LKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 181 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..++||++||+|.++++.+++-.. +++.+|.
T Consensus 44 ~~~vLDlfaGsG~~giealsrGa~-~v~~VE~ 74 (183)
T d2fpoa1 44 DAQCLDCFAGSGALGLEALSRYAA-GATLIEM 74 (183)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCS-EEEEECS
T ss_pred hhhhhhhhccccceeeeEEecCcc-eeEEEEE
Confidence 579999999999999999988654 6776664
No 112
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=91.54 E-value=0.038 Score=37.89 Aligned_cols=62 Identities=21% Similarity=0.305 Sum_probs=46.2
Q ss_pred hhhhcC-CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCccccccc
Q 040620 43 DIINNS-GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRIS 112 (214)
Q Consensus 43 d~L~~~-~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l 112 (214)
..|..+ ++++|..+||+.+++++ ..+.++++.|...|++......+|.- .-.+.+|+. ++..
T Consensus 40 ~~l~~~~~~~~t~~~la~~l~~~~---~tvs~~i~~Le~~gli~r~~~~~D~R-~~~i~LT~~----G~~~ 102 (115)
T d2frha1 40 TYISENKEKEYYLKDIINHLNYKQ---PQVVKAVKILSQEDYFDKKRNEHDER-TVLILVNAQ----QRKK 102 (115)
T ss_dssp HHHHHTCCSEEEHHHHHHHSSSHH---HHHHHHHHHHHHTTSSCCBCCSSSSC-CCEEECCSH----HHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHCCCH---hHHHHHHHHHHhhhhheeeecccCCc-eEEEEECHH----HHHH
Confidence 344433 26799999999999999 99999999999999999876422221 234777777 6554
No 113
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}
Probab=91.37 E-value=0.056 Score=43.74 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=30.6
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
++.++||.||||.|..+..+++..|..+++++|+
T Consensus 76 ~~pk~VLiiG~G~G~~~~~ll~~~~~~~v~~VEi 109 (312)
T d1uira_ 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDI 109 (312)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEES
T ss_pred CCcceEEEeCCCchHHHHHHHhcCCcceEEEecC
Confidence 3578999999999999999999888889999886
No 114
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.33 E-value=0.077 Score=40.39 Aligned_cols=34 Identities=12% Similarity=0.194 Sum_probs=29.9
Q ss_pred CCCcEEeecCCchHHHHHHHHHCC-CCeEEEecCC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFP-DTKCTVFACH 213 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~v~Dlp 213 (214)
++++||+||+|.|..++.++++.| +.+++.+|..
T Consensus 56 kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~ 90 (214)
T d2cl5a1 56 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMN 90 (214)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESC
T ss_pred CCCEEEEEccCchhHHHHHHHhCCCccEEEEEecc
Confidence 478999999999999999999875 5789998864
No 115
>d1q1ha_ a.4.5.41 (A:) Transcription factor E/IIe-alpha, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=91.22 E-value=0.039 Score=36.27 Aligned_cols=45 Identities=27% Similarity=0.344 Sum_probs=37.9
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|++.|.+.++-+|=++||+++|+.. ..++++|..|...|++....
T Consensus 23 v~~~L~~~~~evtDe~iA~~tgi~i---n~VRk~Ly~L~~~~L~~y~R 67 (88)
T d1q1ha_ 23 VLRILLDKGTEMTDEEIANQLNIKV---NDVRKKLNLLEEQGFVSYRK 67 (88)
T ss_dssp HHHHHHHHCSCBCHHHHHHTTTSCH---HHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHhccCcCCHHHHHHHhCCcH---HHHHHHHHHHHhCCceEEEE
Confidence 5666654335799999999999998 99999999999999998654
No 116
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=91.11 E-value=0.03 Score=33.06 Aligned_cols=40 Identities=13% Similarity=0.069 Sum_probs=31.2
Q ss_pred chhhhcC-CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCce
Q 040620 42 PDIINNS-GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFF 84 (214)
Q Consensus 42 fd~L~~~-~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l 84 (214)
.+.|.++ ..++|+++||+.+|+++ +.+.|+.+......+.
T Consensus 9 ~~yI~~~~~~~~tl~~lA~~~~~s~---~~l~r~Fk~~~g~tp~ 49 (54)
T d1bl0a1 9 LDWIEDNLESPLSLEKVSERSGYSK---WHLQRMFKKETGHSLG 49 (54)
T ss_dssp HHHHHTTTTSCCCCHHHHHHSSSCH---HHHHHHHHHHHSSCHH
T ss_pred HHHHHhccCCCCCHHHHHHHHCcCH---HHHHHHHHHHHCcCHH
Confidence 3445543 37899999999999999 9999998877665543
No 117
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=91.05 E-value=0.026 Score=39.53 Aligned_cols=60 Identities=17% Similarity=0.243 Sum_probs=44.2
Q ss_pred cchhhhcC-CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 41 IPDIINNS-GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 41 lfd~L~~~-~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
+...|... ++++|..+||+.+++++ ..+.+.++-|...|++......+|.- .-...+|+.
T Consensus 38 vL~~l~~~~~~~~~~~~ia~~l~~~~---~~vs~~v~~L~~~glV~r~~~~~D~R-~v~i~LT~~ 98 (125)
T d1p4xa2 38 ILAIITSQNKNIVLLKDLIETIHHKY---PQTVRALNNLKKQGYLIKERSTEDER-KILIHMDDA 98 (125)
T ss_dssp HHHHHHTTTTCCEEHHHHHHHSSSCH---HHHHHHHHHHHHHTSSEEEECSSSTT-CEEEECCHH
T ss_pred HHHHHHHccCCCccHHHHHHHHCCCc---chHHHHHHHHHhccCEeeeecCCCCC-eEEEEECHH
Confidence 45566432 26789999999999999 99999999999999998765322211 223666666
No 118
>d1xmka1 a.4.5.19 (A:294-366) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.60 E-value=0.066 Score=33.87 Aligned_cols=58 Identities=12% Similarity=0.073 Sum_probs=45.8
Q ss_pred HhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcc-cHHHHHHHHHhCCceeeecCCCCCCccceeeCCC
Q 040620 37 IQLRIPDIINNSGQPMTLTQIIVALNVHPNKTR-CTQILVCLLAHSGFFVQQKDGKNEQEEESILLPP 103 (214)
Q Consensus 37 ~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~-~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~ 103 (214)
++-.|++.|... +|.++-+||+.+|++. . -+++.|-.|...|-+...+.+ +-.|.++.
T Consensus 6 ~eekI~~~L~~~-g~~~Al~iak~lGl~k---akeVN~~LY~L~k~g~v~k~~~t-----PP~W~L~~ 64 (73)
T d1xmka1 6 IKEKICDYLFNV-SDSSALNLAKNIGLTK---ARDINAVLIDMERQGDVYRQGTT-----PPIWHLTD 64 (73)
T ss_dssp HHHHHHHHHHHT-CCEEHHHHHHHHCGGG---HHHHHHHHHHHHHTTSEEEECSS-----SCEEEECH
T ss_pred HHHHHHHHHHHc-CCchHHHHHHHhCCCc---HHHHhHHHHHHHHCCCeecCCCC-----CCceeeec
Confidence 455678888887 8999999999999975 4 499999999999999987521 33566554
No 119
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=90.44 E-value=0.018 Score=42.23 Aligned_cols=64 Identities=13% Similarity=0.067 Sum_probs=46.8
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
|...|... +++|..+||+.+++++ ..+.+++.-|...|++......+|.- .-.+.+|+. ++.++
T Consensus 46 vL~~l~~~-~~~t~~~la~~~~l~~---~tvs~~i~rL~~~gli~r~~~~~D~R-~~~l~lT~~----G~~~~ 109 (162)
T d2fxaa1 46 ILWIAYQL-NGASISEIAKFGVMHV---STAFNFSKKLEERGYLRFSKRLNDKR-NTYVQLTEE----GTEVF 109 (162)
T ss_dssp HHHHHHHH-TSEEHHHHHHHTTCCH---HHHHHHHHHHHHHTSEEEECC-------CEEEECHH----HHHHH
T ss_pred HHhhhccC-CCcCHHHHHHHHcCCc---hhhHHHHHHHHHCCCceeecccccCe-eeeeccCHh----HHHHH
Confidence 55667665 7899999999999999 99999999999999999775311111 224666666 55543
No 120
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=90.21 E-value=0.084 Score=36.61 Aligned_cols=47 Identities=6% Similarity=0.127 Sum_probs=39.1
Q ss_pred CcchhhhcC-CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecC
Q 040620 40 RIPDIINNS-GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKD 89 (214)
Q Consensus 40 glfd~L~~~-~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~ 89 (214)
.|+..|... ++++|..+||+.+++++ ..+.+.++.|...|++.....
T Consensus 38 ~iL~~l~~~~~~~~t~~eia~~~~~~~---~~vs~~l~~L~~~g~v~r~~~ 85 (125)
T d1p4xa1 38 ILLTYLFHQQENTLPFKKIVSDLCYKQ---SDLVQHIKVLVKHSYISKVRS 85 (125)
T ss_dssp HHHHHHHSCSCSEEEHHHHHHHSSSCG---GGTHHHHHHHHHTTSCEEEEC
T ss_pred HHHHHHHHhccCCcCHHHHHHHhCCCc---chHHHHHHHHHHCCCceeecc
Confidence 345555443 26899999999999999 999999999999999998763
No 121
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=90.17 E-value=0.037 Score=40.69 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.++|..+||+.+++++ ..+.++++-|...|++....
T Consensus 78 ~~lt~~eLa~~l~i~~---~tvsr~l~~Le~~GlV~r~~ 113 (172)
T d2fbka1 78 EGLRPTELSALAAISG---PSTSNRIVRLLEKGLIERRE 113 (172)
T ss_dssp SCBCHHHHHHHCSCCS---GGGSSHHHHHHHHTSEECCC
T ss_pred CCcCHHHHHHHHCcCH---hHHHHHHHHHHhCCCeeeec
Confidence 3589999999999999 99999999999999999875
No 122
>d2fswa1 a.4.5.69 (A:3-104) Hypothetical protein PG0823 {Porphyromonas gingivalis [TaxId: 837]}
Probab=90.15 E-value=0.045 Score=36.99 Aligned_cols=79 Identities=10% Similarity=0.057 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHc-CCCCCCcccHHHHHHHHHhCCceeeecCCCCCC
Q 040620 16 AQAQVWSYTYNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVAL-NVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQ 94 (214)
Q Consensus 16 ~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 94 (214)
+....++++.+-|...+|... .. |+....||.+.+ |+++ +-|.+=|+-|...|++........-.
T Consensus 9 pv~~~l~ilg~kW~l~Il~~L---------~~--g~~rF~el~~~l~gIs~---~~Ls~rLkeL~~~glv~r~~~~~~p~ 74 (102)
T d2fswa1 9 PVRKSMQIFAGKWTLLIIFQI---------NR--RIIRYGELKRAIPGISE---KMLIDELKFLCGKGLIKKKQYPEVPP 74 (102)
T ss_dssp HHHHHHHHHTSSSHHHHHHHH---------TT--SCEEHHHHHHHSTTCCH---HHHHHHHHHHHHTTSEEEEEECSSSC
T ss_pred CHHHHHHHHcCCCHHHHHHHH---------cc--CCCCHHHHHhhCcccch---hHHHHHHHHHHHCCceeecccCCCCC
Confidence 466677788888877766542 33 789999999998 8999 99999999999999998764210000
Q ss_pred ccceeeCCCCCcccccccc
Q 040620 95 EEESILLPPHLDFFSRISL 113 (214)
Q Consensus 95 ~~~~y~~t~~~~~~s~~l~ 113 (214)
.-.|.+|+. +..|.
T Consensus 75 -~veY~LT~~----G~~L~ 88 (102)
T d2fswa1 75 -RVEYSLTPL----GEKVL 88 (102)
T ss_dssp -EEEEEECHH----HHTTH
T ss_pred -eehhhhhHh----HHHHH
Confidence 234999999 88775
No 123
>d2f2ea1 a.4.5.69 (A:5-146) Hypothetical protein PA1607 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=89.98 E-value=0.084 Score=37.78 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=56.9
Q ss_pred HHHHHHHHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccce
Q 040620 19 QVWSYTYNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEES 98 (214)
Q Consensus 19 ~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~ 98 (214)
..++++..-|...+|+.+. . |+..+.||.+.+|+++ .-|.+=|+.|...|++.+.....+- ...
T Consensus 12 ~~l~ilg~kW~l~Il~~l~---------~--G~~rf~el~~~lgis~---~vLs~rL~~L~~~gLv~r~~~~~p~--r~~ 75 (142)
T d2f2ea1 12 RPLDVIGDGWSMLIVRDAF---------E--GLTRFGEFQKSLGLAK---NILAARLRNLVEHGVMVAVPAESGS--HQE 75 (142)
T ss_dssp TTHHHHCSSSHHHHHHHHH---------T--TCCSHHHHHHHHCCCH---HHHHHHHHHHHHTTSEEEEECSSSS--CEE
T ss_pred HHHHHHcCCCHHHHHHHHH---------c--CCCCHHHHHHHhhccH---HHHHHHHHHHHHhcceeeecCCCCC--eeE
Confidence 3455666677777666542 3 8999999999999999 9999999999999999874321111 245
Q ss_pred eeCCCCCcccccccc
Q 040620 99 ILLPPHLDFFSRISL 113 (214)
Q Consensus 99 y~~t~~~~~~s~~l~ 113 (214)
|.+|+. ++.|.
T Consensus 76 Y~LT~~----G~~L~ 86 (142)
T d2f2ea1 76 YRLTDK----GRALF 86 (142)
T ss_dssp EEECHH----HHTTH
T ss_pred EecCcC----cchHH
Confidence 999999 88875
No 124
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=89.72 E-value=0.12 Score=32.23 Aligned_cols=43 Identities=9% Similarity=-0.008 Sum_probs=38.2
Q ss_pred chhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 42 PDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 42 fd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.+.|..+ +..|+.+||+++|++. +.+.|.|-.|...|.+...+
T Consensus 16 l~~L~~~-~~~tA~~LAk~Lg~~K---k~VNr~LY~L~~~G~v~~~~ 58 (70)
T d1sfua_ 16 VLSLNTN-DYTTAISLSNRLKINK---KKINQQLYKLQKEDTVKMVP 58 (70)
T ss_dssp HHTSCTT-CEECHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEEEC
T ss_pred HHhcCCC-CCchHHHHHHHhCCCH---HHHHHHHHHHHHCCCeecCC
Confidence 4566665 8899999999999988 99999999999999999885
No 125
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=89.29 E-value=0.17 Score=31.73 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=32.8
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
++|-++||+-+|+++ ..+.|.|..|...|++....
T Consensus 27 ~lt~~elA~~lg~sr---~tvsr~l~~l~~~g~I~~~~ 61 (73)
T d1zyba1 27 KVKMDDLARCLDDTR---LNISKTLNELQDNGLIELHR 61 (73)
T ss_dssp ECCHHHHHHHHTSCH---HHHHHHHHHHHHTTSCEEET
T ss_pred ecCHHHHHHHHCCCH---HHHHHHHHHHHHCCCEEecC
Confidence 589999999999999 99999999999999998774
No 126
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=89.25 E-value=0.19 Score=31.03 Aligned_cols=36 Identities=14% Similarity=0.181 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
..++..+||+..|++. .-+++-++.|...|++...+
T Consensus 24 ~~l~~~~La~~~~vSr---~tvr~Al~~L~~~Gli~~~~ 59 (69)
T d2hs5a1 24 ARLSEPDICAALDVSR---NTVREAFQILIEDRLVAHEL 59 (69)
T ss_dssp CEECHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEET
T ss_pred CccCHHHHHHHHCCCH---HHHHHHHHHHHHCCcEEEEc
Confidence 5678999999999999 99999999999999999886
No 127
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.14 E-value=0.16 Score=38.67 Aligned_cols=36 Identities=31% Similarity=0.337 Sum_probs=31.1
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCC-CCeEEEecCC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFP-DTKCTVFACH 213 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~v~Dlp 213 (214)
..+.++||+||++.|..++.+++.-| +.+++.+|..
T Consensus 57 ~~~~k~vLEiGt~~GyStl~~a~al~~~g~i~tie~~ 93 (219)
T d2avda1 57 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVD 93 (219)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC
T ss_pred ccCCCeEEEEechhhHHHHHHHHhCCCCceEEEEeec
Confidence 34589999999999999999999987 6788888864
No 128
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=89.14 E-value=0.23 Score=31.31 Aligned_cols=36 Identities=3% Similarity=-0.022 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
-|+|-+|||.-+|+++ ..+.|.|..|...|++....
T Consensus 28 ~~lt~~eLA~~~G~sr---etvsr~L~~l~~~glI~~~~ 63 (81)
T d2gaua1 28 IYLSREELATLSNMTV---SNAIRTLSTFVSERMLALDG 63 (81)
T ss_dssp CCCCHHHHHHHTTSCH---HHHHHHHHHHHHTTSEEEET
T ss_pred ecCCHHHHHHHHCCCH---HHHHHHHHHHHHCCCEEecC
Confidence 5799999999999999 99999999999999999874
No 129
>d2zcwa1 a.4.5.4 (A:118-199) Transcriptional regulator TTHA1359, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=88.99 E-value=0.17 Score=32.20 Aligned_cols=36 Identities=14% Similarity=0.142 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
-|+|-++||+-+|+++ ..+.|+|..|...|++....
T Consensus 28 i~lt~~elA~~lg~sr---~tv~r~L~~l~~~gli~~~~ 63 (82)
T d2zcwa1 28 LKATHDELAAAVGSVR---ETVTKVIGELAREGYIRSGY 63 (82)
T ss_dssp EECCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEET
T ss_pred ecCCHHHHHHHHCCCH---HHHHHHHHHHHHCCCEEecC
Confidence 4689999999999999 99999999999999999874
No 130
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=88.83 E-value=0.15 Score=31.42 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=33.1
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|+|-+|||+-+|+++ ..+.|.|+-|...|++....
T Consensus 29 ~lt~~~lA~~~G~sR---etvsr~L~~l~~~glI~~~~ 63 (69)
T d1i5za1 29 KITRQEIGQIVGCSR---ETVGRILKMLEDQNLISAHG 63 (69)
T ss_dssp ECCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEET
T ss_pred CCCHHHHHHHHCCCH---HHHHHHHHHHHHCCCEEEcC
Confidence 699999999999999 99999999999999999874
No 131
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 {Dengue virus 2 [TaxId: 11060]}
Probab=88.61 E-value=0.19 Score=39.34 Aligned_cols=41 Identities=12% Similarity=0.021 Sum_probs=30.5
Q ss_pred HHhhcccccCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 170 LIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 170 ~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+.+.+- +....+|||+|||+|..+..+++.-+..++..+|+
T Consensus 58 ~~~~~~--~~~~~~vvDlG~~pGgws~~~a~~~~v~~V~g~~i 98 (257)
T d2p41a1 58 FVERNL--VTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTK 98 (257)
T ss_dssp HHHTTS--SCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECC
T ss_pred HHHhcC--ccCCCeEEEecCCCChHHHHHHhhcCCCceeEEEe
Confidence 444443 45566899999999999999998877666555554
No 132
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=88.53 E-value=0.15 Score=40.26 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=28.3
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.+.++||.||||.|..+..+++ +|..+++++|+
T Consensus 71 ~~p~~vLiiG~G~G~~~~~~l~-~~~~~v~~VEi 103 (276)
T d1mjfa_ 71 PKPKRVLVIGGGDGGTVREVLQ-HDVDEVIMVEI 103 (276)
T ss_dssp SCCCEEEEEECTTSHHHHHHTT-SCCSEEEEEES
T ss_pred CCCceEEEecCCchHHHHHHHH-hCCceEEEecC
Confidence 4578999999999999999986 67778888876
No 133
>d1z7ua1 a.4.5.69 (A:1-108) Hypothetical protein EF0647 {Enterococcus faecalis [TaxId: 1351]}
Probab=88.32 E-value=0.06 Score=36.71 Aligned_cols=80 Identities=10% Similarity=0.032 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHc-CCCCCCcccHHHHHHHHHhCCceeeecCCCCC
Q 040620 15 QAQAQVWSYTYNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVAL-NVHPNKTRCTQILVCLLAHSGFFVQQKDGKNE 93 (214)
Q Consensus 15 ~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~ 93 (214)
-+....++++.+-|...+|.. |.. |+....||.+.+ |+++ +-|.+=|+.|...|++.........
T Consensus 7 c~i~~al~iig~kW~~~Il~~---------L~~--g~~RF~el~~~l~gIS~---~~Ls~rLk~L~~~glv~R~~~~~~p 72 (108)
T d1z7ua1 7 TSINLALSTINGKWKLSLMDE---------LFQ--GTKRNGELMRALDGITQ---RVLTDRLREMEKDGLVHRESFNELP 72 (108)
T ss_dssp HHHHHHHHTTCSTTHHHHHHH---------HHH--SCBCHHHHHHHSTTCCH---HHHHHHHHHHHHHTSEEEEEECCSS
T ss_pred CcHHHHHHHHcCCCHHHHHHH---------HHc--CCCCHHHHHHHCcCCCh---hHHHHHHHHHHHCCcceeeccCCCc
Confidence 344556666667777666654 333 789999999998 7999 9999999999999999875421000
Q ss_pred CccceeeCCCCCcccccccc
Q 040620 94 QEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 94 ~~~~~y~~t~~~~~~s~~l~ 113 (214)
. .-.|.+|+. ++.|.
T Consensus 73 ~-~veY~LT~~----G~~L~ 87 (108)
T d1z7ua1 73 P-RVEYTLTPE----GYALY 87 (108)
T ss_dssp C-EEEEEECHH----HHHHH
T ss_pred c-eehhhhchh----HHHHH
Confidence 0 123999999 77775
No 134
>d1cf7a_ a.4.5.17 (A:) Cell cycle transcription factor E2F-4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.27 E-value=0.2 Score=31.08 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHcCC-CCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNV-HPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~-~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+-++.++.|+++++ .. |+++.+...|.++|++.+..
T Consensus 24 ~~~~L~~aa~~L~v~~k---RRiYDI~NVLe~igli~K~~ 60 (67)
T d1cf7a_ 24 GVLDLKLAADTLAVRQK---RRIYDITNVLEGIGLIEKKS 60 (67)
T ss_dssp TEEEHHHHHHHTTTCCT---HHHHHHHHHHHHHTSEEEEE
T ss_pred CeeeHHHHHHHhcCcch---hhHHHHHHHHhhhhhhhccc
Confidence 67899999999999 67 99999999999999999886
No 135
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=88.16 E-value=0.2 Score=40.39 Aligned_cols=33 Identities=21% Similarity=0.014 Sum_probs=27.7
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.+..+|||++||+|.+++.+++..+ .+++.+|+
T Consensus 144 ~~g~~VLDl~~g~G~~si~~a~~ga-~~V~~vD~ 176 (324)
T d2as0a2 144 QPGDRVLDVFTYTGGFAIHAAIAGA-DEVIGIDK 176 (324)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-SEEEEEES
T ss_pred CCCCeeecccCcccchhhhhhhcCC-cEEEeecC
Confidence 4578999999999999999998754 37888886
No 136
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}
Probab=88.10 E-value=0.15 Score=40.31 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=30.2
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.++++||-||||.|..+..+++..|..+++++|+
T Consensus 74 ~~p~~vLiiGgG~G~~~~~~l~~~~~~~i~~VEI 107 (274)
T d1iy9a_ 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDI 107 (274)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEES
T ss_pred CCcceEEecCCCCcHHHHHHHhcCCcceEEEecC
Confidence 3578999999999999999998888888988886
No 137
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.68 E-value=0.16 Score=40.47 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=30.3
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+++++|+-||||.|..+..+++..|..++++.|+
T Consensus 77 ~~pk~vLiiGgG~G~~~~~~l~~~~~~~v~~vEi 110 (285)
T d2o07a1 77 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEI 110 (285)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEES
T ss_pred cCcCeEEEeCCCchHHHHHHHHcCCcceeeeccC
Confidence 3578999999999999999998888889998876
No 138
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=87.64 E-value=0.31 Score=30.66 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=33.3
Q ss_pred CCC-CHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPM-TLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~-t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
..+ |..+||+..+++. .-+++-++.|...|++....
T Consensus 20 ~~LPse~~La~~~~vSr---~tvr~Al~~L~~~Gli~~~~ 56 (78)
T d3bwga1 20 DKLPVLETLMAQFEVSK---STITKSLELLEQKGAIFQVR 56 (78)
T ss_dssp CBCCCHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEEET
T ss_pred CCCcCHHHHHHHHCCCH---HHHHHHHHHHHHCCcEEEEc
Confidence 556 8999999999999 99999999999999999886
No 139
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.54 E-value=0.08 Score=31.06 Aligned_cols=38 Identities=11% Similarity=0.094 Sum_probs=29.9
Q ss_pred cchhhhcC-CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 040620 41 IPDIINNS-GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHS 81 (214)
Q Consensus 41 lfd~L~~~-~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~ 81 (214)
+.+.|.++ ..|+|+++||+.+++++ +.+.|+.+.....
T Consensus 8 i~~yi~~~~~~~itl~~lA~~~~~S~---~~l~r~Fk~~~g~ 46 (54)
T d1d5ya1 8 LLIWLEGHLDQPLSLDNVAAKAGYSK---WHLQRMFKDVTGH 46 (54)
T ss_dssp HHHHHHTTSSSSCCCHHHHTTTSSCH---HHHHHHHHHHHSS
T ss_pred HHHHHHHccCCCCCHHHHHHHHCcCH---HHHHHHHHHHHCc
Confidence 44555554 48999999999999999 9999987766544
No 140
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}
Probab=87.42 E-value=0.17 Score=40.51 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=30.7
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecCC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
+++++|+-||||.|..+..+++..|..+++++|+-
T Consensus 88 ~~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEID 122 (295)
T d1inla_ 88 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVD 122 (295)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESC
T ss_pred CCCceEEEecCCchHHHHHHHhcCCCceEEEecCC
Confidence 35789999999999999999998888889988863
No 141
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}
Probab=87.31 E-value=0.18 Score=40.74 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=29.8
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+++++||-||||.|..+..+++..|-.+++++|+
T Consensus 105 ~~pk~VLIiGgG~G~~~rellk~~~v~~v~~VEI 138 (312)
T d2b2ca1 105 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEI 138 (312)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECS
T ss_pred CCCCeEEEeCCCchHHHHHHHHcCCcceEEEEcc
Confidence 3578999999999999999998777778998886
No 142
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.29 E-value=0.29 Score=30.67 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=33.3
Q ss_pred CCC-CHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPM-TLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~-t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
..+ |..+||+.++++. .-+++-++.|+..|++....
T Consensus 25 ~~LPs~~eLa~~~~vSr---~tvr~Al~~L~~~G~i~~~~ 61 (74)
T d1hw1a1 25 TILPAERELSELIGVTR---TTLREVLQRLARDGWLTIQH 61 (74)
T ss_dssp SBCCCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEET
T ss_pred CCCccHHHHHHHHCCCH---HHHHHHHHHHHHCCcEEEEe
Confidence 556 7999999999999 99999999999999999886
No 143
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=87.09 E-value=0.34 Score=30.51 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
-|+|-+|||.-+|+++ ..+.|.|..|...|++....
T Consensus 29 ~~~t~~eiA~~lG~sr---etvsr~l~~l~~~g~I~~~~ 64 (80)
T d1ft9a1 29 VDFTVEEIANLIGSSR---QTTSTALNSLIKEGYISRQG 64 (80)
T ss_dssp ECCCHHHHHHHHCSCH---HHHHHHHHHHHHTTSSEECS
T ss_pred cCCCHHHHHHHHCCCH---HHHHHHHHHHHHCCCEEECC
Confidence 4799999999999999 99999999999999999764
No 144
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}
Probab=86.49 E-value=0.41 Score=35.08 Aligned_cols=32 Identities=16% Similarity=0.045 Sum_probs=25.8
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...+|||+.||+|.++++.+++-.. +++.+|.
T Consensus 41 ~~~~vLDlfaGsG~~g~ea~srGa~-~v~~ve~ 72 (182)
T d2fhpa1 41 DGGMALDLYSGSGGLAIEAVSRGMD-KSICIEK 72 (182)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCS-EEEEEES
T ss_pred CCCEEEEcccccccccceeeecchh-HHHHHHH
Confidence 4689999999999999999998543 5666664
No 145
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=85.27 E-value=0.27 Score=39.11 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=30.4
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecCC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
+++++||=||||.|..+..+++..|-.+++++|+-
T Consensus 79 ~~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEiD 113 (290)
T d1xj5a_ 79 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEID 113 (290)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESC
T ss_pred CCCcceEEecCCchHHHHHHHhcccceeeEEecCC
Confidence 45789999999999999999998787788888863
No 146
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=84.92 E-value=0.35 Score=30.42 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=32.5
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
-|+|-+|||.-+|+++ ..+.|+|..|...|++....
T Consensus 29 ~~lt~~elA~~~g~sr---etvsr~l~~l~~~glI~~~~ 64 (80)
T d3e5ua1 29 MPLSQKSIGEITGVHH---VTVSRVLASLKRENILDKKK 64 (80)
T ss_dssp SCCCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEC--
T ss_pred eCCCHHHHHHHHCCCH---HHHHHHHHHHHHCCcEEecC
Confidence 5899999999999999 99999999999999998764
No 147
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.69 E-value=0.26 Score=32.05 Aligned_cols=37 Identities=14% Similarity=0.218 Sum_probs=32.9
Q ss_pred CCCCCCHHHHHHHcCC--CCCCcccHHHHHHHHHhCCceeee
Q 040620 48 SGQPMTLTQIIVALNV--HPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 48 ~~~p~t~~eLA~~~g~--~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
.|.|++..+||+..++ ++ ..++..|..|...|++...
T Consensus 20 ~g~Pv~s~~i~~~~~l~~S~---aTIRn~m~~LE~~G~l~~~ 58 (87)
T d1stza1 20 NKKPVSSQRVLEVSNIEFSS---ATIRNDMKKLEYLGYIYQP 58 (87)
T ss_dssp HCSCBCHHHHHHHSCCCSCH---HHHHHHHHHHHHTTSEECC
T ss_pred cCCccCHHHHHHHhCCCCCH---HHHHHHHHHHHHCCcccCC
Confidence 3599999999999776 57 8999999999999999875
No 148
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]}
Probab=83.33 E-value=0.46 Score=37.74 Aligned_cols=33 Identities=9% Similarity=0.069 Sum_probs=26.0
Q ss_pred CCCcEEeecCCchHHHHHHHHH-----CCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIATA-----FPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~-----~P~l~~~v~Dl 212 (214)
...+|+|.+||+|.++.++.++ .++.+++++|+
T Consensus 117 ~~~~vlDp~~GsG~~l~~~~~~l~~~~~~~~~~~g~di 154 (328)
T d2f8la1 117 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDV 154 (328)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CCCEEEeCCCCcchhHHHHHHHHHhccCccceEEEecc
Confidence 4568999999999999998764 35556777775
No 149
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=82.41 E-value=0.82 Score=34.77 Aligned_cols=34 Identities=29% Similarity=0.275 Sum_probs=29.6
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCC-CCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFP-DTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~v~Dl 212 (214)
.+.++||+||.+.|..++.+++..| +.+++.+|.
T Consensus 58 ~~~k~iLEiGT~~GyStl~la~al~~~g~v~tie~ 92 (227)
T d1susa1 58 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDI 92 (227)
T ss_dssp HTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEES
T ss_pred cCCCcEEEecchhhhhHHHHHhhCCCCcEEEEEec
Confidence 3589999999999999999999988 567887775
No 150
>d1okra_ a.4.5.39 (A:) Methicillin resistance regulatory protein MecI {Staphylococcus aureus [TaxId: 1280]}
Probab=82.06 E-value=0.18 Score=34.52 Aligned_cols=47 Identities=21% Similarity=0.349 Sum_probs=38.2
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHc----CCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVAL----NVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~----g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|..|..+|=+. +|+|+.||.+.+ +.++ ..+..+|+-|...|++....
T Consensus 9 E~~VM~~lW~~-~~~t~~ei~~~l~~~~~~~~---sTv~t~L~rL~~Kg~l~r~~ 59 (120)
T d1okra_ 9 EWEVMNIIWMK-KYASANNIIEEIQMQKDWSP---KTIRTLITRLYKKGFIDRKK 59 (120)
T ss_dssp HHHHHHHHHHH-SSEEHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHcC-CCCCHHHHHHHHhcccCccH---HhHHHHHHHHHHCCCeEEEe
Confidence 44556666665 799999988887 5666 79999999999999998775
No 151
>d2dk5a1 a.4.5.85 (A:8-85) DNA-directed RNA polymerase III subunit RPC6, RPO3F {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.54 E-value=0.35 Score=30.80 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=39.3
Q ss_pred cchhhhcCC-CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 41 IPDIINNSG-QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 41 lfd~L~~~~-~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|++++.++| .++...+|-.+++++. ..+.+.|..|.+.+++....
T Consensus 18 VY~~I~~ag~~GIW~~dir~ktnL~~---~~l~K~LK~Lesk~lIK~Vk 63 (78)
T d2dk5a1 18 VYQIIEDAGNKGIWSRDVRYKSNLPL---TEINKILKNLESKKLIKAVK 63 (78)
T ss_dssp HHHHHHHHCTTCEEHHHHHHHTTCCH---HHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHccccceeHHHHHHHcCCCH---HHHHHHHHHHHhcCCceeec
Confidence 456666554 7899999999999999 99999999999999999875
No 152
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}
Probab=80.17 E-value=0.42 Score=38.25 Aligned_cols=31 Identities=16% Similarity=0.055 Sum_probs=25.7
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
..++|+|++||+|.+++++++. ..+++.+|.
T Consensus 145 ~g~rVLDl~~gtG~~s~~~a~g--~~~V~~vD~ 175 (318)
T d1wxxa2 145 RGERALDVFSYAGGFALHLALG--FREVVAVDS 175 (318)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEES
T ss_pred CCCeeeccCCCCcHHHHHHHhc--CCcEEeecc
Confidence 4689999999999999998865 456777775
No 153
>d2obpa1 a.4.5.71 (A:12-92) Putative DNA-binding protein ReutB4095 {Ralstonia eutropha [TaxId: 106590]}
Probab=79.81 E-value=0.58 Score=29.45 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=40.6
Q ss_pred CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 49 GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 49 ~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
|+|-|...||++.+++= ..|+|.|-.|...|+....-. +++ .++=++|+.
T Consensus 22 g~~WSLaklsKra~~PM---S~LRR~LTqL~~aGl~~t~~~--edG-~G~A~Lt~~ 71 (81)
T d2obpa1 22 ATPWSLPKIAKRAQLPM---SVLRRVLTQLQAAGLADVSVE--ADG-RGHASLTQE 71 (81)
T ss_dssp CCCCBHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEEC--TTS-CEEEEECHH
T ss_pred CCCccHHHHHhhcCCcH---HHHHHHHHHHhhcCceeeeec--cCC-cceeeccHH
Confidence 47999999999999998 999999999999999986531 122 566777766
No 154
>d2p8ta1 a.4.5.72 (A:14-82) Hypothetical protein PH0730 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=79.61 E-value=0.96 Score=27.93 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.|+-...||+.+++.+ +.++..++.|-..|++....
T Consensus 16 qPiGRr~La~~L~l~E---r~vRte~~~Lk~~gLI~~~~ 51 (69)
T d2p8ta1 16 EPLGRKQISERLELGE---GSVRTLLRKLSHLDIIRSKQ 51 (69)
T ss_dssp SCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEC-
T ss_pred CCccHHHHHHHcCCcH---HHHHHHHHHHHHCCCeeeeC
Confidence 7999999999999999 99999999999999999886
No 155
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=78.52 E-value=0.96 Score=36.11 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=27.7
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
....++|||+.||+|.+++.+++. ..++|.+|.
T Consensus 130 ~~~~~rVLdlf~~tG~~sl~aa~~--GA~V~~VD~ 162 (309)
T d2igta1 130 ADRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDA 162 (309)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT--TCEEEEECS
T ss_pred ccCCCeEEEecCCCcHHHHHHHhC--CCeEEEEeC
Confidence 345789999999999999999876 568888885
No 156
>d2g9wa1 a.4.5.39 (A:3-124) Hypothetical protein Rv1846c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=76.57 E-value=0.42 Score=32.76 Aligned_cols=51 Identities=18% Similarity=0.186 Sum_probs=39.2
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCC-CCcccHHHHHHHHHhCCceeeec
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHP-NKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~-~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|..|.++|=+.|+|+|+.||.+.+.-+. -....+..+|+-|+..|++....
T Consensus 9 E~~IM~~lW~~g~~~t~~eI~~~l~~~~~~~~sTV~T~L~rL~~Kg~l~~~~ 60 (122)
T d2g9wa1 9 ERAVMDHLWSRTEPQTVRQVHEALSARRDLAYTTVMAVLQRLAKKNLVLQIR 60 (122)
T ss_dssp HHHHHHHHHTCSSCEEHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHcCCCCccHHHHHHHHhccCCCcHHHHHHHHHHHHHCCCEEEee
Confidence 4456666666557899999999996432 12268999999999999999876
No 157
>d1lvaa4 a.4.5.35 (A:575-634) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=76.21 E-value=3.5 Score=24.48 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=38.5
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+...+..+ +++|+.+.-+.+|++. .+.-.+|.++=..|+....+
T Consensus 9 ~i~~l~~~-g~~~v~~frd~~g~sR---K~ai~lLE~~D~~~~T~R~g 52 (60)
T d1lvaa4 9 VIKNLAST-GPFGLAEARDALGSSR---KYVLPLLEYLDQVKFTRRVG 52 (60)
T ss_dssp HHHHHHTT-SCBCHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHHhc-CCCcHHHHHHHHCccH---HHHHHHHHHHhhcCCeEeeC
Confidence 34456665 8999999999999998 89999999999999999886
No 158
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.92 E-value=1.2 Score=35.63 Aligned_cols=32 Identities=6% Similarity=0.102 Sum_probs=24.7
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEec
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFA 211 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~D 211 (214)
...+|||||.|.|.+...|+++.---++++++
T Consensus 43 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~v~~iE 74 (322)
T d1i4wa_ 43 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLE 74 (322)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCCCEEEEEE
Confidence 45689999999999999999874223566655
No 159
>d1nd9a_ a.6.1.6 (A:) N-terminal subdomain of bacterial translation initiation factor IF2 {Escherichia coli [TaxId: 562]}
Probab=74.49 E-value=0.46 Score=27.43 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=25.1
Q ss_pred CCHHHHHHHcCCCCCCcccHHHHHHHHHhCCcee
Q 040620 52 MTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFV 85 (214)
Q Consensus 52 ~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~ 85 (214)
+|++++|+.+|+++ .|+|.-|...|+-.
T Consensus 3 vTVk~lA~~v~~~v------d~Ll~Ql~~AGl~k 30 (49)
T d1nd9a_ 3 VTIKTLAAERQTSV------ERLVQQFADAGIRK 30 (49)
T ss_dssp ECTTHHHHHHSSSH------HHHHHHHHHHTSCC
T ss_pred ccHHHHHHHHCcCH------HHHHHHHHHcCCCC
Confidence 68999999999998 88899999999953
No 160
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=74.46 E-value=1.8 Score=28.48 Aligned_cols=60 Identities=10% Similarity=0.027 Sum_probs=42.5
Q ss_pred HHhHHHHHHHHHhcCcch--hhhcCCCCCCHHHHHHHcCCCCCCcc-cHHHHHHHHHhCCceeeec
Q 040620 26 NYMKSLSLKRAIQLRIPD--IINNSGQPMTLTQIIVALNVHPNKTR-CTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 26 g~~~~~~L~~a~~lglfd--~L~~~~~p~t~~eLA~~~g~~~~~~~-~l~rlLr~L~~~g~l~~~~ 88 (214)
|-+....+..+-..|.-. -..-.--++|-+|||.-+|+.+ | .+.|+|+.|...|++....
T Consensus 4 G~va~~Ll~La~~~G~~~~~g~~i~~~~lTqeeLA~~lG~s~---ReTVsR~L~~L~~~GlI~~~~ 66 (100)
T d2bgca1 4 GSICSQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAH---SSAVSRIISKLKQEKVIVYKN 66 (100)
T ss_dssp HHHHHHHHHHHHHHEEEETTEEEECCSCCCHHHHHHHTTCCC---HHHHHHHHHHHHHTTSEEEET
T ss_pred cHHHHHHHHHHHHhCCCCCCCeEEeccccCHHHHHHHhCCch---HHHHHHHHHHHHHCCCEEEcC
Confidence 445556666666666532 1111102699999999999975 5 6899999999999999874
No 161
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=74.28 E-value=1.2 Score=26.54 Aligned_cols=22 Identities=18% Similarity=0.215 Sum_probs=18.4
Q ss_pred CCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 52 MTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 52 ~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
+|+.|||+.+|+++ ..+.+.|+
T Consensus 1 vTl~diA~~agvS~---sTVSrvLn 22 (59)
T d1uxda_ 1 MKLDEIARLAGVSR---TTASYVIN 22 (59)
T ss_dssp CCHHHHHHHHTSCT---THHHHHHH
T ss_pred CCHHHHHHHHCcCH---HHHHHHHc
Confidence 58999999999998 77777764
No 162
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=74.04 E-value=0.38 Score=31.02 Aligned_cols=26 Identities=15% Similarity=0.123 Sum_probs=23.6
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLL 78 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L 78 (214)
++.|+.+||+.+|+++ ..|++|++-.
T Consensus 22 ~g~s~~~vA~~lGIs~---~tl~~W~k~~ 47 (89)
T d2jn6a1 22 DGASLQQIANDLGINR---VTLKNWIIKY 47 (89)
T ss_dssp GGSCHHHHHHHHTSCH---HHHHHHHHHH
T ss_pred CCCcHHHHHHHHCCCH---HHHHHHHHHH
Confidence 4699999999999999 9999999865
No 163
>d1v4ra1 a.4.5.6 (A:1-100) Transcriptional repressor TraR, N-terminal domain {Streptomyces sp. [TaxId: 1931]}
Probab=73.96 E-value=0.85 Score=30.01 Aligned_cols=36 Identities=11% Similarity=0.281 Sum_probs=33.0
Q ss_pred CCC-CHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPM-TLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~-t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
..+ |..+||+.+|++. .-+++-++.|...|++....
T Consensus 31 ~~LPs~r~La~~~~vSr---~tvr~Al~~L~~~Gli~~~~ 67 (100)
T d1v4ra1 31 DTLPSVADIRAQFGVAA---KTVSRALAVLKSEGLVSSRG 67 (100)
T ss_dssp SBCCCHHHHHHHSSSCT---THHHHHTTTTTTSSCCEEET
T ss_pred CCCccHHHHHHHHCCCH---HHHHHHHHHHHHCCcEEEec
Confidence 455 8999999999999 99999999999999999876
No 164
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=73.47 E-value=0.93 Score=26.68 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCL 77 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~ 77 (214)
..-|.+|||+.+|+++ ..+...|++
T Consensus 30 RePT~~EiA~~l~~~~---e~V~~~l~a 54 (57)
T d1l0oc_ 30 RAPTVTEIADHLGISP---EDVVLAQEA 54 (57)
T ss_dssp SCCBHHHHHHHHTSCH---HHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCH---HHHHHHHHH
Confidence 5679999999999999 777666654
No 165
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=73.38 E-value=0.71 Score=28.01 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=25.4
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
|..|+.++. .++|..|||+.+++++ +.++..++
T Consensus 11 E~~vl~ll~---~G~s~~eIA~~l~iS~---~TV~~~~~ 43 (67)
T d1a04a1 11 ERDILKLIA---QGLPNKMIARRLDITE---STVKVHVK 43 (67)
T ss_dssp HHHHHHHHH---TTCCHHHHHHHHTCCH---HHHHHHHH
T ss_pred HHHHHHHHH---hCCCHHHHHHHHCCCH---HHHHHHHH
Confidence 455677777 5799999999999998 76655543
No 166
>d1xn7a_ a.4.5.62 (A:) Hypothetical protein YhgG {Escherichia coli [TaxId: 562]}
Probab=72.09 E-value=1.9 Score=26.84 Aligned_cols=44 Identities=20% Similarity=0.208 Sum_probs=39.7
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|=|+|+.+ |.+.+.+|++.+..+. ..+..+|.-|.++|=+++.+
T Consensus 7 vRD~iAL~-G~~da~qlS~qL~~P~---Plv~AMLerL~aMGK~erie 50 (78)
T d1xn7a_ 7 VRDLLALR-GRMEAAQISQTLNTPQ---PMINAMLQQLESMGKAVRIQ 50 (78)
T ss_dssp HHHHHHHS-CSBCHHHHHHHTTCCH---HHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHc-CcccHHHHHHHHcCCh---HHHHHHHHHHHHhhcceecc
Confidence 44778887 8999999999999998 99999999999999999875
No 167
>d1gdta1 a.4.1.2 (A:141-183) gamma,delta resolvase (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=71.89 E-value=1.1 Score=25.04 Aligned_cols=24 Identities=13% Similarity=0.169 Sum_probs=21.5
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.++.+.+||+++|++. ..++|+|.
T Consensus 17 ~G~gat~IAk~lgI~R---~SVYR~L~ 40 (43)
T d1gdta1 17 QGLGASHISKTMNIAR---STVYKVIN 40 (43)
T ss_dssp TTCCHHHHHHHHTCCH---HHHHHHHH
T ss_pred cCCCHHHHHHHHCCCH---HHHHHHHh
Confidence 6899999999999998 88888874
No 168
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=70.28 E-value=0.94 Score=27.22 Aligned_cols=33 Identities=12% Similarity=0.030 Sum_probs=25.0
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
|..|+.++. .+.|..|||+++++++ +.++..++
T Consensus 9 E~~vl~l~~---~G~s~~eIA~~l~iS~---~TV~~~~~ 41 (65)
T d1l3la1 9 EATYLRWIA---VGKTMEEIADVEGVKY---NSVRVKLR 41 (65)
T ss_dssp HHHHHHHHT---TTCCHHHHHHHHTCCH---HHHHHHHH
T ss_pred HHHHHHHHH---hcCCHHHHHHHHCCCH---HHHHHHHH
Confidence 445666777 5799999999999998 76655443
No 169
>d2b0la1 a.4.5.66 (A:167-257) GTP-sensing transcriptional pleiotropic repressor CodY, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=69.80 E-value=0.82 Score=29.07 Aligned_cols=46 Identities=9% Similarity=0.112 Sum_probs=39.0
Q ss_pred CcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 40 RIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 40 glfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.||+.|..+.|-+.+..||++.|+.. .-.-.-||-+.+.|+++-..
T Consensus 23 hIf~eL~g~EGllvASkiADrvgiTR---SVIVNALRK~ESAGvIEsrS 68 (91)
T d2b0la1 23 HIFEELDGNEGLLVASKIADRVGITR---SVIVNALRKLESAGVIESRS 68 (91)
T ss_dssp HHTTSSBTTEEEECHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHcCCCcceEeehhhhhhhCchH---HHHHHHHHHhhhcceeeecc
Confidence 47899986557899999999999986 66677889999999998664
No 170
>d1s6la1 a.4.5.79 (A:21-80) Alkylmercury lyase MerB {Escherichia coli [TaxId: 562]}
Probab=69.51 E-value=2.2 Score=25.26 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=28.7
Q ss_pred chhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 42 PDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 42 fd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
...|+. |.|+|++.||..+|-+. ..+ -.+|.++-=.++++
T Consensus 8 Lr~LA~-G~PVs~~~LA~alg~~~---~eV---~~aL~~~p~tEyD~ 47 (60)
T d1s6la1 8 LRELAK-GRPVSRTTLAGILDWPA---ERV---AAVLEQATSTEYDK 47 (60)
T ss_dssp HHHHHT-TCCBCHHHHHHHHTCCH---HHH---HHHHTTCCSSCEET
T ss_pred HHHHhC-CCCcCHHHHHHHhCCCH---HHH---HHHHHhCCCceecC
Confidence 456666 59999999999999987 444 45555555555554
No 171
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=68.59 E-value=1 Score=27.13 Aligned_cols=33 Identities=12% Similarity=0.170 Sum_probs=24.9
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
|..|+.++. .+.|..|||+.+++++ +.++..++
T Consensus 9 E~~vl~l~~---~G~s~~eIA~~L~is~---~TV~~~~~ 41 (67)
T d1fsea_ 9 EREVFELLV---QDKTTKEIASELFISE---KTVRNHIS 41 (67)
T ss_dssp HHHHHHHHT---TTCCHHHHHHHHTSCH---HHHHHHHH
T ss_pred HHHHHHHHH---ccCCHHHHHHHHCCCH---HHHHHHHH
Confidence 445666777 5799999999999998 66655443
No 172
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=67.97 E-value=1.5 Score=30.14 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=41.4
Q ss_pred CcchhhhcC-CCCCCHHHHHHHcC-----CCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 40 RIPDIINNS-GQPMTLTQIIVALN-----VHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 40 glfd~L~~~-~~p~t~~eLA~~~g-----~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
-|++.|.+. +.+.|++||-+.+. ++. ..+.|.|+.|+..|++.+... +++ ...|..+..
T Consensus 20 ~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~---aTVYR~L~~l~e~gli~~~~~--~~~-~~~y~~~~~ 84 (134)
T d1mzba_ 20 KILQMLDSAEQRHMSAEDVYKALMEAGEDVGL---ATVYRVLTQFEAAGLVVRHNF--DGG-HAVFELADS 84 (134)
T ss_dssp HHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCH---HHHHHHHHHHHHHTSEEEECS--SSS-SCEEEESSS
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHhCCCccH---HHHHHHHHHHHhccEEEEEee--cCC-ceEEEecCC
Confidence 467777654 25899999998773 344 679999999999999987653 111 345555444
No 173
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=67.96 E-value=0.97 Score=28.76 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=22.5
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCc
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGF 83 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~ 83 (214)
.-+|+.+||+++++++ ..+.|+++.|--.||
T Consensus 35 ~~~si~~lA~~~~vS~---sTi~Rf~kklG~~gf 65 (83)
T d2o3fa1 35 IESTVNEISALANSSD---AAVIRLCKSLGLKGF 65 (83)
T ss_dssp HTCCHHHHHHHTTCCH---HHHHHHHHHTTCSSH
T ss_pred HHccHHHHHHHHCCCH---HHHHHHHHHhCCCCH
Confidence 4589999999999999 666666555444333
No 174
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}
Probab=67.31 E-value=2.3 Score=30.63 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=24.8
Q ss_pred CCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 181 LKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 181 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...+||+-+|+|.++++.+++-.. +++.+|.
T Consensus 44 ~~~vLDlFaGsG~~glEalSRGA~-~v~fVE~ 74 (183)
T d2ifta1 44 QSECLDGFAGSGSLGFEALSRQAK-KVTFLEL 74 (183)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCS-EEEEECS
T ss_pred cceEeecccCccceeeeeeeecce-eeEEeec
Confidence 468999999999999999998543 5666553
No 175
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=67.18 E-value=1.5 Score=26.19 Aligned_cols=24 Identities=13% Similarity=0.074 Sum_probs=20.7
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.|+|..|||+.+|++. ..++++-+
T Consensus 27 ~~~tl~eIa~~lgiS~---erVrqi~~ 50 (61)
T d1ku3a_ 27 REHTLEEVGAYFGVTR---ERIRQIEN 50 (61)
T ss_dssp SCCCHHHHHHHHTCCH---HHHHHHHH
T ss_pred CCCCHHHHHHHHCCCH---HHHHHHHH
Confidence 7899999999999998 77777653
No 176
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=66.25 E-value=1.1 Score=26.71 Aligned_cols=22 Identities=23% Similarity=0.247 Sum_probs=17.8
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
++|..|||+.+|+++ ..+.+.|
T Consensus 2 ~~Ti~diA~~agvS~---sTVSr~l 23 (59)
T d1efaa1 2 PVTLYDVAEYAGVSY---QTVSRVV 23 (59)
T ss_dssp CCCHHHHHHTTTSCH---HHHHHHH
T ss_pred CCCHHHHHHHHCCCH---HHHHHHH
Confidence 689999999999988 6666554
No 177
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=66.08 E-value=0.82 Score=36.59 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=25.3
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEec
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFA 211 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~D 211 (214)
..+..+|+|+-||.|.++..|+++.. +++.+|
T Consensus 210 ~~~~~~vlDLycG~G~fsl~La~~~~--~V~gvE 241 (358)
T d1uwva2 210 VQPEDRVLDLFCGMGNFTLPLATQAA--SVVGVE 241 (358)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTTSS--EEEEEE
T ss_pred cCCCceEEEecccccccchhcccccc--EEEecc
Confidence 44567999999999999999998753 555554
No 178
>d1p6ra_ a.4.5.39 (A:) Penicillinase repressor BlaI {Bacillus licheniformis [TaxId: 1402]}
Probab=65.79 E-value=1.4 Score=27.80 Aligned_cols=47 Identities=19% Similarity=0.350 Sum_probs=36.7
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcC----CCCCCcccHHHHHHHHHhCCceeeec
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALN----VHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g----~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|+.|.++|=+. +|+|+.||.+.+. ... .-+..+|+-|+..|++....
T Consensus 11 E~~IM~~lW~~-~~~t~~ei~~~l~~~~~~~~---tTv~T~L~rL~~KG~l~~~k 61 (82)
T d1p6ra_ 11 ELEVMKVIWKH-SSINTNEVIKELSKTSTWSP---KTIQTMLLRLIKKGALNHHK 61 (82)
T ss_dssp HHHHHHHHHTS-SSEEHHHHHHHHHHHSCCCH---HHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHhccccCCcH---hHHHHHHHHHHHCCCeEEEe
Confidence 45556666665 7999999887764 344 68999999999999999776
No 179
>d1ldja3 e.40.1.1 (A:411-686) Cullin homolog 1, cul-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.35 E-value=1.3 Score=34.24 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=34.8
Q ss_pred hhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 45 INNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 45 L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
+.+. ..+|+++|++.+|++. ..+.+.|..|+..+++....
T Consensus 204 FN~~-~~~t~~ei~~~~~i~~---~~l~~~L~~L~~~kll~~~~ 243 (276)
T d1ldja3 204 YNTE-DAYTVQQLTDSTQIKM---DILAQVLQILLKSKLLVLED 243 (276)
T ss_dssp GGSS-SEEEHHHHHHHTCCCH---HHHHHHHHHHHHTTTEECSC
T ss_pred hcCC-CccCHHHHHHHHCcCH---HHHHHHHHHHHhCCEEEecC
Confidence 3343 6799999999999998 99999999999999998654
No 180
>d2htja1 a.4.5.73 (A:1-73) P fimbrial regulatory protein PapI {Escherichia coli [TaxId: 562]}
Probab=65.14 E-value=1.3 Score=26.76 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=36.8
Q ss_pred CcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 40 RIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 40 glfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.|+..|.+. ++-+-.|||+++|++. -..+-.|-.|...|-+...+
T Consensus 4 ~Il~fl~~~-~~~~T~EIAea~gvsa---YQARyYL~~Lekegki~RsP 48 (73)
T d2htja1 4 EILEFLNRH-NGGKTAEIAEALAVTD---YQARYYLLLLEKAGMVQRSP 48 (73)
T ss_dssp HHHHHHHHS-CCCCHHHHHHHHTSCH---HHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHhc-CCccHHHHHHHhhhHH---HHHHHHHHHHHHhcCcccCh
Confidence 456667776 5668999999999987 78888888898888888775
No 181
>d2hyec3 e.40.1.1 (C:403-675) Cullin-4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.98 E-value=1.5 Score=33.85 Aligned_cols=57 Identities=12% Similarity=0.254 Sum_probs=38.4
Q ss_pred hhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCC--ceeeecCCCCCCccceeeCCCC
Q 040620 44 IINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSG--FFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 44 ~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g--~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
++.+. ..+|+++|++.+|+++ ..+.+.|..|+... ++.+.+.+.+..+++.|..+..
T Consensus 199 ~fn~~-~~~t~~~i~~~~~i~~---~~l~~~L~~L~~~k~~iL~~~~~~~~~~~~~~~~~N~~ 257 (273)
T d2hyec3 199 MFNEG-DGFSFEEIKMATGIED---SELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGE 257 (273)
T ss_dssp HTTSC-CCEEHHHHHHHTCCCH---HHHHHHHHTTTTTTTCSEEETTCSSSCCSSCEEEECCC
T ss_pred HhcCC-CCCcHHHHHHHHCcCH---HHHHHHHHHHHhcccceeeecCCCCcCCCCCEEEEecc
Confidence 34444 7899999999999999 88999998888544 4555432211112456666654
No 182
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=64.96 E-value=1.2 Score=27.63 Aligned_cols=31 Identities=10% Similarity=-0.052 Sum_probs=24.7
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCc
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGF 83 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~ 83 (214)
..-|.+|||+.+|++. ..+++++.......+
T Consensus 25 R~Pt~~EiA~~lg~s~---~e~~~~l~~~~~~~~ 55 (77)
T d1rp3a1 25 REPTDEEVAKELGIST---EELFKTLDKINFSYI 55 (77)
T ss_dssp SCCCHHHHHHHHTSCH---HHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHCcCH---HHHHHHHHHHhcCCc
Confidence 5679999999999999 888888765544433
No 183
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=64.51 E-value=1.4 Score=26.82 Aligned_cols=35 Identities=9% Similarity=0.057 Sum_probs=27.1
Q ss_pred HHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 36 AIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 36 a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.-|..|+..|. .+.|..|||+.+++++ +.++..+.
T Consensus 15 ~rE~~vl~~l~---~G~s~~eIA~~l~iS~---~TV~~~~~ 49 (70)
T d1yioa1 15 GREQQVLQLTI---RGLMNKQIAGELGIAE---VTVKVHRH 49 (70)
T ss_dssp HHHHHHHHHHT---TTCCHHHHHHHHTCCH---HHHHHHHH
T ss_pred HHHHHHHHHHH---cCCCHHHHHHHHCCCH---HHHHHHHH
Confidence 44566777788 5789999999999998 76665554
No 184
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]}
Probab=64.30 E-value=2.9 Score=34.28 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=27.6
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCC--CeEEEec
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPD--TKCTVFA 211 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~--l~~~v~D 211 (214)
+.+...++|||+..|.++..+++..++ .+++.|+
T Consensus 210 l~kn~vfIDVGAniG~~s~~f~~~~~~~~~kV~aFE 245 (395)
T d2py6a1 210 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIE 245 (395)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEEC
T ss_pred cCCCCEEEECCcCCCHHHHHHHHhcCCCCCEEEEEe
Confidence 456679999999999999999888776 3677665
No 185
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}
Probab=63.63 E-value=3.8 Score=32.35 Aligned_cols=34 Identities=15% Similarity=0.039 Sum_probs=26.0
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecCC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
...++|||+.||+|.+++..+.. -.-+++.+|+-
T Consensus 143 ~~g~~VLdlf~~~G~~sl~aa~~-ga~~V~~vD~s 176 (317)
T d2b78a2 143 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLA 176 (317)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESC
T ss_pred hCCCceeecCCCCcHHHHHHHhC-CCceEEEecCC
Confidence 35789999999999999987764 22357777763
No 186
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=63.52 E-value=1.3 Score=26.08 Aligned_cols=22 Identities=14% Similarity=0.105 Sum_probs=17.7
Q ss_pred CCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 52 MTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 52 ~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
+|+.+||+++|+++ .-+.|.|+
T Consensus 2 vTi~dvA~~agvS~---~TVSr~Ln 23 (57)
T d2hsga1 2 VTIYDVAREASVSM---ATVSRVVN 23 (57)
T ss_dssp CCHHHHHHHTTSCH---HHHHHHHT
T ss_pred cCHHHHHHHHCcCH---HHHHHHhC
Confidence 68999999999988 66666654
No 187
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=63.37 E-value=1.3 Score=26.77 Aligned_cols=28 Identities=18% Similarity=0.127 Sum_probs=21.9
Q ss_pred hhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 43 DIINNSGQPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 43 d~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
++... ..+|-+|+|+.+|+++ ..+.+|.
T Consensus 13 ~~r~~--~gltq~elA~~~gv~~---~~is~ie 40 (69)
T d2a6ca1 13 EHLRN--SGLTQFKAAELLGVTQ---PRVSDLM 40 (69)
T ss_dssp HHHHT--TTCCHHHHHHHHTSCH---HHHHHHH
T ss_pred HHHHH--cCCCHHHHHHHHHcCH---hHHHHHH
Confidence 34444 7899999999999988 7776663
No 188
>d1in4a1 a.4.5.11 (A:255-329) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=61.60 E-value=4 Score=25.37 Aligned_cols=38 Identities=21% Similarity=0.390 Sum_probs=33.1
Q ss_pred CCCCCCHHHHHHHcCCCCCCcccHHHHHH-HHHhCCceeeec
Q 040620 48 SGQPMTLTQIIVALNVHPNKTRCTQILVC-LLAHSGFFVQQK 88 (214)
Q Consensus 48 ~~~p~t~~eLA~~~g~~~~~~~~l~rlLr-~L~~~g~l~~~~ 88 (214)
+|||+.++.||..++-++ +.+..+.. +|...||+.+++
T Consensus 19 ~ggPvGl~tlAa~l~e~~---~TiEdviEPyLiq~G~i~RTp 57 (75)
T d1in4a1 19 RGGPVGLNALAASLGVEA---DTLSEVYEPYLLQAGFLARTP 57 (75)
T ss_dssp TTCCBCHHHHHHHHTSCH---HHHHHHTHHHHHHTTSEEEET
T ss_pred CCCCCcHHHHHHHHcCCh---hHHHHHhhHHHHHhhHHhhCC
Confidence 369999999999999998 77766664 799999999997
No 189
>d2dt5a1 a.4.5.38 (A:4-77) Transcriptional repressor Rex, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=60.84 E-value=0.71 Score=28.95 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=28.9
Q ss_pred CcchhhhcCC-CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 40 RIPDIINNSG-QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 40 glfd~L~~~~-~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
+++..|.+.| .-++.++||+.+|++| ..+++= |..+|.+-..
T Consensus 13 r~L~~l~~~g~~~vSS~~La~~~gi~~---~qVRKD---ls~fG~~G~~ 55 (74)
T d2dt5a1 13 RILEELEAQGVHRTSSEQLGGLAQVTA---FQVRKD---LSYFGSYGTR 55 (74)
T ss_dssp HHHHHHHHTTCCEECHHHHHHHHTSCH---HHHHHH---HHHTTCCCCT
T ss_pred HHHHHHHHCCCeeEcHHHHHHHHCcCH---HHHHHH---HHHhcCCCCC
Confidence 3444555543 4589999999999999 666665 5555666544
No 190
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.22 E-value=5.2 Score=30.94 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=35.1
Q ss_pred HHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 25 YNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 25 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.+||....+....+. .+..+|+++||++|++.+ ..++..|-.+|++....
T Consensus 186 ~~YW~~~i~~~L~~~--------~~~~~si~dis~~T~i~~------~Dii~tL~~l~~l~~~~ 235 (270)
T d2ozua1 186 MAYWKSVILECLYHQ--------NDKQISIKKLSKLTGICP------QDITSTLHHLRMLDFRS 235 (270)
T ss_dssp HHHHHHHHHHHHHHC-------------CHHHHHHHHCBCH------HHHHHHHHHTTCC----
T ss_pred HHHHHHHHHHHHHhC--------CCCceeHHHHHHHhCCCH------HHHHHHHHHCCCEEEEC
Confidence 478888887776542 226799999999999988 78899999999998775
No 191
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.15 E-value=3 Score=32.41 Aligned_cols=49 Identities=8% Similarity=0.092 Sum_probs=35.8
Q ss_pred HHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 25 YNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 25 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.+||....+.... +..+.+|+++||++|++.+ ..++..|-.+|++....
T Consensus 186 ~~YW~~~il~~l~---------~~~~~isI~~is~~T~i~~------~Dii~tL~~l~~l~~~~ 234 (271)
T d2giva1 186 RSYWSWVLLENLR---------DFRGTLSIKDLSQMTSITQ------NDIISTLQSLNMVKYWK 234 (271)
T ss_dssp HHHHHHHHHHHHC---------------CHHHHHHHHCBCH------HHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHHHHH---------hcCCCccHHHHHHHhCCCH------HHHHHHHHHCCCEEEeC
Confidence 3788777666542 2226799999999999988 77899999999998875
No 192
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=59.53 E-value=2.4 Score=25.31 Aligned_cols=23 Identities=9% Similarity=0.083 Sum_probs=19.0
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
..+|.+|||+.+|+++ ..++..+
T Consensus 36 ~~~s~~eIA~~lgis~---~tv~~~~ 58 (71)
T d1rp3a2 36 EELPAKEVAKILETSV---SRVSQLK 58 (71)
T ss_dssp SCCCHHHHHHHTTSCH---HHHHHHH
T ss_pred HhCCHHHHHHHHCCCH---HHHHHHH
Confidence 5799999999999998 7665554
No 193
>d1sd4a_ a.4.5.39 (A:) Penicillinase repressor BlaI {Staphylococcus aureus [TaxId: 1280]}
Probab=59.15 E-value=2 Score=29.12 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=37.5
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCC-CCcccHHHHHHHHHhCCceeeec
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHP-NKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~-~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|+.|.++|=+. +|+|+.||.+.++-.. -+...+..+|+-|+..|++....
T Consensus 8 E~~VM~~lW~~-~~~t~~ei~~~l~~~~~~~~tTv~T~L~rL~~Kg~l~~~~ 58 (122)
T d1sd4a_ 8 EWDVMNIIWDK-KSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYK 58 (122)
T ss_dssp HHHHHHHHHHS-SSEEHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHcC-CCCCHHHHHHHhhccCCCcHhHHHHHHHHHHhhhceeeec
Confidence 44555666666 7999999999884321 12268999999999999998765
No 194
>d1jhga_ a.4.12.1 (A:) Trp repressor, TrpR {Escherichia coli [TaxId: 562]}
Probab=58.94 E-value=2.1 Score=28.33 Aligned_cols=44 Identities=11% Similarity=-0.040 Sum_probs=34.1
Q ss_pred HHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHH
Q 040620 31 LSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLA 79 (214)
Q Consensus 31 ~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~ 79 (214)
-.-..+-++.|+..|.. |.+|..+||+.+|++. ..+.|.-+.|-
T Consensus 40 E~~~la~R~~ia~~L~~--G~~s~reI~~~~gvs~---aTItR~s~~Lk 83 (101)
T d1jhga_ 40 EREALGTRVRIIEELLR--GEMSQRELKNELGAGI---ATITRGSNSLK 83 (101)
T ss_dssp HHHHHHHHHHHHHHHHH--CCSCHHHHHHHHCCCH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc--CCcCHHHHHHHhCCCh---HHHHHHHHHHH
Confidence 34456777889998886 7799999999999998 66666655554
No 195
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=57.68 E-value=2.6 Score=25.68 Aligned_cols=24 Identities=13% Similarity=0.126 Sum_probs=20.7
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.|+|.+|||+.+|++. ..++++-.
T Consensus 24 ~~~tl~eI~~~lgiSr---erVrqie~ 47 (68)
T d2p7vb1 24 TDYTLEEVGKQFDVTR---ERIRQIEA 47 (68)
T ss_dssp SCCCHHHHHHHHTCCH---HHHHHHHH
T ss_pred CcCCHHHHHHHHCCCH---HHHHHHHH
Confidence 7899999999999998 77777653
No 196
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]}
Probab=56.77 E-value=4.9 Score=30.26 Aligned_cols=33 Identities=12% Similarity=0.033 Sum_probs=25.4
Q ss_pred CCCcEEeecCCchHHHHHHHH----HCCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIAT----AFPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~----~~P~l~~~v~Dl 212 (214)
++++||.||...|..+.-+++ ..++.+++.+|+
T Consensus 80 KPk~ILEIGv~~GgS~~~~a~~l~~~~~~~kI~giDI 116 (232)
T d2bm8a1 80 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDR 116 (232)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCCEEEEECCCCchHHHHHHHHHHhcCCCceEEecCc
Confidence 378999999999976654443 347889999886
No 197
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima [TaxId: 2336]}
Probab=56.72 E-value=2.6 Score=26.97 Aligned_cols=23 Identities=22% Similarity=0.245 Sum_probs=20.3
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
.|.|.++||+.+|++. ..++++-
T Consensus 37 ~~~tl~eI~~~lgiSr---ERVRQie 59 (87)
T d1ttya_ 37 KPKTLEEVGQYFNVTR---ERIRQIE 59 (87)
T ss_dssp SCCCHHHHHHHHTCCH---HHHHHHH
T ss_pred CcCCHHHHHHHhCCCH---HHHHHHH
Confidence 7999999999999998 7777664
No 198
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=55.75 E-value=2.2 Score=24.04 Aligned_cols=23 Identities=4% Similarity=-0.001 Sum_probs=19.2
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
.+.|..+||+.+|++. .-+.|++
T Consensus 20 ~G~s~~~iA~~~gVSr---~TiYry~ 42 (47)
T d1ijwc_ 20 KGHPRQQLAIIFGIGV---STLYRYF 42 (47)
T ss_dssp TTCCHHHHHHHHTCCH---HHHHHHS
T ss_pred CCCCHHHHHHHHCcCH---HHHHhhC
Confidence 3589999999999998 7777764
No 199
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=54.61 E-value=2.6 Score=24.72 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=16.8
Q ss_pred CHHHHHHHcCCCCCCcccHHHHHH
Q 040620 53 TLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 53 t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
|+.|||+.+|+++ .-+.|.|+
T Consensus 2 Ti~dvA~~agVS~---sTVSr~ln 22 (57)
T d1qpza1 2 TIKDVAKRANVST---TTVSHVIN 22 (57)
T ss_dssp CHHHHHHHHTSCH---HHHHHHHH
T ss_pred CHHHHHHHHCcCH---HHHHHHHC
Confidence 7899999999988 66666654
No 200
>d1ixsb1 a.4.5.11 (B:243-318) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=53.89 E-value=6.4 Score=24.41 Aligned_cols=37 Identities=22% Similarity=0.366 Sum_probs=32.6
Q ss_pred CCCCCHHHHHHHcCCCCCCcccHHHHHH-HHHhCCceeeec
Q 040620 49 GQPMTLTQIIVALNVHPNKTRCTQILVC-LLAHSGFFVQQK 88 (214)
Q Consensus 49 ~~p~t~~eLA~~~g~~~~~~~~l~rlLr-~L~~~g~l~~~~ 88 (214)
|+|+-++.||..+|-++ +.+..+.. +|...||+.+.+
T Consensus 20 ggPVGl~tlA~~lgE~~---~TiEdviEPyLiq~G~i~RTp 57 (76)
T d1ixsb1 20 GGPVGLATLATALSEDP---GTLEEVHEPYLIRQGLLKRTP 57 (76)
T ss_dssp SSCCCSHHHHGGGSSCT---THHHHTSHHHHHHTTSEEECS
T ss_pred CCCccHHHHHHHHcCCh---hHHHHHhhHHHHHHhHHhhCC
Confidence 59999999999999998 77776664 799999999997
No 201
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=53.50 E-value=1.9 Score=27.31 Aligned_cols=28 Identities=14% Similarity=0.366 Sum_probs=22.6
Q ss_pred hhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 43 DIINNSGQPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 43 d~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
+.+.. ..+|-.+||+++|+++ ..+.+|+
T Consensus 8 e~r~~--~glsq~~LA~~lGvs~---~~is~ie 35 (87)
T d2icta1 8 ESLDE--LNVSLREFARAMEIAP---STASRLL 35 (87)
T ss_dssp HHHHH--HTCCHHHHHHHHTCCH---HHHHHHH
T ss_pred HHHHH--cCCCHHHHHHHHhhcH---HHHHHHH
Confidence 34444 5799999999999999 8888874
No 202
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.36 E-value=9.9 Score=24.67 Aligned_cols=41 Identities=17% Similarity=0.008 Sum_probs=31.0
Q ss_pred hHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHH
Q 040620 28 MKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLA 79 (214)
Q Consensus 28 ~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~ 79 (214)
+...|++.|.+. .+.|.|..|||+.+|+++ ..+++..+.|.
T Consensus 46 iaAa~iY~a~r~--------~~~~~t~~eIa~~~~vs~---~tI~k~yk~l~ 86 (109)
T d1vola2 46 VAAAAIYMASQA--------SAEKRTQKEIGDIAGVAD---VTIRQSYRLIY 86 (109)
T ss_dssp HHHHHHHHHHHT--------SSSCCCHHHHHHHHTCCH---HHHHHHHHHHG
T ss_pred HHHHHHHHHHHH--------cCCCCCHHHHHHHHCCCH---HHHHHHHHHHH
Confidence 466677777654 237899999999999998 77777766653
No 203
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=52.25 E-value=7 Score=31.58 Aligned_cols=33 Identities=18% Similarity=0.109 Sum_probs=29.1
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
+..+|+|..+++|..+++.++.-+..+++..|+
T Consensus 45 ~~~~vLD~~sasG~rsiRya~E~~~~~V~~nDi 77 (375)
T d2dula1 45 NPKIVLDALSATGIRGIRFALETPAEEVWLNDI 77 (375)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEES
T ss_pred CCCEEEEcCCCccHHHHHHHHhCCCCEEEEecC
Confidence 357899999999999999999888778888886
No 204
>d2v9va2 a.4.5.35 (A:438-510) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=51.75 E-value=5.7 Score=23.97 Aligned_cols=44 Identities=11% Similarity=0.120 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHc--CCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 50 QPMTLTQIIVAL--NVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 50 ~p~t~~eLA~~~--g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
.+++.++|-.++ ++++ +....+|..|+..|.+...+ +.++++..
T Consensus 25 ~G~~keeLr~~l~~~~~~---~~f~~lL~~l~~~g~l~~~g--------~~v~L~~f 70 (73)
T d2v9va2 25 PGLAREELRSRYFSRLPA---RVYQALLEEWSREGRLQLAA--------NTVALAGF 70 (73)
T ss_dssp SCEEHHHHHHHHCTTSCH---HHHHHHHHHHHHTTSEEECS--------SEEEETTC
T ss_pred cCCCHHHHHHHhcccCCH---HHHHHHHHHHHHCCChheeC--------CEEECCCC
Confidence 679999999999 5677 89999999999999999884 67776655
No 205
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.16 E-value=3.2 Score=32.32 Aligned_cols=49 Identities=8% Similarity=0.087 Sum_probs=39.4
Q ss_pred HHHhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 25 YNYMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 25 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
.+||....+....+ ..+.+|+++|+++|++.+ ..++..|-.+|++....
T Consensus 189 ~~YW~~~i~~~l~~---------~~~~isi~~is~~T~i~~------~Dii~tL~~l~~l~~~~ 237 (273)
T d1fy7a_ 189 RAYWSDTLITLLVE---------HQKEITIDEISSMTSMTT------TDILHTAKTLNILRYYK 237 (273)
T ss_dssp HHHHHHHHHHHHHH---------TCSEEEHHHHHHHHCBCH------HHHHHHHHHHTCEEEET
T ss_pred HHHHHHHHHHHHHh---------CCCCccHHHHHHhcCCCH------HHHHHHHHHCCCEEEEC
Confidence 37887777765433 225689999999999988 78899999999999885
No 206
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.34 E-value=8.9 Score=24.13 Aligned_cols=42 Identities=19% Similarity=0.165 Sum_probs=31.4
Q ss_pred HhHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHH
Q 040620 27 YMKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLA 79 (214)
Q Consensus 27 ~~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~ 79 (214)
.+...|++.|.+. . +-|.|..|||+.+++++ ..+.+..+.+.
T Consensus 46 ~i~AA~iY~acr~------~--~~p~t~~eIa~~~~i~~---~~i~k~~k~i~ 87 (95)
T d1vola1 46 AIASACLYIACRQ------E--GVPRTFKEICAVSRISK---KEIGRCFKLIL 87 (95)
T ss_dssp HHHHHHHHHHHHH------T--TCCCCHHHHHTTTCSCH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH------c--CCCCCHHHHHHHhCCCH---HHHHHHHHHHH
Confidence 3456677777654 2 38999999999999998 77777666554
No 207
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=50.12 E-value=3 Score=24.69 Aligned_cols=22 Identities=9% Similarity=0.214 Sum_probs=19.7
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
..+|..++|+++|+++ ..+.+|
T Consensus 13 ~g~tq~elA~~~gis~---~~is~~ 34 (66)
T d1utxa_ 13 KKISQSELAALLEVSR---QTINGI 34 (66)
T ss_dssp TTCCHHHHHHHHTSCH---HHHHHH
T ss_pred cCCCHHHHHHhcccCH---HHHHHH
Confidence 6799999999999998 777777
No 208
>d1u5ta2 a.4.5.54 (A:165-232) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=49.89 E-value=7.4 Score=23.56 Aligned_cols=36 Identities=6% Similarity=0.014 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
|-+|+..|-..+|-+. .+.+..|+.|+..|++=-+.
T Consensus 16 G~Vt~s~l~~~lgW~~---~Ra~~aLd~lv~eGl~WvD~ 51 (68)
T d1u5ta2 16 GYSSISLLKANLGWEA---VRSKSALDEMVANGLLWIDY 51 (68)
T ss_dssp SCCBHHHHHHHHCCCS---HHHHHHHHHHHHTTSSEEEC
T ss_pred CceeHHHHHHHhCCCH---HHHHHHHHHHHhcCcEEEec
Confidence 7899999999999999 99999999999999997765
No 209
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=49.87 E-value=4.4 Score=24.01 Aligned_cols=23 Identities=4% Similarity=0.131 Sum_probs=18.9
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
..+|.+|||+.+|+++ ..++..+
T Consensus 33 ~~~s~~eIA~~lgis~---~tv~~~l 55 (68)
T d1or7a1 33 DGLSYEEIAAIMDCPV---GTVRSRI 55 (68)
T ss_dssp TCCCHHHHHHHTTSCH---HHHHHHH
T ss_pred hCCCHHHHHHHHCcCH---HHHHHHH
Confidence 5789999999999998 6665544
No 210
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=48.23 E-value=4.1 Score=24.52 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=19.6
Q ss_pred hhhcCC-CCCCHHHHHHHcCCCCCCcccHH
Q 040620 44 IINNSG-QPMTLTQIIVALNVHPNKTRCTQ 72 (214)
Q Consensus 44 ~L~~~~-~p~t~~eLA~~~g~~~~~~~~l~ 72 (214)
++.+.| ...|+.+||+++|+++ ..+.
T Consensus 16 l~~~~G~~~~s~~~Ia~~agvs~---~t~Y 42 (74)
T d1v7ba1 16 YIGEYSLETLSYDSLAEATGLSK---SGLI 42 (74)
T ss_dssp HHHHSCSTTCCHHHHHHHHCSCH---HHHH
T ss_pred HHHHhCccccCHHHHHHHhCcCc---chHh
Confidence 344444 7799999999999987 5553
No 211
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=47.78 E-value=3.8 Score=24.30 Aligned_cols=22 Identities=9% Similarity=0.131 Sum_probs=19.8
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
..+|.++||+++|+++ ..+.+|
T Consensus 13 ~gltq~~la~~~gis~---~~i~~~ 34 (68)
T d1b0na2 13 KGYSLSELAEKAGVAK---SYLSSI 34 (68)
T ss_dssp TTCCHHHHHHHHTCCH---HHHHHH
T ss_pred cCCCHHHHHHHHCCCH---HHHHHH
Confidence 6799999999999998 888777
No 212
>d2esha1 a.4.5.61 (A:4-117) Hypothetical protein TM0937 {Thermotoga maritima [TaxId: 2336]}
Probab=47.72 E-value=8.3 Score=25.41 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=44.2
Q ss_pred cchhhhcCCCCCCHHHHHHHcC---CCC---CCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCCCcccccccc
Q 040620 41 IPDIINNSGQPMTLTQIIVALN---VHP---NKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPHLDFFSRISL 113 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g---~~~---~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~~~~~s~~l~ 113 (214)
|..+|.+ +|++--||.+.+. .+. ...-.+...|+-|...|+++......++..-..|.+|+. ++..+
T Consensus 15 iL~lL~~--~~~~GYei~~~i~~~~~~~~~~~~~gtiY~~L~rLe~~G~I~~~~~~~~g~~rk~Y~IT~~----G~~~l 87 (114)
T d2esha1 15 ILLLVAE--KPSHGYELAERLAEFGIEIPGIGHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQ----GKLYL 87 (114)
T ss_dssp HHHHHHH--SCBCHHHHHHHHHTTCCSSTTCCCCCCHHHHHHHHHHTTSEEEEEECSSSSCEEEEEECHH----HHHHH
T ss_pred HHHHHhc--CCccHHHHHHHHHHhcCCCcccCCCCcHHHHHHHHHHCCCeEEEeecCCCCCcEEEEECHH----HHHHH
Confidence 4456766 8999999988762 111 112689999999999999986543222221235888888 66543
No 213
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=47.46 E-value=3.4 Score=26.63 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=22.4
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILVCLLA 79 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlLr~L~ 79 (214)
..|.++||+++|.++ ..+...|+.|-
T Consensus 19 g~t~~~iA~~~Gks~---~~V~~~LrLl~ 44 (93)
T d1vz0a1 19 GLTQEEVARRVGKAR---STVANALRLLQ 44 (93)
T ss_dssp TCCHHHHHHHHTCCH---HHHHHHHHGGG
T ss_pred CCCHHHHHHHHccch---HHHHHHHHHHH
Confidence 479999999999998 88888887763
No 214
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=47.32 E-value=5.8 Score=29.52 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=26.2
Q ss_pred cCCCCcEEeecCCchHHHHH--HHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARA--IATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~--l~~~~P~l~~~v~Dl 212 (214)
..+.++|+=||+|.+-++.+ |+++ +.+++|+|-
T Consensus 27 ~~~pkkV~IIGaG~aGLsaA~~L~~~--G~~V~vlE~ 61 (370)
T d2iida1 27 TSNPKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEA 61 (370)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHH--TCEEEEECS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHC--CCCEEEEeC
Confidence 45678999999999987775 5555 789999984
No 215
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=47.30 E-value=6.1 Score=24.72 Aligned_cols=29 Identities=21% Similarity=0.151 Sum_probs=22.0
Q ss_pred CCCCCHHHHHHHcCC--CCCCcccHHHHHHHHHh
Q 040620 49 GQPMTLTQIIVALNV--HPNKTRCTQILVCLLAH 80 (214)
Q Consensus 49 ~~p~t~~eLA~~~g~--~~~~~~~l~rlLr~L~~ 80 (214)
+.|+|+++|++.++- ++ ..++..|..|..
T Consensus 20 ~~Pls~~~L~~~l~~~~~~---~~i~~~l~~L~~ 50 (85)
T d1t6sa1 20 EEPVNLQTLSQITAHKFTP---SELQEAVDELNR 50 (85)
T ss_dssp SSCBCHHHHHHHTTCCCCH---HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHccCCCH---HHHHHHHHHHHH
Confidence 389999999999974 44 567777766653
No 216
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=46.74 E-value=3.6 Score=24.18 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=20.0
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
..+|-+|+|+++|+++ ..+.+|
T Consensus 15 ~gltq~~lA~~~gvs~---~ti~~~ 36 (65)
T d2croa_ 15 LKMTQTELATKAGVKQ---QSIQLI 36 (65)
T ss_dssp TTCCHHHHHHHHTSCH---HHHHHH
T ss_pred cCCCHHHHHHHHCcCH---hHHHHH
Confidence 6799999999999998 888887
No 217
>d2ppxa1 a.35.1.3 (A:30-91) Uncharacterized protein Atu1735 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=46.25 E-value=4.2 Score=23.85 Aligned_cols=22 Identities=5% Similarity=-0.044 Sum_probs=20.0
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
-++|-+++|+.+|++. ..+.+|
T Consensus 11 ~gltQ~elA~~lGvs~---~tvs~~ 32 (62)
T d2ppxa1 11 LKLTQEEFSARYHIPL---GTLRDW 32 (62)
T ss_dssp TTCCHHHHHHHHTCCH---HHHHHH
T ss_pred cCCCHHHHHHHhCCCH---HHHHHH
Confidence 5799999999999998 888888
No 218
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=46.05 E-value=8.7 Score=31.15 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=24.5
Q ss_pred HHHHHhhcccccCCCCcEEeecCCchHHHHHHHHHC
Q 040620 167 ASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAF 202 (214)
Q Consensus 167 ~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~ 202 (214)
+..+++..+ .....+|+|-.||+|.++.+..++.
T Consensus 151 v~~mv~ll~--~~~~~~IlDPacGsG~fL~~a~~~~ 184 (425)
T d2okca1 151 IQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYM 184 (425)
T ss_dssp HHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHH
T ss_pred hHhhheecc--CcccceeeccccccCccHHHHHHHH
Confidence 344444444 3346799999999999999887754
No 219
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=45.72 E-value=4.2 Score=24.17 Aligned_cols=22 Identities=0% Similarity=-0.019 Sum_probs=19.7
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
..+|.+++|+++|+++ ..+.+|
T Consensus 21 ~gltq~~lA~~~gis~---~~i~~~ 42 (69)
T d1y7ya1 21 KGLSQETLAFLSGLDR---SYVGGV 42 (69)
T ss_dssp TTCCHHHHHHHHTCCH---HHHHHH
T ss_pred cCCCHHHHHhHhCCCH---HHHHHH
Confidence 6799999999999998 787777
No 220
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=45.43 E-value=3.2 Score=27.54 Aligned_cols=26 Identities=19% Similarity=0.130 Sum_probs=21.5
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILVCLLA 79 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlLr~L~ 79 (214)
+.|.++||+++|.++ ..+.+.|+++-
T Consensus 30 g~s~~eiA~~~G~s~---~~V~~~l~L~~ 55 (114)
T d1r71a_ 30 GKKKGDIAKEIGKSP---AFITQHVTLLD 55 (114)
T ss_dssp TCCHHHHHHHHTCCH---HHHHHHHGGGS
T ss_pred CCCHHHHHHHHCCcH---HHHHHHHHHhC
Confidence 469999999999998 88888776553
No 221
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=45.33 E-value=4.5 Score=24.63 Aligned_cols=22 Identities=9% Similarity=0.043 Sum_probs=19.8
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
..+|.++||+++|+++ ..+.+|
T Consensus 20 ~g~sq~~lA~~~gis~---~~i~~~ 41 (79)
T d1y9qa1 20 RGLSLDATAQLTGVSK---AMLGQI 41 (79)
T ss_dssp TTCCHHHHHHHHSSCH---HHHHHH
T ss_pred cCCCHHHHHHHHCcch---hHHHHH
Confidence 6799999999999998 888777
No 222
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=45.03 E-value=9.3 Score=23.44 Aligned_cols=41 Identities=10% Similarity=0.102 Sum_probs=30.3
Q ss_pred CCHHHHHHHc----C--CCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCC
Q 040620 52 MTLTQIIVAL----N--VHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPP 103 (214)
Q Consensus 52 ~t~~eLA~~~----g--~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~ 103 (214)
-+-.+|-.-+ | ++. ..+..+|+.|..+|++.+. ++.|..+.
T Consensus 19 ~rWs~IK~yle~~~G~~I~d---~~ls~lL~nL~k~~~iek~--------~~~Y~i~D 65 (73)
T d2fnaa1 19 GKWSDVKRALELEEGIEISD---SEIYNYLTQLTKHSWIIKE--------GEKYCPSE 65 (73)
T ss_dssp BCHHHHHHHHHHHHCSCCCH---HHHHHHHHHHHHTTSEEES--------SSCEEESS
T ss_pred CcHHHHHHHHHHHcCCCCCh---HHHHHHHHHHHHcCceeec--------CCeeccCc
Confidence 3566665433 5 565 7999999999999999987 46777653
No 223
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.72 E-value=11 Score=26.04 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=27.1
Q ss_pred cCCCCcEEeecCC-chHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGS-TGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG-~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.....+|+-+|+| .|.++.++++.+ ..++++.|.
T Consensus 25 ~~~g~~vlI~GaG~vG~~a~q~ak~~-G~~vi~~~~ 59 (168)
T d1piwa2 25 CGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISR 59 (168)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEES
T ss_pred cCCCCEEEEECCCCcchhHHHHhhhc-ccccccccc
Confidence 5567788889887 788888888864 789888875
No 224
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.29 E-value=9.8 Score=29.05 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=26.5
Q ss_pred CcEEeecCCchHHHHH--HHHHCCCCeEEEecCC
Q 040620 182 KPLVDVGGSTGTMARA--IATAFPDTKCTVFACH 213 (214)
Q Consensus 182 ~~vvDVGGG~G~~~~~--l~~~~P~l~~~v~Dlp 213 (214)
..|+=||||+..++.+ ++++.|+.+++++|..
T Consensus 51 ~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~ 84 (311)
T d2gjca1 51 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 84 (311)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEcC
Confidence 4689999999887754 7777999999999863
No 225
>d1k78a1 a.4.1.5 (A:19-81) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.82 E-value=5 Score=23.99 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=31.7
Q ss_pred HhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCc
Q 040620 37 IQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGF 83 (214)
Q Consensus 37 ~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~ 83 (214)
.+-.|.++.. +.++..++|+++++++ ..+.+|+.--..-|-
T Consensus 19 LR~Riv~~~~---~G~s~r~aA~rf~VS~---s~v~k~l~r~reTG~ 59 (63)
T d1k78a1 19 VRQRIVELAH---QGVRPCDISRQLRVSH---GCVSKILGRYYETGS 59 (63)
T ss_dssp HHHHHHHHHH---TTCCHHHHHHHHTCCH---HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHH---cCCCHHHHHHHhCCCH---HHHHHHHHHHHHhcC
Confidence 3445666665 4699999999999999 999999987665543
No 226
>d1ku2a1 a.4.13.1 (A:273-332) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=43.57 E-value=3.9 Score=24.09 Aligned_cols=26 Identities=8% Similarity=-0.014 Sum_probs=17.8
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
..-|.+|||+++|++- ....++.+++
T Consensus 27 RePt~eEiA~~l~~~l-~~ekV~~~l~ 52 (60)
T d1ku2a1 27 REPSYEEIAEAMGPGW-DAKRVEETLK 52 (60)
T ss_dssp SCCCHHHHHHHHCSSC-CHHHHHHHGG
T ss_pred CCCCHHHHHHHHCCCC-CHHHHHHHHH
Confidence 4569999999998652 0046666654
No 227
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}
Probab=43.57 E-value=19 Score=24.11 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=34.7
Q ss_pred HHHHhhhhhhhhHHHHHhhcccccCCCCcEEeecCCchHHHHHHHHHCCC--CeEEEecCC
Q 040620 155 FYEAMITDFELIASVLIEDCNEVSKGLKPLVDVGGSTGTMARAIATAFPD--TKCTVFACH 213 (214)
Q Consensus 155 f~~am~~~~~~~~~~~l~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~--l~~~v~Dlp 213 (214)
..+.+....+...+.+...+. .......++=+|||+-.+--.+.+.++. .++.+.|=|
T Consensus 91 i~~~i~~~~~~i~~~i~~~~~-~~~~~~~iil~GGGs~ll~~~lk~~~~~~~~~v~i~~~P 150 (163)
T d2zgya2 91 VTEAMNEALRKLEQRVLNTLN-EFSGYTHVMVIGGGAELICDAVKKHTQIRDERFFKTNNS 150 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCCCCEEEEESTTHHHHHHHHHHTSCCCGGGEECCSCG
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cccccceEEEECchHHHHHHHHHHHhCCCCCCeEECCCc
Confidence 334444443333344444332 3456678999999986655667777754 467777766
No 228
>d2cuja1 a.4.1.18 (A:8-108) Transcriptional adaptor 2-like, TADA2L {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.36 E-value=8 Score=25.23 Aligned_cols=55 Identities=9% Similarity=0.083 Sum_probs=40.5
Q ss_pred hHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceee
Q 040620 28 MKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQ 86 (214)
Q Consensus 28 ~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~ 86 (214)
-.....|..++--|+...... +..+..+--+.+++|+ ....|+.++++..|.+.+
T Consensus 46 rL~P~~YL~~K~~l~~E~~k~-g~l~k~da~~~~kiD~---~K~~rIydfl~~~GWi~~ 100 (101)
T d2cuja1 46 RLVPGAYLEYKSALLNECHKQ-GGLRLAQARALIKIDV---NKTRKIYDFLIREGYITK 100 (101)
T ss_dssp TCCHHHHHHHHHHHHHHHHHS-SCCCHHHHHHHHTSCH---HHHHHHHHHHHTTTSSCC
T ss_pred CCChHHHHHHHHHHHHHHHHc-CCCcHHHHHHHhcccH---HHHHHHHHHHHHccCccc
Confidence 334444555555555333343 7889999888899999 999999999999998864
No 229
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=43.35 E-value=4.4 Score=23.79 Aligned_cols=23 Identities=4% Similarity=-0.100 Sum_probs=20.1
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
.++|..++|+++|+++ ..+.+|.
T Consensus 15 ~g~tq~~lA~~~gvs~---~~i~~~e 37 (66)
T d2r1jl1 15 LKIRQAALGKMVGVSN---VAISQWE 37 (66)
T ss_dssp HTCCHHHHHHHHTSCH---HHHHHHH
T ss_pred cCCCHHHHHHHHCCCH---HHHHHHH
Confidence 5789999999999998 8887773
No 230
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=43.28 E-value=4.4 Score=23.52 Aligned_cols=22 Identities=5% Similarity=0.114 Sum_probs=19.9
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
..+|.+|+|+++|+++ ..+.+|
T Consensus 13 ~g~sq~elA~~~gvs~---~~is~~ 34 (63)
T d1r69a_ 13 LGLNQAELAQKVGTTQ---QSIEQL 34 (63)
T ss_dssp TTCCHHHHHHHHTSCH---HHHHHH
T ss_pred cCCcHHHHHHHhCcCH---HHHHHH
Confidence 6799999999999998 888877
No 231
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}
Probab=42.92 E-value=15 Score=26.21 Aligned_cols=34 Identities=29% Similarity=0.294 Sum_probs=29.3
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...++|+=||||+.-+..++.-+.-..++++||.
T Consensus 41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~ 74 (179)
T d1ps9a3 41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDA 74 (179)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCcEEEEECccHHHHHHHHHHHhhccceEEEec
Confidence 4568999999999998888877777889999985
No 232
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=42.72 E-value=16 Score=22.77 Aligned_cols=41 Identities=17% Similarity=0.058 Sum_probs=29.0
Q ss_pred hHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHH
Q 040620 28 MKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLA 79 (214)
Q Consensus 28 ~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~ 79 (214)
+...|++.+.+. ++.+.|..|||+.+|+++ ..+++..+.|.
T Consensus 45 vaAA~iY~a~r~--------~~~~~t~~eIa~~~~vs~---~tI~~~yk~l~ 85 (95)
T d1aisb2 45 LVAAALYIASLL--------EGEKRTQREVAEVARVTE---VTVRNRYKELV 85 (95)
T ss_dssp HHHHHHHHHHHH--------TTCCCCHHHHHHHHTCCH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--------cCCCcCHHHHHHHHCCCH---HHHHHHHHHHH
Confidence 355566666543 237899999999999998 66666655443
No 233
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=42.71 E-value=5.9 Score=26.10 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=18.8
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
..+|.+|||+.+|+++ ..++..+
T Consensus 31 ~~ls~~EIA~~lgiS~---~aV~~~l 53 (106)
T d1s7oa_ 31 DDYSLAEIADEFGVSR---QAVYDNI 53 (106)
T ss_dssp TCCCHHHHHHHHTCCH---HHHHHHH
T ss_pred cCCCHHHHHHHHCcCH---HHHHHHH
Confidence 5689999999999998 6665544
No 234
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=42.70 E-value=4.6 Score=24.07 Aligned_cols=21 Identities=10% Similarity=-0.047 Sum_probs=17.2
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
..+|+++||+++|+++ ..+.+
T Consensus 20 ~~~s~~~Ia~~agvs~---~~~y~ 40 (71)
T d1jt6a1 20 NATTTGEIVKLSESSK---GNLYY 40 (71)
T ss_dssp TTCCHHHHHHHTTCCH---HHHHH
T ss_pred cccCHHHHHHHHCcCH---hHHHH
Confidence 6799999999999987 55543
No 235
>d1xmaa_ a.4.5.61 (A:) Predicted transcriptional regulator {Clostridium thermocellum [TaxId: 1515]}
Probab=42.55 E-value=2.1 Score=28.04 Aligned_cols=63 Identities=8% Similarity=0.055 Sum_probs=42.4
Q ss_pred cchhhhcCCCCCCHHHHHHHc--------CCCCCCcccHHHHHHHHHhCCceeeecCCCCC-CccceeeCCCCCcccccc
Q 040620 41 IPDIINNSGQPMTLTQIIVAL--------NVHPNKTRCTQILVCLLAHSGFFVQQKDGKNE-QEEESILLPPHLDFFSRI 111 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~--------g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~-~~~~~y~~t~~~~~~s~~ 111 (214)
|+.+|.+ +|++--||.+.+ ++++ -.+...|+-|...|++.......++ .....|.+|+. ++.
T Consensus 12 IL~lL~~--~~~~GYei~~~l~~~~~~~~~is~---gslY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~iT~~----G~~ 82 (103)
T d1xmaa_ 12 ILSLLIE--GDSYGYEISKNIRIKTDELYVIKE---TTLYSAFARLEKNGYIKSYYGEETQGKRRTYYRITPE----GIK 82 (103)
T ss_dssp HHHHHHH--CCEEHHHHHHHHHHHHTTSCCCCH---HHHHHHHHHHHHTTSEEEEEEEEC--CEEEEEEECHH----HHH
T ss_pred HHHHHhh--CCccHHHHHHHHHHHcCCeecCCC---CchHHHHHHHHHCCCeEEEeeccCCCCCceEEEECHH----HHH
Confidence 3445655 788888888865 3566 8999999999999999843211011 11124899988 665
Q ss_pred c
Q 040620 112 S 112 (214)
Q Consensus 112 l 112 (214)
.
T Consensus 83 ~ 83 (103)
T d1xmaa_ 83 Y 83 (103)
T ss_dssp H
T ss_pred H
Confidence 4
No 236
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=41.96 E-value=37 Score=22.90 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=26.4
Q ss_pred cCCCCcEEeecCC-chHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGS-TGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG-~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.....+|+-+|+| .|.++.++++.+. .++++.|.
T Consensus 24 ~~~g~~vlV~G~G~vG~~~~~~ak~~G-a~vi~v~~ 58 (170)
T d1e3ja2 24 VQLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTAR 58 (170)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCCEEEEEcccccchhhHhhHhhhc-ccccccch
Confidence 4556788888866 7888889998865 69888875
No 237
>d1y0pa3 d.168.1.1 (A:362-504) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}
Probab=41.79 E-value=4.8 Score=27.70 Aligned_cols=23 Identities=9% Similarity=0.024 Sum_probs=18.6
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.-|++|||+++|+++ ..|.+-++
T Consensus 83 adtleeLA~~~gid~---~~L~~Tv~ 105 (143)
T d1y0pa3 83 ADSLVKLGKMEGIDG---KALTETVA 105 (143)
T ss_dssp ESSHHHHHHHHTSCH---HHHHHHHH
T ss_pred cCcHHHHHHHhCCCH---HHHHHHHH
Confidence 349999999999999 77666554
No 238
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=41.30 E-value=4.5 Score=24.42 Aligned_cols=21 Identities=10% Similarity=0.129 Sum_probs=17.4
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
..+|+.+||+++|+++ ..+.+
T Consensus 23 ~~~si~~Ia~~agvs~---~~~Y~ 43 (73)
T d2fx0a1 23 EGTSIQEIAKEAKVNV---AMASY 43 (73)
T ss_dssp TTCCHHHHHHHHTSCH---HHHHH
T ss_pred ccCcHHHHHHHHCcCh---hHHHH
Confidence 6799999999999987 55543
No 239
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=41.03 E-value=5.1 Score=23.83 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=19.7
Q ss_pred hhhcCC-CCCCHHHHHHHcCCCCCCcccHHH
Q 040620 44 IINNSG-QPMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 44 ~L~~~~-~p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
++.+.| ...|..+||+++|+++ ..+++
T Consensus 16 l~~~~G~~~~t~~~Ia~~agvs~---~~~y~ 43 (69)
T d2fq4a1 16 LLLESGFKAVTVDKIAERAKVSK---ATIYK 43 (69)
T ss_dssp HHHHHCTTTCCHHHHHHHHTCCH---HHHHH
T ss_pred HHHHhCcccCCHHHHHHHHCcCH---HHHHH
Confidence 344433 5689999999999987 65544
No 240
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=40.89 E-value=5 Score=24.05 Aligned_cols=27 Identities=19% Similarity=0.095 Sum_probs=19.6
Q ss_pred hhhcCC-CCCCHHHHHHHcCCCCCCcccHHH
Q 040620 44 IINNSG-QPMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 44 ~L~~~~-~p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
++.+.| ..+|..+||+++|+++ ..+++
T Consensus 16 l~~~~G~~~~ti~~Ia~~agvs~---~t~y~ 43 (72)
T d1pb6a1 16 TFSQFGFHGTRLEQIAELAGVSK---TNLLY 43 (72)
T ss_dssp HHHHHCTTTCCHHHHHHHTTSCH---HHHHH
T ss_pred HHHHhCccccCHHHHHHHhCCCh---HHHHH
Confidence 344433 6799999999999987 55533
No 241
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=40.73 E-value=5.5 Score=24.05 Aligned_cols=22 Identities=5% Similarity=0.078 Sum_probs=19.7
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
..+|.+++|+++|+++ ..+.+|
T Consensus 22 ~gltq~~lA~~~gis~---~~i~~~ 43 (77)
T d2b5aa1 22 KGVSQEELADLAGLHR---TYISEV 43 (77)
T ss_dssp TTCCHHHHHHHHTCCH---HHHHHH
T ss_pred cCCCHHHHHHHHCCCH---HHHHHH
Confidence 6799999999999998 888777
No 242
>d2g7ga1 a.4.1.9 (A:9-73) Putative transcriptional regulator Rha04620 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=40.26 E-value=3.4 Score=24.50 Aligned_cols=21 Identities=14% Similarity=0.354 Sum_probs=16.9
Q ss_pred hhhcCCCCCCHHHHHHHcCCCC
Q 040620 44 IINNSGQPMTLTQIIVALNVHP 65 (214)
Q Consensus 44 ~L~~~~~p~t~~eLA~~~g~~~ 65 (214)
++.+. |..|..+||+++|+++
T Consensus 13 l~~~~-G~~ti~~Ia~~agvs~ 33 (65)
T d2g7ga1 13 LVDRD-GDFRMPDLARHLNVQV 33 (65)
T ss_dssp HHHHH-SSCCHHHHHHHTTSCH
T ss_pred HHHHc-CCCCHHHHHHHhCccc
Confidence 44444 4799999999999987
No 243
>d1d4ca3 d.168.1.1 (A:360-505) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}
Probab=40.07 E-value=5.4 Score=27.45 Aligned_cols=23 Identities=13% Similarity=0.089 Sum_probs=18.9
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.-|++|||+++|+++ ..|..-+.
T Consensus 84 a~TleeLA~~~gid~---~~L~~Tv~ 106 (146)
T d1d4ca3 84 GKTIEELAKQIDVPA---AELAKTVT 106 (146)
T ss_dssp ESSHHHHHHHHTCCH---HHHHHHHH
T ss_pred cCCHHHHHHHhCCCH---HHHHHHHH
Confidence 469999999999998 77766653
No 244
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}
Probab=39.75 E-value=20 Score=25.03 Aligned_cols=36 Identities=8% Similarity=-0.101 Sum_probs=29.8
Q ss_pred cCCCCcEEeecCCc-hHHHHHHHHHCCCCeEEEecCC
Q 040620 178 SKGLKPLVDVGGST-GTMARAIATAFPDTKCTVFACH 213 (214)
Q Consensus 178 ~~~~~~vvDVGGG~-G~~~~~l~~~~P~l~~~v~Dlp 213 (214)
.+...+|+=+|+|. |.++.++++..--.++++.|..
T Consensus 26 v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~ 62 (174)
T d1e3ia2 26 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 62 (174)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccc
Confidence 55677888899887 9999999999877778888764
No 245
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=39.45 E-value=6.1 Score=24.61 Aligned_cols=21 Identities=5% Similarity=0.178 Sum_probs=18.7
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
.+|.+|||+++|+++ ..+.+|
T Consensus 25 ~~t~~eLA~~~Gvs~---~~ls~i 45 (82)
T d2ofya1 25 DMSMVTVAFDAGISV---ETLRKI 45 (82)
T ss_dssp TSCHHHHHHHHTCCH---HHHHHH
T ss_pred cCCHHHHHHHHcCCH---HHHHHH
Confidence 479999999999998 888877
No 246
>d1y0ua_ a.4.5.5 (A:) Putative arsenical resistance operon repressor AF0168 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=39.11 E-value=38 Score=20.76 Aligned_cols=54 Identities=13% Similarity=0.295 Sum_probs=40.6
Q ss_pred HhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 37 IQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 37 ~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
++-.++..|. .+.+-+||-++++++. ..++=-|..|. .||..+.. ++.|..|..
T Consensus 32 vRrkiLrmi~---kgrsedEIm~~l~LSk---kqldYHLk~LE-~GfciErv-------ge~w~~T~~ 85 (89)
T d1y0ua_ 32 VRRKILRMLD---KGRSEEEIMQTLSLSK---KQLDYHLKVLE-AGFCIERV-------GERWVVTDA 85 (89)
T ss_dssp HHHHHHHHHH---TTCCHHHHHHHHTCCH---HHHHHHHHHHH-HTTSEEEE-------TTEEEECTT
T ss_pred HHHHHHHHHH---ccCCHHHHHHHhccCH---HHHHHHHHHHH-ccceeEec-------CCceeeccc
Confidence 4444556666 5789999999999998 77776666665 57776665 689998887
No 247
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.11 E-value=4.8 Score=24.31 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=27.6
Q ss_pred HhcCcchhhhcCCCC-CCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 37 IQLRIPDIINNSGQP-MTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 37 ~~lglfd~L~~~~~p-~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
-++.|...+.. || ++-.+||...|+++ .-|..||+
T Consensus 12 eK~~ii~~~e~--g~k~sq~eIA~~fGv~~---STvs~IlK 47 (66)
T d1hlva1 12 EKSRIIQEVEE--NPDLRKGEIARRFNIPP---STLSTILK 47 (66)
T ss_dssp HHHHHHHHHHH--CTTSCHHHHHHHHTCCH---HHHHHHHH
T ss_pred HHHHHHHHHHc--CCcchHHHHHHHhCCCh---hHHHHHHH
Confidence 45566777777 55 68899999999998 88888874
No 248
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=38.80 E-value=6.8 Score=23.35 Aligned_cols=22 Identities=18% Similarity=0.280 Sum_probs=17.5
Q ss_pred hhhcCC-CCCCHHHHHHHcCCCC
Q 040620 44 IINNSG-QPMTLTQIIVALNVHP 65 (214)
Q Consensus 44 ~L~~~~-~p~t~~eLA~~~g~~~ 65 (214)
++.+.| ..+|+.+||+++|+++
T Consensus 17 l~~~~G~~~~t~~~Ia~~agvs~ 39 (75)
T d3c07a1 17 LFQERGYDRTTMRAIAQEAGVSV 39 (75)
T ss_dssp HHHHTCSTTCCHHHHHHHHTSCH
T ss_pred HHHHhCcccCCHHHHHHHHCcCH
Confidence 344444 6799999999999987
No 249
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=38.77 E-value=12 Score=29.64 Aligned_cols=23 Identities=26% Similarity=0.390 Sum_probs=19.0
Q ss_pred CCCcEEeecCCchHHHHHHHHHC
Q 040620 180 GLKPLVDVGGSTGTMARAIATAF 202 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~ 202 (214)
+.-.||++|+|+|.++..+++..
T Consensus 79 ~~~~ivE~GaG~G~La~dil~~l 101 (365)
T d1zkda1 79 QTLRLIEIGPGRGTMMADALRAL 101 (365)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHH
T ss_pred ccceEEecCCcccHHHHhhhhhh
Confidence 44589999999999998887653
No 250
>d1p4wa_ a.4.6.2 (A:) Transcriptional regulator RcsB {Erwinia amylovora [TaxId: 552]}
Probab=38.57 E-value=4.6 Score=25.44 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=24.8
Q ss_pred HhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 37 IQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 37 ~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
-|..|+.+|. .+++..|||+.+++++ +.+...++
T Consensus 26 rE~~vl~ll~---~G~s~~eIA~~l~iS~---~TV~~~~~ 59 (87)
T d1p4wa_ 26 KESEVLRLFA---EGFLVTEIAKKLNRSI---KTISSQKK 59 (87)
T ss_dssp HHHHHHHHHH---HTCCHHHHHHHHTSCH---HHHHHHHH
T ss_pred HHHHHHHHHH---cCCCHHHHHHHhCCCH---HHHHHHHH
Confidence 3455667777 4689999999999988 66654443
No 251
>d2o38a1 a.35.1.13 (A:28-116) Hypothetical protein RPA3824 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=38.31 E-value=5.5 Score=25.09 Aligned_cols=29 Identities=10% Similarity=0.224 Sum_probs=21.6
Q ss_pred cchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 41 IPDIINNSGQPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
|-.+... .++|-.++|+++|++. ..+.+|
T Consensus 16 i~~~r~~--~gltq~~lA~~~gis~---~~is~i 44 (89)
T d2o38a1 16 LNAVIDR--ARLSQAAAAARLGINQ---PKVSAL 44 (89)
T ss_dssp HHHHHHH--TTCCHHHHHHHHTCCH---HHHHHH
T ss_pred HHHHHHH--cCCCHHHHHHHHHhhH---hHHHHH
Confidence 4445555 7899999999999987 555555
No 252
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=37.87 E-value=5.5 Score=24.18 Aligned_cols=21 Identities=14% Similarity=0.094 Sum_probs=17.2
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
..+|+.+||+++|+++ ..+++
T Consensus 23 ~~~ti~~Ia~~agvs~---~s~y~ 43 (79)
T d2fbqa1 23 AETSLRLITSKAGVNL---AAVNY 43 (79)
T ss_dssp TTCCHHHHHHHHTSCH---HHHHH
T ss_pred ccccHHHHHHHHCcCh---hHHHH
Confidence 6799999999999987 55543
No 253
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=36.95 E-value=15 Score=26.65 Aligned_cols=34 Identities=12% Similarity=0.021 Sum_probs=27.7
Q ss_pred CCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 179 KGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
...++|+=||||..-+..+..-+..+.+++++|.
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~ 80 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDT 80 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHhccceeeEee
Confidence 4568999999999998887755556889999884
No 254
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=36.64 E-value=4.6 Score=23.86 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=17.6
Q ss_pred hhhhcCC-CCCCHHHHHHHcCCCC
Q 040620 43 DIINNSG-QPMTLTQIIVALNVHP 65 (214)
Q Consensus 43 d~L~~~~-~p~t~~eLA~~~g~~~ 65 (214)
+++.+.| ..+|+.+||+++|+++
T Consensus 12 ~l~~~~G~~~~ti~~Ia~~agvs~ 35 (69)
T d2np5a1 12 DVAAESGLEGASVREVAKRAGVSI 35 (69)
T ss_dssp HHHHHHCGGGCCHHHHHHHHTCCH
T ss_pred HHHHHhCccccCHHHHHHHhCCCH
Confidence 3444433 6799999999999987
No 255
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=36.63 E-value=6.2 Score=23.29 Aligned_cols=20 Identities=10% Similarity=-0.087 Sum_probs=16.8
Q ss_pred CCCCHHHHHHHcCCCCCCcccHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQ 72 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~ 72 (214)
..+|+.+||+++|+++ ..+.
T Consensus 19 ~~~si~~Ia~~agvs~---~t~Y 38 (70)
T d2gena1 19 DATTIEMIRDRSGASI---GSLY 38 (70)
T ss_dssp TTCCHHHHHHHHCCCH---HHHH
T ss_pred ccCCHHHHHHHHCcCH---HHHH
Confidence 6799999999999987 5553
No 256
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=36.34 E-value=3.6 Score=24.50 Aligned_cols=16 Identities=19% Similarity=0.463 Sum_probs=14.6
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
..+|+.+||+++|+++
T Consensus 23 ~~~si~~ia~~~gvs~ 38 (68)
T d2g7la1 23 EKVTMRRLAQELDTGP 38 (68)
T ss_dssp SSCCHHHHHHHTTSCH
T ss_pred ccCCHHHHHHHHCcCH
Confidence 6799999999999976
No 257
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.01 E-value=7.8 Score=22.53 Aligned_cols=23 Identities=17% Similarity=0.029 Sum_probs=19.4
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
....++||+.+|+++ +.+..|.+
T Consensus 29 ~~~~~~LA~~lgls~---~qV~~WFq 51 (59)
T d2cqxa1 29 EKRLKGLSKQLDWSV---RKIQCWFR 51 (59)
T ss_dssp HHHHHHHHHHTTCCH---HHHHHHHH
T ss_pred HHHHHHHHHHHCcCH---HHHHHHHH
Confidence 356788999999999 99988865
No 258
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=35.80 E-value=6.8 Score=23.13 Aligned_cols=20 Identities=20% Similarity=0.378 Sum_probs=16.8
Q ss_pred CCCCHHHHHHHcCCCCCCcccHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQ 72 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~ 72 (214)
..+|..+||+++|+++ ..+.
T Consensus 19 ~~~ti~~Ia~~agvs~---~~~Y 38 (69)
T d2i10a1 19 EGTSITDLTKALGINP---PSLY 38 (69)
T ss_dssp TTCCHHHHHHHHTCCH---HHHH
T ss_pred ccCCHHHHHHHhCCCh---hHHH
Confidence 6799999999999987 5553
No 259
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=35.50 E-value=9.8 Score=22.52 Aligned_cols=16 Identities=19% Similarity=0.191 Sum_probs=14.8
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
..+|+.+||+++|+++
T Consensus 21 ~~~si~~Ia~~agvs~ 36 (73)
T d1sgma1 21 HATGLNQIVKESGAPK 36 (73)
T ss_dssp TTCCHHHHHHHHCCCS
T ss_pred ccCCHHHHHHHhCCCH
Confidence 6799999999999987
No 260
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=35.21 E-value=6.5 Score=23.34 Aligned_cols=22 Identities=0% Similarity=0.225 Sum_probs=17.2
Q ss_pred hhhcCC-CCCCHHHHHHHcCCCC
Q 040620 44 IINNSG-QPMTLTQIIVALNVHP 65 (214)
Q Consensus 44 ~L~~~~-~p~t~~eLA~~~g~~~ 65 (214)
++.+.| ..+|+.+||+++|+++
T Consensus 15 l~~~~G~~~~t~~~Ia~~agvs~ 37 (73)
T d1t56a1 15 LLEDRPLADISVDDLAKGAGISR 37 (73)
T ss_dssp HHHHSCGGGCCHHHHHHHHTCCH
T ss_pred HHHHhCcccCCHHHHHHHhCCCH
Confidence 444443 5699999999999987
No 261
>d1ufma_ a.4.5.47 (A:) COP9 signalosome complex subunit 4, GSN4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.13 E-value=8.1 Score=24.17 Aligned_cols=35 Identities=9% Similarity=0.117 Sum_probs=31.0
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
..++++.||+.+++++ ..+..++.-+...|-+...
T Consensus 29 ~~Isl~~la~~l~l~~---~evE~~l~~mI~~~~i~ak 63 (84)
T d1ufma_ 29 NNITFEELGALLEIPA---AKAEKIASQMITEGRMNGF 63 (84)
T ss_dssp SEEEHHHHHHHTTSCH---HHHHHHHHHHHHTTSSCEE
T ss_pred ceeeHHHHHHHHCCCH---HHHHHHHHHHHhcCeEEEE
Confidence 4578999999999998 9999999999999988643
No 262
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=34.93 E-value=5.1 Score=24.07 Aligned_cols=21 Identities=5% Similarity=0.151 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
..+|..+||+++|+++ ..+.+
T Consensus 23 ~~~s~~~Ia~~agvs~---~~iY~ 43 (74)
T d2g7sa1 23 NSFSYADISQVVGIRN---ASIHH 43 (74)
T ss_dssp GGCCHHHHHHHHCCCH---HHHHH
T ss_pred cccCHHHHHHHHCcCc---chHHH
Confidence 5689999999999987 55533
No 263
>d2auwa1 a.35.1.10 (A:88-154) Hypothetical protein NE0471 C-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=34.42 E-value=6.4 Score=23.71 Aligned_cols=22 Identities=23% Similarity=0.292 Sum_probs=19.2
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
.++|-.++|+++|++. +.+.+|
T Consensus 13 ~gltQ~elA~~LGvs~---~ti~~y 34 (67)
T d2auwa1 13 NNLSLTTAAEALGISR---RMVSYY 34 (67)
T ss_dssp TTCCHHHHHHHHTSCH---HHHHHH
T ss_pred cCCCHHHHHHHhCCCH---HHHHHH
Confidence 6799999999999998 777666
No 264
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Probab=33.73 E-value=11 Score=24.79 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=18.6
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
..+|..|||+.+|+++ ..++..+
T Consensus 33 e~ls~~EIA~~lgiS~---~aV~~~l 55 (106)
T d1xsva_ 33 EDYSLSEIADTFNVSR---QAVYDNI 55 (106)
T ss_dssp SCCCHHHHHHHTTCCH---HHHHHHH
T ss_pred hCCcHHHHHHHHCcCH---HHHHHHH
Confidence 5799999999999998 6665444
No 265
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Probab=33.17 E-value=16 Score=27.09 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=25.0
Q ss_pred cEEeecCCchHHHHHHH-HHCCCCeEEEecC
Q 040620 183 PLVDVGGSTGTMARAIA-TAFPDTKCTVFAC 212 (214)
Q Consensus 183 ~vvDVGGG~G~~~~~l~-~~~P~l~~~v~Dl 212 (214)
-|+=||+|.+-+..++. .+.++++++++|.
T Consensus 35 DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~ 65 (278)
T d1rp0a1 35 DVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 65 (278)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTSCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHccCCeEEEEec
Confidence 48889999999888764 4578999999995
No 266
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=33.03 E-value=8.1 Score=22.91 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=14.8
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
..+|+++||+++|+++
T Consensus 24 ~~~si~~Ia~~agvs~ 39 (71)
T d1ui5a1 24 ESTTLSEIVAHAGVTK 39 (71)
T ss_dssp TTCCHHHHHHHHTCCH
T ss_pred cccCHHHHHHHHCcCH
Confidence 6799999999999987
No 267
>d1pdnc_ a.4.1.5 (C:) Paired protein (prd) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=32.64 E-value=8.5 Score=25.81 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=36.8
Q ss_pred HhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 37 IQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 37 ~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
.+..|.++.. .+++..+||+.+++++ ..+.+|+.-...-|-+.-.
T Consensus 21 lR~rIv~~~~---~G~s~r~iA~~~~VS~---~tV~k~l~r~~~~G~~~~~ 65 (123)
T d1pdnc_ 21 IRLKIVEMAA---DGIRPCVISRQLRVSH---GCVSKILNRYQETGSIRPG 65 (123)
T ss_dssp HHHHHHHHHH---TTCCHHHHHHHHTCCH---HHHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHH---hcCCHHHHHHHHCcCH---HHHHHHHHHHHccCCcCcC
Confidence 3445666655 5689999999999999 9999999999998887644
No 268
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=32.48 E-value=5.6 Score=24.03 Aligned_cols=16 Identities=6% Similarity=-0.020 Sum_probs=14.7
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
..+|..+||+++|+++
T Consensus 25 ~~~s~~~Ia~~agvs~ 40 (77)
T d2gfna1 25 SAVTTRAVAEESGWST 40 (77)
T ss_dssp GGCCHHHHHHHHSSCH
T ss_pred cccCHHHHHHHHCCCH
Confidence 5799999999999987
No 269
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.00 E-value=7.6 Score=23.26 Aligned_cols=16 Identities=6% Similarity=0.067 Sum_probs=14.7
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
...|+.+||+++|++.
T Consensus 26 ~~~si~~Ia~~agvs~ 41 (76)
T d2fd5a1 26 VEPSVGEVMGAAGLTV 41 (76)
T ss_dssp TSCCHHHHHHHTTCCG
T ss_pred ccccHHHHHHHhCCCc
Confidence 5699999999999987
No 270
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]}
Probab=31.76 E-value=21 Score=28.50 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=24.3
Q ss_pred CCCCcEEeecCCchHHH-------H-HHHHH--------CCCCeEEEecCCC
Q 040620 179 KGLKPLVDVGGSTGTMA-------R-AIATA--------FPDTKCTVFACHL 214 (214)
Q Consensus 179 ~~~~~vvDVGGG~G~~~-------~-~l~~~--------~P~l~~~v~Dlp~ 214 (214)
++.-+|+|+||++|.-+ + ++.++ -|..++..=|||.
T Consensus 50 ~~~~~IADlGCS~G~Ntl~~v~~iI~~i~~~~~~~~~~~~pe~qvf~nDLP~ 101 (359)
T d1m6ex_ 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPG 101 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTT
T ss_pred CCceEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCCCCc
Confidence 34457999999999865 2 33322 3566777788884
No 271
>d2ao9a1 a.4.1.17 (A:13-132) Phage protein BC1890 {Bacillus cereus [TaxId: 1396]}
Probab=31.71 E-value=10 Score=25.09 Aligned_cols=22 Identities=9% Similarity=0.021 Sum_probs=20.3
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
...|-+|||+.+|++. ..|.||
T Consensus 35 ekktqeqiAeelGisr---~tLyrW 56 (120)
T d2ao9a1 35 EKRTQDEMANELGINR---TTLWEW 56 (120)
T ss_dssp CCCCHHHHHHHHTCCH---HHHHHH
T ss_pred hhhhHHHHHHHhChhH---HHHHHH
Confidence 5689999999999998 899999
No 272
>d1zara1 a.4.5.56 (A:2-90) Rio2 serine protein kinase N-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=31.12 E-value=19 Score=22.77 Aligned_cols=47 Identities=9% Similarity=0.015 Sum_probs=38.9
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeecCCCCCCccceeeCCCC
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQKDGKNEQEEESILLPPH 104 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~y~~t~~ 104 (214)
.-++.+.|++.+++++ ..+...|+-|...+++...... -+-|++|-.
T Consensus 28 E~VP~~lI~~~a~l~~---~~~~~~L~~L~k~kLv~~~~~~-----Y~GYrLT~~ 74 (89)
T d1zara1 28 EYVPLQLISSHARIGE---EKARNILKYLSDLRVVQNRQKD-----YEGSTFTFI 74 (89)
T ss_dssp SSEEHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEEECSS-----SCEEEECHH
T ss_pred ccccHHHHHHHHCCCH---HHHHHHHHHHHHcCCeeccCCC-----cceEEeecc
Confidence 7789999999999998 8999999999999999876420 256777655
No 273
>d1t1ea2 d.58.3.2 (A:12-190) Pro-kumamolisin activation domain {Bacillus sp. MN-32 [TaxId: 198803]}
Probab=30.85 E-value=17 Score=25.84 Aligned_cols=34 Identities=3% Similarity=-0.081 Sum_probs=30.7
Q ss_pred CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCcee
Q 040620 49 GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFV 85 (214)
Q Consensus 49 ~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~ 85 (214)
+..+|.+|++++.+-++ ..+..+...|.+.||=.
T Consensus 58 g~~Lt~~e~~~~f~ps~---~~~~~V~~wL~~~Gl~v 91 (179)
T d1t1ea2 58 RVHLEREAFAASHGASL---DDFAEIRKFAEAHGLTL 91 (179)
T ss_dssp CCCCCHHHHHHHHSCCH---HHHHHHHHHHHHTTCEE
T ss_pred cccCCHHHHHHHHCCCH---HHHHHHHHHHHHcCCcc
Confidence 47899999999999999 88899999999999854
No 274
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=30.57 E-value=8.6 Score=23.26 Aligned_cols=21 Identities=14% Similarity=0.145 Sum_probs=16.5
Q ss_pred hhcCC-CCCCHHHHHHHcCCCC
Q 040620 45 INNSG-QPMTLTQIIVALNVHP 65 (214)
Q Consensus 45 L~~~~-~p~t~~eLA~~~g~~~ 65 (214)
+.+.| ..+|+.+||+++|++.
T Consensus 20 ~~~~G~~~~t~~~Ia~~agvs~ 41 (78)
T d2o7ta1 20 YRTHHHDSLTMENIAEQAGVGV 41 (78)
T ss_dssp HHHSCGGGCCHHHHHHHHTCCH
T ss_pred HHHhCccccCHHHHHHHhCCCH
Confidence 44433 5699999999999986
No 275
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=30.50 E-value=7.8 Score=23.01 Aligned_cols=23 Identities=9% Similarity=0.439 Sum_probs=17.3
Q ss_pred hhhhcCC-CCCCHHHHHHHcCCCC
Q 040620 43 DIINNSG-QPMTLTQIIVALNVHP 65 (214)
Q Consensus 43 d~L~~~~-~p~t~~eLA~~~g~~~ 65 (214)
+++.+.| ..+|+.+||+++|+++
T Consensus 17 ~l~~~~G~~~~sv~~Ia~~agvs~ 40 (71)
T d2iu5a1 17 DLMQSNAYHQISVSDIMQTAKIRR 40 (71)
T ss_dssp HHHHHSCGGGCCHHHHHHHHTSCG
T ss_pred HHHHHcCcccCCHHHHHHHhCccc
Confidence 3444433 5689999999999987
No 276
>d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=30.44 E-value=9.3 Score=22.64 Aligned_cols=20 Identities=30% Similarity=0.395 Sum_probs=16.1
Q ss_pred CCCHHHHHHHcCCCCCCcccHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
..|+++||+++|+++ ..+.+
T Consensus 20 ~~t~~~Ia~~agvs~---~~~Y~ 39 (70)
T d2hkua1 20 GVPITQICAAAGAHP---NQVTY 39 (70)
T ss_dssp TSCHHHHHHHHTCCH---HHHHH
T ss_pred CchHHHHHHHHCCCh---hhHHh
Confidence 479999999999987 55543
No 277
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=30.04 E-value=18 Score=22.62 Aligned_cols=42 Identities=19% Similarity=0.117 Sum_probs=30.8
Q ss_pred hHHHHHHHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 040620 28 MKSLSLKRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAH 80 (214)
Q Consensus 28 ~~~~~L~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~ 80 (214)
+...|++.|.+. . +.|.|..|||+.+++++ ..+.+..+.+..
T Consensus 47 iaaA~iY~Acr~------~--~~~~t~~eIa~~~~is~---~ti~k~yk~i~~ 88 (98)
T d1aisb1 47 VMAACVYAACRL------L--KVPRTLDEIADIARVDK---KEIGRSYRFIAR 88 (98)
T ss_dssp HHHHHHHHHHHH------H--TCCCCHHHHHHHTTSCH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH------c--CCCCCHHHHHHHHCCCH---HHHHHHHHHHHH
Confidence 455666666542 2 38999999999999998 777777666544
No 278
>d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=29.79 E-value=13 Score=25.87 Aligned_cols=32 Identities=22% Similarity=0.299 Sum_probs=24.0
Q ss_pred CCCcEEeecCCchH----HHHHHHHHCCCCeEEEec
Q 040620 180 GLKPLVDVGGSTGT----MARAIATAFPDTKCTVFA 211 (214)
Q Consensus 180 ~~~~vvDVGGG~G~----~~~~l~~~~P~l~~~v~D 211 (214)
++..++|||||.-. -+..+.-..|+.+++.++
T Consensus 44 ~pANFlDiGGga~~e~v~~al~iil~d~~Vk~IlIN 79 (148)
T d1eucb1 44 KPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVN 79 (148)
T ss_dssp CBSEEEECCSSCCHHHHHHHHHHTTSCTTCCEEEEE
T ss_pred CeeeEEecCCCCCHHHHHHHHHHHHCCCCccEEEEE
Confidence 46789999999654 345667788999987764
No 279
>d1t6sa2 a.4.5.60 (A:86-162) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=29.77 E-value=15 Score=22.65 Aligned_cols=40 Identities=18% Similarity=0.176 Sum_probs=31.6
Q ss_pred chhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeeec
Q 040620 42 PDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQK 88 (214)
Q Consensus 42 fd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 88 (214)
..+++=. +|+|-.||.+--|++. . ..|+.|...|++...+
T Consensus 15 LaiIAY~-QPiTr~eI~~IRGv~s---~---~~l~~L~~~glI~~~g 54 (77)
T d1t6sa2 15 LAVVAWH-QPVTKGEIQQIRGASP---D---YSIDRLLARGLIEVRG 54 (77)
T ss_dssp HHHHHHH-CSEEHHHHHHHHTCCC---C---SHHHHHHHTTSEEEEE
T ss_pred HHHHHHc-CCcCHHHHHHhcCCCc---H---HHHHHHHHHHHHHHcC
Confidence 3445544 8999999999999987 4 4578899999998653
No 280
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=29.70 E-value=8.4 Score=21.75 Aligned_cols=22 Identities=14% Similarity=0.098 Sum_probs=18.3
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
+...++||..+|+++ +.+..|-
T Consensus 26 ~~~r~~LA~~lgL~~---~qV~vWF 47 (53)
T d1p7ia_ 26 ERRRQQLSSELGLNE---AQIKIWF 47 (53)
T ss_dssp HHHHHHHHHHHTCCH---HHHHHHH
T ss_pred HHHHHHHHHHhCCCh---HHhhhcc
Confidence 456789999999998 8888774
No 281
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=29.65 E-value=9.1 Score=22.51 Aligned_cols=16 Identities=6% Similarity=0.100 Sum_probs=14.7
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
...|+.+||+++|+++
T Consensus 21 ~~~ti~~Ia~~agvs~ 36 (68)
T d2d6ya1 21 AGARIDRIAAEARANK 36 (68)
T ss_dssp TSCCHHHHHHHHTCCH
T ss_pred cccCHHHHHHHHCcch
Confidence 6799999999999987
No 282
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=28.54 E-value=4.2 Score=24.35 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=14.5
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
..+|+.+||+++|+++
T Consensus 22 ~~~t~~~Ia~~agvs~ 37 (72)
T d1zk8a1 22 QEVTLASLAQTLGVRS 37 (72)
T ss_dssp GGCCHHHHHHHHTSCH
T ss_pred CcccHHHHHHHhCCCH
Confidence 5699999999999987
No 283
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.46 E-value=10 Score=21.35 Aligned_cols=24 Identities=4% Similarity=0.098 Sum_probs=19.4
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.....++||..+|+++ +.+..|..
T Consensus 23 ~~~~~~~LA~~lgl~~---~qV~~WFq 46 (53)
T d1le8a_ 23 NSKEKEEVAKKCGITP---LQVRVWFI 46 (53)
T ss_dssp CHHHHHHHHHHTTSCH---HHHHHHHH
T ss_pred CHHHHHHHHHHHCCCH---HHHHHHHH
Confidence 3456789999999999 88888753
No 284
>d1x57a1 a.35.1.12 (A:8-85) Endothelial differentiation-related factor 1, EDF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.43 E-value=11 Score=22.82 Aligned_cols=22 Identities=14% Similarity=0.244 Sum_probs=18.1
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
..+|-.+||+++|++. ..+.+|
T Consensus 18 ~gltq~~lA~~~gis~---~~is~~ 39 (78)
T d1x57a1 18 KGLTQKDLATKINEKP---QVIADY 39 (78)
T ss_dssp TTCCHHHHHHHHTSCH---HHHHHH
T ss_pred cCCChhHHHHcCCCCH---HHHHHH
Confidence 6799999999999987 565555
No 285
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=28.31 E-value=8.2 Score=22.67 Aligned_cols=21 Identities=14% Similarity=0.082 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
...|+.+||+++|+++ ..+.+
T Consensus 25 ~~~t~~~Ia~~agvs~---~~iY~ 45 (68)
T d2id3a1 25 DALDLGEIARRAGVGK---TTVYR 45 (68)
T ss_dssp GGCCHHHHHHHHTCCH---HHHHH
T ss_pred ccCCHHHHHHHHCcCH---HHHHH
Confidence 5689999999999987 55543
No 286
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=28.14 E-value=13 Score=24.33 Aligned_cols=26 Identities=8% Similarity=0.201 Sum_probs=21.7
Q ss_pred hcCcchhhhcCCCCCCHHHHHHHcCCCC
Q 040620 38 QLRIPDIINNSGQPMTLTQIIVALNVHP 65 (214)
Q Consensus 38 ~lglfd~L~~~~~p~t~~eLA~~~g~~~ 65 (214)
+-.|+++|.+ +|+|+.+||+.+++.+
T Consensus 13 RerIi~lL~~--~~~ta~eia~~l~i~~ 38 (105)
T d2gmga1 13 REKIIELLLE--GDYSPSELARILDMRG 38 (105)
T ss_dssp HHHHHHHTTT--SCBCTTHHHHSSCCCS
T ss_pred HHHHHHHHHc--CCCCHHHHHHHhcccc
Confidence 4457888887 7899999999999965
No 287
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.04 E-value=11 Score=20.87 Aligned_cols=23 Identities=9% Similarity=-0.031 Sum_probs=18.6
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
.....++||+.+|+++ +.++.|-
T Consensus 24 ~~~~~~~LA~~l~l~~---~~V~~WF 46 (50)
T d1s7ea1 24 SKELQITISQQLGLEL---STVSNFF 46 (50)
T ss_dssp THHHHHHHHTTSCSSS---HHHHHHH
T ss_pred CHHHHHHHHHHHCcCH---HHhhhcC
Confidence 3456789999999999 8888774
No 288
>d1rjda_ c.66.1.37 (A:) Leucine carboxy methyltransferase Ppm1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.88 E-value=12 Score=29.35 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=30.7
Q ss_pred CCcEEeecCCchHHHHHHHHHCCCCeEEEecCCC
Q 040620 181 LKPLVDVGGSTGTMARAIATAFPDTKCTVFACHL 214 (214)
Q Consensus 181 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~ 214 (214)
...||-+|||.=+....+.+.+|+++++=+|.|+
T Consensus 97 ~~QVV~LGaG~DTr~~Rl~~~~~~~~~~EvD~p~ 130 (328)
T d1rjda_ 97 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNE 130 (328)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHH
T ss_pred CcEEEEeCCccchHHHHhhccCCCcEEEECCcHH
Confidence 4689999999999999999999999999999873
No 289
>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage Mu [TaxId: 10677]}
Probab=27.85 E-value=14 Score=23.53 Aligned_cols=39 Identities=10% Similarity=0.025 Sum_probs=28.5
Q ss_pred HHHHhcCcchhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHHH
Q 040620 34 KRAIQLRIPDIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLLA 79 (214)
Q Consensus 34 ~~a~~lglfd~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~ 79 (214)
...-...|+... .+.++.+||.+.+++. +.++++++-..
T Consensus 53 ~~~Rn~~I~~ef----~G~n~~eLA~kY~lS~---~~I~~Ii~~~r 91 (94)
T d1rr7a_ 53 SLIRDLRIWNDF----NGRNVSELTTRYGVTF---NTVYKAIRRMR 91 (94)
T ss_dssp HHHHHHHHHHHC----CSSCHHHHHHHHTCCH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----CCCCHHHHHHHHCCCH---HHHHHHHHHHH
Confidence 333344555544 3569999999999999 99999987653
No 290
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.38 E-value=11 Score=21.85 Aligned_cols=22 Identities=18% Similarity=0.095 Sum_probs=18.3
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
....++||+.+|+++ +.+..|-
T Consensus 28 ~~~r~~LA~~l~l~~---~qV~vWF 49 (58)
T d2craa1 28 KDKRRKISAATSLSE---RQITIWF 49 (58)
T ss_dssp HHHHHHHHHHTCCCH---HHHHHHH
T ss_pred HHHHHHHHHHcCCCH---HHeeecc
Confidence 456789999999999 8888775
No 291
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.38 E-value=13 Score=20.96 Aligned_cols=24 Identities=17% Similarity=0.068 Sum_probs=19.5
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.....++||+.+|+++ +.+..|..
T Consensus 20 ~~~~~~~LA~~~~ls~---~qV~~WFq 43 (52)
T d1x2ma1 20 DEKRLEGLSKQLDWDV---RSIQRWFR 43 (52)
T ss_dssp CHHHHHHHHHHHCSCH---HHHHHHHH
T ss_pred CHHHHHHHHHHHCcCH---HHHHHHHH
Confidence 3456789999999999 88888864
No 292
>d2np3a1 a.4.1.9 (A:35-99) Putative transcriptional regulator SCO0857 {Streptomyces coelicolor [TaxId: 1902]}
Probab=27.34 E-value=6.2 Score=23.15 Aligned_cols=22 Identities=18% Similarity=0.290 Sum_probs=0.8
Q ss_pred hhhcCC-CCCCHHHHHHHcCCCC
Q 040620 44 IINNSG-QPMTLTQIIVALNVHP 65 (214)
Q Consensus 44 ~L~~~~-~p~t~~eLA~~~g~~~ 65 (214)
++.+.| ...|.++||+++|+++
T Consensus 8 l~~~~G~~~~s~~~IA~~agvs~ 30 (65)
T d2np3a1 8 CFAERGFDATSLRRIAETAGVDQ 30 (65)
T ss_dssp HC---------------------
T ss_pred HHHHHCcccCCHHHHHHHHCcCH
Confidence 344443 5799999999999987
No 293
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=27.18 E-value=30 Score=22.66 Aligned_cols=29 Identities=7% Similarity=0.222 Sum_probs=23.8
Q ss_pred CCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 52 MTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 52 ~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
|++.|+|+.+|+++ +.||+=...|++...
T Consensus 1 m~Ige~A~~~gvs~-------~TlR~Ye~~GLl~p~ 29 (127)
T d1q06a_ 1 MNISDVAKITGLTS-------KAIRFYEEKGLVTPP 29 (127)
T ss_dssp CCHHHHHHHHTCCH-------HHHHHHHHTTCSCCC
T ss_pred CCHHHHHHHHCcCH-------HHHHHHHHcCCCCCC
Confidence 68899999999995 556777889999853
No 294
>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.17 E-value=24 Score=26.77 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=30.2
Q ss_pred cCCCCcEEeecCCchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGSTGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.....+|+|+..++|.=+..+++..++-+++..|.
T Consensus 100 ~~~g~~vLD~CAaPGgKt~~la~l~~~~~i~a~d~ 134 (284)
T d1sqga2 100 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDI 134 (284)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEES
T ss_pred ccccceeEeccCccccchhhhhhhhhhhhhhhhhc
Confidence 34567999999999999999999988888888875
No 295
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=27.10 E-value=9.9 Score=21.87 Aligned_cols=21 Identities=24% Similarity=0.210 Sum_probs=17.8
Q ss_pred CCHHHHHHHcCCCCCCcccHHHHH
Q 040620 52 MTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 52 ~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
....+||..+|+++ +.+..|-
T Consensus 25 ~~r~~LA~~l~l~~---~~V~iWF 45 (56)
T d9anta_ 25 RRRIEIAHALSLTE---RQIKIWF 45 (56)
T ss_dssp HHHHHHHHHHTCCH---HHHHHHH
T ss_pred HHHHHHHHHhCCCh---hHeeecc
Confidence 45689999999999 8888875
No 296
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=27.02 E-value=7.4 Score=23.03 Aligned_cols=16 Identities=13% Similarity=0.144 Sum_probs=14.6
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
...|+.+||+++|+++
T Consensus 20 ~~~ti~~Ia~~agvs~ 35 (72)
T d1vi0a1 20 HQSQVSKIAKQAGVAD 35 (72)
T ss_dssp GGCCHHHHHHHHTSCH
T ss_pred ccccHHHHHHHHCcCH
Confidence 5699999999999987
No 297
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=26.95 E-value=7.8 Score=23.56 Aligned_cols=16 Identities=6% Similarity=0.142 Sum_probs=14.8
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
..+|+.+||+++|+++
T Consensus 30 ~~~ti~~Ia~~agvs~ 45 (81)
T d1rkta1 30 ELTTMKDVVEESGFSR 45 (81)
T ss_dssp TTCCHHHHHHHHTSCH
T ss_pred ccCCHHHHHHHhCcCH
Confidence 6799999999999987
No 298
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Probab=26.80 E-value=39 Score=23.25 Aligned_cols=35 Identities=17% Similarity=-0.001 Sum_probs=26.8
Q ss_pred cCCCCcEEeecCCc-hHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGST-GTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG~-G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.....+|+=+|+|. |.++.++++..--.++++.|.
T Consensus 25 ~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~ 60 (174)
T d1jqba2 25 IEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60 (174)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECC
T ss_pred CCCCCEEEEEcCCcchhhhhhhhhcccccccccccc
Confidence 45566788788876 899999999765557888774
No 299
>d1sfea1 a.4.2.1 (A:93-176) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=26.54 E-value=16 Score=22.77 Aligned_cols=42 Identities=10% Similarity=0.169 Sum_probs=27.9
Q ss_pred cCcchhhhcC--CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCce
Q 040620 39 LRIPDIINNS--GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFF 84 (214)
Q Consensus 39 lglfd~L~~~--~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l 84 (214)
..|++.|.+- |...|+.|||+.+|.+ ...+.+-.+|.+.-+.
T Consensus 6 ~~V~~~l~~Ip~G~v~TYg~iA~~~g~~----~a~RaVg~a~~~Np~~ 49 (84)
T d1sfea1 6 QQVWQALRTIPCGETVSYQQLANAIGKP----KAVRAVASACAANKLA 49 (84)
T ss_dssp HHHHHHHTTSCTTCCEEHHHHHHHTTCT----TCHHHHHHHHHTCCBB
T ss_pred HHHHHHHHcCCCCCeeeHHHHHHHhCCc----ccHHHHHHHHhcCCCC
Confidence 3445555543 4779999999999975 5566666666654443
No 300
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=26.44 E-value=8.7 Score=23.18 Aligned_cols=16 Identities=13% Similarity=0.272 Sum_probs=14.6
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
..+|+.+||+++|+++
T Consensus 28 ~~~t~~~Ia~~agvs~ 43 (79)
T d2oi8a1 28 SALSLNAIAKRMGMSG 43 (79)
T ss_dssp TSCCHHHHHHHTTCCH
T ss_pred cccCHHHHHHHhCCCC
Confidence 5689999999999987
No 301
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.84 E-value=38 Score=23.07 Aligned_cols=33 Identities=30% Similarity=0.274 Sum_probs=25.3
Q ss_pred cCCCCcEEeec--CCchHHHHHHHHHCCCCeEEEec
Q 040620 178 SKGLKPLVDVG--GSTGTMARAIATAFPDTKCTVFA 211 (214)
Q Consensus 178 ~~~~~~vvDVG--GG~G~~~~~l~~~~P~l~~~v~D 211 (214)
..+..+|+-.| |+.|..++++++.. ..++++.+
T Consensus 26 ~~~g~~VlV~Ga~G~vG~~aiq~a~~~-G~~vi~~~ 60 (174)
T d1yb5a2 26 VKAGESVLVHGASGGVGLAACQIARAY-GLKILGTA 60 (174)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCCCCEEEEEecccccccccccccccc-Cccccccc
Confidence 55677899887 57889999999886 46766654
No 302
>d1fnna1 a.4.5.11 (A:277-388) CDC6, C-terminal domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=25.27 E-value=29 Score=22.51 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=28.8
Q ss_pred HHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 54 LTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 54 ~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
+.+|++..|++|-..+.+..+|.-|...|++...
T Consensus 41 Y~~lc~~~~~~pls~rr~~~~l~~Le~lGiI~~r 74 (112)
T d1fnna1 41 YKIVCEEYGERPRVHSQLWSYLNDLREKGIVETR 74 (112)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHHHHHTTSSEEE
T ss_pred HHHHHHHcCcchhhHHHHHHHHHHHHhCCCeeee
Confidence 5778999999886667799999999999999853
No 303
>d2es9a1 a.247.1.1 (A:11-107) Hypothetical protein YoaC {Salmonella typhimurium [TaxId: 90371]}
Probab=25.24 E-value=11 Score=23.51 Aligned_cols=40 Identities=13% Similarity=0.249 Sum_probs=28.4
Q ss_pred HHHHHhcCcchhhhcCCCCCCHHHHHHHc---CCCCCCcccHHHHH
Q 040620 33 LKRAIQLRIPDIINNSGQPMTLTQIIVAL---NVHPNKTRCTQILV 75 (214)
Q Consensus 33 L~~a~~lglfd~L~~~~~p~t~~eLA~~~---g~~~~~~~~l~rlL 75 (214)
+.--.--|||.+|.+-|-|.|.++++.+- |-+| ....++.
T Consensus 23 M~ESTAKGifKyLkelGVPas~~dv~aRg~qegWn~---gFT~K~~ 65 (97)
T d2es9a1 23 MDESTAKGILKYLHDLGVPVSPEVVVARGEQEGWNP---EFTKKVA 65 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCCH---HHHHHHH
T ss_pred cchHHHHHHHHHHHHcCCCCCHHHHHHhcccccCCh---hHHHHHH
Confidence 33334468999999988999999998765 5566 5444443
No 304
>d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.13 E-value=29 Score=24.03 Aligned_cols=32 Identities=22% Similarity=0.222 Sum_probs=24.4
Q ss_pred CCCcEEeecCCchH----HHHHHHHHCCCCeEEEec
Q 040620 180 GLKPLVDVGGSTGT----MARAIATAFPDTKCTVFA 211 (214)
Q Consensus 180 ~~~~vvDVGGG~G~----~~~~l~~~~P~l~~~v~D 211 (214)
++.-++|+|||.-. -+..+.-..|+.+++.+.
T Consensus 44 ~pANFlDiGG~a~~e~v~~al~lil~d~~vk~IlIN 79 (150)
T d2nu7b1 44 EPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVN 79 (150)
T ss_dssp CBCEEEECCSCCCHHHHHHHHHHHHTSTTCCEEEEE
T ss_pred CeeEEEecCCCccHHHHHHHHHHHHcCCCCCEEEEE
Confidence 46789999999765 345667778999987764
No 305
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=25.01 E-value=7.4 Score=23.35 Aligned_cols=22 Identities=18% Similarity=0.382 Sum_probs=16.8
Q ss_pred hhhcCC-CCCCHHHHHHHcCCCC
Q 040620 44 IINNSG-QPMTLTQIIVALNVHP 65 (214)
Q Consensus 44 ~L~~~~-~p~t~~eLA~~~g~~~ 65 (214)
++.+.| ..+|+.+||+++|+++
T Consensus 17 l~~~~G~~~~t~~~Ia~~agvs~ 39 (75)
T d2hyja1 17 IASEEGLDGITIGRLAEELEMSK 39 (75)
T ss_dssp HHHHHCGGGCCHHHHHHHHTCCH
T ss_pred HHHHhCcccCcHHHHHHHHCcCH
Confidence 344433 5699999999999987
No 306
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]}
Probab=24.84 E-value=31 Score=28.49 Aligned_cols=22 Identities=9% Similarity=-0.049 Sum_probs=18.4
Q ss_pred CCCcEEeecCCchHHHHHHHHH
Q 040620 180 GLKPLVDVGGSTGTMARAIATA 201 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~ 201 (214)
...+|+|-.||+|.++.+..+.
T Consensus 164 ~~~~i~DPacGsG~fL~~a~~~ 185 (524)
T d2ar0a1 164 PREVVQDPAAGTAGFLIEADRY 185 (524)
T ss_dssp TTCCEEETTCTTTHHHHHHHHH
T ss_pred cchhhcchhhhcchhhHHHHHH
Confidence 3569999999999999877664
No 307
>d1mgta1 a.4.2.1 (A:89-169) O6-alkylguanine-DNA alkyltransferase {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=24.79 E-value=13 Score=23.10 Aligned_cols=24 Identities=29% Similarity=0.387 Sum_probs=18.3
Q ss_pred CCCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 49 GQPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 49 ~~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
|.-.|+.|||+.+|.++ |.+...|
T Consensus 19 G~v~TYg~iA~~~g~~~---RaVg~a~ 42 (81)
T d1mgta1 19 GSVITYGDLAKALNTSP---RAVGGAM 42 (81)
T ss_dssp TCCEEHHHHHHHTTSCH---HHHHHHH
T ss_pred CCeEeHHHHHHHcCCcH---HHHHHHH
Confidence 47899999999999766 6554443
No 308
>d1vpta_ c.66.1.25 (A:) Polymerase regulatory subunit VP39 {Vaccinia virus [TaxId: 10245]}
Probab=24.42 E-value=21 Score=27.69 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=28.4
Q ss_pred CCCcEEeecCCchHHHHHHHHHCCCC----eEEEec
Q 040620 180 GLKPLVDVGGSTGTMARAIATAFPDT----KCTVFA 211 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~~~l~~~~P~l----~~~v~D 211 (214)
+..+||=||.|.|....-|.+.||++ +.+++|
T Consensus 60 ~~~~VVYiGSApG~Hi~~L~~lf~~~~~~ikw~LiD 95 (297)
T d1vpta_ 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLID 95 (297)
T ss_dssp TTCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCcEEEEeccCCCchHHHHHHHHHhhCCceEEEEEC
Confidence 45699999999999999999999975 688887
No 309
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=24.25 E-value=12 Score=21.46 Aligned_cols=23 Identities=9% Similarity=0.122 Sum_probs=18.6
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
.+...++||..+|+++ +.+..|.
T Consensus 25 ~~~~r~~LA~~lgl~~---~qV~vWF 47 (57)
T d1jgga_ 25 SRPRRCELAAQLNLPE---STIKVWF 47 (57)
T ss_dssp CHHHHHHHHHHHTSCH---HHHHHHH
T ss_pred CHHHHHHHHHHhCCCh---hHhhhcc
Confidence 3456789999999998 8888775
No 310
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=23.67 E-value=36 Score=21.50 Aligned_cols=29 Identities=7% Similarity=-0.022 Sum_probs=23.7
Q ss_pred CCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceeee
Q 040620 52 MTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQQ 87 (214)
Q Consensus 52 ~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 87 (214)
.|+.|+|+.+|+++ +.||+-...|++...
T Consensus 3 ytI~e~A~~~gvs~-------~tlR~Ye~~GLl~p~ 31 (109)
T d1r8da_ 3 YQVKQVAEISGVSI-------RTLHHYDNIELLNPS 31 (109)
T ss_dssp BCHHHHHHHHSCCH-------HHHHHHHHTTSSCCS
T ss_pred ccHHHHHHHHCcCH-------HHHHHHHHcCCcCCc
Confidence 58999999999985 456777889999844
No 311
>d1a9xa1 a.92.1.1 (A:403-555) Carbamoyl phosphate synthetase, large subunit connection domain {Escherichia coli [TaxId: 562]}
Probab=23.53 E-value=16 Score=25.49 Aligned_cols=30 Identities=10% Similarity=0.123 Sum_probs=23.4
Q ss_pred hhhhcCCCCCCHHHHHHHcCCCCCCcccHHHHHHHH
Q 040620 43 DIINNSGQPMTLTQIIVALNVHPNKTRCTQILVCLL 78 (214)
Q Consensus 43 d~L~~~~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L 78 (214)
++|. .++|+++|.+.|++|| =-|.++-+..
T Consensus 39 eAlr---~G~sveeI~elTkID~---WFL~qi~~Iv 68 (153)
T d1a9xa1 39 DAFR---AGLSVDGVFNLTNIDR---WFLVQIEELV 68 (153)
T ss_dssp HHHH---TTBCHHHHHHHHCCCH---HHHHHHHHHH
T ss_pred HHHH---cCCCHHHHHHhhCeee---HHHHHHHHHH
Confidence 4556 4699999999999998 7777765543
No 312
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.50 E-value=38 Score=22.89 Aligned_cols=35 Identities=31% Similarity=0.286 Sum_probs=26.8
Q ss_pred cCCCCcEEeecC--CchHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGG--STGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGG--G~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.....+|+=+|| +.|.++..+++...-.++++.|.
T Consensus 25 ~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~ 61 (170)
T d1jvba2 25 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV 61 (170)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES
T ss_pred CCCCCEEEEEeccccceeeeeeccccccccccccccc
Confidence 556678888984 57788888999877678877764
No 313
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=23.34 E-value=21 Score=21.00 Aligned_cols=21 Identities=14% Similarity=-0.054 Sum_probs=17.0
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQI 73 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~r 73 (214)
..+|+.+||+++|+++ ..+.+
T Consensus 22 ~~~ti~~Ia~~agvs~---~~iY~ 42 (75)
T d2id6a1 22 DRATTDEIAEKAGVAK---GLIFH 42 (75)
T ss_dssp HHCCHHHHHHHHTCCT---HHHHH
T ss_pred cccCHHHHHHHhCCCH---HHHHH
Confidence 4589999999999998 55543
No 314
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.71 E-value=14 Score=21.07 Aligned_cols=22 Identities=9% Similarity=0.066 Sum_probs=18.1
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
+-..++||..+|+++ +.+..|.
T Consensus 27 ~~~r~~LA~~l~l~~---~~V~~WF 48 (58)
T d1ig7a_ 27 IAERAEFSSSLSLTE---TQVKIWF 48 (58)
T ss_dssp HHHHHHHHHHTTCCH---HHHHHHH
T ss_pred HHHHHHHHHHhCCCh---hheeecC
Confidence 456789999999998 8887775
No 315
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.70 E-value=14 Score=21.03 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=18.6
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
.....++||..+|+++ +.+..|-
T Consensus 26 ~~~~r~~LA~~l~L~~---~qV~~WF 48 (57)
T d2e1oa1 26 SPPERKRLAKMLQLSE---RQVKTWF 48 (57)
T ss_dssp CHHHHHHHHHHTTCCH---HHHHHHH
T ss_pred CHHHHHHHHHHhCCCH---HHhhHhh
Confidence 3456789999999998 8888775
No 316
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=22.66 E-value=18 Score=22.16 Aligned_cols=23 Identities=13% Similarity=0.196 Sum_probs=18.7
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
....++||+.+|+++ +.+..|..
T Consensus 48 ~~~~~~la~~~gl~~---~~i~vWFq 70 (80)
T d1wh7a_ 48 DVAVEQFCAETGVRR---QVLKIWMH 70 (80)
T ss_dssp THHHHHHHHHSCCCH---HHHHHHHH
T ss_pred HHHHHHHHHHHCCCH---HHeeeecc
Confidence 356889999999998 88888753
No 317
>d1yg2a_ a.4.5.61 (A:) Hypothetical protein AphA {Vibrio cholerae [TaxId: 666]}
Probab=22.49 E-value=18 Score=25.25 Aligned_cols=62 Identities=8% Similarity=0.080 Sum_probs=43.1
Q ss_pred cchhhhcCCCCCCHHHHHHHcC--------CCCCCcccHHHHHHHHHhCCceeeecCCCCC-CccceeeCCCCCcccccc
Q 040620 41 IPDIINNSGQPMTLTQIIVALN--------VHPNKTRCTQILVCLLAHSGFFVQQKDGKNE-QEEESILLPPHLDFFSRI 111 (214)
Q Consensus 41 lfd~L~~~~~p~t~~eLA~~~g--------~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~-~~~~~y~~t~~~~~~s~~ 111 (214)
|.-.|.. +|+|-=||.+.+. +++ -.+...|+-|...|++.......++ .+...|.+|+. ++.
T Consensus 6 iLg~L~~--~~~~GYei~~~~~~~~~~~w~~s~---g~iY~~L~kLe~~Gli~~~~~~~~~~~~rk~Y~iT~~----Gr~ 76 (178)
T d1yg2a_ 6 ILTVLST--RDATGYDITKEFSASIGYFWKASH---QQVYRELNKMGEQGLVTCVLEPQEGKPDRKVYSITQA----GRS 76 (178)
T ss_dssp HHHHHHH--CCBCHHHHHHHHTTGGGGTCCCCH---HHHHHHHHHHHHTTSEEECCC---------CEEECHH----HHH
T ss_pred HHHHHhh--CCCCHHHHHHHHHHHhCCccCCCC---CcHHHHHHHHHHCCCeEEEeeecCCCCCceEEEECHH----HHH
Confidence 4556666 8999999998874 455 7899999999999999865322111 12346999988 775
No 318
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=22.08 E-value=50 Score=22.53 Aligned_cols=35 Identities=26% Similarity=0.213 Sum_probs=26.2
Q ss_pred cCCCCcEEeecCC-chHHHHHHHHHCCCCeEEEecC
Q 040620 178 SKGLKPLVDVGGS-TGTMARAIATAFPDTKCTVFAC 212 (214)
Q Consensus 178 ~~~~~~vvDVGGG-~G~~~~~l~~~~P~l~~~v~Dl 212 (214)
.....+|+-+|+| .|.++.++++.+---++++.|.
T Consensus 26 ~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~ 61 (182)
T d1vj0a2 26 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 61 (182)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEES
T ss_pred CCCCCEEEEECCCccchhheeccccccccccccccc
Confidence 4456788888876 4889999999874347888775
No 319
>d2vkva1 a.4.1.9 (A:6-67) Tetracyclin repressor (Tet-repressor, TetR) {Escherichia coli [TaxId: 562]}
Probab=21.49 E-value=18 Score=20.64 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=14.4
Q ss_pred CCCCHHHHHHHcCCCC
Q 040620 50 QPMTLTQIIVALNVHP 65 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~ 65 (214)
..+|..+||+++|+++
T Consensus 18 ~~~s~~~Ia~~agvs~ 33 (62)
T d2vkva1 18 EGLTTRKLAQKLGVEQ 33 (62)
T ss_dssp HHCCHHHHHHHHTSCH
T ss_pred ccCCHHHHHHHhCCCH
Confidence 4689999999999987
No 320
>d1o1xa_ c.121.1.1 (A:) Putative sugar-phosphate isomerase {Thermotoga maritima [TaxId: 2336]}
Probab=21.43 E-value=19 Score=24.80 Aligned_cols=27 Identities=11% Similarity=0.044 Sum_probs=22.0
Q ss_pred cEEeecCCchHHHHHHHHHCCCCeEEE
Q 040620 183 PLVDVGGSTGTMARAIATAFPDTKCTV 209 (214)
Q Consensus 183 ~vvDVGGG~G~~~~~l~~~~P~l~~~v 209 (214)
..-=+-||+|.-..-.+.++|++|+.+
T Consensus 61 ~~GIliCGtG~G~siaANK~~GIRAa~ 87 (145)
T d1o1xa_ 61 DFGILLCGTGLGMSIAANRYRGIRAAL 87 (145)
T ss_dssp SEEEEEESSSHHHHHHHTTSTTCCEEE
T ss_pred cEEEEecCCcHHHHHHHHcCCCCeeee
Confidence 334478999999999999999999654
No 321
>d1pdoa_ c.54.1.1 (A:) IIA domain of mannose transporter, IIA-Man {Escherichia coli [TaxId: 562]}
Probab=21.25 E-value=13 Score=24.84 Aligned_cols=34 Identities=21% Similarity=0.083 Sum_probs=23.5
Q ss_pred CCCcEEeecCCchHHH-HHHHHHCCCCe-EEEecCC
Q 040620 180 GLKPLVDVGGSTGTMA-RAIATAFPDTK-CTVFACH 213 (214)
Q Consensus 180 ~~~~vvDVGGG~G~~~-~~l~~~~P~l~-~~v~Dlp 213 (214)
+.--+.|+.||+-.-. ..++..+|+.+ +++.++|
T Consensus 60 ~vliltDl~GGsp~n~~~~~~~~~~~v~visG~Nlp 95 (129)
T d1pdoa_ 60 GVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIP 95 (129)
T ss_dssp CEEEEESSTTSHHHHHHHHHHTTCTTEEEEESCCHH
T ss_pred CEEEEEeccccchhHHHHHHhccCCCEEEEEcCCHH
Confidence 3456779999998654 45666788887 4555554
No 322
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.23 E-value=16 Score=20.80 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=19.4
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
.+...++||+.+|+++ +.+..|-.
T Consensus 24 ~~~~~~~LA~~lgL~~---~qV~~WFq 47 (57)
T d1e3oc1 24 TSEDITLIAEQLNMEK---EVIRVWFS 47 (57)
T ss_dssp CHHHHHHHHHHHTCCH---HHHHHHHH
T ss_pred CHHHHHHHHHHHCCCH---HHHHHHHH
Confidence 4567889999999999 88887753
No 323
>d1dwka1 a.35.1.4 (A:1-86) Cyanase N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.23 E-value=17 Score=22.88 Aligned_cols=22 Identities=5% Similarity=0.099 Sum_probs=17.9
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQIL 74 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rl 74 (214)
.++|.++||+.+|.++ ..+...
T Consensus 25 kgltw~~IA~~iG~s~---vwvtaa 46 (86)
T d1dwka1 25 KDLSFAEIADGTGLAE---AFVTAA 46 (86)
T ss_dssp TTCCHHHHHTTSSSCH---HHHHHH
T ss_pred cCCCHHHHHHHhCCCH---HHHHHH
Confidence 6899999999999987 555433
No 324
>d2fq3a1 a.4.1.18 (A:311-395) Transcription regulatory protein swi3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.98 E-value=37 Score=20.96 Aligned_cols=54 Identities=7% Similarity=-0.038 Sum_probs=41.3
Q ss_pred HHHHHHHHhcCcchhhhcC-CCCCCHHHHHHHcCCCCCCcccHHHHHHHHHhCCceee
Q 040620 30 SLSLKRAIQLRIPDIINNS-GQPMTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFVQ 86 (214)
Q Consensus 30 ~~~L~~a~~lglfd~L~~~-~~p~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~ 86 (214)
+.-.+..++-.|...-..+ ...+|..+....+..+. ..+.|+.+.|...|++..
T Consensus 29 t~~~Yl~iRN~Il~~w~~np~~~Lt~~~~~~~~~~d~---~~~~ri~~FL~~~G~INf 83 (85)
T d2fq3a1 29 TPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVSGDA---AALFRLHKFLTKWGLINY 83 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSCSCH---HHHHHHHHHHHHTTSSSS
T ss_pred CHHHHHHHHHHHHHHHHhCCCeeeeHHHHHhhccCCH---HHHHHHHHHHHHcCccCc
Confidence 3455666666666665443 27799999999988777 899999999999998753
No 325
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.84 E-value=15 Score=21.76 Aligned_cols=22 Identities=14% Similarity=0.153 Sum_probs=18.4
Q ss_pred CCCHHHHHHHcCCCCCCcccHHHHH
Q 040620 51 PMTLTQIIVALNVHPNKTRCTQILV 75 (214)
Q Consensus 51 p~t~~eLA~~~g~~~~~~~~l~rlL 75 (214)
+..-.+||..+|+++ +.+..|-
T Consensus 28 ~~~r~~LA~~l~l~~---~~V~iWF 49 (67)
T d1zq3p1 28 APRLADLSAKLALGT---AQVKIWF 49 (67)
T ss_dssp HHHHHHHHHHHTSCH---HHHHHHH
T ss_pred HHHHHHHHHHhCCCc---cceeecc
Confidence 356789999999999 8888875
No 326
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.54 E-value=17 Score=20.75 Aligned_cols=24 Identities=13% Similarity=0.394 Sum_probs=19.4
Q ss_pred CCCCHHHHHHHcCCCCCCcccHHHHHH
Q 040620 50 QPMTLTQIIVALNVHPNKTRCTQILVC 76 (214)
Q Consensus 50 ~p~t~~eLA~~~g~~~~~~~~l~rlLr 76 (214)
......+||+.+|+++ +.+..|-.
T Consensus 25 ~~~~~~~La~~l~l~~---~~V~~WFq 48 (58)
T d1au7a1 25 SSQEIMRMAEELNLEK---EVVRVWFC 48 (58)
T ss_dssp CHHHHHHHHHHHTCCH---HHHHHHHH
T ss_pred CHHHHHHHHHHhCCCH---HHHHHHHH
Confidence 4467789999999999 88887753
No 327
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.49 E-value=25 Score=24.50 Aligned_cols=27 Identities=26% Similarity=0.443 Sum_probs=22.1
Q ss_pred cEEeecCCchHHHHHHHHHCCCCeEEE
Q 040620 183 PLVDVGGSTGTMARAIATAFPDTKCTV 209 (214)
Q Consensus 183 ~vvDVGGG~G~~~~~l~~~~P~l~~~v 209 (214)
..-=+-||+|.-..-.+.++|++|+.+
T Consensus 61 ~~GIliCGtG~G~sIaANK~~GIRAal 87 (156)
T d2vvpa1 61 SLGIVLGGSGNGEQIAANKVPGARCAL 87 (156)
T ss_dssp CEEEEEESSSHHHHHHHHTSTTCCEEE
T ss_pred ceEEEeecCcHHHHHHHHhhcCeEeee
Confidence 344478999999999999999999654
No 328
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=20.28 E-value=45 Score=21.30 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=22.2
Q ss_pred CCHHHHHHHcCCCCCCcccHHHHHHHHHhCCcee
Q 040620 52 MTLTQIIVALNVHPNKTRCTQILVCLLAHSGFFV 85 (214)
Q Consensus 52 ~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~ 85 (214)
.|+.|+|+.+|+++ +.||+-...|++.
T Consensus 4 ytI~evA~~~gvs~-------~tlR~Ye~~GLl~ 30 (118)
T d1r8ea1 4 YSIGEVSKLANVSI-------KALRYYDKIDLFK 30 (118)
T ss_dssp EEHHHHHHHHTCCH-------HHHHHHHHTTSSC
T ss_pred ccHHHHHHHHCcCH-------HHHHHHHHcCCcc
Confidence 57899999999995 4556677889995
Done!