Query 040622
Match_columns 235
No_of_seqs 114 out of 1562
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 10:10:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040622.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040622hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15004 alpha-ribazole phosph 100.0 1E-32 2.2E-37 226.6 16.1 172 2-205 8-186 (199)
2 PRK13463 phosphatase PhoE; Pro 100.0 1.1E-32 2.5E-37 227.1 16.3 174 2-206 10-190 (203)
3 PRK14116 gpmA phosphoglyceromu 100.0 1.8E-32 3.9E-37 229.7 17.6 180 2-206 9-220 (228)
4 PRK14119 gpmA phosphoglyceromu 100.0 4.3E-32 9.3E-37 227.5 18.1 179 2-205 9-219 (228)
5 TIGR03162 ribazole_cobC alpha- 100.0 8.2E-32 1.8E-36 216.9 15.9 166 2-200 6-177 (177)
6 PRK01112 phosphoglyceromutase; 100.0 2.9E-31 6.2E-36 222.3 17.7 193 2-207 9-220 (228)
7 PRK14118 gpmA phosphoglyceromu 100.0 3.2E-31 6.9E-36 222.1 17.3 179 2-205 8-218 (227)
8 PRK14117 gpmA phosphoglyceromu 100.0 4.9E-31 1.1E-35 221.3 18.3 179 2-205 9-219 (230)
9 PRK01295 phosphoglyceromutase; 100.0 9.3E-31 2E-35 216.2 17.9 178 2-206 10-196 (206)
10 TIGR03848 MSMEG_4193 probable 100.0 7.3E-31 1.6E-35 216.4 16.8 171 2-206 7-190 (204)
11 PRK03482 phosphoglycerate muta 100.0 1.1E-30 2.3E-35 217.0 17.4 171 2-205 9-187 (215)
12 TIGR01258 pgm_1 phosphoglycera 100.0 1.3E-30 2.7E-35 220.6 16.9 179 2-205 8-218 (245)
13 PRK14120 gpmA phosphoglyceromu 100.0 7.1E-30 1.5E-34 216.3 18.4 179 2-205 12-220 (249)
14 COG0406 phoE Broad specificity 100.0 6.1E-30 1.3E-34 211.2 17.4 175 2-206 10-191 (208)
15 PRK14115 gpmA phosphoglyceromu 100.0 8.5E-30 1.9E-34 215.8 17.5 180 2-206 8-219 (247)
16 PRK13462 acid phosphatase; Pro 100.0 1.2E-29 2.7E-34 209.1 17.7 163 2-205 13-184 (203)
17 PRK07238 bifunctional RNase H/ 100.0 7.3E-29 1.6E-33 221.9 17.4 172 2-205 179-357 (372)
18 PTZ00123 phosphoglycerate muta 100.0 1.5E-28 3.3E-33 206.9 17.1 170 11-205 6-206 (236)
19 KOG4754 Predicted phosphoglyce 99.9 2E-26 4.4E-31 185.0 15.3 193 3-212 31-234 (248)
20 PF00300 His_Phos_1: Histidine 99.9 4.6E-27 9.9E-32 184.6 8.1 144 2-172 7-158 (158)
21 PTZ00322 6-phosphofructo-2-kin 99.9 1.2E-25 2.5E-30 214.3 15.7 189 2-205 427-627 (664)
22 smart00855 PGAM Phosphoglycera 99.9 2.6E-25 5.6E-30 175.4 11.7 140 2-172 7-155 (155)
23 KOG0235 Phosphoglycerate mutas 99.9 1.8E-24 3.9E-29 177.1 16.2 181 2-206 13-202 (214)
24 PTZ00122 phosphoglycerate muta 99.9 8.8E-23 1.9E-27 177.1 17.1 157 2-205 110-277 (299)
25 COG0588 GpmA Phosphoglycerate 99.9 1.1E-22 2.4E-27 164.1 10.9 178 2-206 9-220 (230)
26 cd07067 HP_PGM_like Histidine 99.9 3.5E-21 7.5E-26 151.1 15.8 135 2-205 7-144 (153)
27 cd07040 HP Histidine phosphata 99.8 1E-17 2.2E-22 130.7 14.6 134 2-205 7-144 (153)
28 TIGR00249 sixA phosphohistidin 99.7 3.4E-16 7.3E-21 123.4 14.6 134 2-205 8-141 (152)
29 PRK10848 phosphohistidine phos 99.7 1.1E-15 2.4E-20 121.2 15.0 132 2-203 8-139 (159)
30 KOG3734 Predicted phosphoglyce 99.6 1.2E-15 2.7E-20 128.6 11.2 141 16-182 66-219 (272)
31 KOG0234 Fructose-6-phosphate 2 99.6 3.6E-15 7.9E-20 132.6 13.5 165 2-202 247-417 (438)
32 KOG4609 Predicted phosphoglyce 99.6 6E-15 1.3E-19 119.2 10.9 145 19-206 113-263 (284)
33 PRK06193 hypothetical protein; 99.6 1.3E-14 2.9E-19 119.2 11.8 117 2-174 50-172 (206)
34 PRK15416 lipopolysaccharide co 99.5 4.7E-13 1E-17 109.2 14.4 59 2-64 62-121 (201)
35 COG2062 SixA Phosphohistidine 99.5 2.5E-13 5.4E-18 107.3 11.8 135 2-205 9-143 (163)
36 cd07061 HP_HAP_like Histidine 97.0 0.00072 1.6E-08 56.8 4.3 50 18-67 17-74 (242)
37 KOG3720 Lysosomal & prostatic 93.5 0.12 2.6E-06 47.2 5.0 49 18-66 69-127 (411)
38 PF00328 His_Phos_2: Histidine 92.9 0.085 1.8E-06 45.9 2.9 51 16-66 59-116 (347)
39 KOG1057 Arp2/3 complex-interac 89.9 0.34 7.4E-06 46.9 3.6 50 18-67 510-572 (1018)
40 PRK10172 phosphoanhydride phos 84.1 1.5 3.3E-05 40.3 4.4 49 18-66 71-130 (436)
41 PRK10173 glucose-1-phosphatase 82.2 3 6.5E-05 38.2 5.5 51 16-66 67-128 (413)
42 PF12048 DUF3530: Protein of u 62.8 20 0.00043 31.4 5.7 43 139-181 174-216 (310)
43 PF14606 Lipase_GDSL_3: GDSL-l 49.4 18 0.00039 29.1 2.9 32 136-167 71-103 (178)
44 COG1136 SalX ABC-type antimicr 41.8 43 0.00093 28.1 4.2 35 139-173 175-209 (226)
45 PF02450 LCAT: Lecithin:choles 41.4 29 0.00063 31.4 3.4 37 130-167 92-128 (389)
46 KOG2728 Uncharacterized conser 36.7 32 0.0007 29.3 2.6 36 134-169 7-42 (302)
47 PF01764 Lipase_3: Lipase (cla 34.9 1.5E+02 0.0033 21.7 6.0 40 140-179 45-87 (140)
48 PF09370 TIM-br_sig_trns: TIM- 34.3 29 0.00063 29.8 2.1 38 134-172 190-227 (268)
49 KOG3734 Predicted phosphoglyce 31.0 13 0.00029 32.0 -0.5 64 2-66 20-89 (272)
50 PRK04946 hypothetical protein; 30.5 2.9E+02 0.0063 22.3 7.9 46 134-180 101-149 (181)
51 COG1134 TagH ABC-type polysacc 29.7 87 0.0019 26.6 4.1 28 139-167 180-207 (249)
52 COG3840 ThiQ ABC-type thiamine 29.5 85 0.0018 25.9 3.8 27 140-166 163-189 (231)
53 PLN02517 phosphatidylcholine-s 28.9 85 0.0018 30.4 4.3 39 129-167 181-222 (642)
54 COG1116 TauB ABC-type nitrate/ 28.9 83 0.0018 26.8 3.9 29 141-169 165-193 (248)
55 PF13479 AAA_24: AAA domain 28.5 1E+02 0.0022 25.1 4.3 38 134-171 104-141 (213)
56 COG1121 ZnuC ABC-type Mn/Zn tr 26.5 89 0.0019 26.7 3.7 24 142-166 175-198 (254)
57 PF13422 DUF4110: Domain of un 25.6 1.4E+02 0.0031 21.4 4.1 21 134-154 14-34 (96)
58 COG4525 TauB ABC-type taurine 25.0 94 0.002 26.0 3.4 35 139-173 165-199 (259)
59 COG0796 MurI Glutamate racemas 24.9 4.3E+02 0.0092 22.8 7.5 67 102-175 16-85 (269)
60 PF03610 EIIA-man: PTS system 24.6 68 0.0015 23.3 2.4 17 159-175 1-17 (116)
61 cd00006 PTS_IIA_man PTS_IIA, P 24.4 86 0.0019 23.1 2.9 17 159-175 2-18 (122)
62 COG3910 Predicted ATPase [Gene 24.2 1.2E+02 0.0027 25.1 3.9 39 156-216 177-215 (233)
63 cd04256 AAK_P5CS_ProBA AAK_P5C 22.9 1E+02 0.0022 26.7 3.5 29 142-171 33-61 (284)
64 PRK00865 glutamate racemase; P 22.2 4.8E+02 0.01 22.0 7.6 62 101-167 15-78 (261)
65 KOG2369 Lecithin:cholesterol a 21.7 1.1E+02 0.0025 28.5 3.6 45 134-179 157-202 (473)
66 TIGR02689 ars_reduc_gluta arse 21.7 87 0.0019 23.2 2.5 21 158-178 1-21 (126)
67 cd00519 Lipase_3 Lipase (class 21.5 3E+02 0.0065 22.3 6.0 42 137-178 106-150 (229)
68 cd03267 ABC_NatA_like Similar 21.1 1.6E+02 0.0035 24.2 4.3 29 140-168 187-215 (236)
69 cd03255 ABC_MJ0796_Lo1CDE_FtsE 21.1 1.6E+02 0.0034 23.7 4.1 29 140-168 174-202 (218)
70 cd03229 ABC_Class3 This class 21.0 1.7E+02 0.0036 22.9 4.2 29 140-168 134-162 (178)
71 smart00195 DSPc Dual specifici 20.7 1.5E+02 0.0032 21.9 3.6 36 135-171 57-92 (138)
72 cd03293 ABC_NrtD_SsuB_transpor 20.6 1.6E+02 0.0035 23.8 4.1 28 141-168 166-193 (220)
73 cd03259 ABC_Carb_Solutes_like 20.6 1.5E+02 0.0033 23.8 3.9 29 140-168 164-192 (213)
74 PF07819 PGAP1: PGAP1-like pro 20.6 1.8E+02 0.0039 24.0 4.4 34 134-167 55-94 (225)
75 cd03237 ABC_RNaseL_inhibitor_d 20.5 1.5E+02 0.0032 24.8 4.0 27 142-168 151-177 (246)
76 COG1122 CbiO ABC-type cobalt t 20.5 1.4E+02 0.0029 25.1 3.7 27 141-167 173-199 (235)
No 1
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=1e-32 Score=226.62 Aligned_cols=172 Identities=19% Similarity=0.125 Sum_probs=146.3
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.+|..|+|||+.|++||+.+++.|.. .+++.|||||+.||+|||+++++..+.
T Consensus 8 HG~t~~n~~~~~~G~~d~pLt~~G~~Qa~~~~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~~------------ 71 (199)
T PRK15004 8 HGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLRD----VPFDLVLCSELERAQHTARLVLSDRQL------------ 71 (199)
T ss_pred CCCCccccCCcEeCCCCCCcCHHHHHHHHHHHHHHhC----CCCCEEEECchHHHHHHHHHHHhcCCC------------
Confidence 999988853 667889999999999999999999987 489999999999999999999875443
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR 155 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~ 155 (235)
++.+++.|+|+ +|.| + .++...+|. .+..|..+ .....+|++||+.++..|+..+++.+.+.
T Consensus 72 ---------~~~~~~~L~E~~~G~~eg~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~gEs~~~~~~Rv~~~l~~l~~~ 138 (199)
T PRK15004 72 ---------PVHIIPELNEMFFGDWEMRHHRDLMQEDAE---NYAAWCND-WQHAIPTNGEGFQAFSQRVERFIARLSAF 138 (199)
T ss_pred ---------CceeChhheeCCCcccCCCCHHHHHHHCHH---HHHHHHhC-hhhcCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 77899999999 9999 5 778777877 67777654 22344679999999999999999999864
Q ss_pred -CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 156 -QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 156 -~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
.+++|||||||++|+++++++++.+...++ .+.++||+++.+.++++
T Consensus 139 ~~~~~iliVsHg~~i~~l~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~ 186 (199)
T PRK15004 139 QHYQNLLIVSHQGVLSLLIARLLGMPAEAMW---HFRVEQGCWSAIDINQG 186 (199)
T ss_pred CCCCeEEEEcChHHHHHHHHHHhCCCHHHHh---ccccCCceEEEEEecCC
Confidence 567999999999999999999998776553 45789999999999654
No 2
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=1.1e-32 Score=227.12 Aligned_cols=174 Identities=22% Similarity=0.226 Sum_probs=149.1
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.- +.+|..|+|||+.|++||+.+++.|.. .+++.|||||+.||+|||.+++...+.
T Consensus 10 HG~t~~n~~~~~~G~~d~~Lt~~G~~Qa~~~~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~~------------ 73 (203)
T PRK13463 10 HGETEWNVAKRMQGRKNSALTENGILQAKQLGERMKD----LSIHAIYSSPSERTLHTAELIKGERDI------------ 73 (203)
T ss_pred CCCCccchhCcccCCCCCCcCHHHHHHHHHHHHHhcC----CCCCEEEECCcHHHHHHHHHHHhcCCC------------
Confidence 999998854 667888999999999999999999987 489999999999999999999765433
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR 155 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~ 155 (235)
++.+++.|+|+ +|.| + .++.+.||. .+..|+.+ +..+.+|++||+.++..|+..+++.+.++
T Consensus 74 ---------~~~~~~~l~E~~~G~~eG~~~~e~~~~~p~---~~~~~~~~-~~~~~~~~gEs~~~~~~R~~~~l~~i~~~ 140 (203)
T PRK13463 74 ---------PIIADEHFYEINMGIWEGQTIDDIERQYPD---DIQLFWNE-PHLFQSTSGENFEAVHKRVIEGMQLLLEK 140 (203)
T ss_pred ---------CceECcCceeCCCCccCCCcHHHHhhhCHH---HHHHHHhC-hhccCCCCCeEHHHHHHHHHHHHHHHHHh
Confidence 78899999999 9988 5 888888998 78777765 44577889999999999999999998765
Q ss_pred -CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 156 -QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 156 -~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
.+++|||||||++|+++++++++.+...+++. ..+.||+++.+.+++++
T Consensus 141 ~~~~~vlvVsHg~~ir~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~ 190 (203)
T PRK13463 141 HKGESILIVSHAAAAKLLVGHFAGIEIENVWDD--PFMHSASLSIIEFEDGK 190 (203)
T ss_pred CCCCEEEEEeChHHHHHHHHHHhCCCHHHHhhc--cCccCceEEEEEEeCCc
Confidence 56799999999999999999999987655431 24789999999996543
No 3
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.8e-32 Score=229.74 Aligned_cols=180 Identities=14% Similarity=0.068 Sum_probs=146.5
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.+|+.|.|||+.|++||+.+++.|+..+ .+|+.|||||+.||+|||.+|++..+.
T Consensus 9 HGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~qTA~~i~~~~~~------------ 74 (228)
T PRK14116 9 HGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAGRLIKEAG--LEFDQAYTSVLTRAIKTLHYALEESDQ------------ 74 (228)
T ss_pred CCCCCCccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHHHHHHHHHHHhcCc------------
Confidence 999999864 77889999999999999999999998632 479999999999999999999764321
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccC-----------------------CcCCcC
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESED-----------------------DKLWKA 132 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~ 132 (235)
...++...+.|+|+ +|.| + .++.+.+|. ..+..|..+. ...+.+
T Consensus 75 ------~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (228)
T PRK14116 75 ------LWIPETKTWRLNERHYGALQGLNKKETAEKYGD--EQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRII 146 (228)
T ss_pred ------CCCCcccCcccccccchhhcCCCHHHHHHHhhh--hHHHHHhhcccccCcccccccccccccchhhhccCccCC
Confidence 11267788999999 9999 6 888888886 1144443320 012456
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh---cCCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 133 NTREPFEEVAARGIEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 133 ~~~Es~~e~~~R~~~~~~~l~~---~~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
|+|||+.++.+|+..+++.+.. ..+++|||||||++|+++++++++.+...++ .+.++||+++.++++++.
T Consensus 147 pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (228)
T PRK14116 147 PGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIM---NLEMATGEPVVYDFDEKL 220 (228)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHH---hccCCCCCeEEEEECCCC
Confidence 8999999999999999998763 2578999999999999999999999876654 468999999999999865
No 4
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4.3e-32 Score=227.49 Aligned_cols=179 Identities=18% Similarity=0.140 Sum_probs=145.6
Q ss_pred CCCCCccc-ccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEA-LLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~-~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|. .+.+|+.|+|||+.|++||+.++++|...+ .+++.|||||++||+|||.++++..+.
T Consensus 9 HGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~~TA~~i~~~~~~------------ 74 (228)
T PRK14119 9 HGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENN--IAIDVAFTSLLTRALDTTHYILTESKQ------------ 74 (228)
T ss_pred CCCCCcccCCCccCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEeCccHHHHHHHHHHHHhccc------------
Confidence 99999986 478889999999999999999999998632 479999999999999999999764321
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCc-----------------------CCcC
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDK-----------------------LWKA 132 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~ 132 (235)
...++...++|+|+ +|.| + +++.+.+|. ..+..|..+.+. ...+
T Consensus 75 ------~~~~~~~~~~LrE~~fG~weG~~~~ei~~~~~~--~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 146 (228)
T PRK14119 75 ------QWIPVYKSWRLNERHYGGLQGLNKDDARKEFGE--EQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMM 146 (228)
T ss_pred ------CCCCeeECCCccccccccccCCcHHHHHHHccH--HHHHHHHcccccCCCcccccccccccccccccccccccC
Confidence 11277889999999 9999 6 889888886 224445432110 1235
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhc---CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 133 NTREPFEEVAARGIEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 133 ~~~Es~~e~~~R~~~~~~~l~~~---~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
|+|||+.++..|+..+++.+... .+++|||||||++|+++++++++.+...++ .+.++||+++.++++++
T Consensus 147 p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 219 (228)
T PRK14119 147 PYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDII---NYEIKTGAPLVYELTDD 219 (228)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHHh---hcCCCCCceEEEEECCC
Confidence 79999999999999999997643 568999999999999999999998876553 45799999999999876
No 5
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=99.98 E-value=8.2e-32 Score=216.88 Aligned_cols=166 Identities=21% Similarity=0.193 Sum_probs=140.4
Q ss_pred CCCCCcccccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCccc
Q 040622 2 EGNNGPEALLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSLT 81 (235)
Q Consensus 2 hg~~~~~~~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~ 81 (235)
|||+.+|.-...|..|+|||+.|++||+.+++.|+. .+++.|||||+.||+|||.++++.++.
T Consensus 6 Hg~t~~n~~~~~g~~d~~Lt~~G~~qa~~l~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~~------------- 68 (177)
T TIGR03162 6 HGETDVNAGLCYGQTDVPLAEKGAEQAAALREKLAD----VPFDAVYSSPLSRCRELAEILAERRGL------------- 68 (177)
T ss_pred CCCCccCCCceeCCCCCCcChhHHHHHHHHHHHhcC----CCCCEEEECchHHHHHHHHHHHhhcCC-------------
Confidence 999999864322778999999999999999999976 489999999999999999999876544
Q ss_pred ccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc-
Q 040622 82 ATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR- 155 (235)
Q Consensus 82 ~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~- 155 (235)
++.+.+.|+|+ +|.| + .++.+.+|. +..|..+ +..+.+|++|++.++..|+..+++.|.++
T Consensus 69 --------~~~~~~~L~E~~~G~~~g~~~~~~~~~~~~----~~~~~~~-~~~~~~~~gEs~~~~~~R~~~~~~~l~~~~ 135 (177)
T TIGR03162 69 --------PIIKDPRLREMDFGDWEGRSWDEIPEAYPE----LDAWAAD-WQHARPPGGESFADFYQRVSEFLEELLKAH 135 (177)
T ss_pred --------CceECCccccccCCccCCCCHHHHHHhCHH----HHHHHhC-cccCCCcCCCCHHHHHHHHHHHHHHHHHhC
Confidence 78889999999 9988 5 777777763 4556554 33467789999999999999999999876
Q ss_pred CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEE
Q 040622 156 QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSV 200 (235)
Q Consensus 156 ~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~ 200 (235)
.+++|||||||++|+++++++++.+...++ .+.+.||+|+.+
T Consensus 136 ~~~~vlvVsHg~~i~~l~~~~~~~~~~~~~---~~~~~n~~i~~l 177 (177)
T TIGR03162 136 EGDNVLIVTHGGVIRALLAHLLGLPLEQWW---SFDVEYGSITLI 177 (177)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCCCHHHHh---ccccCCeeEEeC
Confidence 578999999999999999999998776554 468999999864
No 6
>PRK01112 phosphoglyceromutase; Provisional
Probab=99.98 E-value=2.9e-31 Score=222.31 Aligned_cols=193 Identities=17% Similarity=0.136 Sum_probs=147.8
Q ss_pred CCCCCccc-ccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEA-LLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~-~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|. .+.+|+.|.|||+.|++||+.++++|.. .+++.|||||+.||+|||+++++.+.... ....+.+.-
T Consensus 9 HGqt~~n~~~~~~G~~D~~Lte~G~~Qa~~l~~~L~~----~~~d~iysSpl~Ra~qTA~~i~~~~~~~~-~~~~~~~~~ 83 (228)
T PRK01112 9 HGQSVWNAKNLFTGWVDIPLSQQGIAEAIAAGEKIKD----LPIDCIFTSTLVRSLMTALLAMTNHSSGK-IPYIVHEED 83 (228)
T ss_pred CCCCccccccccCCCCCCCcCHHHHHHHHHHHHHhhc----CCCCEEEEcCcHHHHHHHHHHHHhhcccc-ccccccccc
Confidence 99999986 4677889999999999999999999987 48999999999999999999875321000 000000000
Q ss_pred -------c---ccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHH
Q 040622 81 -------T---ATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARG 145 (235)
Q Consensus 81 -------~---~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~ 145 (235)
. ...... .++...+.|+|+ +|.| + .++.+.+|. .+..++.. +..+.+|+|||+.++..|+
T Consensus 84 ~~~~~~~~~~~~~~~~~-~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~---~~~~~w~~-~~~~~~p~GES~~d~~~Rv 158 (228)
T PRK01112 84 DKKWMSRIYSDEEPEQM-IPLFQSSALNERMYGELQGKNKAETAEKFGE---EQVKLWRR-SYKTAPPQGESLEDTGQRT 158 (228)
T ss_pred ccccccccccccccccC-CCeeecCccccccccccCCCCHHHHHHHCcH---HHHHHHhC-cCCCCCCCCCCHHHHHHHH
Confidence 0 000112 378889999999 9999 6 899998987 44433332 3346789999999999999
Q ss_pred HHHHHHHHhc---CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEeccc
Q 040622 146 IEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRSI 207 (235)
Q Consensus 146 ~~~~~~l~~~---~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~ 207 (235)
..+++.+..+ .+++|+|||||++|+++++.+++.+.+.+. .+.++||+++.++++..++
T Consensus 159 ~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 220 (228)
T PRK01112 159 LPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVL---SLELPTGKPIVYEWTGQKF 220 (228)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHh---hcccCCcceEEEEECCCCc
Confidence 9999976432 568999999999999999999999877654 4688999999999987654
No 7
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=3.2e-31 Score=222.05 Aligned_cols=179 Identities=18% Similarity=0.118 Sum_probs=143.3
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.- +.+|+.|.|||+.|++||+.+++.|.... .+++.|||||+.||+|||.++++..+.
T Consensus 8 HG~t~~n~~~~~~G~~d~~Lt~~G~~qa~~~~~~l~~~~--~~~d~i~sSpl~Ra~~TA~~i~~~~~~------------ 73 (227)
T PRK14118 8 HGFSEWNAKNLFTGWRDVNLTERGVEEAKAAGKKLKEAG--YEFDIAFTSVLTRAIKTCNIVLEESNQ------------ 73 (227)
T ss_pred cCCCccccccCcCCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEEeChHHHHHHHHHHHHhcCC------------
Confidence 999998854 67888999999999999999999998632 479999999999999999999764321
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCC-----------------------cCCcC
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDD-----------------------KLWKA 132 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~ 132 (235)
...++...+.|+|+ +|.| + +++.+.+|. ..+..|..+.+ ....+
T Consensus 74 ------~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (227)
T PRK14118 74 ------LWIPQVKNWRLNERHYGALQGLDKKATAEQYGD--EQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADVV 145 (227)
T ss_pred ------CCCCeecCCccccccCccccCCcHHHHHHHhhH--HHHHHHHhccccCCCccccccccccccchhhccCcCCCC
Confidence 01267788899999 9999 5 888888876 12333432110 01346
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh---cCCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 133 NTREPFEEVAARGIEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 133 ~~~Es~~e~~~R~~~~~~~l~~---~~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
|++||+.++.+|+..+++.+.. ..+++|||||||++|+++++++++.+...++ .+.++||+++.+.++++
T Consensus 146 p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~---~~~i~~~s~~~~~~~~~ 218 (227)
T PRK14118 146 PDAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADIM---DLEIPTGQPLVYKLDDN 218 (227)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHh---cccCCCCceEEEEECCC
Confidence 8999999999999999998764 2568999999999999999999998776543 46899999999999764
No 8
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=4.9e-31 Score=221.30 Aligned_cols=179 Identities=17% Similarity=0.108 Sum_probs=143.1
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.+|+.|+|||+.|++||+.+++.|.... .+++.|||||++||+|||.+++.....
T Consensus 9 HG~t~~n~~~~~qG~~D~~Lt~~G~~qa~~~~~~l~~~~--~~~~~i~sSpl~Ra~~TA~~i~~~~~~------------ 74 (230)
T PRK14117 9 HGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAG--IEFDLAFTSVLKRAIKTTNLALEASDQ------------ 74 (230)
T ss_pred CccccCcccCCcCCCCCCCcCHHHHHHHHHHHHHHHHcC--CCCCEEEECCcHHHHHHHHHHHHhccc------------
Confidence 999999964 77889999999999999999999998632 479999999999999999988642110
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccC-----------------------CcCCcC
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESED-----------------------DKLWKA 132 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~ 132 (235)
.+ .++...+.|+|+ +|.| + .++.+.||. ..+..|..+. .....+
T Consensus 75 -----~~-~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (230)
T PRK14117 75 -----LW-VPVEKSWRLNERHYGGLTGKNKAEAAEQFGD--EQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSVI 146 (230)
T ss_pred -----CC-CCceeCCccccccchhhcCCCHHHHHHHccH--HHHHHHhcccccCCCcccccccccccccccccccccCCC
Confidence 11 277888999999 9999 6 889888887 1133443210 011356
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-hc--CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 133 NTREPFEEVAARGIEFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 133 ~~~Es~~e~~~R~~~~~~~l~-~~--~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
|++||+.++.+|+..+++.+. .. .+++|||||||++|+++++++++.+...++ .+.++||+++.++++++
T Consensus 147 p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~---~~~~~n~s~~~i~~~~~ 219 (230)
T PRK14117 147 PDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIM---DVEIPNFPPLVFEFDEK 219 (230)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHHh---hcCCCCceEEEEEECCC
Confidence 899999999999999999975 22 357899999999999999999998776553 35799999999999654
No 9
>PRK01295 phosphoglyceromutase; Provisional
Probab=99.97 E-value=9.3e-31 Score=216.21 Aligned_cols=178 Identities=17% Similarity=0.143 Sum_probs=146.0
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.+|+.|+|||+.|++||+.++++|...+ .+++.|||||+.||+|||.+++..++.
T Consensus 10 HGet~~n~~~~~~G~~d~~Lt~~G~~qA~~~~~~L~~~~--~~~d~i~sSpl~Ra~qTA~~i~~~~~~------------ 75 (206)
T PRK01295 10 HGQSEWNLKNLFTGWRDPDLTEQGVAEAKAAGRKLKAAG--LKFDIAFTSALSRAQHTCQLILEELGQ------------ 75 (206)
T ss_pred CCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEeCCcHHHHHHHHHHHHHcCC------------
Confidence 999999854 67788999999999999999999998643 479999999999999999999876542
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHH-HHHHh
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFM-KWLWT 154 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~-~~l~~ 154 (235)
...++...+.|+|+ +|.| + +++.+.+|. .+..++.. +..+.+|++||+.++..|+..++ +.+..
T Consensus 76 ------~~~~~~~~~~L~E~~~G~~eg~~~~e~~~~~~~---~~~~~~~~-~~~~~~p~GES~~~~~~Rv~~~~~~~i~~ 145 (206)
T PRK01295 76 ------PGLETIRDQALNERDYGDLSGLNKDDARAKWGE---EQVHIWRR-SYDVPPPGGESLKDTGARVLPYYLQEILP 145 (206)
T ss_pred ------CCCCeEECCcccccccccccCCcHHHHHHHchH---HHHHHhhc-ccCCCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 11378899999999 9999 5 889888886 44433333 33577889999999999999974 55654
Q ss_pred c--CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 155 R--QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 155 ~--~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
. .+++|||||||++|+++++++++.+.+.++ .+.+.|+.+..+.++...
T Consensus 146 ~~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~ 196 (206)
T PRK01295 146 RVLRGERVLVAAHGNSLRALVMVLDGLTPEQIL---KLELATGVPIVYRLNADS 196 (206)
T ss_pred hccCCCeEEEEcChHHHHHHHHHHhCCCHHHHh---hcCCCCCCcEEEEecCCC
Confidence 2 568999999999999999999999877654 367889999998887653
No 10
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.97 E-value=7.3e-31 Score=216.38 Aligned_cols=171 Identities=18% Similarity=0.141 Sum_probs=138.8
Q ss_pred CCCCCcccc-cCCCCC-CCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCc
Q 040622 2 EGNNGPEAL-LSQEFF-DAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPS 79 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~-D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~ 79 (235)
|||+.+|.- +.+|.. |.|||+.|++||+.++++|.. .+++.|||||+.||+|||.++++.++.
T Consensus 7 HG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~~----------- 71 (204)
T TIGR03848 7 HGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLAD----LPIAAIVSSPLERCRETAEPIAEARGL----------- 71 (204)
T ss_pred CCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHhc----CCCCEEEeCcHHHHHHHHHHHHHhcCC-----------
Confidence 999998853 455666 599999999999999999986 489999999999999999999875543
Q ss_pred ccccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHh
Q 040622 80 LTATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWT 154 (235)
Q Consensus 80 ~~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~ 154 (235)
++.+.+.|+|+ +|.| + .++.+. . .+..|... +..+.+|++||+.++..|+..+++.+.+
T Consensus 72 ----------~~~~~~~L~E~~~G~~eG~~~~e~~~~--~---~~~~~~~~-~~~~~~p~gEs~~~~~~R~~~~l~~~~~ 135 (204)
T TIGR03848 72 ----------PPRVDERLGECDYGDWTGRELKELAKE--P---LWPVVQAH-PSAAVFPGGESLAQVQARAVAAVREHDA 135 (204)
T ss_pred ----------CceECcccccCCCCeeCCcCHHHHhCc--H---HHHHHhcC-cccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 78899999999 9998 3 555321 1 24444433 2235578999999999999999998875
Q ss_pred c------CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 155 R------QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 155 ~------~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
+ .+++|||||||++|+++++++++.+...++ .+.++||+++.+.+.++.
T Consensus 136 ~~~~~~~~~~~vliVsHg~~ir~ll~~~lg~~~~~~~---~~~~~n~sit~l~~~~~~ 190 (204)
T TIGR03848 136 RLAAEHGPDAVWVACSHGDVIKSVLADALGMHLDLFQ---RIVVDPCSVSVVRYTPLR 190 (204)
T ss_pred HhhhccCCCCEEEEEeCChHHHHHHHHHhCCCHHHhh---eeeeCCCeEEEEEEeCCc
Confidence 3 457899999999999999999998776543 358999999999997653
No 11
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.97 E-value=1.1e-30 Score=217.04 Aligned_cols=171 Identities=23% Similarity=0.124 Sum_probs=138.5
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.++..|+|||+.|++||+.++++|.. .+++.|||||+.||+|||+++++.++.
T Consensus 9 HG~t~~n~~~~~~g~~d~~Lt~~G~~qA~~~~~~l~~----~~~~~I~sSpl~Ra~qTA~~i~~~~~~------------ 72 (215)
T PRK03482 9 HGETQWNAERRIQGQSDSPLTAKGEQQAMQVAERAKE----LGITHIISSDLGRTRRTAEIIAQACGC------------ 72 (215)
T ss_pred CCCcccccccccCCCCCCCcCHHHHHHHHHHHHHHhc----CCCCEEEECCcHHHHHHHHHHHHhcCC------------
Confidence 999988854 556778999999999999999999987 479999999999999999999876543
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccc-cccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHh
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEA-SIESEDDKLWKANTREPFEEVAARGIEFMKWLWT 154 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~ 154 (235)
++.+.+.|+|+ +|.| + +++...++. +. .+... +..+.+|++|++.++..|+..+++.+..
T Consensus 73 ---------~~~~~~~L~E~~~G~~eg~~~~~~~~~~~~----~~~~~~~~-~~~~~~p~gEs~~~~~~Rv~~~l~~~~~ 138 (215)
T PRK03482 73 ---------DIIFDPRLRELNMGVLEKRHIDSLTEEEEG----WRRQLVNG-TVDGRIPEGESMQELSDRMHAALESCLE 138 (215)
T ss_pred ---------CeeEChhccccCCccccCCcHHHHHhhHHH----HHHhhhcC-CCccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 78899999999 9998 3 554333222 11 11111 2235678999999999999999999876
Q ss_pred c-CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 155 R-QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 155 ~-~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
. .+++|||||||++|+++++++++.+...++ .+.+.||+++.+.++.+
T Consensus 139 ~~~~~~vliVsHg~~i~~l~~~l~~~~~~~~~---~~~~~n~sis~~~~~~~ 187 (215)
T PRK03482 139 LPQGSRPLLVSHGIALGCLVSTILGLPAWAER---RLRLRNCSISRVDYQES 187 (215)
T ss_pred hCCCCeEEEEeCcHHHHHHHHHHhCCChhhhh---ccCCCCcEEEEEEEeCC
Confidence 4 457899999999999999999998776543 46899999999998764
No 12
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.97 E-value=1.3e-30 Score=220.60 Aligned_cols=179 Identities=17% Similarity=0.123 Sum_probs=143.9
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.+|+.|+|||+.|++||+.++++|...+ .+++.|||||++||+|||.+++..++.
T Consensus 8 HGqt~~n~~~~~~G~~D~~Lt~~G~~QA~~la~~L~~~~--~~~d~iysSpl~Ra~qTA~ii~~~~~~------------ 73 (245)
T TIGR01258 8 HGESEWNALNLFTGWVDVKLSEKGQQEAKRAGELLKEEG--YEFDVAYTSLLKRAIHTLNIALDELDQ------------ 73 (245)
T ss_pred CCCcCccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEEcChHHHHHHHHHHHHhcCC------------
Confidence 999999864 67788999999999999999999998643 478999999999999999999865431
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccC-----------------CcCC------cC
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESED-----------------DKLW------KA 132 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~-----------------~~~~------~~ 132 (235)
...++...+.|+|+ +|.| + +++.+.||. ..+..|..+. +..| .+
T Consensus 74 ------~~~~i~~~~~L~E~~~G~~eG~~~~ei~~~~p~--~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~~ 145 (245)
T TIGR01258 74 ------LWIPVKKSWRLNERHYGALQGLNKAETAAKYGE--EQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKVL 145 (245)
T ss_pred ------CCCCeeeCcccccccCCCCcCCCHHHHHHHhhH--HHHHHHHhhccCCCCcCCcccccccccChhhhcCCcccC
Confidence 11267788999999 9999 5 888888886 1233443210 1112 25
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhc---CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 133 NTREPFEEVAARGIEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 133 ~~~Es~~e~~~R~~~~~~~l~~~---~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
|++||+.++..|+..+++.+... .+++|||||||++|+++++++++.+...++ .+.++||+++.++++++
T Consensus 146 p~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~ 218 (245)
T TIGR01258 146 PLTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEIL---ELNIPTGIPLVYELDEN 218 (245)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHh---heecCCCceEEEEECCC
Confidence 79999999999999999998642 567999999999999999999998776543 46789999999999665
No 13
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=7.1e-30 Score=216.33 Aligned_cols=179 Identities=16% Similarity=0.101 Sum_probs=142.9
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.+|+.|.|||+.|++||+.+++.|...+ ..++.|||||+.||+|||.++++..+.
T Consensus 12 HGqt~~n~~~~~~G~~D~pLTe~G~~QA~~~a~~l~~~~--~~~~~IysSpl~Ra~qTA~~i~~~~~~------------ 77 (249)
T PRK14120 12 HGESEWNAKNLFTGWVDVDLTEKGEAEAKRGGELLAEAG--VLPDVVYTSLLRRAIRTANLALDAADR------------ 77 (249)
T ss_pred CCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEecChHHHHHHHHHHHHhccc------------
Confidence 999998864 66788999999999999999999998642 368999999999999999999753221
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCC-----------------cCC----cCCC
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDD-----------------KLW----KANT 134 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~-----------------~~~----~~~~ 134 (235)
...++..++.|+|+ +|.| + .++.+.||. ..+..|..+.. ..+ .+|+
T Consensus 78 ------~~~~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~--~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p~ 149 (249)
T PRK14120 78 ------LWIPVRRSWRLNERHYGALQGKDKAETKAEYGE--EQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGPR 149 (249)
T ss_pred ------CCCCeEECCCcccccccccCCCCHHHHHHHccH--HHHHHHHhccccCCCccccccccccccCccccccCCCCC
Confidence 11378889999999 9999 6 888888875 12444443210 011 1479
Q ss_pred CCCHHHHHHHHHHHHHHHH-h--cCCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 135 REPFEEVAARGIEFMKWLW-T--RQEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 135 ~Es~~e~~~R~~~~~~~l~-~--~~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
+||+.++..|+..+++.+. + ..+++|||||||++|+++++++++.+...++ .+.++||+++.|.++++
T Consensus 150 GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~ 220 (249)
T PRK14120 150 TECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIA---GLNIPTGIPLVYELDED 220 (249)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhh---eeccCCCceEEEEECCC
Confidence 9999999999999999853 2 2568899999999999999999999876553 46899999999999764
No 14
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.97 E-value=6.1e-30 Score=211.25 Aligned_cols=175 Identities=23% Similarity=0.202 Sum_probs=149.9
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.+|+.|+|||+.|++||+.+++.|.... .+++.|||||+.||+|||.++++.++.
T Consensus 10 HGqt~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~--~~~~~i~sS~l~Ra~~TA~~~a~~~~~------------ 75 (208)
T COG0406 10 HGETEWNVEGRLQGWTDSPLTEEGRAQAEALAERLAARD--IGFDAIYSSPLKRAQQTAEPLAEELGL------------ 75 (208)
T ss_pred cCCccccccccccCCCCCCCCHHHHHHHHHHHHHHhhcC--CCCCEEEECchHHHHHHHHHHHHhcCC------------
Confidence 999999853 66668999999999999999999999532 589999999999999999999987665
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR 155 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~ 155 (235)
++...+.|+|+ +|.| + .++.+.+|. .+..|..+ +..+.++++|++.++..|+..++..+...
T Consensus 76 ---------~~~~~~~l~E~~~G~~eg~~~~e~~~~~p~---~~~~~~~~-~~~~~~~~gEs~~~~~~R~~~~~~~~~~~ 142 (208)
T COG0406 76 ---------PLEVDDRLREIDFGDWEGLTIDELAEEPPE---ELAAWLAD-PYLAPPPGGESLADVSKRVVAALAELLRS 142 (208)
T ss_pred ---------CceecCCeeEeecccccCCcHHHHHHhCHH---HHHHHhcC-ccccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 58899999999 9999 5 899999988 67777654 33556667999999999999999999886
Q ss_pred CC-CeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 156 QE-KEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 156 ~~-~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
.. ++|||||||++|+++++++++.+.... ....++||+++.+.++.+.
T Consensus 143 ~~~~~vlvVsHg~~ir~l~~~~~~~~~~~~---~~~~~~~~si~~l~~~~~~ 191 (208)
T COG0406 143 PPGNNVLVVSHGGVIRALLAYLLGLDLEEL---WRLRLDNASVTVLEFDDGR 191 (208)
T ss_pred cCCCeEEEEEChHHHHHHHHHhcCCChhhH---HhcCCCCceEEEEEeeCCC
Confidence 33 379999999999999999999875422 3478999999999999875
No 15
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=8.5e-30 Score=215.76 Aligned_cols=180 Identities=16% Similarity=0.088 Sum_probs=144.2
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.. +.+|..|.|||+.|++||+.++++|...+ .+++.|||||++||+|||.++++.++.
T Consensus 8 HGqt~~n~~~~~~G~~D~pLte~G~~QA~~la~~L~~~~--~~~d~IysSpl~Ra~qTA~~i~~~~~~------------ 73 (247)
T PRK14115 8 HGESQWNKENRFTGWTDVDLSEKGVSEAKAAGKLLKEEG--YTFDVAYTSVLKRAIRTLWIVLDELDQ------------ 73 (247)
T ss_pred CCCcccccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEEcCCHHHHHHHHHHHHHcCC------------
Confidence 999999864 67788899999999999999999998643 478999999999999999999765431
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccC-----------------Cc------CCcC
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESED-----------------DK------LWKA 132 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~-----------------~~------~~~~ 132 (235)
...++...+.|+|+ +|.| + +++.+.+|. ..+..|..+. ++ ...+
T Consensus 74 ------~~~~~~~~~~L~E~~fG~~eG~~~~ei~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (247)
T PRK14115 74 ------MWLPVEKSWRLNERHYGALQGLNKAETAAKYGD--EQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEEL 145 (247)
T ss_pred ------CCCCceECccccccccccccCCCHHHHHHHhhH--HHHHHHhcccccCCCcccccccccccccchhhcccCCCC
Confidence 11267889999999 9999 5 888888776 1233443210 11 1236
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh---cCCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 133 NTREPFEEVAARGIEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 133 ~~~Es~~e~~~R~~~~~~~l~~---~~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
|++||+.++..|+..+++.+.. ..+++|||||||++|+++++++++.+...++ .+.++||+++.+.++++.
T Consensus 146 p~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~---~~~~~~~~~~~l~~~~~~ 219 (247)
T PRK14115 146 PLTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEIL---ELNIPTGVPLVYELDENL 219 (247)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHhh---eeecCCCceEEEEECCCC
Confidence 7999999999999999998753 2568999999999999999999998766543 468999999999998764
No 16
>PRK13462 acid phosphatase; Provisional
Probab=99.97 E-value=1.2e-29 Score=209.05 Aligned_cols=163 Identities=16% Similarity=0.059 Sum_probs=135.6
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCcc--EEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCC
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKID--LVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHP 78 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~--~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~ 78 (235)
|||+.+|.. +.+|..|.|||+.|++||+.+++.|... +++ .|||||+.||+|||+++. .
T Consensus 13 HG~t~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~----~~~~~~i~sSpl~Ra~qTA~~i~----~---------- 74 (203)
T PRK13462 13 HGETEWSKSGRHTGRTELELTETGRTQAELAGQALGEL----ELDDPLVISSPRRRALDTAKLAG----L---------- 74 (203)
T ss_pred CCCCCcccCCCccCCCCCCCCHHHHHHHHHHHHHHHhC----CCCCCEEEECchHHHHHHHHHhc----C----------
Confidence 999999854 6778899999999999999999999874 555 799999999999999871 1
Q ss_pred cccccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHH
Q 040622 79 SLTATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLW 153 (235)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~ 153 (235)
+.+...+.|+|+ +|.| + .++.+.+|. +..|. ...|++||+.++..|+..+++.+.
T Consensus 75 ----------~~~~~~~~LrE~~~G~~eG~~~~ei~~~~~~----~~~~~------~~~p~gES~~~~~~Rv~~~l~~i~ 134 (203)
T PRK13462 75 ----------TVDEVSGLLAEWDYGSYEGLTTPQIRESEPD----WLVWT------HGCPGGESVAQVNERADRAVALAL 134 (203)
T ss_pred ----------cccccCccccccCCccccCCcHHHHHHhCch----HHhhc------CCCCCCccHHHHHHHHHHHHHHHH
Confidence 122568899999 9999 5 888888775 22342 123689999999999999999987
Q ss_pred hc-CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 154 TR-QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 154 ~~-~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
++ .+++|||||||++|+++++++++.+...++ .+.++||+++.+++.++
T Consensus 135 ~~~~~~~vliVsHg~vir~ll~~~l~~~~~~~~---~~~~~~~s~s~~~~~~~ 184 (203)
T PRK13462 135 EHMESRDVVFVSHGHFSRAVITRWVELPLAEGS---RFAMPTASIAICGFEHG 184 (203)
T ss_pred HhCCCCCEEEEeCCHHHHHHHHHHhCCCHHHhh---hcccCCceEEEEEeeCC
Confidence 65 567899999999999999999998765543 46899999999999765
No 17
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.96 E-value=7.3e-29 Score=221.89 Aligned_cols=172 Identities=17% Similarity=0.107 Sum_probs=148.1
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.- +.++..|+|||+.|++||+.+++.|... .+++.|||||+.||+|||.+++..++.
T Consensus 179 HGet~~n~~~~~~g~~D~~Lt~~G~~QA~~l~~~l~~~---~~~d~i~sSpl~Ra~qTA~~i~~~~~~------------ 243 (372)
T PRK07238 179 HGQTELSVQRRYSGRGNPELTEVGRRQAAAAARYLAAR---GGIDAVVSSPLQRARDTAAAAAKALGL------------ 243 (372)
T ss_pred CCCCCcccCCeeeCCCCCCcCHHHHHHHHHHHHHHhcc---CCCCEEEECChHHHHHHHHHHHHhcCC------------
Confidence 999998854 5667789999999999999999999873 279999999999999999999876544
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR 155 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~ 155 (235)
++.+.+.|+|+ +|.| + +++.+.||. .+..|..+. .+.+|++|++.++..|+..+++.|...
T Consensus 244 ---------~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~---~~~~w~~~~--~~~~p~gEs~~~~~~Rv~~~l~~l~~~ 309 (372)
T PRK07238 244 ---------DVTVDDDLIETDFGAWEGLTFAEAAERDPE---LHRAWLADT--SVAPPGGESFDAVARRVRRARDRLIAE 309 (372)
T ss_pred ---------CcEECccceeCCCCccCCCCHHHHHHHCHH---HHHHHHhCC--CCCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 78889999999 9998 5 888888887 777787652 477889999999999999999999764
Q ss_pred -CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 156 -QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 156 -~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
.+++|+|||||++|+++++++++.+...+ +.+.++||+++.+.+..+
T Consensus 310 ~~~~~vlvVtHg~~ir~ll~~~l~~~~~~~---~~~~~~~~~~s~l~~~~~ 357 (372)
T PRK07238 310 YPGATVLVVSHVTPIKTLLRLALDAGPGVL---YRLHLDLASLSIAEFYPD 357 (372)
T ss_pred CCCCeEEEEEChHHHHHHHHHHhCCCHHHh---hhcccCCceEEEEEEECC
Confidence 56789999999999999999999876654 346889999999999654
No 18
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.96 E-value=1.5e-28 Score=206.95 Aligned_cols=170 Identities=18% Similarity=0.107 Sum_probs=135.6
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcccccccCCCCC
Q 040622 11 LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSLTATATVNCPP 90 (235)
Q Consensus 11 ~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (235)
+.+|+.|+|||+.|++||+.+++.|...+ .+++.|||||+.||+|||.++++.++. ...+
T Consensus 6 ~~qG~~D~pLTe~G~~QA~~l~~~L~~~~--~~~d~iysSpl~Ra~qTA~~i~~~~~~------------------~~~~ 65 (236)
T PTZ00123 6 RFTGWTDVPLSEKGVQEAREAGKLLKEKG--FRFDVVYTSVLKRAIKTAWIVLEELGQ------------------LHVP 65 (236)
T ss_pred ceeCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHHHHHHHHHHHhcCC------------------CCCC
Confidence 56788999999999999999999998644 479999999999999999999875431 1126
Q ss_pred EEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCC-----------------------cCCcCCCCCCHHHHH
Q 040622 91 IVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDD-----------------------KLWKANTREPFEEVA 142 (235)
Q Consensus 91 i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~Es~~e~~ 142 (235)
+...+.|+|+ +|.| + +++.+.+|. ..+..|..+.. ....+|++||+.++.
T Consensus 66 ~~~~~~L~E~~~G~~EG~~~~ei~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~ 143 (236)
T PTZ00123 66 VIKSWRLNERHYGALQGLNKSETAEKHGE--EQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTV 143 (236)
T ss_pred ceeCchhhhcccccccCCCHHHHHHHccH--HHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHH
Confidence 7788999999 9999 5 888888876 11222321100 012347899999999
Q ss_pred HHHHHHHHHHHh---cCCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 143 ARGIEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 143 ~R~~~~~~~l~~---~~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
.|+..+++.+.. ..+++|||||||++|+++++++++.+...+. ...++||+++.|+++++
T Consensus 144 ~Rv~~~l~~li~~~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~~---~~~~~n~~~~~~~~~~~ 206 (236)
T PTZ00123 144 ERVLPYWEDHIAPDILAGKKVLVAAHGNSLRALVKYLDKMSEEDIL---ELNIPTGVPLVYELDEN 206 (236)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHHh---hccCCCCceEEEEECCC
Confidence 999999998643 2567999999999999999999998876543 46899999999999876
No 19
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2e-26 Score=185.03 Aligned_cols=193 Identities=42% Similarity=0.636 Sum_probs=161.3
Q ss_pred CCCCcccccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcccc
Q 040622 3 GNNGPEALLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSLTA 82 (235)
Q Consensus 3 g~~~~~~~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~ 82 (235)
|+-+++++.+..++|+.||+.|++|+..|++.+...++...++.|+||||+||+||+.+.+.....
T Consensus 31 g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~~~~~-------------- 96 (248)
T KOG4754|consen 31 GEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFGGYLA-------------- 96 (248)
T ss_pred cccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhcceec--------------
Confidence 444556688888999999999999999999999888876779999999999999999999987654
Q ss_pred cccCCCCCEEecCCc----ccccc--CC----C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHH
Q 040622 83 TATVNCPPIVAVELC----RERLV--PA----S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKW 151 (235)
Q Consensus 83 ~~~~~~~~i~~~~~l----~E~~G--~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~ 151 (235)
......+++.+.|.+ ||.+| +| + .++.+.||. ++|+....+.+..|.+-+.|+.++...|.+.++++
T Consensus 97 e~g~~~~p~~vsp~~i~~~rE~lG~hpCD~r~~v~~~~~lfp~--~DFs~~~~dv~~~~~pdy~ed~e~~a~r~re~~~~ 174 (248)
T KOG4754|consen 97 EDGEDPAPVKVSPPFIAVCRETLGDHPCDRRSSVTDLMKLFPA--YDFSLCETDVDPLKKPDYREDDEESAARSREFLEW 174 (248)
T ss_pred cCCCcCCceeecchHHHHHHHHhCCCcccccchhHHHHhhccc--ccceeeccCcchhccCcchhhHHHHHHhHHHHHHH
Confidence 222233366666666 99888 45 4 889999999 89999888888889999999999999999999999
Q ss_pred HHhcCCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEeccccCCCC
Q 040622 152 LWTRQEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRSITGSCY 212 (235)
Q Consensus 152 l~~~~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~~~~~ 212 (235)
+.+++.+.|.||||++.|+.++..+......++.... ..+.||+...+.+.+..-.+++.
T Consensus 175 l~~r~ek~iavvths~fl~~llk~i~k~cd~dv~~~~-~~~~Nce~r~~~i~Dr~~~~~d~ 234 (248)
T KOG4754|consen 175 LAKRPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPEI-LSFSNCEHRSFVIVDRGMLGTDS 234 (248)
T ss_pred HHhCccceEEEEEehHHHHHHHHHhccccCcccchhh-hccCCCcCCceeEeeeeeecccc
Confidence 9999999999999999999999998877665543322 34589999999888887767664
No 20
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.94 E-value=4.6e-27 Score=184.56 Aligned_cols=144 Identities=25% Similarity=0.273 Sum_probs=120.3
Q ss_pred CCCCCccc-ccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEA-LLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~-~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
||++.+|. ....+..|+|||+.|+.||+.+++.|...+ .+++.|||||+.||+|||.++++.++.
T Consensus 7 Hg~~~~n~~~~~~~~~d~~Lt~~G~~qA~~~~~~l~~~~--~~~~~i~~Sp~~R~~qTA~~~~~~~~~------------ 72 (158)
T PF00300_consen 7 HGESEFNAEGRVQGDSDPPLTERGREQARQLGEYLAERD--IQIDVIYSSPLRRCIQTAEIIAEGLGI------------ 72 (158)
T ss_dssp -S-BHHHHTTBCGTTSSTGBEHHHHHHHHHHHHHHHHTT--SSCSEEEEESSHHHHHHHHHHHHHHTS------------
T ss_pred CCccccccCCCcCCCCCccccHHHHHHHHhhcccccccc--cCceEEecCCcchhhhhhchhhccccc------------
Confidence 99998875 366777788999999999999999998433 689999999999999999999875443
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHH--
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLW-- 153 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~-- 153 (235)
++.+.+.|+|+ +|.| + .++.+.++. .+..|... +..+.++++|++.++..|+..+++.|.
T Consensus 73 ---------~~~~~~~l~E~~~g~~~g~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~Es~~~~~~R~~~~~~~l~~~ 139 (158)
T PF00300_consen 73 ---------EIIVDPRLREIDFGDWEGRPFDEIEEKFPD---EFEAWWSD-PYFYRPPGGESWEDFQQRVKQFLDELIAY 139 (158)
T ss_dssp ---------EEEEEGGGSCCGCGGGTTSBHHHHHHHHHH---HHHHHHHH-TSSCGSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------ccccccccccccchhhcccchhhHHhhhhc---ccchhhcc-ccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999998 8767 5 788888875 56666654 446778899999999999999999999
Q ss_pred hcCCCeEEEEechHHHHHH
Q 040622 154 TRQEKEIAVVSHGIFLQQT 172 (235)
Q Consensus 154 ~~~~~~ilIVsHg~~i~~l 172 (235)
...+++|+|||||++|++|
T Consensus 140 ~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 140 KRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp HHTTSEEEEEE-HHHHHHH
T ss_pred hCCCCEEEEEecHHHHHhC
Confidence 4688999999999999985
No 21
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.93 E-value=1.2e-25 Score=214.26 Aligned_cols=189 Identities=14% Similarity=0.036 Sum_probs=142.3
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.- +.+| |+|||+.|++||+.++++|.... ...++.|||||++||+|||.++.+.............+.
T Consensus 427 HGeT~~n~~~r~~G--d~pLt~~G~~qA~~l~~~l~~~~-~~~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~~~~~a~~~- 502 (664)
T PTZ00322 427 AGEYVDLLSGRIGG--NSRLTERGRAYSRALFEYFQKEI-STTSFTVMSSCAKRCTETVHYFAEESILQQSTASAASSQ- 502 (664)
T ss_pred cccchhhhcCccCC--CCccCHHHHHHHHHHHHHHHhcc-CCCCcEEEcCCcHHHHHHHHHHHhccccccccccccccc-
Confidence 999999854 3344 89999999999999999998631 024679999999999999999865310000000000000
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHH-HHHHHHHHHHHh
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVA-ARGIEFMKWLWT 154 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~-~R~~~~~~~l~~ 154 (235)
....+. ++...+.|+|+ +|.| + +++.+.||. .+..|..+ +..+.+|+|||+.++. .|+..++++|..
T Consensus 503 --~~~~~~-~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~---~~~~~~~d-~~~~~~P~GES~~d~~~~R~~~~i~~l~~ 575 (664)
T PTZ00322 503 --SPSLNC-RVLYFPTLDDINHGDCEGQLLSDVRRTMPN---TLQSMKAD-PYYTAWPNGECIHQVFNARLEPHIHDIQA 575 (664)
T ss_pred --cccccc-cccchhhhCcCCCcccCCCCHHHHHHhCcH---HHHHHHhC-CCcCCCCCCcCHHHHHHHHHHHHHHHHHc
Confidence 011222 67788999999 9999 6 999999998 88888776 4457788999999976 799999999954
Q ss_pred cCCCeEEEEechHHHHHHHHHHhcc-----chhhhhcccCCCccccceEEEEEEec
Q 040622 155 RQEKEIAVVSHGIFLQQTLNALLND-----CQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 155 ~~~~~ilIVsHg~~i~~l~~~~~~~-----~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
..++|||||||++|+++++++++. +.+.+ +...+++++++.+.+.+.
T Consensus 576 -~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~---~~~~i~~~~~~~i~~~~~ 627 (664)
T PTZ00322 576 -STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNA---YKIDIPFEHVIKIRMVGF 627 (664)
T ss_pred -cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccC---ceeeccCCcEEEEEEecc
Confidence 457899999999999999999985 33332 346789999999988754
No 22
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.93 E-value=2.6e-25 Score=175.39 Aligned_cols=140 Identities=21% Similarity=0.205 Sum_probs=112.4
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
||++.+|.. ...+..|.|||+.|++||+.++++|.... ..+++.|||||+.||+|||+++++.++.
T Consensus 7 HG~s~~n~~~~~~g~~d~~Lt~~G~~qa~~~a~~l~~~~-~~~~~~i~sSpl~Ra~qTa~~i~~~~~~------------ 73 (155)
T smart00855 7 HGETEANREGRLTGWTDSPLTELGRAQAEALGELLASLG-RLRFDVIYSSPLLRARETAEALAIALGL------------ 73 (155)
T ss_pred CCCCcccccCeEcCCCCCCCCHHHHHHHHHHHHHHHhcc-CCCCCEEEeCchHHHHHHHHHHHHhcCC------------
Confidence 999988743 33355899999999999999999998630 0389999999999999999999876543
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR 155 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~ 155 (235)
+ ...+.|+|+ +|.| + .++...++. .+..| ..+.+|++|++.++..|+..+++.+..+
T Consensus 74 ---------~-~~~~~L~E~~~G~~~g~~~~~~~~~~~~---~~~~~-----~~~~~~~gEs~~~~~~Rv~~~~~~i~~~ 135 (155)
T smart00855 74 ---------G-EVDPRLRERDYGAWEGLTKEEERAKAWT---RPADW-----LGAAPPGGESLADVVERLVRALEELIAT 135 (155)
T ss_pred ---------C-CCChhhhhcccceecCCcHHHHHHHHHH---HHhcc-----CCCCCcCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 277899999 9988 4 677666665 33333 2356789999999999999999999764
Q ss_pred ---CCCeEEEEechHHHHHH
Q 040622 156 ---QEKEIAVVSHGIFLQQT 172 (235)
Q Consensus 156 ---~~~~ilIVsHg~~i~~l 172 (235)
.+++|||||||++|+++
T Consensus 136 ~~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 136 HDKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred cccCCCeEEEEECCcccccC
Confidence 56789999999999863
No 23
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.8e-24 Score=177.10 Aligned_cols=181 Identities=17% Similarity=0.115 Sum_probs=145.5
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||+.+|.- +-+|+.|.+||+.|.+||..++++|...+ ..++.+|||+++||+|||..+++..+.
T Consensus 13 HGes~wN~e~~~~G~~D~~Lte~G~~qA~~~~~~l~~~~--~~~~~~~tS~l~RakqT~~~il~~~~~------------ 78 (214)
T KOG0235|consen 13 HGESEWNKENIFQGWIDAPLTEKGEEQAKAAAQRLKDLN--IEFDVCYTSDLKRAKQTAELILEELKQ------------ 78 (214)
T ss_pred cCchhhhhhCcccccccCccChhhHHHHHHHHHHHHhcC--CcccEEecCHHHHHHHHHHHHHHhhcc------------
Confidence 999999974 89999999999999999999999999875 568888999999999999999886542
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHh-
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWT- 154 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~- 154 (235)
...|+....+|+|+ ||.+ + .++.+.++.... +..+.....+.-.+|.+|+..++..|+..++++...
T Consensus 79 ------~~~pv~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~-~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i~~ 151 (214)
T KOG0235|consen 79 ------KKVPVLYTWRLNERHYGDLQGLNKRETAKRYGEEQV-YEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEIAK 151 (214)
T ss_pred ------CCcceEechhhchhhhccccCccHHHHHHHcchhcc-ccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhhhh
Confidence 22489999999998 9988 6 899999987211 344433322345578999999999999999997664
Q ss_pred --cCCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 155 --RQEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 155 --~~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
..+++|+|++||..+|+++.++.+...+... ...++++=...+.++...
T Consensus 152 ~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i~---~~~~~t~vp~v~~ld~~~ 202 (214)
T KOG0235|consen 152 ESKEGKNVLIVAHGNSLRAIVKHLEGISDEAIK---ELNLPTGVPIVYELDKNK 202 (214)
T ss_pred hhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhhh---heecccCCceEEEccccc
Confidence 2678999999999999999999998766542 356666656666655543
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.90 E-value=8.8e-23 Score=177.11 Aligned_cols=157 Identities=18% Similarity=0.103 Sum_probs=117.0
Q ss_pred CCCCCcccccCCCCCCCC---CChhHHHHHHHHHHHHHHcCCC----CCccEEEEcchhHHHHHHHHhhcCCCCCCCCCC
Q 040622 2 EGNNGPEALLSQEFFDAQ---LSPLGWQQVDNLRKRAEASGLA----RKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGI 74 (235)
Q Consensus 2 hg~~~~~~~~~~~~~D~p---LS~~G~~Qa~~l~~~L~~~~~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 74 (235)
|||++.+. ..|.+ ||+.|++||+.+++.|...... .+++.|||||+.||+|||+++++.++.
T Consensus 110 HGq~~~~~-----~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~~~~------ 178 (299)
T PTZ00122 110 HGQYINES-----SNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEAFPG------ 178 (299)
T ss_pred CCCCCCCC-----CCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHhCCC------
Confidence 99977653 34555 9999999999999999873100 179999999999999999999765421
Q ss_pred CCCCcccccccCCCCCEEecCCccccccCCCHHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHh
Q 040622 75 DAHPSLTATATVNCPPIVAVELCRERLVPASSAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWT 154 (235)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~l~E~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~ 154 (235)
.++..++.|+|..- + .+. . . ...+.++++|+ .++..|+..+++.+..
T Consensus 179 --------------~~v~~d~~LrEG~~-~-------~~~---~---~----~~~~~~~gee~-~~~~~Rv~~al~~i~~ 225 (299)
T PTZ00122 179 --------------VRLIEDPNLAEGVP-C-------APD---P---P----SRGFKPTIEEI-LEDMKRIEAAFEKYFH 225 (299)
T ss_pred --------------CCceeCcccccCCc-c-------ccC---c---c----ccccCCCcchH-HHHHHHHHHHHHHHHH
Confidence 37888999999410 0 011 0 0 01233445555 6679999999999875
Q ss_pred cC----CCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 155 RQ----EKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 155 ~~----~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
+. ++.+||||||++|+.+++.+++.+...++ .+.++||+|+.+.++++
T Consensus 226 r~~~~~~~~vLVVsHGgvIR~ll~~lLglp~~~~~---~~~~~N~sit~l~~~~~ 277 (299)
T PTZ00122 226 RPVEDEDSVEIIVCHGNVIRYLVCRALQLPPEAWL---RLSLYNCGITWIVISSE 277 (299)
T ss_pred hcccCCCCeEEEEeCChHHHHHHHHHhCcCHHHHh---hccCCCceEEEEEEeCC
Confidence 42 35689999999999999999998876543 45789999999998753
No 25
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.1e-22 Score=164.05 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=148.9
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||..+|.. +-.||.|.+||+.|+.||...|+.|++.+ ..||.+|||-++||++|+.++.+..+.
T Consensus 9 HGqSeWN~~NlFtGW~Dv~LtekG~~EA~~ag~llk~~~--~~~dia~TS~L~RAi~T~~i~L~e~d~------------ 74 (230)
T COG0588 9 HGQSEWNKENLFTGWVDVDLTEKGISEAKAAGKLLKEEG--LEFDIAYTSVLKRAIKTLNIVLEESDQ------------ 74 (230)
T ss_pred cCchhhhhcCceeeeeecCcchhhHHHHHHHHHHHHHcC--CCcceeehHHHHHHHHHHHHHhhhhcc------------
Confidence 999999975 88999999999999999999999999987 789999999999999999999886532
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcC-----------------------
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKA----------------------- 132 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 132 (235)
.. .|+...-+|+|+ +|.+ + .+..+.|.. ..+..|..+.| -.|
T Consensus 75 -----~~-ipv~kswrLNERhYG~LqGlnK~~t~~kyGe--eqv~~wRRsyd--i~PP~~~~~~~~~~~~d~ry~~~~~~ 144 (230)
T COG0588 75 -----LW-IPVIKSWRLNERHYGALQGLNKAETAAKYGE--EQVLIWRRSYD--IPPPKLEKDDERSPHRDRRYAHLDIG 144 (230)
T ss_pred -----cC-cchhhHHHhhhhhhhhhhcCChHHHHHHHhH--HHHHHHHHhcC--CCCCCccccccccccccccccccccc
Confidence 22 355556689998 9987 6 888888877 34555655422 122
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHh---cCCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 133 --NTREPFEEVAARGIEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 133 --~~~Es~~e~~~R~~~~~~~l~~---~~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
|..|+..+...|+..+|...+. +.+++|+|++||..||+|+.++.+.+.+++. ...++++--.+++++.+.
T Consensus 145 ~~p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~---~l~IPtg~Plvyeld~~l 220 (230)
T COG0588 145 GLPLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDIL---DLNIPTGIPLVYELDKNL 220 (230)
T ss_pred CCCccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhh---hcccCCCCcEEEEECCCC
Confidence 2559999999999999997654 3789999999999999999999999888764 478999999999998875
No 26
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.87 E-value=3.5e-21 Score=151.12 Aligned_cols=135 Identities=28% Similarity=0.314 Sum_probs=108.3
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCC-CCCCCCCCCCCCc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGD-GQSQTDGIDAHPS 79 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~-~~~~~~~~~~~~~ 79 (235)
||++..+.. +..+..|.|||+.|++||+.++++|...+ .+++.|||||+.||+|||.++++.+ +.
T Consensus 7 Hg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~--~~~~~i~~Sp~~Ra~qTa~~l~~~~~~~----------- 73 (153)
T cd07067 7 HGESEWNAEGRFQGWTDVPLTEKGREQARALGKRLKELG--IKFDRIYSSPLKRAIQTAEIILEELPGL----------- 73 (153)
T ss_pred CCCCcccccCcccCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECcHHHHHHHHHHHHHhcCCC-----------
Confidence 999987754 45677899999999999999999998743 3799999999999999999997653 11
Q ss_pred ccccccCCCCCEEecCCccccccCCCHHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc-CCC
Q 040622 80 LTATATVNCPPIVAVELCRERLVPASSAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR-QEK 158 (235)
Q Consensus 80 ~~~~~~~~~~~i~~~~~l~E~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~-~~~ 158 (235)
++...+. +. | .|+..+++.+... .++
T Consensus 74 ----------~~~~~~~---------------------------------L~----e------~R~~~~~~~l~~~~~~~ 100 (153)
T cd07067 74 ----------PVEVDPR---------------------------------LR----E------ARVLPALEELIAPHDGK 100 (153)
T ss_pred ----------CceeCcc---------------------------------ch----H------HHHHHHHHHHHHhCCCC
Confidence 2222111 11 1 7899999998875 578
Q ss_pred eEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 159 EIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 159 ~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
+|+||||+++|+.+++++++.+...+ +.+.++||+++.+.+++.
T Consensus 101 ~iliV~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~s~~~~~~~~~ 144 (153)
T cd07067 101 NVLIVSHGGVLRALLAYLLGLSDEDI---LRLNLPNGSISVLELDEN 144 (153)
T ss_pred eEEEEeChHHHHHHHHHHhCCCHHHH---HhcCCCCceEEEEEEeCC
Confidence 99999999999999999999876554 246899999999999875
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.77 E-value=1e-17 Score=130.70 Aligned_cols=134 Identities=28% Similarity=0.309 Sum_probs=106.1
Q ss_pred CCCCCcccc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEAL-LSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~-~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
||++..+.. ...+..|.|||+.|++||+.+++.|.... .+++.|||||+.||+|||++++..+..
T Consensus 7 Hg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~l~~~l~~~~--~~~~~v~sSp~~R~~~Ta~~~~~~~~~------------ 72 (153)
T cd07040 7 HGEREPNAEGRFTGWGDGPLTEKGRQQARELGKALRERY--IKFDRIYSSPLKRAIQTAEIILEGLFE------------ 72 (153)
T ss_pred CCCCccccCCCccCCCCCCcCHHHHHHHHHHHHHHHHhC--CCCCEEEECChHHHHHHHHHHHHHhcC------------
Confidence 999988754 44678899999999999999999998842 379999999999999999999765310
Q ss_pred cccccCCCCCEEecCCccccccCCCHHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc---CC
Q 040622 81 TATATVNCPPIVAVELCRERLVPASSAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR---QE 157 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~---~~ 157 (235)
. +++.. . +. .|+..++..+... ..
T Consensus 73 ------~-~~~~~--------------------~------------~~--------------~r~~~~~~~~~~~~~~~~ 99 (153)
T cd07040 73 ------G-LPVEV--------------------D------------PR--------------ARVLNALLELLARHLLDG 99 (153)
T ss_pred ------C-CCeEE--------------------C------------HH--------------HHHHHHHHHHHHhhCCCC
Confidence 0 01111 0 00 8888889988775 57
Q ss_pred CeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 158 KEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 158 ~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
++|+||||+++|+.+++++++.+.... ....+++|++..+++...
T Consensus 100 ~~iliv~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (153)
T cd07040 100 KNVLIVSHGGTIRALLAALLGLSDEEI---LSLNLPNGSILVLELDEC 144 (153)
T ss_pred CEEEEEeCCHHHHHHHHHHhCcCHHHh---ccccCCCCceEEEEEcCC
Confidence 899999999999999999999875543 236789999999998764
No 28
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.71 E-value=3.4e-16 Score=123.38 Aligned_cols=134 Identities=17% Similarity=0.109 Sum_probs=96.7
Q ss_pred CCCCCcccccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCccc
Q 040622 2 EGNNGPEALLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSLT 81 (235)
Q Consensus 2 hg~~~~~~~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~ 81 (235)
||++.++.. +..|.|||+.|++||+.++++|...+ ..++.|||||+.||+|||+++++.++.
T Consensus 8 Hg~a~~~~~---~d~dr~Lt~~G~~qa~~~~~~l~~~~--~~~d~i~sSp~~Ra~qTa~~l~~~~~~------------- 69 (152)
T TIGR00249 8 HGDAALDAA---SDSVRPLTTNGCDESRLVAQWLKGQG--VEIERILVSPFVRAEQTAEIVGDCLNL------------- 69 (152)
T ss_pred CCCcccccC---CCCCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEECCcHHHHHHHHHHHHHcCC-------------
Confidence 899876654 56689999999999999999998754 478999999999999999999775432
Q ss_pred ccccCCCCCEEecCCccccccCCCHHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCeEE
Q 040622 82 ATATVNCPPIVAVELCRERLVPASSAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTRQEKEIA 161 (235)
Q Consensus 82 ~~~~~~~~~i~~~~~l~E~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~~~~~il 161 (235)
+ ..+.. .+. .+ | .++..+ +..++..+.....++++
T Consensus 70 -----~-~~~~~------------------~~~--------------l~--p-~~~~~~----~~~~l~~~~~~~~~~vl 104 (152)
T TIGR00249 70 -----P-SSAEV------------------LEG--------------LT--P-CGDIGL----VSDYLEALTNEGVASVL 104 (152)
T ss_pred -----C-cceEE------------------ccC--------------cC--C-CCCHHH----HHHHHHHHHhcCCCEEE
Confidence 0 01111 000 11 1 133333 44445555443457999
Q ss_pred EEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 162 VVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 162 IVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
||+|+..|..++.++++.... ..+++|++..++++..
T Consensus 105 iVgH~P~i~~l~~~l~~~~~~-------~~~~~~~~~~l~~~~~ 141 (152)
T TIGR00249 105 LVSHLPLVGYLVAELCPGENP-------IMFTTGAIASLLWDES 141 (152)
T ss_pred EEeCCCCHHHHHHHHhCCCCC-------CcCcceeEEEEEEecC
Confidence 999999999999999876321 3678999999999643
No 29
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.69 E-value=1.1e-15 Score=121.23 Aligned_cols=132 Identities=17% Similarity=0.104 Sum_probs=93.3
Q ss_pred CCCCCcccccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCccc
Q 040622 2 EGNNGPEALLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSLT 81 (235)
Q Consensus 2 hg~~~~~~~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~ 81 (235)
||++.++.. +-.|.|||+.|++||+.++++|...+ ..++.|||||+.||+|||.++++.++.
T Consensus 8 Hg~a~~~~~---~d~~rpLt~~G~~qa~~~~~~l~~~~--~~~d~i~sSp~~Ra~qTa~~l~~~~~~------------- 69 (159)
T PRK10848 8 HGDAALDAA---SDSVRPLTTCGCDESRLMANWLKGQK--VDIERVLVSPYLRAEQTLEVVGECLNL------------- 69 (159)
T ss_pred CCCCCCCCC---CCcCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEECCHHHHHHHHHHHHHHhCC-------------
Confidence 999987753 34577999999999999999998754 468999999999999999999765432
Q ss_pred ccccCCCCCEEecCCccccccCCCHHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCeEE
Q 040622 82 ATATVNCPPIVAVELCRERLVPASSAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTRQEKEIA 161 (235)
Q Consensus 82 ~~~~~~~~~i~~~~~l~E~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~~~~~il 161 (235)
.. ++...+.| +|. .+. ..+..++..+.....++|+
T Consensus 70 -----~~-~~~~~~~l--------------~~~---------------------~~~----~~~~~~l~~~~~~~~~~vl 104 (159)
T PRK10848 70 -----PA-SAEVLPEL--------------TPC---------------------GDV----GLVSAYLQALANEGVASVL 104 (159)
T ss_pred -----CC-ceEEccCC--------------CCC---------------------CCH----HHHHHHHHHHHhcCCCeEE
Confidence 00 11110000 011 111 2333445555444457999
Q ss_pred EEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEE
Q 040622 162 VVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIV 203 (235)
Q Consensus 162 IVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~ 203 (235)
||+|...|..++..+++.... ..+++|++..++++
T Consensus 105 lVgH~P~l~~l~~~L~~~~~~-------~~~~t~~i~~l~~~ 139 (159)
T PRK10848 105 VISHLPLVGYLVAELCPGETP-------PMFTTSAIACVTLD 139 (159)
T ss_pred EEeCcCcHHHHHHHHhCCCCC-------CCcCCceEEEEEec
Confidence 999999999999998875321 13789999999997
No 30
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1.2e-15 Score=128.61 Aligned_cols=141 Identities=20% Similarity=0.173 Sum_probs=106.6
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcccccccCCCCCEEecC
Q 040622 16 FDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSLTATATVNCPPIVAVE 95 (235)
Q Consensus 16 ~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 95 (235)
.|+|||..|..||+..|..|.+.+ ..++.||+||..||+|||..+.+.++..+.- .+.+.|
T Consensus 66 ~d~pit~~g~~~~~~~gr~l~~a~--~~i~~ifcSPs~r~VqTa~~i~~~~g~e~~~-----------------~i~veP 126 (272)
T KOG3734|consen 66 IDPPITVSGFIQCKLIGRELLNAG--IAIDVIFCSPSLRCVQTAAKIKKGLGIEKKL-----------------KIRVEP 126 (272)
T ss_pred cCCCccchhHHHHHHHHHHHHhcC--CCcceeecCCchhHHHHHHHHHHhhchhcCe-----------------eEEecc
Confidence 689999999999999999998876 6899999999999999999999988754433 555555
Q ss_pred Ccccc-----cc--CC--C-HHHHHhcCcCccccccccccCCcCC--cCCCCCCHHHHHHHHHHHHHHHHhc-CCCeEEE
Q 040622 96 LCRER-----LV--PA--S-SAACREFIHVTREEASIESEDDKLW--KANTREPFEEVAARGIEFMKWLWTR-QEKEIAV 162 (235)
Q Consensus 96 ~l~E~-----~G--~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Es~~e~~~R~~~~~~~l~~~-~~~~ilI 162 (235)
.|-|- .| ++ + .++...... +|... ++.| .+.++|+.+++..|+..+++.|+.+ ++++|||
T Consensus 127 gL~e~~~~~~~~~~p~~is~~el~~~~~~--VD~~y-----~P~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLI 199 (272)
T KOG3734|consen 127 GLFEPEKWPKDGKFPFFISPDELKFPGFP--VDLNY-----DPVYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLI 199 (272)
T ss_pred hhcchhhhcccCCCCCcCCHHHHhccCCC--ccccc-----chhhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 55552 12 11 3 444433332 22211 1112 2457899999999999999999986 6777999
Q ss_pred EechHHHHHHHHHHhccchh
Q 040622 163 VSHGIFLQQTLNALLNDCQA 182 (235)
Q Consensus 163 VsHg~~i~~l~~~~~~~~~~ 182 (235)
|+||..+..+.+.+.+.+..
T Consensus 200 V~H~~sv~~~~~~l~~~~~~ 219 (272)
T KOG3734|consen 200 VAHGSSVDTCSAQLQGLPVR 219 (272)
T ss_pred EeccchHHHHHHHhcCCCce
Confidence 99999999999999886543
No 31
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.63 E-value=3.6e-15 Score=132.63 Aligned_cols=165 Identities=18% Similarity=0.105 Sum_probs=130.0
Q ss_pred CCCCCcccccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCcc-EEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 040622 2 EGNNGPEALLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKID-LVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSL 80 (235)
Q Consensus 2 hg~~~~~~~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~-~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (235)
|||..+|.....+ .|++|++.|.+-|+.+.+++.... ..+ .||||++.||+|||..+.-
T Consensus 247 ~geS~~n~~grig-gds~ls~~g~~ya~~l~~f~~~~~---~~dl~vwts~~~rti~ta~~l~~---------------- 306 (438)
T KOG0234|consen 247 HGESEFNVEGRIG-GDSPLSERGSQYAKSLIKFVEEQS---SSDLDVWTSQRKRTIQTAEGLKL---------------- 306 (438)
T ss_pred cCCCccccccccC-CcccccHHHHHHHHHHHHHHhhhc---ccCceeccchHHHHhhhHhhcCc----------------
Confidence 8999888774443 399999999999999999998863 555 8999999999999994411
Q ss_pred cccccCCCCCEEecCCcccc-ccCC---C-HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc
Q 040622 81 TATATVNCPPIVAVELCRER-LVPA---S-SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR 155 (235)
Q Consensus 81 ~~~~~~~~~~i~~~~~l~E~-~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~ 155 (235)
+. .+..+..|+|+ .|.| + .++.+.||. ++..-..+ ...++.|++|++.|+..|+...+-.|..+
T Consensus 307 ------~~-~~~~~~~Ldei~ag~~~g~t~eeI~~~~p~---e~~~r~~d-ky~yry~~gESy~D~v~RlePvImElEr~ 375 (438)
T KOG0234|consen 307 ------DY-SVEQWKALDEIDAGVCEGLTYEEIETNYPE---EFALRDKD-KYRYRYPGGESYSDLVQRLEPVIMELERQ 375 (438)
T ss_pred ------ch-hhhhHhhcCcccccccccccHHHHHHhCch---hhhhccCC-cceeecCCCCCHHHHHHhhhhHhHhhhhc
Confidence 11 23567889999 8988 6 999999998 66554443 55688899999999999999999999653
Q ss_pred CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEE
Q 040622 156 QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVI 202 (235)
Q Consensus 156 ~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~ 202 (235)
.+|+|+||..+||+++.++++.+...... ..++--.|+.+++
T Consensus 376 --~~Vlvi~Hqavircll~Yf~~~~~~e~p~---l~~plhtv~~l~~ 417 (438)
T KOG0234|consen 376 --ENVLVITHQAVIRCLLAYFLNCSPVELPY---LTVPLHTVIKLTP 417 (438)
T ss_pred --ccEEEEecHHHHHHHHHHHhcCCHhhccc---ccccceeEEEEee
Confidence 34999999999999999999998665421 3444445555553
No 32
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.61 E-value=6e-15 Score=119.24 Aligned_cols=145 Identities=20% Similarity=0.234 Sum_probs=108.5
Q ss_pred CCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCcccccccCCCCCEEecCCcc
Q 040622 19 QLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSLTATATVNCPPIVAVELCR 98 (235)
Q Consensus 19 pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~ 98 (235)
.||+.|++||..+|++|.+.| .+++.|..|.|.||.+||.+|.++++. + ....-.+.|+
T Consensus 113 hLTelGReQAE~tGkRL~elg--lk~d~vv~StM~RA~ETadIIlk~l~d------------------~-lk~~s~~ll~ 171 (284)
T KOG4609|consen 113 HLTELGREQAELTGKRLAELG--LKFDKVVASTMVRATETADIILKHLPD------------------D-LKRVSCPLLR 171 (284)
T ss_pred hcchhhHHHHHHHhHHHHHcC--CchhhhhhhhhhhhHHHHHHHHHhCCC------------------c-cceecccccc
Confidence 899999999999999999988 799999999999999999999998763 1 1445566777
Q ss_pred ccccCCCHHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc------CCCeEEEEechHHHHHH
Q 040622 99 ERLVPASSAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR------QEKEIAVVSHGIFLQQT 172 (235)
Q Consensus 99 E~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~------~~~~ilIVsHg~~i~~l 172 (235)
|-.- ||.- -.... |++.. -.+..--.|+..++..+..+ .+...|||||+.+||.|
T Consensus 172 EGaP---------~ppd-Pp~k~--------wrp~~-~qy~rdgaRIEaafRryfhRA~p~QeedSy~liV~HaNVIRY~ 232 (284)
T KOG4609|consen 172 EGAP---------YPPD-PPVKH--------WRPLD-PQYYRDGARIEAAFRRYFHRASPSQEEDSYELIVCHANVIRYF 232 (284)
T ss_pred cCCC---------CCCC-CCccc--------CCccC-hHhhhcchHHHHHHHHHHhhcCcccccccEEEEEeecchhhhh
Confidence 7410 2220 01222 33211 12222337888888877653 45679999999999999
Q ss_pred HHHHhccchhhhhcccCCCccccceEEEEEEecc
Q 040622 173 LNALLNDCQASFNQELCPRFTNCEIRSVVIVDRS 206 (235)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 206 (235)
++..+..+++.+ ++..+.+|+|+-+.+...+
T Consensus 233 icRALq~PpegW---lR~nlnh~SiTWlti~PsG 263 (284)
T KOG4609|consen 233 ICRALQFPPEGW---LRMNLNHCSITWLTISPSG 263 (284)
T ss_pred hhhhhcCCcchh---heecccCcceEEEEEccCC
Confidence 999999988764 4679999999999998543
No 33
>PRK06193 hypothetical protein; Provisional
Probab=99.59 E-value=1.3e-14 Score=119.16 Aligned_cols=117 Identities=17% Similarity=0.107 Sum_probs=84.5
Q ss_pred CCCCCccc--ccCCCC----CCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCC
Q 040622 2 EGNNGPEA--LLSQEF----FDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGID 75 (235)
Q Consensus 2 hg~~~~~~--~~~~~~----~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 75 (235)
||++..|. ...+.. .|.|||+.|++||+.++++|...+ .+++.|||||+.||+|||++++.....
T Consensus 50 HGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~--~~~d~V~sSpl~Ra~qTA~il~~~~~~------- 120 (206)
T PRK06193 50 HAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALA--IPVGKVISSPYCRAWETAQLAFGRHEK------- 120 (206)
T ss_pred CccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECCcHHHHHHHHHHhccccc-------
Confidence 99985553 222222 257999999999999999998754 579999999999999999998642110
Q ss_pred CCCcccccccCCCCCEEecCCccccccCCCHHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhc
Q 040622 76 AHPSLTATATVNCPPIVAVELCRERLVPASSAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTR 155 (235)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~l~E~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~ 155 (235)
++ .+++ ++. ..+..++.+.+..|+..+++.+. .
T Consensus 121 --------------~~----~l~~------------~~~----------------~~~~~~~~~~y~~~l~~~I~~l~-~ 153 (206)
T PRK06193 121 --------------EI----RLNF------------LNS----------------EPVPAERNALLKAGLRPLLTTPP-D 153 (206)
T ss_pred --------------Cc----cccc------------ccc----------------cCCChhhHHHHHHHHHHHHhhCC-C
Confidence 00 0000 000 01134778888899998888886 4
Q ss_pred CCCeEEEEechHHHHHHHH
Q 040622 156 QEKEIAVVSHGIFLQQTLN 174 (235)
Q Consensus 156 ~~~~ilIVsHg~~i~~l~~ 174 (235)
..++|+||||+..|+.+..
T Consensus 154 ~~~~vLlVgHnp~i~~l~g 172 (206)
T PRK06193 154 PGTNTVLVGHDDNLEAATG 172 (206)
T ss_pred CCCeEEEEeCchHHHHHhC
Confidence 6678999999999998874
No 34
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.52 E-value=4.7e-13 Score=109.21 Aligned_cols=59 Identities=17% Similarity=-0.001 Sum_probs=45.0
Q ss_pred CCCC-CcccccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhc
Q 040622 2 EGNN-GPEALLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFG 64 (235)
Q Consensus 2 hg~~-~~~~~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~ 64 (235)
|||+ ++.. ......+.|||+.|++||+.++++|.... ..+.|||||+.||+|||++++.
T Consensus 62 HGet~~~~~-~~~~sD~RpLTerG~~qA~~lg~~L~~~~---~~d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 62 HAERCDRSD-NQCLSDKTGITVKGTQDARELGKAFSADI---PDYDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CccccCccC-CCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CCCEEEECCCHHHHHHHHHHhc
Confidence 8997 3321 11111226999999999999999998642 4489999999999999999964
No 35
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.51 E-value=2.5e-13 Score=107.27 Aligned_cols=135 Identities=20% Similarity=0.197 Sum_probs=96.3
Q ss_pred CCCCCcccccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhhcCCCCCCCCCCCCCCccc
Q 040622 2 EGNNGPEALLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDLVITSPLLRTLQTAVGVFGGDGQSQTDGIDAHPSLT 81 (235)
Q Consensus 2 hg~~~~~~~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~ 81 (235)
||.+.+.... ..-+|.|||+.|++|+..++++|+..+ ..+|+|+|||..||+|||+++++.++.
T Consensus 9 HgkA~~~~~~-~~D~dR~Lt~~G~~ea~~~a~~L~~~~--~~~D~VL~Spa~Ra~QTae~v~~~~~~------------- 72 (163)
T COG2062 9 HGKAEWAAPG-IADFDRPLTERGRKEAELVAAWLAGQG--VEPDLVLVSPAVRARQTAEIVAEHLGE------------- 72 (163)
T ss_pred cccccccCCC-CCCccCcCCHHHHHHHHHHHHHHHhcC--CCCCEEEeChhHHHHHHHHHHHHhhCc-------------
Confidence 7777655443 223488999999999999999999987 579999999999999999999886542
Q ss_pred ccccCCCCCEEecCCccccccCCCHHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCeEE
Q 040622 82 ATATVNCPPIVAVELCRERLVPASSAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTRQEKEIA 161 (235)
Q Consensus 82 ~~~~~~~~~i~~~~~l~E~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~~~~~il 161 (235)
. .... |+. ..|+ ... ..+...++.+.. .-.+++
T Consensus 73 -----~--~~~~------------------~~~----------------l~p~-~d~----~~~l~~l~~~~d-~v~~vl 105 (163)
T COG2062 73 -----K--KVEV------------------FEE----------------LLPN-GDP----GTVLDYLEALGD-GVGSVL 105 (163)
T ss_pred -----c--ccee------------------ccc----------------cCCC-CCH----HHHHHHHHHhcc-cCceEE
Confidence 0 1111 111 0000 111 233334444533 357899
Q ss_pred EEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEec
Q 040622 162 VVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDR 205 (235)
Q Consensus 162 IVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 205 (235)
||+|...+..++..+.+.. .....++.++|..++++..
T Consensus 106 lVgH~P~l~~l~~~L~~~~------~~~~~fptsgia~l~~~~~ 143 (163)
T COG2062 106 LVGHNPLLEELALLLAGGA------RLPVKFPTSGIAVLEFDGK 143 (163)
T ss_pred EECCCccHHHHHHHHcccc------ccccCCCcccEEEEEeccc
Confidence 9999999999999888761 1246889999999999975
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=97.04 E-value=0.00072 Score=56.79 Aligned_cols=50 Identities=28% Similarity=0.218 Sum_probs=40.0
Q ss_pred CCCChhHHHHHHHHHHHHHHcC-C-------CCCccEEEEcchhHHHHHHHHhhcCCC
Q 040622 18 AQLSPLGWQQVDNLRKRAEASG-L-------ARKIDLVITSPLLRTLQTAVGVFGGDG 67 (235)
Q Consensus 18 ~pLS~~G~~Qa~~l~~~L~~~~-~-------~~~~~~i~sSpl~Ra~qTA~~i~~~~~ 67 (235)
..||+.|.+|+..+|++|...= . ....-.+++|+..||+|||+.++.++-
T Consensus 17 ~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~gl~ 74 (242)
T cd07061 17 GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAGLF 74 (242)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHhcC
Confidence 6899999999999999997630 0 011226899999999999999988764
No 37
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=93.52 E-value=0.12 Score=47.16 Aligned_cols=49 Identities=24% Similarity=0.238 Sum_probs=38.9
Q ss_pred CCCChhHHHHHHHHHHHHHH---cC---C--CCCcc--EEEEcchhHHHHHHHHhhcCC
Q 040622 18 AQLSPLGWQQVDNLRKRAEA---SG---L--ARKID--LVITSPLLRTLQTAVGVFGGD 66 (235)
Q Consensus 18 ~pLS~~G~~Qa~~l~~~L~~---~~---~--~~~~~--~i~sSpl~Ra~qTA~~i~~~~ 66 (235)
-.||+.|.+|+..||++|++ .- + ..+.. .|.||+..||+.||+.+++++
T Consensus 69 GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nRtl~SAqs~laGl 127 (411)
T KOG3720|consen 69 GQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNRTLMSAQSVLAGL 127 (411)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccHHHHHHHHHHHhh
Confidence 36999999999999999988 31 1 11122 477999999999999998875
No 38
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=92.92 E-value=0.085 Score=45.86 Aligned_cols=51 Identities=31% Similarity=0.289 Sum_probs=39.6
Q ss_pred CCCCCChhHHHHHHHHHHHHHHc--CCCC-----CccEEEEcchhHHHHHHHHhhcCC
Q 040622 16 FDAQLSPLGWQQVDNLRKRAEAS--GLAR-----KIDLVITSPLLRTLQTAVGVFGGD 66 (235)
Q Consensus 16 ~D~pLS~~G~~Qa~~l~~~L~~~--~~~~-----~~~~i~sSpl~Ra~qTA~~i~~~~ 66 (235)
....||+.|.+|...+|++|... ++.. .-=.|+||...||++||+.++.++
T Consensus 59 ~~g~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl 116 (347)
T PF00328_consen 59 KWGQLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGL 116 (347)
T ss_dssp CTTSBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCcccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHH
Confidence 33459999999999999999874 1111 112589999999999999998875
No 39
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=89.86 E-value=0.34 Score=46.93 Aligned_cols=50 Identities=22% Similarity=0.098 Sum_probs=39.2
Q ss_pred CCCChhHHHHHHHHHHHHHHcC-----C--------CCCccEEEEcchhHHHHHHHHhhcCCC
Q 040622 18 AQLSPLGWQQVDNLRKRAEASG-----L--------ARKIDLVITSPLLRTLQTAVGVFGGDG 67 (235)
Q Consensus 18 ~pLS~~G~~Qa~~l~~~L~~~~-----~--------~~~~~~i~sSpl~Ra~qTA~~i~~~~~ 67 (235)
-.||..|+.||..||..+...- . ....-.||+|.-.|-+.||+..++++-
T Consensus 510 GelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL 572 (1018)
T KOG1057|consen 510 GELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLL 572 (1018)
T ss_pred CEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHH
Confidence 4699999999999999997631 0 001125999999999999999988753
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=84.11 E-value=1.5 Score=40.31 Aligned_cols=49 Identities=24% Similarity=0.201 Sum_probs=36.3
Q ss_pred CCCChhHHHHHHHHHHHHHHc----CCCCC-----cc--EEEEcchhHHHHHHHHhhcCC
Q 040622 18 AQLSPLGWQQVDNLRKRAEAS----GLARK-----ID--LVITSPLLRTLQTAVGVFGGD 66 (235)
Q Consensus 18 ~pLS~~G~~Qa~~l~~~L~~~----~~~~~-----~~--~i~sSpl~Ra~qTA~~i~~~~ 66 (235)
..||+.|..|...+|+++.+. ++... .+ .|++++..||++||+.++.++
T Consensus 71 GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~~~RTi~SAqafl~Gl 130 (436)
T PRK10172 71 GWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADVDQRTRKTGEAFLAGL 130 (436)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCCchHHHHHHHHHHHhc
Confidence 579999999999999988654 11111 11 477888899999998776654
No 41
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=82.15 E-value=3 Score=38.19 Aligned_cols=51 Identities=22% Similarity=0.122 Sum_probs=36.7
Q ss_pred CCCCCChhHHHHHHHHHHHHHHc----CCCCC-----c--cEEEEcchhHHHHHHHHhhcCC
Q 040622 16 FDAQLSPLGWQQVDNLRKRAEAS----GLARK-----I--DLVITSPLLRTLQTAVGVFGGD 66 (235)
Q Consensus 16 ~D~pLS~~G~~Qa~~l~~~L~~~----~~~~~-----~--~~i~sSpl~Ra~qTA~~i~~~~ 66 (235)
....||..|..+...+|+++... ++... . -.||+++..||++||+.++.++
T Consensus 67 ~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 67 PGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYANSLQRTVATAQFFITGA 128 (413)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeCCchHHHHHHHHHHHhc
Confidence 34579999999988888866543 22111 1 2488999999999998776654
No 42
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=62.83 E-value=20 Score=31.41 Aligned_cols=43 Identities=19% Similarity=0.129 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEechHHHHHHHHHHhccch
Q 040622 139 EEVAARGIEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQ 181 (235)
Q Consensus 139 ~e~~~R~~~~~~~l~~~~~~~ilIVsHg~~i~~l~~~~~~~~~ 181 (235)
..+..|+...+..+.++..++|+||+||.--.+++.++.....
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~ 216 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPP 216 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCC
Confidence 4666777777777777788889999999998888888877654
No 43
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=49.38 E-value=18 Score=29.14 Aligned_cols=32 Identities=25% Similarity=0.105 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHHHHHHHhc-CCCeEEEEechH
Q 040622 136 EPFEEVAARGIEFMKWLWTR-QEKEIAVVSHGI 167 (235)
Q Consensus 136 Es~~e~~~R~~~~~~~l~~~-~~~~ilIVsHg~ 167 (235)
-+.+++..|+..|++.|.+. ++..||+|+|-.
T Consensus 71 ~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 71 MSPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 45668999999999999985 788999999754
No 44
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=41.83 E-value=43 Score=28.08 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEechHHHHHHH
Q 040622 139 EEVAARGIEFMKWLWTRQEKEIAVVSHGIFLQQTL 173 (235)
Q Consensus 139 ~e~~~R~~~~~~~l~~~~~~~ilIVsHg~~i~~l~ 173 (235)
.+-...+...+..+.++.+..|++|||...+....
T Consensus 175 ~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~ 209 (226)
T COG1136 175 SKTAKEVLELLRELNKERGKTIIMVTHDPELAKYA 209 (226)
T ss_pred hHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhC
Confidence 34446666777777766678999999998887643
No 45
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=41.40 E-value=29 Score=31.36 Aligned_cols=37 Identities=11% Similarity=0.391 Sum_probs=27.8
Q ss_pred CcCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEechH
Q 040622 130 WKANTREPFEEVAARGIEFMKWLWTRQEKEIAVVSHGI 167 (235)
Q Consensus 130 ~~~~~~Es~~e~~~R~~~~~~~l~~~~~~~ilIVsHg~ 167 (235)
|+.+.. ...++..+++..++.+.+..+++|+||+|+.
T Consensus 92 WR~~~~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSm 128 (389)
T PF02450_consen 92 WRLSPA-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSM 128 (389)
T ss_pred hhhchh-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 554332 4557888888888888776688999999974
No 46
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=36.67 E-value=32 Score=29.33 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCeEEEEechHHH
Q 040622 134 TREPFEEVAARGIEFMKWLWTRQEKEIAVVSHGIFL 169 (235)
Q Consensus 134 ~~Es~~e~~~R~~~~~~~l~~~~~~~ilIVsHg~~i 169 (235)
-.++..+...-++.|++.-....++.|++||.||+.
T Consensus 7 ~p~~~~d~~s~~~eFi~~q~s~~~rrIVlVTSGGTt 42 (302)
T KOG2728|consen 7 VPESLDDPGSLIEEFIKLQASLQGRRIVLVTSGGTT 42 (302)
T ss_pred CcccccchhHHHHHHHHHHhhccCceEEEEecCCeE
Confidence 345555555666677776655566779999999874
No 47
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=34.93 E-value=1.5e+02 Score=21.67 Aligned_cols=40 Identities=20% Similarity=0.195 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHhc-CCCeEEEEec--hHHHHHHHHHHhcc
Q 040622 140 EVAARGIEFMKWLWTR-QEKEIAVVSH--GIFLQQTLNALLND 179 (235)
Q Consensus 140 e~~~R~~~~~~~l~~~-~~~~ilIVsH--g~~i~~l~~~~~~~ 179 (235)
.+...+...++.+.++ +...|+|++| ||.+..++...+..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhh
Confidence 3444555566665543 5578999999 46677666655544
No 48
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=34.31 E-value=29 Score=29.79 Aligned_cols=38 Identities=26% Similarity=0.242 Sum_probs=26.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCeEEEEechHHHHHH
Q 040622 134 TREPFEEVAARGIEFMKWLWTRQEKEIAVVSHGIFLQQT 172 (235)
Q Consensus 134 ~~Es~~e~~~R~~~~~~~l~~~~~~~ilIVsHg~~i~~l 172 (235)
...+.++...++.+.++...+ -..+|++.+|||.|..-
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~~-v~~dii~l~hGGPI~~p 227 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAARA-VNPDIIVLCHGGPIATP 227 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHHC-C-TT-EEEEECTTB-SH
T ss_pred ccCCHHHHHHHHHHHHHHHHH-hCCCeEEEEeCCCCCCH
Confidence 567899999999988888754 45678999999998753
No 49
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=30.99 E-value=13 Score=31.95 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=46.3
Q ss_pred CCCCCc----c-cccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccE-EEEcchhHHHHHHHHhhcCC
Q 040622 2 EGNNGP----E-ALLSQEFFDAQLSPLGWQQVDNLRKRAEASGLARKIDL-VITSPLLRTLQTAVGVFGGD 66 (235)
Q Consensus 2 hg~~~~----~-~~~~~~~~D~pLS~~G~~Qa~~l~~~L~~~~~~~~~~~-i~sSpl~Ra~qTA~~i~~~~ 66 (235)
|||.-= + +.......|.++.+.|..-+..+.++..... ..++|. |..|+..||++||..+..+.
T Consensus 20 HgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~-~y~~d~pit~~g~~~~~~~gr~l~~a~ 89 (272)
T KOG3734|consen 20 HGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPK-GYPIDPPITVSGFIQCKLIGRELLNAG 89 (272)
T ss_pred cccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcc-cCccCCCccchhHHHHHHHHHHHHhcC
Confidence 777622 2 3334444478899999988888888854421 157777 99999999999999887764
No 50
>PRK04946 hypothetical protein; Provisional
Probab=30.47 E-value=2.9e+02 Score=22.26 Aligned_cols=46 Identities=15% Similarity=-0.002 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCeEEEEech---HHHHHHHHHHhccc
Q 040622 134 TREPFEEVAARGIEFMKWLWTRQEKEIAVVSHG---IFLQQTLNALLNDC 180 (235)
Q Consensus 134 ~~Es~~e~~~R~~~~~~~l~~~~~~~ilIVsHg---~~i~~l~~~~~~~~ 180 (235)
.|-+.++....+..|+..... .+-..+.|-|| ++++..+..+|...
T Consensus 101 hG~~~eeA~~~L~~fl~~a~~-~g~r~v~IIHGkG~gvLk~~V~~wL~q~ 149 (181)
T PRK04946 101 HGLTQLQAKQELGALIAACRK-EHVFCACVMHGHGKHILKQQTPLWLAQH 149 (181)
T ss_pred CCCCHHHHHHHHHHHHHHHHH-cCCCEEEEEcCCCHhHHHHHHHHHHcCC
Confidence 678899999999999998765 45567788899 99999999999763
No 51
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=29.70 E-value=87 Score=26.65 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEechH
Q 040622 139 EEVAARGIEFMKWLWTRQEKEIAVVSHGI 167 (235)
Q Consensus 139 ~e~~~R~~~~~~~l~~~~~~~ilIVsHg~ 167 (235)
+.|..++..-+.++.++ +..|++|||..
T Consensus 180 ~~F~~K~~~rl~e~~~~-~~tiv~VSHd~ 207 (249)
T COG1134 180 AAFQEKCLERLNELVEK-NKTIVLVSHDL 207 (249)
T ss_pred HHHHHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 46778888888888664 48999999993
No 52
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=29.47 E-value=85 Score=25.90 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEEEech
Q 040622 140 EVAARGIEFMKWLWTRQEKEIAVVSHG 166 (235)
Q Consensus 140 e~~~R~~~~~~~l~~~~~~~ilIVsHg 166 (235)
.+...+...+.+++.+.+-++++|||.
T Consensus 163 ~LR~eMl~Lv~~l~~E~~~TllmVTH~ 189 (231)
T COG3840 163 ALRAEMLALVSQLCDERKMTLLMVTHH 189 (231)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEEEeCC
Confidence 466777788888888788899999998
No 53
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=28.88 E-value=85 Score=30.36 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=29.8
Q ss_pred CCcCC--CCCCHHHHHHHHHHHHHHHHhcC-CCeEEEEechH
Q 040622 129 LWKAN--TREPFEEVAARGIEFMKWLWTRQ-EKEIAVVSHGI 167 (235)
Q Consensus 129 ~~~~~--~~Es~~e~~~R~~~~~~~l~~~~-~~~ilIVsHg~ 167 (235)
-|+.. ..|...++..|++..++.+.+.. +++|+||+|+.
T Consensus 181 DWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSM 222 (642)
T PLN02517 181 DWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSM 222 (642)
T ss_pred ccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 35543 34667888899999999887654 68999999984
No 54
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=28.88 E-value=83 Score=26.79 Aligned_cols=29 Identities=17% Similarity=0.276 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEechHHH
Q 040622 141 VAARGIEFMKWLWTRQEKEIAVVSHGIFL 169 (235)
Q Consensus 141 ~~~R~~~~~~~l~~~~~~~ilIVsHg~~i 169 (235)
....+...+..|+++...+|++|||.--=
T Consensus 165 TR~~lq~~l~~lw~~~~~TvllVTHdi~E 193 (248)
T COG1116 165 TREELQDELLRLWEETRKTVLLVTHDVDE 193 (248)
T ss_pred HHHHHHHHHHHHHHhhCCEEEEEeCCHHH
Confidence 34445566677777778999999999433
No 55
>PF13479 AAA_24: AAA domain
Probab=28.47 E-value=1e+02 Score=25.14 Aligned_cols=38 Identities=13% Similarity=0.171 Sum_probs=31.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCeEEEEechHHHHH
Q 040622 134 TREPFEEVAARGIEFMKWLWTRQEKEIAVVSHGIFLQQ 171 (235)
Q Consensus 134 ~~Es~~e~~~R~~~~~~~l~~~~~~~ilIVsHg~~i~~ 171 (235)
.+..|.++..++..++..+....+.+|++++|...-..
T Consensus 104 ~~~~yg~~~~~~~~~i~~l~~~~~~~VI~tah~~~~~~ 141 (213)
T PF13479_consen 104 YGKGYGELQQEFMRFIDKLLNALGKNVIFTAHAKEEED 141 (213)
T ss_pred ccchHHHHHHHHHHHHHHHHHHCCCcEEEEEEEEEEEc
Confidence 36678899999999999877667899999999876554
No 56
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=26.46 E-value=89 Score=26.68 Aligned_cols=24 Identities=21% Similarity=0.288 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEech
Q 040622 142 AARGIEFMKWLWTRQEKEIAVVSHG 166 (235)
Q Consensus 142 ~~R~~~~~~~l~~~~~~~ilIVsHg 166 (235)
...+..+++++.++ +..|++|||.
T Consensus 175 ~~~i~~lL~~l~~e-g~tIl~vtHD 198 (254)
T COG1121 175 QKEIYDLLKELRQE-GKTVLMVTHD 198 (254)
T ss_pred HHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 35566677888776 8999999998
No 57
>PF13422 DUF4110: Domain of unknown function (DUF4110)
Probab=25.56 E-value=1.4e+02 Score=21.44 Aligned_cols=21 Identities=19% Similarity=0.129 Sum_probs=19.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q 040622 134 TREPFEEVAARGIEFMKWLWT 154 (235)
Q Consensus 134 ~~Es~~e~~~R~~~~~~~l~~ 154 (235)
.+||..+|+.|...+|...+-
T Consensus 14 p~EsLr~Ff~RT~~~W~~~a~ 34 (96)
T PF13422_consen 14 PFESLRDFFARTSEYWQEWAI 34 (96)
T ss_pred CCCcHHHHHHHhHHHHHHHHH
Confidence 789999999999999997764
No 58
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=24.99 E-value=94 Score=25.97 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEechHHHHHHH
Q 040622 139 EEVAARGIEFMKWLWTRQEKEIAVVSHGIFLQQTL 173 (235)
Q Consensus 139 ~e~~~R~~~~~~~l~~~~~~~ilIVsHg~~i~~l~ 173 (235)
.-...++...+-.+++..++-+++|||+---..++
T Consensus 165 a~tRe~mQelLldlw~~tgk~~lliTH~ieEAlfl 199 (259)
T COG4525 165 ALTREQMQELLLDLWQETGKQVLLITHDIEEALFL 199 (259)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhh
Confidence 33456777788888888899999999995444443
No 59
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=24.87 E-value=4.3e+02 Score=22.83 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=42.7
Q ss_pred cCCC--HHHHHhcCcCccccccccccCCcCCcCCCC-CCHHHHHHHHHHHHHHHHhcCCCeEEEEechHHHHHHHHH
Q 040622 102 VPAS--SAACREFIHVTREEASIESEDDKLWKANTR-EPFEEVAARGIEFMKWLWTRQEKEIAVVSHGIFLQQTLNA 175 (235)
Q Consensus 102 G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Es~~e~~~R~~~~~~~l~~~~~~~ilIVsHg~~i~~l~~~ 175 (235)
|..+ .++++..|.. ++-... | .-+.|+| -+.+++.+|+.+.+++|.++. =+++|+.=+..-...+..
T Consensus 16 GGLsVlrei~~~LP~e--~~iY~~---D-~a~~PYG~ks~e~I~~~~~~i~~~l~~~~-ik~lVIACNTASa~al~~ 85 (269)
T COG0796 16 GGLSVLREIRRQLPDE--DIIYVG---D-TARFPYGEKSEEEIRERTLEIVDFLLERG-IKALVIACNTASAVALED 85 (269)
T ss_pred CcHHHHHHHHHHCCCC--cEEEEe---c-CCCCCCCCCCHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHHHHHHH
Confidence 4444 7888889983 332221 1 3445544 589999999999999999876 556666555443333333
No 60
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=24.56 E-value=68 Score=23.32 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=13.1
Q ss_pred eEEEEechHHHHHHHHH
Q 040622 159 EIAVVSHGIFLQQTLNA 175 (235)
Q Consensus 159 ~ilIVsHg~~i~~l~~~ 175 (235)
.|+|+|||.+-..+...
T Consensus 1 giii~sHG~~A~g~~~~ 17 (116)
T PF03610_consen 1 GIIIASHGSLAEGLLES 17 (116)
T ss_dssp EEEEEEETTHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHH
Confidence 48999999877776554
No 61
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=24.37 E-value=86 Score=23.09 Aligned_cols=17 Identities=35% Similarity=0.546 Sum_probs=12.9
Q ss_pred eEEEEechHHHHHHHHH
Q 040622 159 EIAVVSHGIFLQQTLNA 175 (235)
Q Consensus 159 ~ilIVsHg~~i~~l~~~ 175 (235)
.++|+|||.+-..+...
T Consensus 2 ~ili~sHG~~A~gi~~~ 18 (122)
T cd00006 2 GIIIATHGGFASGLLNS 18 (122)
T ss_pred eEEEEcCHHHHHHHHHH
Confidence 58999999776666543
No 62
>COG3910 Predicted ATPase [General function prediction only]
Probab=24.17 E-value=1.2e+02 Score=25.05 Aligned_cols=39 Identities=18% Similarity=0.217 Sum_probs=25.4
Q ss_pred CCCeEEEEechHHHHHHHHHHhccchhhhhcccCCCccccceEEEEEEeccccCCCCCCcc
Q 040622 156 QEKEIAVVSHGIFLQQTLNALLNDCQASFNQELCPRFTNCEIRSVVIVDRSITGSCYPETI 216 (235)
Q Consensus 156 ~~~~ilIVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~~~~~~~~~ 216 (235)
++..|+|.||+.++.++ +.+ ..++++..++.+.++.+|.
T Consensus 177 sGaQ~IiATHSPiLlAi--------------------P~A--~I~~~~~~g~~~~~fe~te 215 (233)
T COG3910 177 SGAQIIIATHSPILLAI--------------------PGA--EIYEISESGIEERDFEETE 215 (233)
T ss_pred cCCeEEEEecChhheeC--------------------CCc--EEEEEecCCccccchHHHH
Confidence 56889999999876542 222 3455566666667776654
No 63
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=22.92 E-value=1e+02 Score=26.67 Aligned_cols=29 Identities=24% Similarity=0.200 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEechHHHHH
Q 040622 142 AARGIEFMKWLWTRQEKEIAVVSHGIFLQQ 171 (235)
Q Consensus 142 ~~R~~~~~~~l~~~~~~~ilIVsHg~~i~~ 171 (235)
..++...+..|. +.+..|++||||.+-.-
T Consensus 33 l~~l~~~i~~l~-~~g~~vilVssGAv~~G 61 (284)
T cd04256 33 LASIVEQVSELQ-SQGREVILVTSGAVAFG 61 (284)
T ss_pred HHHHHHHHHHHH-HCCCEEEEEeeCcHHhC
Confidence 334333444443 35788999999977543
No 64
>PRK00865 glutamate racemase; Provisional
Probab=22.20 E-value=4.8e+02 Score=21.98 Aligned_cols=62 Identities=13% Similarity=0.099 Sum_probs=42.7
Q ss_pred ccCCC--HHHHHhcCcCccccccccccCCcCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEechH
Q 040622 101 LVPAS--SAACREFIHVTREEASIESEDDKLWKANTREPFEEVAARGIEFMKWLWTRQEKEIAVVSHGI 167 (235)
Q Consensus 101 ~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~e~~~R~~~~~~~l~~~~~~~ilIVsHg~ 167 (235)
.|..+ .++++.+|.. ++-.+. |....|.+.-+.+++..++.+.++.|.+..-+-|+|-|...
T Consensus 15 iGGLtvl~~i~~~lp~~--~~iY~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~d~iVIaCNTa 78 (261)
T PRK00865 15 VGGLTVLREIRRLLPDE--HIIYVG---DTARFPYGEKSEEEIRERTLEIVEFLLEYGVKMLVIACNTA 78 (261)
T ss_pred ccHHHHHHHHHHHCCCC--CEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeCchH
Confidence 34444 7889999983 332222 22344446689999999999999999876556777777653
No 65
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=21.72 E-value=1.1e+02 Score=28.46 Aligned_cols=45 Identities=11% Similarity=0.086 Sum_probs=29.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCC-CeEEEEechHHHHHHHHHHhcc
Q 040622 134 TREPFEEVAARGIEFMKWLWTRQE-KEIAVVSHGIFLQQTLNALLND 179 (235)
Q Consensus 134 ~~Es~~e~~~R~~~~~~~l~~~~~-~~ilIVsHg~~i~~l~~~~~~~ 179 (235)
..|-..+...+++..++..-+..+ ++|+||+|++=-.. +.+|++.
T Consensus 157 ~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~-~lyFl~w 202 (473)
T KOG2369|consen 157 NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLY-VLYFLKW 202 (473)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHH-HHHHHhc
Confidence 456667777777777776655444 99999999853333 3344433
No 66
>TIGR02689 ars_reduc_gluta arsenate reductase, glutathione/glutaredoxin type. Members of this protein family represent a novel form of arsenate reductase, using glutathione and glutaredoxin rather than thioredoxin for reducing equivalents as do some homologous arsenate reductases. An example of this type is Synechocystis sp. strain PCC 6803 slr0946, and of latter type (excluded from this model) is Staphylococcus aureus plasmid pI258 ArsC. Both are among the subset of arsenate reductases that belong the the low-molecular-weight protein-tyrosine phosphatase superfamily.
Probab=21.71 E-value=87 Score=23.24 Aligned_cols=21 Identities=10% Similarity=0.072 Sum_probs=16.9
Q ss_pred CeEEEEechHHHHHHHHHHhc
Q 040622 158 KEIAVVSHGIFLQQTLNALLN 178 (235)
Q Consensus 158 ~~ilIVsHg~~i~~l~~~~~~ 178 (235)
++||+||+|.+-|+-++..+-
T Consensus 1 ~~vlfvC~~N~cRS~mAEa~~ 21 (126)
T TIGR02689 1 KKVMFVCKRNSCRSQMAEGFA 21 (126)
T ss_pred CeEEEEcCCcHHHHHHHHHHH
Confidence 479999999999988876543
No 67
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=21.48 E-value=3e+02 Score=22.31 Aligned_cols=42 Identities=17% Similarity=0.125 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHHHHh-cCCCeEEEEech--HHHHHHHHHHhc
Q 040622 137 PFEEVAARGIEFMKWLWT-RQEKEIAVVSHG--IFLQQTLNALLN 178 (235)
Q Consensus 137 s~~e~~~R~~~~~~~l~~-~~~~~ilIVsHg--~~i~~l~~~~~~ 178 (235)
.+..+...+...+..+.+ .++.+|+|++|+ |.+..++...+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHH
Confidence 344444444555554443 367889999995 566666555443
No 68
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=21.05 E-value=1.6e+02 Score=24.21 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEEEechHH
Q 040622 140 EVAARGIEFMKWLWTRQEKEIAVVSHGIF 168 (235)
Q Consensus 140 e~~~R~~~~~~~l~~~~~~~ilIVsHg~~ 168 (235)
+....+..++..+.++.+..|+++||..-
T Consensus 187 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~ 215 (236)
T cd03267 187 VAQENIRNFLKEYNRERGTTVLLTSHYMK 215 (236)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecCHH
Confidence 44456666777776545679999999954
No 69
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=21.05 E-value=1.6e+02 Score=23.75 Aligned_cols=29 Identities=24% Similarity=0.255 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEEEechHH
Q 040622 140 EVAARGIEFMKWLWTRQEKEIAVVSHGIF 168 (235)
Q Consensus 140 e~~~R~~~~~~~l~~~~~~~ilIVsHg~~ 168 (235)
....++.+.+.++.++.+..|++|||..-
T Consensus 174 ~~~~~l~~~l~~~~~~~~~tii~~sH~~~ 202 (218)
T cd03255 174 ETGKEVMELLRELNKEAGTTIVVVTHDPE 202 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEECCHH
Confidence 34456666677775534678999999853
No 70
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=21.03 E-value=1.7e+02 Score=22.87 Aligned_cols=29 Identities=14% Similarity=0.101 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEEEechHH
Q 040622 140 EVAARGIEFMKWLWTRQEKEIAVVSHGIF 168 (235)
Q Consensus 140 e~~~R~~~~~~~l~~~~~~~ilIVsHg~~ 168 (235)
+...++.+.+.++.++.+..++++||..-
T Consensus 134 ~~~~~l~~~l~~~~~~~~~tiii~sH~~~ 162 (178)
T cd03229 134 ITRREVRALLKSLQAQLGITVVLVTHDLD 162 (178)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 33456666677776543679999999853
No 71
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=20.66 E-value=1.5e+02 Score=21.92 Aligned_cols=36 Identities=8% Similarity=0.059 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCCeEEEEechHHHHH
Q 040622 135 REPFEEVAARGIEFMKWLWTRQEKEIAVVSHGIFLQQ 171 (235)
Q Consensus 135 ~Es~~e~~~R~~~~~~~l~~~~~~~ilIVsHg~~i~~ 171 (235)
.+...+....+..+++.... .++.|+|-|++|.-|+
T Consensus 57 ~~~~~~~~~~~~~~i~~~~~-~~~~VlVHC~~G~~RS 92 (138)
T smart00195 57 ETKISPYFPEAVEFIEDAEK-KGGKVLVHCQAGVSRS 92 (138)
T ss_pred CCChHHHHHHHHHHHHHHhc-CCCeEEEECCCCCchH
Confidence 35556677788888887754 5678999999876443
No 72
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=20.64 E-value=1.6e+02 Score=23.79 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEechHH
Q 040622 141 VAARGIEFMKWLWTRQEKEIAVVSHGIF 168 (235)
Q Consensus 141 ~~~R~~~~~~~l~~~~~~~ilIVsHg~~ 168 (235)
....+.+++.++.++.+..|+++||..-
T Consensus 166 ~~~~~~~~l~~~~~~~~~tiii~sH~~~ 193 (220)
T cd03293 166 TREQLQEELLDIWRETGKTVLLVTHDID 193 (220)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 3455566666665445678999999854
No 73
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=20.62 E-value=1.5e+02 Score=23.77 Aligned_cols=29 Identities=17% Similarity=-0.032 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEEEechHH
Q 040622 140 EVAARGIEFMKWLWTRQEKEIAVVSHGIF 168 (235)
Q Consensus 140 e~~~R~~~~~~~l~~~~~~~ilIVsHg~~ 168 (235)
....++.+.+.++.++.+..|+++||..-
T Consensus 164 ~~~~~l~~~l~~~~~~~~~tii~~sH~~~ 192 (213)
T cd03259 164 KLREELREELKELQRELGITTIYVTHDQE 192 (213)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 34456666677765544678999999853
No 74
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=20.56 E-value=1.8e+02 Score=24.03 Aligned_cols=34 Identities=15% Similarity=0.266 Sum_probs=20.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHh------cCCCeEEEEechH
Q 040622 134 TREPFEEVAARGIEFMKWLWT------RQEKEIAVVSHGI 167 (235)
Q Consensus 134 ~~Es~~e~~~R~~~~~~~l~~------~~~~~ilIVsHg~ 167 (235)
.+....+....+...++.|.+ ...+.|+||+|++
T Consensus 55 ~g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSm 94 (225)
T PF07819_consen 55 HGRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSM 94 (225)
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEch
Confidence 445555555555555555543 2567899999963
No 75
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=20.54 E-value=1.5e+02 Score=24.78 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEechHH
Q 040622 142 AARGIEFMKWLWTRQEKEIAVVSHGIF 168 (235)
Q Consensus 142 ~~R~~~~~~~l~~~~~~~ilIVsHg~~ 168 (235)
...+...+.++.++.+..|++|||...
T Consensus 151 ~~~l~~~l~~~~~~~~~tiiivsHd~~ 177 (246)
T cd03237 151 RLMASKVIRRFAENNEKTAFVVEHDII 177 (246)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 455666677776555789999999954
No 76
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=20.54 E-value=1.4e+02 Score=25.13 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEechH
Q 040622 141 VAARGIEFMKWLWTRQEKEIAVVSHGI 167 (235)
Q Consensus 141 ~~~R~~~~~~~l~~~~~~~ilIVsHg~ 167 (235)
-...+..++.++.++.+.+|+++||..
T Consensus 173 ~~~~l~~~l~~L~~~~~~tii~~tHd~ 199 (235)
T COG1122 173 GRRELLELLKKLKEEGGKTIIIVTHDL 199 (235)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCcH
Confidence 345566667777665568999999984
Done!