Query 040624
Match_columns 273
No_of_seqs 129 out of 1138
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 16:23:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040624.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040624hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.7E-73 9.2E-78 504.7 27.1 268 2-271 65-339 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.3E-72 1.5E-76 489.4 27.3 267 2-271 21-303 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 9.5E-72 3.2E-76 487.6 24.1 263 2-272 19-288 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 4.2E-68 1.4E-72 463.5 21.5 253 5-272 20-300 (311)
5 1odm_A Isopenicillin N synthas 100.0 4.8E-67 1.7E-71 460.8 24.7 256 2-271 27-318 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 2.5E-63 8.7E-68 427.1 21.3 234 3-250 14-262 (280)
7 2hbt_A EGL nine homolog 1; pro 96.0 0.15 5.3E-06 42.0 12.9 81 146-242 119-213 (247)
8 3dkq_A PKHD-type hydroxylase S 95.9 0.034 1.2E-06 45.9 8.4 80 144-241 99-194 (243)
9 2rg4_A Uncharacterized protein 93.4 1.8 6.2E-05 34.7 12.7 43 190-244 166-209 (216)
10 2jig_A Prolyl-4 hydroxylase; h 88.8 1.4 4.8E-05 35.4 7.5 48 192-243 170-218 (224)
11 2iuw_A Alkylated repair protei 87.1 1.9 6.6E-05 35.1 7.4 86 144-242 126-230 (238)
12 3s57_A Alpha-ketoglutarate-dep 86.3 2.8 9.7E-05 33.2 7.8 83 144-239 100-200 (204)
13 3itq_A Prolyl 4-hydroxylase, a 85.6 4.2 0.00014 32.6 8.5 105 118-243 94-213 (216)
14 3i3q_A Alpha-ketoglutarate-dep 84.5 7.5 0.00026 30.9 9.5 80 144-240 105-201 (211)
15 3tht_A Alkylated DNA repair pr 81.7 2 6.9E-05 37.1 5.4 107 143-258 197-328 (345)
16 1m5a_B Insulin B chain; alpha 49.1 18 0.00061 19.1 2.7 17 2-19 10-26 (30)
17 1e5r_A Proline oxidase; oxidor 34.9 45 0.0015 27.9 4.5 75 145-240 93-175 (290)
18 2x4k_A 4-oxalocrotonate tautom 31.5 46 0.0016 19.7 3.3 23 111-133 18-40 (63)
19 3kt7_A PKHD-type hydroxylase T 30.6 2.5E+02 0.0085 26.1 9.0 105 118-244 105-231 (633)
20 3abf_A 4-oxalocrotonate tautom 30.4 43 0.0015 20.1 3.0 22 112-133 17-38 (64)
21 1otf_A 4-oxalocrotonate tautom 27.2 64 0.0022 19.1 3.3 22 111-132 15-36 (62)
22 2ww6_A Fibritin, T4 fibritin; 27.1 44 0.0015 16.9 1.9 16 181-196 8-24 (27)
23 2opa_A Probable tautomerase YW 26.0 70 0.0024 18.9 3.4 22 111-132 15-36 (61)
24 2da7_A Zinc finger homeobox pr 25.5 35 0.0012 21.9 1.8 40 99-138 14-53 (71)
25 3rcq_A Aspartyl/asparaginyl be 25.3 65 0.0022 25.2 3.7 42 204-245 141-187 (197)
26 2rdq_A 1-deoxypentalenic acid 23.8 80 0.0027 25.6 4.3 35 5-41 22-56 (288)
27 3dl3_A Tellurite resistance pr 23.6 40 0.0014 24.1 2.0 25 219-244 78-102 (119)
28 3ry0_A Putative tautomerase; o 23.3 88 0.003 18.9 3.5 24 110-133 14-37 (65)
29 3m21_A Probable tautomerase HP 21.4 1E+02 0.0034 18.8 3.5 24 110-133 17-40 (67)
30 1y66_A Engrailed homeodomain; 21.4 1.1E+02 0.0039 17.2 3.2 39 100-138 7-45 (52)
31 3pvj_A Alpha-ketoglutarate-dep 21.1 1.1E+02 0.0038 25.0 4.6 36 2-41 28-63 (277)
32 1gyx_A YDCE, B1461, hypothetic 21.0 94 0.0032 19.6 3.3 25 110-134 15-39 (76)
33 2opw_A Phyhd1 protein; double- 20.7 79 0.0027 25.7 3.6 37 4-42 5-41 (291)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.7e-73 Score=504.66 Aligned_cols=268 Identities=32% Similarity=0.657 Sum_probs=248.2
Q ss_pred HHHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhCCCHHHHhhhhhcC--CCccccccccccCCCcccchhhhc
Q 040624 2 LFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYAREN--GSYDGYMNHIIDSKDQAFDWIDRL 79 (273)
Q Consensus 2 ~~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~ 79 (273)
+++++|++||++ ||||||+||||+.++++++++.+++||+||.|+|+++.... ..++||+........+..||+|.|
T Consensus 65 ~~~~~l~~A~~~-~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~ 143 (356)
T 1gp6_A 65 NCIEELKKASLD-WGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYF 143 (356)
T ss_dssp HHHHHHHHHHHH-TSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEE
T ss_pred HHHHHHHHHHHh-CCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhhee
Confidence 478999999999 99999999999999999999999999999999999997743 468999887655556788999999
Q ss_pred ccccCCcchhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhhcC--CCccceEEeeeCCCCCC
Q 040624 80 HLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGE--EASMLSIFNLYPPCPRP 157 (273)
Q Consensus 80 ~~~~~p~~~~~~n~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~--~~~~~lr~~~Yp~~~~~ 157 (273)
.+...|.+...+|.||+.+|+|++.+++|+++|.+++.+|+++|+++||+++++|.+.+.. .+.+.||++|||+++++
T Consensus 144 ~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~ 223 (356)
T 1gp6_A 144 FHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQP 223 (356)
T ss_dssp EEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSST
T ss_pred eeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCc
Confidence 8877665445679999999999999999999999999999999999999999999988842 36778999999999988
Q ss_pred CCccccCcccCCCceEEEeecCCCCceEEeeCCeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccCCCCCeeEEE
Q 040624 158 DLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLV 237 (273)
Q Consensus 158 ~~~~~~~~H~D~~~lTll~~d~~~~GLqv~~~g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~ 237 (273)
+..+|+++|||+|+||||+|| .++||||+++|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.++.++|||++
T Consensus 224 ~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia 302 (356)
T 1gp6_A 224 ELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWA 302 (356)
T ss_dssp TTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEE
T ss_pred ccccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEE
Confidence 888999999999999999999 7999999999999999999999999999999999999999999999998888999999
Q ss_pred EeecCCCCC-eEecCCCccCCCCCCCCcchh--hhhh
Q 040624 238 MFCFPNPNK-EIEPVKGLVTGTRPRLYKTMK--DYTS 271 (273)
Q Consensus 238 ~F~~P~~~~-~i~p~~~~~~~~~~~~y~~~~--e~~~ 271 (273)
||++|+.|+ +|+|+++++++++|++|++++ ||+.
T Consensus 303 ~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~ 339 (356)
T 1gp6_A 303 VFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIE 339 (356)
T ss_dssp EEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHH
T ss_pred EeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHH
Confidence 999999999 999999999999999999999 9985
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4.3e-72 Score=489.38 Aligned_cols=267 Identities=27% Similarity=0.488 Sum_probs=237.7
Q ss_pred HHHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhCCCHHHHhhhhhcCCCccccccccccC--CCcccchhhhc
Q 040624 2 LFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDS--KDQAFDWIDRL 79 (273)
Q Consensus 2 ~~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~~~~--~~~~~d~~e~~ 79 (273)
+++++|++||++ ||||||+||||+.++++++++.+++||+||.|+|+++.......+||.+.+.+. .....||+|.|
T Consensus 21 ~~~~~l~~A~~~-~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g~e~~~~~~~~D~kE~~ 99 (312)
T 3oox_A 21 RFAQELGASFER-YGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGVETAKGADHYDLKEFW 99 (312)
T ss_dssp HHHHHHHHHHHH-HSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCCCCCSTTSCSCCCCEEE
T ss_pred HHHHHHHHHHHh-CcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccccceecCCCCCCCceeee
Confidence 578999999999 999999999999999999999999999999999999976544578997765443 23468999999
Q ss_pred ccccC-Cc-c----hhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhhcCCCccceEEeeeCC
Q 040624 80 HLVTK-PE-D----KRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPP 153 (273)
Q Consensus 80 ~~~~~-p~-~----~~~~n~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~ 153 (273)
++... +. + ...+|.||+.+|+|++.+++|+++|.+++.+|+++|+++||+++++|.+.+ ..+.+.+|++||||
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~-~~~~~~lr~~~Ypp 178 (312)
T 3oox_A 100 HMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTV-QDGNSVLRLLHYPP 178 (312)
T ss_dssp EECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHH-TTCCCEEEEEEECC
T ss_pred EeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHh-cCCcceeeeEecCC
Confidence 87542 21 1 124689999999999999999999999999999999999999999999988 45678899999999
Q ss_pred CCCCCCccccCcccCCCceEEEeecCCCCceEEee-CCeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccCC---
Q 040624 154 CPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQK-DDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNT--- 229 (273)
Q Consensus 154 ~~~~~~~~~~~~H~D~~~lTll~~d~~~~GLqv~~-~g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~~--- 229 (273)
++.++..+|+++|||+|+||||+|| .++||||+. +|+|++|+|.+|++||||||+||+||||+|+|+.|||+.++
T Consensus 179 ~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~ 257 (312)
T 3oox_A 179 IPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPER 257 (312)
T ss_dssp CSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGG
T ss_pred CCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccC
Confidence 9876545999999999999999999 899999975 89999999999999999999999999999999999998764
Q ss_pred -CCCeeEEEEeecCCCCCeEecCCCccCCCCCCCCc-chh--hhhh
Q 040624 230 -ERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLYK-TMK--DYTS 271 (273)
Q Consensus 230 -~~~R~S~~~F~~P~~~~~i~p~~~~~~~~~~~~y~-~~~--e~~~ 271 (273)
+.+|||++||++|+.|++|+|+++++++++|++|+ +++ ||+.
T Consensus 258 ~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~ 303 (312)
T 3oox_A 258 RGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQ 303 (312)
T ss_dssp TTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHH
T ss_pred CCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHH
Confidence 45799999999999999999999999999999999 999 9875
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=9.5e-72 Score=487.58 Aligned_cols=263 Identities=30% Similarity=0.557 Sum_probs=234.4
Q ss_pred HHHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhCCCHHHHhhhhhcCCCccccccccccCCCcccchhhhccc
Q 040624 2 LFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHL 81 (273)
Q Consensus 2 ~~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~ 81 (273)
+++++|++||++ ||||||+||||+.++++++++.+++||+||.|+|+++... .+||..... +.+..||+|.|.+
T Consensus 19 ~~~~~l~~A~~~-~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~~~--e~~~~d~ke~~~~ 92 (319)
T 1w9y_A 19 ATMEMIKDACEN-WGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGVQA--EVTDMDWESTFFL 92 (319)
T ss_dssp HHHHHHHHHHHH-TSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTCCC--CGGGCCCCEEEEE
T ss_pred HHHHHHHHHHHh-CCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCcccc--cCCCCChhhheee
Confidence 478999999999 9999999999999999999999999999999999998653 247765432 2357799999988
Q ss_pred ccCCcchhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhhcC--CCccceEEeeeCCCCCCCC
Q 040624 82 VTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGE--EASMLSIFNLYPPCPRPDL 159 (273)
Q Consensus 82 ~~~p~~~~~~n~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~--~~~~~lr~~~Yp~~~~~~~ 159 (273)
...|.. .+|.||+.+|+|++.+++|++.|.+++.+|+++|+++||+++++|.+.+.. ...+.+|++|||||++++.
T Consensus 93 ~~~p~~--~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~ 170 (319)
T 1w9y_A 93 KHLPIS--NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDL 170 (319)
T ss_dssp EEESCC--GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGG
T ss_pred ecCCcc--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCccccc
Confidence 765543 468999999999999999999999999999999999999999999988843 3557899999999998888
Q ss_pred ccccCcccCCCceEEEeecCCCCceEEeeCCeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccCCCCCeeEEEEe
Q 040624 160 AIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMF 239 (273)
Q Consensus 160 ~~~~~~H~D~~~lTll~~d~~~~GLqv~~~g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~~F 239 (273)
..|+++|||+|+||||+||+.++||||.++|+|++|+|.||++|||+||+||+||||+|+|+.|||+.++.++|+|++||
T Consensus 171 ~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F 250 (319)
T 1w9y_A 171 IKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASF 250 (319)
T ss_dssp GSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEE
T ss_pred ccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEE
Confidence 89999999999999999953799999999999999999999999999999999999999999999999888899999999
Q ss_pred ecCCCCCeEecCCCccCCC---CCCCCcchh--hhhhc
Q 040624 240 CFPNPNKEIEPVKGLVTGT---RPRLYKTMK--DYTSI 272 (273)
Q Consensus 240 ~~P~~~~~i~p~~~~~~~~---~~~~y~~~~--e~~~~ 272 (273)
++|+.|++|+|++++++++ +|++|++++ ||+..
T Consensus 251 ~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~ 288 (319)
T 1w9y_A 251 YNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKL 288 (319)
T ss_dssp EECCTTCEECCCGGGC--------CCCCCEEHHHHHHT
T ss_pred ecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHH
Confidence 9999999999999999988 599999999 99853
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=4.2e-68 Score=463.50 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=217.8
Q ss_pred HHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhCCC-HHHHhhhhhc-CCCccccccccccC------CCcccchh
Q 040624 5 QRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLP-LEEKKKYARE-NGSYDGYMNHIIDS------KDQAFDWI 76 (273)
Q Consensus 5 ~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~-~~~~~Gy~~~~~~~------~~~~~d~~ 76 (273)
++|++||++ ||||||+||||+.++++++++.+++||+|| .|+|+++... ....+||.+.+.+. ..+..||+
T Consensus 20 ~~l~~A~~~-~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~e~~~~~~~~~~~~d~~ 98 (311)
T 1dcs_A 20 DEFRRCLRD-KGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYS 98 (311)
T ss_dssp HHHHHHHHH-TCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-----------------C
T ss_pred HHHHHHHHh-CcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccccccccccCCCCCCCcc
Confidence 489999999 999999999999999999999999999999 9999999774 35689998865442 24678999
Q ss_pred hhcccccCCcchhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CchhhHhhhcCCCccceEEeeeC
Q 040624 77 DRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNL----EENCFLDMYGEEASMLSIFNLYP 152 (273)
Q Consensus 77 e~~~~~~~p~~~~~~n~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl----~~~~~~~~~~~~~~~~lr~~~Yp 152 (273)
|.|.+... +|.|| +|+|++.+++|+++|.+++.+|+++|+++||+ ++++|.+. .+.+|++|||
T Consensus 99 E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~-----~~~lrl~~YP 165 (311)
T 1dcs_A 99 MCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC-----EPLLRFRYFP 165 (311)
T ss_dssp EEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC-----CCEEEEEEEC
T ss_pred eeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc-----chhhheecCC
Confidence 99988654 58899 89999999999999999999999999999999 77777643 6789999999
Q ss_pred CCCCCC--C--ccccCcccCCCceEEEeecCCCCc---eEEeeCCeeEECCCCCCeEEEEechhHHHHhCCcccCCCccc
Q 040624 153 PCPRPD--L--AIGLKPHADASVFTYLIQDKEVEG---LQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRV 225 (273)
Q Consensus 153 ~~~~~~--~--~~~~~~H~D~~~lTll~~d~~~~G---Lqv~~~g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV 225 (273)
|+++++ + .+|+++|||+|+||||+||+.++| |||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||
T Consensus 166 p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRV 245 (311)
T 1dcs_A 166 QVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHV 245 (311)
T ss_dssp C-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEE
T ss_pred CCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceE
Confidence 998763 3 678999999999999999756899 999999999999999999999999999999999999999999
Q ss_pred ccCC-----CCCeeEEEEeecCCCCCeEecCCCccCCCCCCCC--cchh--hhhhc
Q 040624 226 VTNT-----ERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLY--KTMK--DYTSI 272 (273)
Q Consensus 226 ~~~~-----~~~R~S~~~F~~P~~~~~i~p~~~~~~~~~~~~y--~~~~--e~~~~ 272 (273)
+.++ .++|||++||++|+.|++|+ +++++++++|++| ++++ ||+..
T Consensus 246 v~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~ 300 (311)
T 1dcs_A 246 AAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGG 300 (311)
T ss_dssp CCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCS
T ss_pred eCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHH
Confidence 9887 67999999999999999999 9999998999999 9999 99853
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.8e-67 Score=460.78 Aligned_cols=256 Identities=25% Similarity=0.356 Sum_probs=228.8
Q ss_pred HHHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhh-hCCCHHHHhhhhhcCCCccccccccccC--C------Ccc
Q 040624 2 LFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQF-FGLPLEEKKKYARENGSYDGYMNHIIDS--K------DQA 72 (273)
Q Consensus 2 ~~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~Gy~~~~~~~--~------~~~ 72 (273)
+++++|++||++ ||||||+|||| +++++++.+++| |+||.|+|+++.. +||...+.+. . .+.
T Consensus 27 ~~~~~l~~A~~~-~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy~~~~~e~~~~~~~~~~~~~ 97 (331)
T 1odm_A 27 RVAQQIDAASRD-TGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAYNKEHQDQVRAGYYLSIPGK 97 (331)
T ss_dssp HHHHHHHHHHHT-TSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTTCTTCTTCSSSEEECCBTTT
T ss_pred HHHHHHHHHHHh-CCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCCCcCCccccccccccccCCC
Confidence 478999999999 99999999999 899999999999 9999999999965 5776544321 1 157
Q ss_pred cchhhhcccccCCc--c--------hhhcccCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhhcC
Q 040624 73 FDWIDRLHLVTKPE--D--------KRQLKLWPEN--PQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGE 140 (273)
Q Consensus 73 ~d~~e~~~~~~~p~--~--------~~~~n~wP~~--~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~ 140 (273)
.||+|.|++...+. + ..++|.||+. +|+|++.+++|+++|.+++..|+++|+++||+++++|.+.+ .
T Consensus 98 ~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~-~ 176 (331)
T 1odm_A 98 KAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHF-K 176 (331)
T ss_dssp BCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGC-C
T ss_pred CChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh-c
Confidence 79999998875421 1 1247999988 99999999999999999999999999999999999999888 4
Q ss_pred CCccceE--EeeeC------C---CCCCCC-ccccCcccCCCceEEEeecCCCCceEEee-CCeeEECCCCCCeEEEEec
Q 040624 141 EASMLSI--FNLYP------P---CPRPDL-AIGLKPHADASVFTYLIQDKEVEGLQFQK-DDQWYRVPVIPGAFVINVG 207 (273)
Q Consensus 141 ~~~~~lr--~~~Yp------~---~~~~~~-~~~~~~H~D~~~lTll~~d~~~~GLqv~~-~g~W~~v~~~~~~~vvnvG 207 (273)
.+.+.+| ++||| | +++++. .+|+++|||+|+||||+|| .++||||+. +| |++|+|.+|++|||+|
T Consensus 177 ~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~g-Wi~V~p~pgalvVNiG 254 (331)
T 1odm_A 177 PDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNLQVETAAG-YQDIEADDTGYLINCG 254 (331)
T ss_dssp TTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCEEEEETTE-EEECCCCTTSEEEEEC
T ss_pred CcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCEEEEcCCC-eEECCCCCCeEEEEcc
Confidence 5778999 99999 7 666665 7899999999999999999 899999995 78 9999999999999999
Q ss_pred hhHHHHhCCcccCCCcccccCCCCCeeEEEEeecCCCCCeEecCCCccCCCCCCCCcchh--hhhh
Q 040624 208 DQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLYKTMK--DYTS 271 (273)
Q Consensus 208 d~l~~~T~G~~~s~~HRV~~~~~~~R~S~~~F~~P~~~~~i~p~~~~~~~~~~~~y~~~~--e~~~ 271 (273)
|+||+||||+|+|+.|||+. ++.+|+|++||++|+.|++|+|+++++++++ ++|++++ ||++
T Consensus 255 D~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~ 318 (331)
T 1odm_A 255 SYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQ 318 (331)
T ss_dssp HHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHH
T ss_pred HHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHH
Confidence 99999999999999999985 4789999999999999999999999999888 9999999 8875
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2.5e-63 Score=427.09 Aligned_cols=234 Identities=27% Similarity=0.423 Sum_probs=202.7
Q ss_pred HHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhCCCHHHHhhhhhcCCCcccccccc-ccC--CCcccchhhhc
Q 040624 3 FAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHI-IDS--KDQAFDWIDRL 79 (273)
Q Consensus 3 ~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~-~~~--~~~~~d~~e~~ 79 (273)
.+++|.+||++ ||||||+||||+.++++++++.+++||++ |+|+++...+...+||...+ .+. .....||+|.|
T Consensus 14 ~~~~l~~A~~~-~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~~~~~~D~kE~~ 90 (280)
T 3on7_A 14 SAKRFVESLRE-TGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAKGHTVKDIKEYY 90 (280)
T ss_dssp HHHHHHHHHHH-HSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC--------CCCCSCEEE
T ss_pred HHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccCCCCcccHHHHH
Confidence 57899999999 99999999999999999999999999998 78999877666789998754 222 22357999988
Q ss_pred ccccCCcchhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--hh---hHhhhcCCCccceEEeeeCCC
Q 040624 80 HLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEE--NC---FLDMYGEEASMLSIFNLYPPC 154 (273)
Q Consensus 80 ~~~~~p~~~~~~n~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~--~~---~~~~~~~~~~~~lr~~~Yp~~ 154 (273)
++. .||..+|+||+.+++|+++|.+++.+|+++|+++||++. ++ +.+.+.....+.+|++||||+
T Consensus 91 ~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~ 160 (280)
T 3on7_A 91 HVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPM 160 (280)
T ss_dssp EEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCC
T ss_pred hcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCC
Confidence 762 377778999999999999999999999999999998763 22 445553333488999999999
Q ss_pred CCCC--CccccCcccCCCceEEEeecCCCCceEEee-CCeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccCC--
Q 040624 155 PRPD--LAIGLKPHADASVFTYLIQDKEVEGLQFQK-DDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNT-- 229 (273)
Q Consensus 155 ~~~~--~~~~~~~H~D~~~lTll~~d~~~~GLqv~~-~g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~~-- 229 (273)
+.++ ..+|+++|||+|+||||+|| .++||||+. +|+|++|+|.||++|||+||+||+||||+|+|+.|||+.++
T Consensus 161 ~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~ 239 (280)
T 3on7_A 161 TGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGT 239 (280)
T ss_dssp CTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTC
T ss_pred CCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCC
Confidence 8654 47899999999999999999 899999996 89999999999999999999999999999999999998864
Q ss_pred --CCCeeEEEEeecCCCCCeEec
Q 040624 230 --ERGRMSLVMFCFPNPNKEIEP 250 (273)
Q Consensus 230 --~~~R~S~~~F~~P~~~~~i~p 250 (273)
..+|||++||++|+.|++|+|
T Consensus 240 ~~~~~R~Si~~F~~P~~d~~i~p 262 (280)
T 3on7_A 240 DKTKSRISLPLFLHPHPSVVLSE 262 (280)
T ss_dssp CTTSCEEECCEEECCCTTCBCSS
T ss_pred CCCCCeEEEEEEEcCCCCCEECC
Confidence 458999999999999999985
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.96 E-value=0.15 Score=42.01 Aligned_cols=81 Identities=17% Similarity=0.266 Sum_probs=55.0
Q ss_pred eEEeeeCCCCCCCCccccCcccCCC-----ceEEEeecCC------CCc-eEEeeCC--eeEECCCCCCeEEEEechhHH
Q 040624 146 SIFNLYPPCPRPDLAIGLKPHADAS-----VFTYLIQDKE------VEG-LQFQKDD--QWYRVPVIPGAFVINVGDQIE 211 (273)
Q Consensus 146 lr~~~Yp~~~~~~~~~~~~~H~D~~-----~lTll~~d~~------~~G-Lqv~~~g--~W~~v~~~~~~~vvnvGd~l~ 211 (273)
+.+..|++. .....+|.|.. .+|+++.-+. .+| |.+...+ ....|.|..|.+|++-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 667788751 22356777762 5888876322 144 6777643 5688999999999887431
Q ss_pred HHhCCcccCCCcccccCCCCCeeEEEEeecC
Q 040624 212 IMSNGIFKSPIHRVVTNTERGRMSLVMFCFP 242 (273)
Q Consensus 212 ~~T~G~~~s~~HRV~~~~~~~R~S~~~F~~P 242 (273)
-.+|.|.. ....|+|++.++.-
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEcC
Confidence 16899976 45799999886654
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.87 E-value=0.034 Score=45.87 Aligned_cols=80 Identities=20% Similarity=0.231 Sum_probs=53.8
Q ss_pred cceEEeeeCCCCCCCCccccCcccCCC-----------ceEEEeecCC----CCc-eEEeeCCeeEECCCCCCeEEEEec
Q 040624 144 MLSIFNLYPPCPRPDLAIGLKPHADAS-----------VFTYLIQDKE----VEG-LQFQKDDQWYRVPVIPGAFVINVG 207 (273)
Q Consensus 144 ~~lr~~~Yp~~~~~~~~~~~~~H~D~~-----------~lTll~~d~~----~~G-Lqv~~~g~W~~v~~~~~~~vvnvG 207 (273)
.-+++++|.+.. -..+|.|.. .+|+++.-+. .+| |.+.....=..|.|..|.+|+.-.
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 347888888732 246676653 4666655322 233 666664334679999999998743
Q ss_pred hhHHHHhCCcccCCCcccccCCCCCeeEEEEeec
Q 040624 208 DQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCF 241 (273)
Q Consensus 208 d~l~~~T~G~~~s~~HRV~~~~~~~R~S~~~F~~ 241 (273)
.++|+|.+.....|++++.+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3689997655568999998876
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.45 E-value=1.8 Score=34.69 Aligned_cols=43 Identities=16% Similarity=0.058 Sum_probs=33.0
Q ss_pred CeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccCCC-CCeeEEEEeecCCC
Q 040624 190 DQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTE-RGRMSLVMFCFPNP 244 (273)
Q Consensus 190 g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~~~-~~R~S~~~F~~P~~ 244 (273)
..+..|.|.+|.+|++-.. ..|+|.+..+ ++|+||+|-+.|..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3566889999999988663 3799987654 68999999988865
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=88.76 E-value=1.4 Score=35.42 Aligned_cols=48 Identities=13% Similarity=0.133 Sum_probs=34.0
Q ss_pred eEECCCCCCeEEEEechhHHHHhCCcc-cCCCcccccCCCCCeeEEEEeecCC
Q 040624 192 WYRVPVIPGAFVINVGDQIEIMSNGIF-KSPIHRVVTNTERGRMSLVMFCFPN 243 (273)
Q Consensus 192 W~~v~~~~~~~vvnvGd~l~~~T~G~~-~s~~HRV~~~~~~~R~S~~~F~~P~ 243 (273)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.+.....|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 3789999999887653 1233433 5689999765456899999888654
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=87.14 E-value=1.9 Score=35.11 Aligned_cols=86 Identities=15% Similarity=0.168 Sum_probs=55.7
Q ss_pred cceEEeeeCCCCCCCCccccCcccCC--------CceEEEeecCCCCceEEee-C----------CeeEECCCCCCeEEE
Q 040624 144 MLSIFNLYPPCPRPDLAIGLKPHADA--------SVFTYLIQDKEVEGLQFQK-D----------DQWYRVPVIPGAFVI 204 (273)
Q Consensus 144 ~~lr~~~Yp~~~~~~~~~~~~~H~D~--------~~lTll~~d~~~~GLqv~~-~----------g~W~~v~~~~~~~vv 204 (273)
..+.+|+|.+.. -++++|.|- .+.||-+.. ..-+.+.. . +..+.+...+|+++|
T Consensus 126 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~--~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 126 NSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA--TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp CEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES--CEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred CEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC--CEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 356789998732 368889885 233333321 22344433 1 367889999999999
Q ss_pred EechhHHHHhCCcccCCCcccccCCCCCeeEEEEeecC
Q 040624 205 NVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFP 242 (273)
Q Consensus 205 nvGd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~~F~~P 242 (273)
+-|++=..|..|.-+.. .....|+|+.|-...
T Consensus 199 M~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v~ 230 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEY------HSREPRVNLTFRTVY 230 (238)
T ss_dssp EEETHHHHEEEEECCCS------SCCCCEEEEEEECCC
T ss_pred EChhhhCccEecCCCcC------CCCCCEEEEEeeecc
Confidence 99998777775554321 134689999986543
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=86.26 E-value=2.8 Score=33.23 Aligned_cols=83 Identities=12% Similarity=0.132 Sum_probs=51.9
Q ss_pred cceEEeeeCCCCCCCCccccCcccCCC--------ceEEEeecCCCCceEEeeC----------CeeEECCCCCCeEEEE
Q 040624 144 MLSIFNLYPPCPRPDLAIGLKPHADAS--------VFTYLIQDKEVEGLQFQKD----------DQWYRVPVIPGAFVIN 205 (273)
Q Consensus 144 ~~lr~~~Yp~~~~~~~~~~~~~H~D~~--------~lTll~~d~~~~GLqv~~~----------g~W~~v~~~~~~~vvn 205 (273)
..+-+|+|.+.. -++++|.|-- ++++-+. ...-+.+... +..+.+...+|+++|.
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 346789998732 2688998862 2233232 1233444431 2467888999999999
Q ss_pred echhHHHHhCCcccCCCcccccCCCCCeeEEEEe
Q 040624 206 VGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMF 239 (273)
Q Consensus 206 vGd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~~F 239 (273)
-|++=..|..|.-+.. .....|+|+.|-
T Consensus 173 ~g~~q~~w~H~Ip~~~------~~~~~RislTFR 200 (204)
T 3s57_A 173 NHPTNTHWYHSLPVRK------KVLAPRVNLTFR 200 (204)
T ss_dssp ETTHHHHEEEEECCCT------TCCSCEEEEEEE
T ss_pred CchhhheeEeeccccC------CCCCCEEEEEee
Confidence 9988777874432211 123689999874
No 13
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=85.65 E-value=4.2 Score=32.56 Aligned_cols=105 Identities=16% Similarity=0.016 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCCchhhHhhhcCCCccceEEeeeCCCCCCCCccccCcccCCC-----------ceEEEeecC--CCCc-
Q 040624 118 MLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADAS-----------VFTYLIQDK--EVEG- 183 (273)
Q Consensus 118 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~H~D~~-----------~lTll~~d~--~~~G- 183 (273)
.|.+.|+..+|++.+ ....+++.+|.+... ..+|.|.. .+|+++.-+ ..+|
T Consensus 94 ~i~~Ri~~~~gl~~~---------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGe 158 (216)
T 3itq_A 94 KIEKRISSIMNVPAS---------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGE 158 (216)
T ss_dssp HHHHHHHHHHTSCGG---------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECC
T ss_pred HHHHHHHHhcCceec---------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCce
Confidence 344444455677532 123477888876322 35666653 377776632 2333
Q ss_pred eEEeeCCeeEECCCCCCeEEEEechhHHHHhCCc-ccCCCcccccCCCCCeeEEEEeecCC
Q 040624 184 LQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGI-FKSPIHRVVTNTERGRMSLVMFCFPN 243 (273)
Q Consensus 184 Lqv~~~g~W~~v~~~~~~~vvnvGd~l~~~T~G~-~~s~~HRV~~~~~~~R~S~~~F~~P~ 243 (273)
+.+... =+.|.|..|.+|+.-.- ..+|. -..++|+|.+.....|+++..+++-.
T Consensus 159 T~Fp~~--~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~ 213 (216)
T 3itq_A 159 TFFPKL--NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVRRG 213 (216)
T ss_dssp EEETTT--TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEESS
T ss_pred eEecCC--CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEecC
Confidence 333222 26789999998876531 11222 14689999765456899998887643
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=84.46 E-value=7.5 Score=30.95 Aligned_cols=80 Identities=21% Similarity=0.242 Sum_probs=51.0
Q ss_pred cceEEeeeCCCCCCCCccccCcccCC-----C--ceEEEeecCCCCceEEee---CCeeEECCCCCCeEEEEechhHHHH
Q 040624 144 MLSIFNLYPPCPRPDLAIGLKPHADA-----S--VFTYLIQDKEVEGLQFQK---DDQWYRVPVIPGAFVINVGDQIEIM 213 (273)
Q Consensus 144 ~~lr~~~Yp~~~~~~~~~~~~~H~D~-----~--~lTll~~d~~~~GLqv~~---~g~W~~v~~~~~~~vvnvGd~l~~~ 213 (273)
..+-+|+|.+. . ++++|.|- + ++|+-+.. ..-+.+.. .+....+...+|+++|.-|++- .|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~--~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGL--PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEES--CEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCC--CeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 44778999872 2 78999993 2 23333322 33345543 3567889999999999988762 12
Q ss_pred hCCcccCCCcccccCC-------CCCeeEEEEee
Q 040624 214 SNGIFKSPIHRVVTNT-------ERGRMSLVMFC 240 (273)
Q Consensus 214 T~G~~~s~~HRV~~~~-------~~~R~S~~~F~ 240 (273)
.|.|.... +..|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 47775432 24699999854
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=81.71 E-value=2 Score=37.11 Aligned_cols=107 Identities=14% Similarity=0.160 Sum_probs=67.1
Q ss_pred ccceEEeeeCCCCCCCCccccCcccCCC------ceEEEeecCCCCceEEee-CCeeEECCCCCCeEEEEechhHHHHhC
Q 040624 143 SMLSIFNLYPPCPRPDLAIGLKPHADAS------VFTYLIQDKEVEGLQFQK-DDQWYRVPVIPGAFVINVGDQIEIMSN 215 (273)
Q Consensus 143 ~~~lr~~~Yp~~~~~~~~~~~~~H~D~~------~lTll~~d~~~~GLqv~~-~g~W~~v~~~~~~~vvnvGd~l~~~T~ 215 (273)
...+.+|+|.+ .-++++|.|.. ++|+=+- ...-+.+.. ++.++.+...+|+++|+-|++=..|..
T Consensus 197 ~n~~lvN~Y~~------G~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 197 PDQMTINQYEP------GQGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CSEEEEEEECT------TCCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCEEEEEEecC------CCCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 34577899987 23789999984 3333231 233355554 567889999999999999999988876
Q ss_pred CcccCCCccccc------------------CCCCCeeEEEEeecCCCCCeEecCCCccCCC
Q 040624 216 GIFKSPIHRVVT------------------NTERGRMSLVMFCFPNPNKEIEPVKGLVTGT 258 (273)
Q Consensus 216 G~~~s~~HRV~~------------------~~~~~R~S~~~F~~P~~~~~i~p~~~~~~~~ 258 (273)
|.-+-...-+-. .+...|+|+.|=..+...+.- ..+.+.+..
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C-~~~~~cd~~ 328 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNC-SYPLVCDSQ 328 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCC-SCTTTCTTT
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCC-CCCCcccCC
Confidence 665533222210 012469999998777654432 233444443
No 16
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=49.11 E-value=18 Score=19.06 Aligned_cols=17 Identities=18% Similarity=0.180 Sum_probs=15.1
Q ss_pred HHHHHHHHHHhccccEEE
Q 040624 2 LFAQRLYSALRALYGAVK 19 (273)
Q Consensus 2 ~~~~~l~~A~~~~~Gff~ 19 (273)
.+++.|.-.|.+ -||||
T Consensus 10 ~LVdaL~~vCgd-RGF~~ 26 (30)
T 1m5a_B 10 HLVEALYLVCGE-RGFFY 26 (30)
T ss_dssp HHHHHHHHHHGG-GCEEE
T ss_pred HHHHHHHHHhcc-Ccccc
Confidence 578889999999 99998
No 17
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=34.89 E-value=45 Score=27.86 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=45.6
Q ss_pred ceEEeeeCCCCCCCCccccCcccCC--------CceEEEeecCCCCceEEeeCCeeEECCCCCCeEEEEechhHHHHhCC
Q 040624 145 LSIFNLYPPCPRPDLAIGLKPHADA--------SVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNG 216 (273)
Q Consensus 145 ~lr~~~Yp~~~~~~~~~~~~~H~D~--------~~lTll~~d~~~~GLqv~~~g~W~~v~~~~~~~vvnvGd~l~~~T~G 216 (273)
..|+ .-+| ...+.+|.|. +.+-++..-.+.+|.....+|+-+..+ +|...+. |
T Consensus 93 ~vRl-rL~P------G~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~--~GE~w~~---------d- 153 (290)
T 1e5r_A 93 MARS-RNLK------NAIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMR--PGEIWFL---------D- 153 (290)
T ss_dssp EEEE-EEEE------SEEEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCC--TTEEEEC---------C-
T ss_pred eEEE-EeCC------CCEeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecC--CCCEEEE---------c-
Confidence 3555 5555 2347899998 334444432246677766676544433 3443311 1
Q ss_pred cccCCCcccccCCCCCeeEEEEee
Q 040624 217 IFKSPIHRVVTNTERGRMSLVMFC 240 (273)
Q Consensus 217 ~~~s~~HRV~~~~~~~R~S~~~F~ 240 (273)
-+..|.|...+..+|+.+.+=+
T Consensus 154 --~~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 154 --AATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp --TTSCEEEEESSSSCCCEEEEEE
T ss_pred --CCCeeEEEcCCCCCeEEEEEEe
Confidence 1358999998888999998655
No 18
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=31.55 E-value=46 Score=19.72 Aligned_cols=23 Identities=9% Similarity=0.241 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCchh
Q 040624 111 KIEKLNEMLLKAIARALNLEENC 133 (273)
Q Consensus 111 ~~~~la~~ll~~l~~~Lgl~~~~ 133 (273)
.-.+++..|.+++++.||.|++.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34678888999999999999753
No 19
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=30.62 E-value=2.5e+02 Score=26.10 Aligned_cols=105 Identities=12% Similarity=0.130 Sum_probs=60.6
Q ss_pred HHHHHHHHHcCCCchhhHhhhcCCCccceEEeeeCCCCCCCCccccCcccCC-C--ceEEEeecCC--------CCc-eE
Q 040624 118 MLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADA-S--VFTYLIQDKE--------VEG-LQ 185 (273)
Q Consensus 118 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~H~D~-~--~lTll~~d~~--------~~G-Lq 185 (273)
.+...|+...|++. + .+...-+.+..|++ ......|.|. + .||+++.-+. -+| |+
T Consensus 105 ~Fr~~Ls~iTGi~~--L-----sg~~~D~~~a~Y~~------G~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~ 171 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK--L-----SGSKTDMSINTYTK------GCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLR 171 (633)
T ss_dssp HHHHHHHHHHTCCC--C-----CSSCCCEEEEEECT------TCEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEE
T ss_pred HHHHHHHHHhCCcc--c-----CCCceeEEEEEeCC------CCeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEE
Confidence 34456666677632 1 01112256677876 3456788885 2 3676664321 133 87
Q ss_pred EeeC--------CeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccC-CCCCeeEEEE-eecCCC
Q 040624 186 FQKD--------DQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTN-TERGRMSLVM-FCFPNP 244 (273)
Q Consensus 186 v~~~--------g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~-~~~~R~S~~~-F~~P~~ 244 (273)
++.. .....|.|..|.++++.-. -+ .++|.|... ++..|+||+- |..|..
T Consensus 172 Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 172 LFPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp ECCEEETTEECSSCSEEECCCTTEEEEEECC------TT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 7762 1366789999999887531 01 257876422 2689999965 445544
No 20
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=30.40 E-value=43 Score=20.14 Aligned_cols=22 Identities=18% Similarity=0.052 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHcCCCchh
Q 040624 112 IEKLNEMLLKAIARALNLEENC 133 (273)
Q Consensus 112 ~~~la~~ll~~l~~~Lgl~~~~ 133 (273)
-.+++..|.+++++.||.+++.
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHhCCCccc
Confidence 3677888899999999998754
No 21
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=27.20 E-value=64 Score=19.11 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCch
Q 040624 111 KIEKLNEMLLKAIARALNLEEN 132 (273)
Q Consensus 111 ~~~~la~~ll~~l~~~Lgl~~~ 132 (273)
.-.+++..|.+++.+.||++++
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~ 36 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLE 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcc
Confidence 4467888899999999999875
No 22
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=27.06 E-value=44 Score=16.91 Aligned_cols=16 Identities=13% Similarity=0.283 Sum_probs=11.4
Q ss_pred CCc-eEEeeCCeeEECC
Q 040624 181 VEG-LQFQKDDQWYRVP 196 (273)
Q Consensus 181 ~~G-Lqv~~~g~W~~v~ 196 (273)
..| ..|+.+|.|+...
T Consensus 8 ~Dg~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 8 RDAQAYVRKFGEWVLLS 24 (27)
T ss_dssp SSSCEEEEETTEEEEGG
T ss_pred cCcceeEEEcCeEEEcc
Confidence 344 5677899999764
No 23
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=26.04 E-value=70 Score=18.87 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCch
Q 040624 111 KIEKLNEMLLKAIARALNLEEN 132 (273)
Q Consensus 111 ~~~~la~~ll~~l~~~Lgl~~~ 132 (273)
.-.+++..|.+++++.||++++
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~ 36 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEE 36 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcC
Confidence 3467888899999999999875
No 24
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.49 E-value=35 Score=21.95 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhh
Q 040624 99 QSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMY 138 (273)
Q Consensus 99 ~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~ 138 (273)
.+-+..+++|+..-.+-...-+..||+.+||+.+...-.+
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 4567788889888888888888999999999998766555
No 25
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=25.30 E-value=65 Score=25.18 Aligned_cols=42 Identities=17% Similarity=0.239 Sum_probs=28.8
Q ss_pred EEechhHHHHhCCccc----CCCcccccCCCCCeeEEEE-eecCCCC
Q 040624 204 INVGDQIEIMSNGIFK----SPIHRVVTNTERGRMSLVM-FCFPNPN 245 (273)
Q Consensus 204 vnvGd~l~~~T~G~~~----s~~HRV~~~~~~~R~S~~~-F~~P~~~ 245 (273)
+.||+.-..|..|..- +-.|.|...+.++|+-+.+ |.+|+..
T Consensus 141 i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl~ 187 (197)
T 3rcq_A 141 IRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELT 187 (197)
T ss_dssp EEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTSC
T ss_pred EEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCCC
Confidence 4455555566666543 6789999888889988765 6667653
No 26
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=23.78 E-value=80 Score=25.62 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=29.6
Q ss_pred HHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhh
Q 040624 5 QRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFF 41 (273)
Q Consensus 5 ~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 41 (273)
+++.+.+.+ .||+.|.|- ++.+.++++.+...+++
T Consensus 22 ~~~~~~f~~-dGyvvl~~~-l~~e~v~~l~~~~~~~~ 56 (288)
T 2rdq_A 22 AALDSFYEE-HGYLFLRNV-LDRDLVKTVAEQMREGL 56 (288)
T ss_dssp HHHHHHHHH-HSEEEECSC-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 457888999 999999986 88999999888888764
No 27
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=23.58 E-value=40 Score=24.10 Aligned_cols=25 Identities=8% Similarity=0.199 Sum_probs=19.8
Q ss_pred cCCCcccccCCCCCeeEEEEeecCCC
Q 040624 219 KSPIHRVVTNTERGRMSLVMFCFPNP 244 (273)
Q Consensus 219 ~s~~HRV~~~~~~~R~S~~~F~~P~~ 244 (273)
+-.+|||. .++.-|+.+-||+.|..
T Consensus 78 Pq~wHrVe-~sdD~~f~leFyc~~~d 102 (119)
T 3dl3_A 78 PQYWHRIE-LSDDAQFNINFWSDQDK 102 (119)
T ss_dssp TTCEEEEE-ECTTCEEEEEEEECC--
T ss_pred CCceEEEE-ECCCeEEEEEEEECchH
Confidence 35789999 67778999999999985
No 28
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=23.31 E-value=88 Score=18.94 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCchh
Q 040624 110 AKIEKLNEMLLKAIARALNLEENC 133 (273)
Q Consensus 110 ~~~~~la~~ll~~l~~~Lgl~~~~ 133 (273)
+.-.+|+..|.+++.+.+|++++.
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345678888999999999998753
No 29
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=21.40 E-value=1e+02 Score=18.83 Aligned_cols=24 Identities=17% Similarity=0.223 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCchh
Q 040624 110 AKIEKLNEMLLKAIARALNLEENC 133 (273)
Q Consensus 110 ~~~~~la~~ll~~l~~~Lgl~~~~ 133 (273)
+.-.+|...|.+++++.||++++.
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHCcCccc
Confidence 345678888899999999998753
No 30
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=21.36 E-value=1.1e+02 Score=17.21 Aligned_cols=39 Identities=15% Similarity=0.362 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhh
Q 040624 100 SFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMY 138 (273)
Q Consensus 100 ~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~ 138 (273)
.....+.+|.+.-.++...-+.-.+.-||+.....+..+
T Consensus 7 everklkefvrrhqeitqetlheyaqklglnqqaieqff 45 (52)
T 1y66_A 7 EVERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQFF 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHH
Confidence 456677888888899999988888999988776555443
No 31
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=21.09 E-value=1.1e+02 Score=24.96 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhh
Q 040624 2 LFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFF 41 (273)
Q Consensus 2 ~~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 41 (273)
+..++|++|+.+ +|.+.+.+..++.+ +..+.++.|=
T Consensus 28 ~~~~~l~~~l~~-~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 28 EERDAIEQALLQ-HQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp HHHHHHHHHHHH-HSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred HHHHHHHHHHHH-CCEEEECCCCCCHH---HHHHHHHHhC
Confidence 457899999999 99999999988765 4445666653
No 32
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=21.00 E-value=94 Score=19.62 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCchhh
Q 040624 110 AKIEKLNEMLLKAIARALNLEENCF 134 (273)
Q Consensus 110 ~~~~~la~~ll~~l~~~Lgl~~~~~ 134 (273)
+.-.+++..|.+++.+.||++++..
T Consensus 15 eqk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 15 QQKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCCceE
Confidence 3446788899999999999997643
No 33
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=20.71 E-value=79 Score=25.74 Aligned_cols=37 Identities=3% Similarity=-0.001 Sum_probs=31.0
Q ss_pred HHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhC
Q 040624 4 AQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFG 42 (273)
Q Consensus 4 ~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 42 (273)
.++..+.+.+ .||+.|.|- ++.+.++++.+...++++
T Consensus 5 t~e~~~~f~~-dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 41 (291)
T 2opw_A 5 SPSQLQKFQQ-DGFLVLEGF-LSAEECVAMQQRIGEIVA 41 (291)
T ss_dssp CHHHHHHHHH-HSEEEETTS-SCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh-CCEEEecCC-CCHHHHHHHHHHHHHHHh
Confidence 4567788999 999999986 889999999888887764
Done!