Your job contains 1 sequence.
>040625
CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIESFELDYDGKRDRWNGFDPATYALVIE
RYEARDEARRKYLKEQQLKKLEEKNSKQNGEGGVSEEDDDEDALKVDEAKVDESKQMDFA
KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEK
FYGGDNQNRLSGQALEFKQLNNYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQS
ERQVEYDRAGRIIQGVESFLPRSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNL
MKANVARKAASEDMRAPAEEKNLATWGTDVPDNLNLDQKQLAEALRKEDERKKEEKDERK
RKYNVRWNDEVTAEEMEAYRMKKIHHDDPMKDFLY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040625
(395 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018496 - symbol:SMP1 "SWELLMAP 1" species:370... 701 3.6e-135 2
TAIR|locus:2115115 - symbol:SMP2 "SWELLMAP 2" species:370... 697 3.2e-134 2
UNIPROTKB|F1NNB9 - symbol:SLU7 "Pre-mRNA-splicing factor ... 270 2.1e-69 4
UNIPROTKB|Q5ZIG2 - symbol:SLU7 "Pre-mRNA-splicing factor ... 264 3.9e-69 4
TAIR|locus:2077157 - symbol:AT3G45950 species:3702 "Arabi... 603 1.1e-68 2
UNIPROTKB|F1NRP0 - symbol:SLU7 "Pre-mRNA-splicing factor ... 384 1.3e-68 3
UNIPROTKB|F1RR54 - symbol:SLU7 "Uncharacterized protein" ... 378 3.7e-68 3
RGD|631432 - symbol:Slu7 "SLU7 splicing factor homolog (S... 381 8.2e-68 3
MGI|MGI:2385598 - symbol:Slu7 "SLU7 splicing factor homol... 380 1.0e-67 3
UNIPROTKB|Q3ZBE5 - symbol:SLU7 "Pre-mRNA-splicing factor ... 377 1.6e-67 3
UNIPROTKB|O95391 - symbol:SLU7 "Pre-mRNA-splicing factor ... 380 3.6e-67 3
UNIPROTKB|E2RRD5 - symbol:SLU7 "Uncharacterized protein" ... 380 1.0e-66 3
FB|FBgn0039626 - symbol:Slu7 "Slu7" species:7227 "Drosoph... 288 1.7e-63 4
DICTYBASE|DDB_G0281901 - symbol:slu7 "putative RNA splici... 231 2.9e-62 4
WB|WBGene00010629 - symbol:K07C5.6 species:6239 "Caenorha... 238 8.1e-53 4
UNIPROTKB|Q51LA6 - symbol:SLU7 "Pre-mRNA-splicing factor ... 428 3.3e-40 1
ZFIN|ZDB-GENE-041114-62 - symbol:slu7 "SLU7 splicing fact... 373 3.6e-40 2
ASPGD|ASPL0000074217 - symbol:AN4788 species:162425 "Emer... 241 5.6e-39 2
GENEDB_PFALCIPARUM|PFF0500c - symbol:PFF0500c "step II sp... 230 5.3e-30 2
UNIPROTKB|C6KSU8 - symbol:PFF0500c "Step II splicing fact... 230 5.3e-30 2
POMBASE|SPBC365.05c - symbol:slu7 "splicing factor Slu7" ... 220 1.4e-20 2
SGD|S000002495 - symbol:SLU7 "RNA splicing factor" specie... 102 1.7e-08 2
CGD|CAL0005702 - symbol:SLU7 species:5476 "Candida albica... 103 4.0e-05 2
>TAIR|locus:2018496 [details] [associations]
symbol:SMP1 "SWELLMAP 1" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA;IMP] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0030422 "production of siRNA involved
in RNA interference" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048522 "positive regulation of cellular process"
evidence=RCA] [GO:0051276 "chromosome organization" evidence=RCA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008380 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0003727 GO:GO:0006397 GO:GO:0005681
EMBL:AC001229 EMBL:AC007234 EMBL:BT002797 IPI:IPI00532994
PIR:E96681 RefSeq:NP_564859.2 UniGene:At.35860 PaxDb:Q9SHY8
PRIDE:Q9SHY8 EnsemblPlants:AT1G65660.1 GeneID:842877
KEGG:ath:AT1G65660 TAIR:At1g65660 eggNOG:NOG251791
HOGENOM:HOG000194391 InParanoid:Q9SHY8 KO:K12819 OMA:PQTLMEM
PhylomeDB:Q9SHY8 ProtClustDB:CLSN2684786 Genevestigator:Q9SHY8
InterPro:IPR021715 Pfam:PF11708 Uniprot:Q9SHY8
Length = 535
Score = 701 (251.8 bits), Expect = 3.6e-135, Sum P(2) = 3.6e-135
Identities = 137/201 (68%), Positives = 152/201 (75%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIESFELDYDGKRDRWNGFDPATYALVIE 60
CGAMTH AK+CM+RPRKIGAK+TNM+IAPDEKIESFELDYDGKRDRWNG+DP+TY VI+
Sbjct: 99 CGAMTHTAKACMDRPRKIGAKYTNMNIAPDEKIESFELDYDGKRDRWNGYDPSTYHRVID 158
Query: 61 RYEARDEARRXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXALKVDEAKVDESKQMDFA 120
YEA+++AR+ L+VDEAKVDES+QMDFA
Sbjct: 159 LYEAKEDARKKYLKEQQLKKLEEKNNNEKGDDANSDGEEDEDDLRVDEAKVDESRQMDFA 218
Query: 121 KVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEK 180
KVEKRVR VRNLRIREDTAKYLLNLDVNSA+YDPKTRSMREDPLPDADPN+K
Sbjct: 219 KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDK 278
Query: 181 FYGGDNQNRLSGQALEFKQLN 201
FY GDNQ R SGQALEFKQLN
Sbjct: 279 FYLGDNQYRNSGQALEFKQLN 299
Score = 644 (231.8 bits), Expect = 3.6e-135, Sum P(2) = 3.6e-135
Identities = 123/209 (58%), Positives = 154/209 (73%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KEKLKS+ KD I +KYGNAA+E+EIP ELLLGQSERQVEYDRAGRII+G E LP
Sbjct: 327 SFQVAKEKLKSQTKDTIMDKYGNAATEDEIPMELLLGQSERQVEYDRAGRIIKGQEVILP 386
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNN----------------LMKANV 305
+SKYEEDV+ NNHTSVWGS+WKDHQWGYKCC+Q I+N+ LMKAN+
Sbjct: 387 KSKYEEDVHANNHTSVWGSYWKDHQWGYKCCQQIIRNSYCTGSAGIEAAEAALDLMKANI 446
Query: 306 ARKAASEDMRAPAEEKNLATWGTDVPDNLNLDQKQLAEALXXXXXXXXXXXXXXXXXYNV 365
ARK A+E+ EEK +A+WGTD+P++L L+++ LA AL YNV
Sbjct: 447 ARKEATEESPKKVEEKRMASWGTDIPEDLELNEEALANALKKEDLSRREEKDERKRKYNV 506
Query: 366 RWNDEVTAEEMEAYRMKKIHHDDPMKDFL 394
++N++VT EEMEAYRMK++HH+DPMKDFL
Sbjct: 507 KYNNDVTPEEMEAYRMKRVHHEDPMKDFL 535
>TAIR|locus:2115115 [details] [associations]
symbol:SMP2 "SWELLMAP 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;RCA] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0051276 "chromosome organization"
evidence=RCA] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0003727 GO:GO:0006397
GO:GO:0005681 EMBL:Z99707 EMBL:AL161590 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 ProtClustDB:CLSN2684786
InterPro:IPR021715 Pfam:PF11708 EMBL:AY056418 IPI:IPI00533640
PIR:E85438 RefSeq:NP_568017.1 UniGene:At.4652 PaxDb:O23174
PRIDE:O23174 EnsemblPlants:AT4G37120.1 GeneID:829866
KEGG:ath:AT4G37120 TAIR:At4g37120 InParanoid:O23174 OMA:DSAKYDP
PhylomeDB:O23174 Genevestigator:O23174 Uniprot:O23174
Length = 536
Score = 697 (250.4 bits), Expect = 3.2e-134, Sum P(2) = 3.2e-134
Identities = 135/201 (67%), Positives = 153/201 (76%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIESFELDYDGKRDRWNGFDPATYALVIE 60
CGAMTH++K+CM+RPRKIGAK+TNM+IA DEKIESFELDYDGKRDRWNG+D +TY V++
Sbjct: 99 CGAMTHSSKACMDRPRKIGAKYTNMNIAADEKIESFELDYDGKRDRWNGYDTSTYRHVVD 158
Query: 61 RYEARDEARRXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXALKVDEAKVDESKQMDFA 120
RY+A++EAR+ N L+VDEAKVDES+QMDFA
Sbjct: 159 RYDAKEEARKKYLKEQQLKKLEEKNNNENGDDATSDGEEDLDDLRVDEAKVDESRQMDFA 218
Query: 121 KVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEK 180
KVEKRVR VRNLRIREDTAKYLLNLDVNSA+YDPKTRSMREDPLPDADPNEK
Sbjct: 219 KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEK 278
Query: 181 FYGGDNQNRLSGQALEFKQLN 201
FY GDNQ R SGQALEFKQ+N
Sbjct: 279 FYLGDNQYRNSGQALEFKQIN 299
Score = 639 (230.0 bits), Expect = 3.2e-134, Sum P(2) = 3.2e-134
Identities = 120/208 (57%), Positives = 152/208 (73%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
N+ V KEKLK++ KD I EKYGNAA+E EIP ELLLGQSERQ+EYDRAGRI++G E +P
Sbjct: 327 NFKVAKEKLKTQTKDTIMEKYGNAATEGEIPMELLLGQSERQIEYDRAGRIMKGQEVIIP 386
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNN----------------LMKANV 305
+SKYEEDV+ NNHTSVWGSWWKDHQWGYKCC+QTI+N+ LMKAN+
Sbjct: 387 KSKYEEDVHANNHTSVWGSWWKDHQWGYKCCQQTIRNSYCTGSAGIEAAEASIDLMKANI 446
Query: 306 ARKAASEDMRAPAEEKNLATWGTDVPDNLNLDQKQLAEALXXXXXXXXXXXXXXXXXYNV 365
ARK AS++ EEK +ATWGTD+P++L L+++ LA AL YNV
Sbjct: 447 ARKEASKESPKKVEEKKMATWGTDIPEDLELNEEALANALKKEDLSRREEKDERKRKYNV 506
Query: 366 RWNDEVTAEEMEAYRMKKIHHDDPMKDF 393
+ ++VT+EEMEAYRMK++HH+DPM++F
Sbjct: 507 NYTNDVTSEEMEAYRMKRVHHEDPMRNF 534
>UNIPROTKB|F1NNB9 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0008270 GO:GO:0003676 InterPro:IPR021715
Pfam:PF11708 GeneTree:ENSGT00390000002292 IPI:IPI00600893
EMBL:AADN02035864 Ensembl:ENSGALT00000041066 ArrayExpress:F1NNB9
Uniprot:F1NNB9
Length = 564
Score = 270 (100.1 bits), Expect = 2.1e-69, Sum P(4) = 2.1e-69
Identities = 52/126 (41%), Positives = 76/126 (60%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K++ K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 337 SFKVKKEDFKAQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQEKAIA 396
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASEDMRA----P 317
SKYEEDV INNHT +WGS+WK+ +WGY+CC +K + ++ A+ + P
Sbjct: 397 CSKYEEDVKINNHTCIWGSYWKEGKWGYRCCHSFVKFSYCTGEAGKEIANAEANLLEEQP 456
Query: 318 AEEKNL 323
EE+++
Sbjct: 457 REEEHM 462
Score = 233 (87.1 bits), Expect = 2.1e-69, Sum P(4) = 2.1e-69
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGA+TH K CMERPRK+GAK+T M+IAPDE ++ DYDGKRDRWNG++P + ++
Sbjct: 121 CGALTHKKKDCMERPRKVGAKYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIV 180
Query: 60 ERYEARDEARR 70
E Y D A+R
Sbjct: 181 EEYAKVDLAKR 191
Score = 189 (71.6 bits), Expect = 2.1e-69, Sum P(4) = 2.1e-69
Identities = 43/90 (47%), Positives = 53/90 (58%)
Query: 112 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDP 171
DE K D ++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P
Sbjct: 220 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 277
Query: 172 LPDA--DPNEKFYGGDNQNRLSGQALEFKQ 199
+ +P+E Y GDN R +G + Q
Sbjct: 278 YANTGKNPDEVGYAGDNFVRYTGDTISMAQ 307
Score = 80 (33.2 bits), Expect = 2.1e-69, Sum P(4) = 2.1e-69
Identities = 19/32 (59%), Positives = 20/32 (62%)
Query: 363 YN-VRWNDEVTAEEMEAYRMKKIHHDDPMKDF 393
YN V E T EEMEAYRMK+ DDPM F
Sbjct: 530 YNSVYETREPTEEEMEAYRMKRQRPDDPMASF 561
Score = 53 (23.7 bits), Expect = 3.0e-55, Sum P(4) = 3.0e-55
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 106 VDE-AKVDESKQ-MDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPK 163
V+E AKVD +K+ + K+++ + N ED KY ++D+ +D K
Sbjct: 180 VEEYAKVDLAKRTLKAQKLQEELASGKLEQVERDHNSE-DEDEDKYADDIDMPGQNFDSK 238
Query: 164 TR------SMREDP---LPDADPNEKFY 182
R +RED L + DPN +Y
Sbjct: 239 RRITVRNLRIREDIAKYLRNLDPNSAYY 266
>UNIPROTKB|Q5ZIG2 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819
InterPro:IPR021715 Pfam:PF11708 CTD:10569 HOVERGEN:HBG053287
OrthoDB:EOG42RD76 EMBL:AJ720822 IPI:IPI00600893
RefSeq:NP_001006146.1 UniGene:Gga.20067 STRING:Q5ZIG2 PRIDE:Q5ZIG2
GeneID:416157 KEGG:gga:416157 NextBio:20819662 Uniprot:Q5ZIG2
Length = 564
Score = 264 (98.0 bits), Expect = 3.9e-69, Sum P(4) = 3.9e-69
Identities = 52/126 (41%), Positives = 75/126 (59%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K++ K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 337 SFKVKKEDFKAQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQEKAIA 396
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASEDMRA----P 317
SK EEDV INNHT +WGS+WK+ +WGYKCC +K + ++ A+ + P
Sbjct: 397 CSKNEEDVKINNHTCIWGSYWKEGKWGYKCCHSFVKFSYCTGEAGKEIANAEANLLEEQP 456
Query: 318 AEEKNL 323
EE+++
Sbjct: 457 REEEHM 462
Score = 233 (87.1 bits), Expect = 3.9e-69, Sum P(4) = 3.9e-69
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGA+TH K CMERPRK+GAK+T M+IAPDE ++ DYDGKRDRWNG++P + ++
Sbjct: 121 CGALTHKKKDCMERPRKVGAKYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIV 180
Query: 60 ERYEARDEARR 70
E Y D A+R
Sbjct: 181 EEYAKVDLAKR 191
Score = 189 (71.6 bits), Expect = 3.9e-69, Sum P(4) = 3.9e-69
Identities = 43/90 (47%), Positives = 53/90 (58%)
Query: 112 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDP 171
DE K D ++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P
Sbjct: 220 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 277
Query: 172 LPDA--DPNEKFYGGDNQNRLSGQALEFKQ 199
+ +P+E Y GDN R +G + Q
Sbjct: 278 YANTGKNPDEVGYAGDNFVRYTGDTISMAQ 307
Score = 84 (34.6 bits), Expect = 3.9e-69, Sum P(4) = 3.9e-69
Identities = 20/33 (60%), Positives = 21/33 (63%)
Query: 363 YN-VRWNDEVTAEEMEAYRMKKIHHDDPMKDFL 394
YN V E T EEMEAYRMK+ DDPM FL
Sbjct: 530 YNSVYETREPTEEEMEAYRMKRQRPDDPMASFL 562
Score = 53 (23.7 bits), Expect = 5.6e-55, Sum P(4) = 5.6e-55
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 106 VDE-AKVDESKQ-MDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPK 163
V+E AKVD +K+ + K+++ + N ED KY ++D+ +D K
Sbjct: 180 VEEYAKVDLAKRTLKAQKLQEELASGKLEQVERDHNSE-DEDEDKYADDIDMPGQNFDSK 238
Query: 164 TR------SMREDP---LPDADPNEKFY 182
R +RED L + DPN +Y
Sbjct: 239 RRITVRNLRIREDIAKYLRNLDPNSAYY 266
>TAIR|locus:2077157 [details] [associations]
symbol:AT3G45950 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003676 EMBL:AL162459
HOGENOM:HOG000194391 KO:K12819 ProtClustDB:CLSN2684786
InterPro:IPR021715 Pfam:PF11708 IPI:IPI00542568 PIR:T47535
RefSeq:NP_190181.1 UniGene:At.65253 PaxDb:Q9LZT6 PRIDE:Q9LZT6
EnsemblPlants:AT3G45950.1 GeneID:823738 KEGG:ath:AT3G45950
TAIR:At3g45950 eggNOG:NOG305850 InParanoid:Q9LZT6 OMA:DDIPMEL
PhylomeDB:Q9LZT6 Genevestigator:Q9LZT6 Uniprot:Q9LZT6
Length = 385
Score = 603 (217.3 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 122/204 (59%), Positives = 142/204 (69%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIESFELDYDGKRDRWNGFDPATYALVIE 60
CGAMTH+ K+CMERPRK+GAK+T+ +IAPDEKIES E DYDGKRDRWNG+DP++Y V +
Sbjct: 99 CGAMTHDVKTCMERPRKVGAKYTDKNIAPDEKIESLEFDYDGKRDRWNGYDPSSYCHVRD 158
Query: 61 RYEARDEARRXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXALKVDEAKVDESKQMDFA 120
R+EA++ AR L+VDEAK+DES Q+DFA
Sbjct: 159 RHEAKENAREKYLNEQQLIAKLEEKNIDGEEED----------LRVDEAKIDESMQVDFA 208
Query: 121 KVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEK 180
KV+KRVR VRNLRIRED AKYLLNLDVNSAYYDPK+RSMREDPLP DPNEK
Sbjct: 209 KVKKRVRTTDGGSKGTVRNLRIREDPAKYLLNLDVNSAYYDPKSRSMREDPLPYTDPNEK 268
Query: 181 FYGGDNQNRLSGQALEFKQLNNYN 204
F DNQ R SGQA+EFKQ N Y+
Sbjct: 269 FCLRDNQYRNSGQAIEFKQQNMYS 292
Score = 112 (44.5 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 205 VIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSE 241
+ KEKL S+ KD I KYG+AA++++IP ELLLGQS+
Sbjct: 320 IAKEKLNSQRKDAIIAKYGDAAAKDDIPMELLLGQSK 356
>UNIPROTKB|F1NRP0 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IEA] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878 SMART:SM00343
GO:GO:0005737 GO:GO:0006886 GO:GO:0033554 GO:GO:0016607
GO:GO:0008270 GO:GO:0071013 GO:GO:0030532 GO:GO:0000380
GO:GO:0000389 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:AADN02035864 IPI:IPI00818963 Ensembl:ENSGALT00000002279
ArrayExpress:F1NRP0 Uniprot:F1NRP0
Length = 582
Score = 384 (140.2 bits), Expect = 1.3e-68, Sum P(3) = 1.3e-68
Identities = 83/203 (40%), Positives = 107/203 (52%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGA+TH K CMERPRK+GAK+T M+IAPDE ++ DYDGKRDRWNG++P + ++
Sbjct: 123 CGALTHKKKDCMERPRKVGAKYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIV 182
Query: 60 ERYEARDEARRXXXXXXXXXXXXXXXXXX-NXXXXXXXXXXXXXALKVDEAKVDESKQMD 118
E Y D A+R N + D DE +
Sbjct: 183 EEYAKVDLAKRTLKAQKLQEELASGKLEQVNSPRHQWGEEEPNSQTERDHNSEDEDEDKY 242
Query: 119 FAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA--D 176
++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P + +
Sbjct: 243 ADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANTGKN 302
Query: 177 PNEKFYGGDNQNRLSGQALEFKQ 199
P+E Y GDN R +G + Q
Sbjct: 303 PDEVGYAGDNFVRYTGDTISMAQ 325
Score = 270 (100.1 bits), Expect = 1.3e-68, Sum P(3) = 1.3e-68
Identities = 52/126 (41%), Positives = 76/126 (60%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K++ K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 355 SFKVKKEDFKAQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQEKAIA 414
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASEDMRA----P 317
SKYEEDV INNHT +WGS+WK+ +WGY+CC +K + ++ A+ + P
Sbjct: 415 CSKYEEDVKINNHTCIWGSYWKEGKWGYRCCHSFVKFSYCTGEAGKEIANAEANLLEEQP 474
Query: 318 AEEKNL 323
EE+++
Sbjct: 475 REEEHM 480
Score = 80 (33.2 bits), Expect = 1.3e-68, Sum P(3) = 1.3e-68
Identities = 19/32 (59%), Positives = 20/32 (62%)
Query: 363 YN-VRWNDEVTAEEMEAYRMKKIHHDDPMKDF 393
YN V E T EEMEAYRMK+ DDPM F
Sbjct: 548 YNSVYETREPTEEEMEAYRMKRQRPDDPMASF 579
>UNIPROTKB|F1RR54 [details] [associations]
symbol:SLU7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 SMART:SM00343 GO:GO:0005737
GO:GO:0006886 GO:GO:0033554 GO:GO:0016607 GO:GO:0008270
GO:GO:0071013 GO:GO:0030532 GO:GO:0000380 GO:GO:0000389 KO:K12819
OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:CU571129 EMBL:CU928350 RefSeq:XP_003134141.1 UniGene:Ssc.83723
Ensembl:ENSSSCT00000018545 GeneID:100517791 KEGG:ssc:100517791
Uniprot:F1RR54
Length = 586
Score = 378 (138.1 bits), Expect = 3.7e-68, Sum P(3) = 3.7e-68
Identities = 83/204 (40%), Positives = 106/204 (51%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGAMTH K C ERPR++GAK+T +IAPDE I+ DYDGKRDRWNG++P + ++
Sbjct: 123 CGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHIQPQLMFDYDGKRDRWNGYNPEEHMKIV 182
Query: 60 ERYEARDEARRXXXXXXXXXXXXXXXXX--XNXXXXXXXXXXXXXALKVDEAKVDESKQM 117
E Y D A+R N + D DE +
Sbjct: 183 EEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQTEKDHNSEDEDEDK 242
Query: 118 DFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA-- 175
++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P +A
Sbjct: 243 YADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGK 302
Query: 176 DPNEKFYGGDNQNRLSGQALEFKQ 199
+P+E Y GDN R +G + Q
Sbjct: 303 NPDEVSYAGDNFVRYTGDTISMAQ 326
Score = 270 (100.1 bits), Expect = 3.7e-68, Sum P(3) = 3.7e-68
Identities = 51/112 (45%), Positives = 68/112 (60%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K + K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 356 SFKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVA 415
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASED 313
SKYEEDV INNHT +WGS+WKD +WGYKCC K + ++ A+ +
Sbjct: 416 CSKYEEDVKINNHTHIWGSYWKDGRWGYKCCHSFFKYSYCTGEAGKEIANSE 467
Score = 84 (34.6 bits), Expect = 3.7e-68, Sum P(3) = 3.7e-68
Identities = 20/33 (60%), Positives = 21/33 (63%)
Query: 363 YN-VRWNDEVTAEEMEAYRMKKIHHDDPMKDFL 394
YN V E T EEMEAYRMK+ DDPM FL
Sbjct: 552 YNSVYETREPTEEEMEAYRMKRQRPDDPMASFL 584
>RGD|631432 [details] [associations]
symbol:Slu7 "SLU7 splicing factor homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISS] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS] [GO:0030532
"small nuclear ribonucleoprotein complex" evidence=ISS] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=ISS] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878
PROSITE:PS50158 SMART:SM00343 RGD:631432 GO:GO:0005737
GO:GO:0006886 GO:GO:0033554 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 UniGene:Rn.137183 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 CTD:10569 GeneTree:ENSGT00390000002292
HOVERGEN:HBG053287 OrthoDB:EOG42RD76 GO:GO:0030628 GO:GO:0000386
EMBL:AY207315 EMBL:AABR03074285 EMBL:AABR03076495 EMBL:BC062243
IPI:IPI00197160 RefSeq:NP_001094020.1 STRING:Q80ZG5
PhosphoSite:Q80ZG5 PRIDE:Q80ZG5 Ensembl:ENSRNOT00000005132
GeneID:303057 KEGG:rno:303057 UCSC:RGD:631432 InParanoid:Q80ZG5
NextBio:650615 ArrayExpress:Q80ZG5 Genevestigator:Q80ZG5
Uniprot:Q80ZG5
Length = 586
Score = 381 (139.2 bits), Expect = 8.2e-68, Sum P(3) = 8.2e-68
Identities = 83/204 (40%), Positives = 107/204 (52%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGAMTH K C ERPR++GAK+T +IAPDE I+ DYDGKRDRWNG++P + ++
Sbjct: 123 CGAMTHKRKDCFERPRRVGAKFTGTNIAPDEHIQPQLMFDYDGKRDRWNGYNPEEHMKIV 182
Query: 60 ERYEARDEARRXXXXXXXXXXXXXXXXX--XNXXXXXXXXXXXXXALKVDEAKVDESKQM 117
E Y D A+R N ++ D DE +
Sbjct: 183 EEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDEDK 242
Query: 118 DFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA-- 175
++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P +A
Sbjct: 243 YADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGK 302
Query: 176 DPNEKFYGGDNQNRLSGQALEFKQ 199
+P+E Y GDN R +G + Q
Sbjct: 303 NPDEVSYAGDNFVRYTGDTISMAQ 326
Score = 264 (98.0 bits), Expect = 8.2e-68, Sum P(3) = 8.2e-68
Identities = 49/112 (43%), Positives = 68/112 (60%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K + K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 356 SFKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVA 415
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASED 313
SKYEEDV INNHT +WGS+WK+ +WGYKCC K + +++ + +
Sbjct: 416 CSKYEEDVKINNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKESVNSE 467
Score = 83 (34.3 bits), Expect = 8.2e-68, Sum P(3) = 8.2e-68
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 370 EVTAEEMEAYRMKKIHHDDPMKDFL 394
E T EEMEAYRMK+ DDPM FL
Sbjct: 560 EPTEEEMEAYRMKRQRPDDPMASFL 584
>MGI|MGI:2385598 [details] [associations]
symbol:Slu7 "SLU7 splicing factor homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISO] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=ISO]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISO] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISO] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=ISO] [GO:0033554
"cellular response to stress" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
MGI:MGI:2385598 GO:GO:0005737 GO:GO:0006886 GO:GO:0033554
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0005681
GO:GO:0071013 GO:GO:0030532 EMBL:AL670472 GO:GO:0000380
GO:GO:0000389 eggNOG:NOG251791 KO:K12819 OMA:PQTLMEM
InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 HOVERGEN:HBG053287 OrthoDB:EOG42RD76
GO:GO:0030628 GO:GO:0000386 ChiTaRS:SLU7 EMBL:AK029117
EMBL:AK046262 EMBL:AK047597 EMBL:AK049178 EMBL:BC013810
EMBL:BC023057 EMBL:BC060954 EMBL:BC082780 EMBL:BC106099
IPI:IPI00221882 RefSeq:NP_683514.2 RefSeq:NP_945174.1
UniGene:Mm.28200 ProteinModelPortal:Q8BHJ9 STRING:Q8BHJ9
PhosphoSite:Q8BHJ9 PaxDb:Q8BHJ9 PRIDE:Q8BHJ9 DNASU:193116
Ensembl:ENSMUST00000020681 Ensembl:ENSMUST00000151880
Ensembl:ENSMUST00000178622 GeneID:193116 KEGG:mmu:193116
UCSC:uc007imp.1 InParanoid:Q8BHJ9 NextBio:371430 Bgee:Q8BHJ9
CleanEx:MM_SLU7 Genevestigator:Q8BHJ9 Uniprot:Q8BHJ9
Length = 585
Score = 380 (138.8 bits), Expect = 1.0e-67, Sum P(3) = 1.0e-67
Identities = 82/204 (40%), Positives = 107/204 (52%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGAMTH K C ERPR++GAK+T +IAPDE ++ DYDGKRDRWNG++P + ++
Sbjct: 123 CGAMTHKRKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIV 182
Query: 60 ERYEARDEARRXXXXXXXXXXXXXXXXX--XNXXXXXXXXXXXXXALKVDEAKVDESKQM 117
E Y D A+R N ++ D DE +
Sbjct: 183 EEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDEDK 242
Query: 118 DFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA-- 175
++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P +A
Sbjct: 243 YADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGK 302
Query: 176 DPNEKFYGGDNQNRLSGQALEFKQ 199
+P+E Y GDN R +G + Q
Sbjct: 303 NPDEVSYAGDNFVRYTGDTISMAQ 326
Score = 264 (98.0 bits), Expect = 1.0e-67, Sum P(3) = 1.0e-67
Identities = 49/112 (43%), Positives = 68/112 (60%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K + K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 356 SFKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVA 415
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASED 313
SKYEEDV INNHT +WGS+WK+ +WGYKCC K + +++ + +
Sbjct: 416 CSKYEEDVKINNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKESVNSE 467
Score = 83 (34.3 bits), Expect = 1.0e-67, Sum P(3) = 1.0e-67
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 370 EVTAEEMEAYRMKKIHHDDPMKDFL 394
E T EEMEAYRMK+ DDPM FL
Sbjct: 559 EPTEEEMEAYRMKRQRPDDPMASFL 583
>UNIPROTKB|Q3ZBE5 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0033554 "cellular
response to stress" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=IEA] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0006886 GO:GO:0033554 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 eggNOG:NOG251791 HOGENOM:HOG000194391
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 EMBL:BC103394
IPI:IPI00709999 RefSeq:NP_001160089.1 UniGene:Bt.105667
STRING:Q3ZBE5 PRIDE:Q3ZBE5 Ensembl:ENSBTAT00000011131 GeneID:512318
KEGG:bta:512318 CTD:10569 GeneTree:ENSGT00390000002292
HOVERGEN:HBG053287 InParanoid:Q3ZBE5 OrthoDB:EOG42RD76
NextBio:20870335 GO:GO:0030628 GO:GO:0000386 Uniprot:Q3ZBE5
Length = 586
Score = 377 (137.8 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 82/204 (40%), Positives = 106/204 (51%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGAMTH K C ERPR++GAK+T +IAPDE ++ DYDGKRDRWNG++P + ++
Sbjct: 123 CGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIV 182
Query: 60 ERYEARDEARRXXXXXXXXXXXXXXXXX--XNXXXXXXXXXXXXXALKVDEAKVDESKQM 117
E Y D A+R N + D DE +
Sbjct: 183 EEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQTEKDHNSEDEDEDK 242
Query: 118 DFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA-- 175
++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P +A
Sbjct: 243 YADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGK 302
Query: 176 DPNEKFYGGDNQNRLSGQALEFKQ 199
+P+E Y GDN R +G + Q
Sbjct: 303 NPDEVSYAGDNFVRYTGDTISMAQ 326
Score = 266 (98.7 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 50/112 (44%), Positives = 68/112 (60%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K + K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 356 SFKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVA 415
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASED 313
SKYEEDV INNHT +WGS+WK+ +WGYKCC K + ++ A+ +
Sbjct: 416 CSKYEEDVKINNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKEIANSE 467
Score = 83 (34.3 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 370 EVTAEEMEAYRMKKIHHDDPMKDFL 394
E T EEMEAYRMK+ DDPM FL
Sbjct: 560 EPTEEEMEAYRMKRQRPDDPMASFL 584
>UNIPROTKB|O95391 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006886 "intracellular protein
transport" evidence=IDA] [GO:0033554 "cellular response to stress"
evidence=IDA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=IDA]
[GO:0030628 "pre-mRNA 3'-splice site binding" evidence=IDA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0005737
GO:GO:0006886 EMBL:CH471062 GO:GO:0033554 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
EMBL:AC091842 GO:GO:0000380 GO:GO:0000389 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 CTD:10569 HOVERGEN:HBG053287 OrthoDB:EOG42RD76
GO:GO:0030628 GO:GO:0000386 EMBL:AF101074 EMBL:BC010634
EMBL:AY486334 EMBL:DQ174516 EMBL:DQ174517 IPI:IPI00294435
RefSeq:NP_006416.3 UniGene:Hs.435342 IntAct:O95391
MINT:MINT-1467161 STRING:O95391 PhosphoSite:O95391 PaxDb:O95391
PRIDE:O95391 DNASU:10569 Ensembl:ENST00000297151
Ensembl:ENST00000520664 GeneID:10569 KEGG:hsa:10569 UCSC:uc003lyg.3
GeneCards:GC05M159762 HGNC:HGNC:16939 HPA:HPA035907 MIM:605974
neXtProt:NX_O95391 PharmGKB:PA128394574 InParanoid:O95391
PhylomeDB:O95391 ChiTaRS:SLU7 GenomeRNAi:10569 NextBio:40113
PMAP-CutDB:O95391 ArrayExpress:O95391 Bgee:O95391 CleanEx:HS_SLU7
Genevestigator:O95391 Uniprot:O95391
Length = 586
Score = 380 (138.8 bits), Expect = 3.6e-67, Sum P(3) = 3.6e-67
Identities = 82/204 (40%), Positives = 107/204 (52%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGAMTH K C ERPR++GAK+T +IAPDE ++ DYDGKRDRWNG++P + ++
Sbjct: 123 CGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIV 182
Query: 60 ERYEARDEARRXXXXXXXXXXXXXXXXX--XNXXXXXXXXXXXXXALKVDEAKVDESKQM 117
E Y D A+R N ++ D DE +
Sbjct: 183 EEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDEDK 242
Query: 118 DFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA-- 175
++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P +A
Sbjct: 243 YADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGK 302
Query: 176 DPNEKFYGGDNQNRLSGQALEFKQ 199
+P+E Y GDN R +G + Q
Sbjct: 303 NPDEVSYAGDNFVRYTGDTISMAQ 326
Score = 257 (95.5 bits), Expect = 3.6e-67, Sum P(3) = 3.6e-67
Identities = 48/112 (42%), Positives = 67/112 (59%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K + K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 356 SFKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVA 415
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASED 313
SKYEEDV I+NHT +WGS+WK+ +WGYKCC K + ++ + +
Sbjct: 416 CSKYEEDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKEIVNSE 467
Score = 85 (35.0 bits), Expect = 3.6e-67, Sum P(3) = 3.6e-67
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 363 YNVRWND-EVTAEEMEAYRMKKIHHDDPMKDFL 394
YN + E T EEMEAYRMK+ DDPM FL
Sbjct: 552 YNSMYETREPTEEEMEAYRMKRQRPDDPMASFL 584
>UNIPROTKB|E2RRD5 [details] [associations]
symbol:SLU7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice site binding"
evidence=IEA] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IEA] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0005737 GO:GO:0006886 GO:GO:0033554
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 KO:K12819 OMA:PQTLMEM
InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:AAEX03003047 RefSeq:XP_536446.2 Ensembl:ENSCAFT00000027355
GeneID:479308 KEGG:cfa:479308 Uniprot:E2RRD5
Length = 633
Score = 380 (138.8 bits), Expect = 1.0e-66, Sum P(3) = 1.0e-66
Identities = 82/204 (40%), Positives = 107/204 (52%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGAMTH K C ERPR++GAK+T +IAPDE ++ DYDGKRDRWNG++P + ++
Sbjct: 170 CGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIV 229
Query: 60 ERYEARDEARRXXXXXXXXXXXXXXXXX--XNXXXXXXXXXXXXXALKVDEAKVDESKQM 117
E Y D A+R N ++ D DE +
Sbjct: 230 EEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDEDK 289
Query: 118 DFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA-- 175
++ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P +A
Sbjct: 290 YADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGK 349
Query: 176 DPNEKFYGGDNQNRLSGQALEFKQ 199
+P+E Y GDN R +G + Q
Sbjct: 350 NPDEVSYAGDNFVRYTGDTISMAQ 373
Score = 261 (96.9 bits), Expect = 1.0e-66, Sum P(3) = 1.0e-66
Identities = 49/112 (43%), Positives = 68/112 (60%)
Query: 202 NYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLP 261
++ V KE K + K+ I EKYG + P ELLL Q+E VEY R G +I+G E +
Sbjct: 403 SFKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVA 462
Query: 262 RSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASED 313
SKYEEDV I+NHT +WGS+WK+ +WGYKCC K + ++ A+ +
Sbjct: 463 CSKYEEDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKEIANSE 514
Score = 83 (34.3 bits), Expect = 1.0e-66, Sum P(3) = 1.0e-66
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 370 EVTAEEMEAYRMKKIHHDDPMKDFL 394
E T EEMEAYRMK+ DDPM FL
Sbjct: 607 EPTEEEMEAYRMKRQRPDDPMASFL 631
>FB|FBgn0039626 [details] [associations]
symbol:Slu7 "Slu7" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:AE014297 GO:GO:0007052 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0000389 eggNOG:NOG251791
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 GO:GO:0030628 EMBL:AY061470
RefSeq:NP_651659.2 UniGene:Dm.3588 IntAct:Q9VAQ7 MINT:MINT-806770
STRING:Q9VAQ7 PaxDb:Q9VAQ7 EnsemblMetazoa:FBtr0085418 GeneID:43427
KEGG:dme:Dmel_CG1420 UCSC:CG1420-RA FlyBase:FBgn0039626
InParanoid:Q9VAQ7 OrthoDB:EOG4JDFP0 PhylomeDB:Q9VAQ7
GenomeRNAi:43427 NextBio:833867 Bgee:Q9VAQ7 Uniprot:Q9VAQ7
Length = 574
Score = 288 (106.4 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 56/105 (53%), Positives = 69/105 (65%)
Query: 195 LEFKQLNNYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQ 254
LE Q Y KE+ KS K I EKYG + P+ LLL Q+E +EY R+G++I+
Sbjct: 321 LELLQ-KEYEQKKEQFKSSTKTHIVEKYGGEEHLQVPPKSLLLAQTEEYIEYSRSGKVIK 379
Query: 255 GVESFLPRSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNN 299
GVE RS YEEDVYINNHT+VWGS+W +WGYKCCK IKN+
Sbjct: 380 GVEKPKARSIYEEDVYINNHTTVWGSFWNAGRWGYKCCKSFIKNS 424
Score = 190 (71.9 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 105 KVDEAKVDESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKT 164
++ + + +E K +D +V+ VRNLRIREDTAKYL NLD NSAYYDPKT
Sbjct: 205 EISDEEGNEDKYVD--EVDMPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKT 262
Query: 165 RSMREDPLPDADPNEKFYGGDNQNRLSG 192
RSMR++P P E + G+N R SG
Sbjct: 263 RSMRDNPNPAVPEEEAEFAGENFVRFSG 290
Score = 187 (70.9 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEK-IESFELDYDGKRDRWNGFDPATYALVI 59
CGA+TH K C+ERPRK+ AK+ + DE + ++YD KRDRW+ +DPA + +I
Sbjct: 121 CGAVTHKRKDCLERPRKVQAKYAESIVVHDEHLVNEAAVNYDEKRDRWSSYDPANHREII 180
Query: 60 ERYEARDEARR 70
E YE +EA+R
Sbjct: 181 EEYEKVEEAKR 191
Score = 49 (22.3 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 363 YNVRWNDEV-TAEEMEAYRMKKIHHDDPMKDFL 394
YN ++ + T +E+E ++ K+ +DPM F+
Sbjct: 542 YNSMYDVKAPTEDEIEEWKKKRPRAEDPMLQFM 574
>DICTYBASE|DDB_G0281901 [details] [associations]
symbol:slu7 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
dictyBase:DDB_G0281901 GenomeReviews:CM000152_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000043 GO:GO:0000375 eggNOG:NOG251791 KO:K12819
OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 RefSeq:XP_640489.1
STRING:Q54TA0 EnsemblProtists:DDB0233423 GeneID:8623303
KEGG:ddi:DDB_G0281901 ProtClustDB:CLSZ2846778 Uniprot:Q54TA0
Length = 558
Score = 231 (86.4 bits), Expect = 2.9e-62, Sum P(4) = 2.9e-62
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 137 VRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNQNRLSGQALE 196
+RNLRIREDTAKYL NLDVNSA+Y+PK+RSMR++PLP+A+PN+ + GDN R SG+ E
Sbjct: 227 IRNLRIREDTAKYLYNLDVNSAFYEPKSRSMRDNPLPNANPNDIKFAGDNFARTSGETKE 286
Query: 197 FKQLNNY 203
F+ L +
Sbjct: 287 FRDLQRF 293
Score = 231 (86.4 bits), Expect = 2.9e-62, Sum P(4) = 2.9e-62
Identities = 43/95 (45%), Positives = 66/95 (69%)
Query: 207 KEKLKSRLKDIIAEKYG---NAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLPRS 263
KE+LK + ++ + KYG + +EEI + + QSE EY +G++I+G E + +S
Sbjct: 324 KEQLKQQTRNQLLTKYGGEEHLLKQEEIDK---VPQSEIYTEYSSSGKLIKGEEKIV-KS 379
Query: 264 KYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKN 298
KYEEDV++NNH S+WGS+W++ QWG+ CC+Q IKN
Sbjct: 380 KYEEDVFLNNHKSIWGSYWENGQWGFACCRQLIKN 414
Score = 229 (85.7 bits), Expect = 2.9e-62, Sum P(4) = 2.9e-62
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIESFELDYDGKRDRWNGFDPATYALVIE 60
CGAMTH K C ERPRK+GAK+TN I PDE I+ ELDYD KRD +NG+DP++Y V++
Sbjct: 99 CGAMTHKTKDCCERPRKLGAKFTNDDIKPDEVIQKLELDYDSKRDPYNGYDPSSYKEVMD 158
Query: 61 RYEARDEARR 70
YE D R+
Sbjct: 159 IYEKADTERK 168
Score = 68 (29.0 bits), Expect = 2.9e-62, Sum P(4) = 2.9e-62
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 364 NVRWN----DE--VTAEEMEAYRMKKIHHDDPMKDF 393
N+++N D+ V+ E+MEAY +K+ DDPM +F
Sbjct: 518 NIKYNSLSADDYNVSEEQMEAYNLKRKRSDDPMANF 553
Score = 41 (19.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 178 NEKFYGGDNQNRLSGQALEFKQLNNYNVIKEKLKSRLKDIIAEKYGNAASEE 229
N+ D N+ G+ + K+ +EKLK LKD E + +E
Sbjct: 468 NKSNEDNDKHNKKEGKRKDKKERKEK---EEKLKKALKDQDEENKKSVEKDE 516
>WB|WBGene00010629 [details] [associations]
symbol:K07C5.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0008380 GO:GO:0046872 GO:GO:0018996 GO:GO:0008270
GO:GO:0006397 GO:GO:0040011 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 EMBL:Z71181
eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715
Pfam:PF11708 GeneTree:ENSGT00390000002292 PIR:T23407
RefSeq:NP_505661.1 ProteinModelPortal:Q21278 STRING:Q21278
PaxDb:Q21278 EnsemblMetazoa:K07C5.6.1 EnsemblMetazoa:K07C5.6.2
GeneID:179443 KEGG:cel:CELE_K07C5.6 UCSC:K07C5.6.1 CTD:179443
WormBase:K07C5.6 InParanoid:Q21278 OMA:TESYIEY NextBio:905420
Uniprot:Q21278
Length = 647
Score = 238 (88.8 bits), Expect = 8.1e-53, Sum P(4) = 8.1e-53
Identities = 42/97 (43%), Positives = 63/97 (64%)
Query: 203 YNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLPR 262
Y K LK+ + + +KYG E ELLL Q+E +EY+R G++I+G E
Sbjct: 333 YEKEKSTLKNETQKELLDKYGGGEHMERPADELLLAQTESYIEYNRKGKVIKGKEKVAIS 392
Query: 263 SKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNN 299
S+++ED+Y NHTSV+GS+W++ +WGYKCC Q +KN+
Sbjct: 393 SRFKEDIYPQNHTSVFGSFWREGRWGYKCCHQFVKNS 429
Score = 200 (75.5 bits), Expect = 8.1e-53, Sum P(4) = 8.1e-53
Identities = 37/71 (52%), Positives = 50/71 (70%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGAM H + C +RPRK AK TN +IA D+ ++ + L +D KRDRWNG+DP+T+ VI
Sbjct: 118 CGAMGHQKRDCFDRPRKSNAKETNDNIAEDDYVQPNLTLGFDAKRDRWNGYDPSTHKQVI 177
Query: 60 ERYEARDEARR 70
E YE +EAR+
Sbjct: 178 EDYEHLEEARK 188
Score = 161 (61.7 bits), Expect = 8.1e-53, Sum P(4) = 8.1e-53
Identities = 36/60 (60%), Positives = 40/60 (66%)
Query: 137 VRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNE---KFYGGDNQNRLSGQ 193
VRNLRIREDTAKYL NL NS YYDPK+RSMRE+P E + GDN R SG+
Sbjct: 237 VRNLRIREDTAKYLYNLAENSPYYDPKSRSMRENPFAGVAGKELEAARFSGDNFVRYSGE 296
Score = 66 (28.3 bits), Expect = 8.1e-53, Sum P(4) = 8.1e-53
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 363 YNVRWNDEVTAE-EMEAYRMKKIHHDDPMKDFL 394
YN +++ E EMEAYR+ +H DPM ++
Sbjct: 605 YNTDYSNTAPNEKEMEAYRVTSVHSADPMAAYM 637
Score = 52 (23.4 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 289 YKCCKQTIKNNLMKANVARKAASEDMRAPAEEKNLA 324
Y+ K T+KN K + + E M PA+E LA
Sbjct: 333 YEKEKSTLKNETQKELLDKYGGGEHMERPADELLLA 368
>UNIPROTKB|Q51LA6 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:CM000230 EMBL:CM001237 eggNOG:NOG251791
KO:K12819 InterPro:IPR021715 Pfam:PF11708 OrthoDB:EOG49GPRB
RefSeq:XP_003720714.1 STRING:Q51LA6 EnsemblFungi:MGG_02985T0
GeneID:2682538 KEGG:mgr:MGG_02985 Uniprot:Q51LA6
Length = 474
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 112/402 (27%), Positives = 170/402 (42%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIESFELDYDGKRDRWNGFDPATYALVIE 60
CGAMTH K C+ RPR GAKWT I DE ++ + +D KRDRWNG+D Y V+E
Sbjct: 83 CGAMTHKVKDCLSRPRAKGAKWTGRDIKADELVQDVRMGWDAKRDRWNGYDAREYQAVVE 142
Query: 61 RYEARDEARRXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXA-----LKVDEAKVDESK 115
Y +E R+ + + L+ D AK +
Sbjct: 143 DYNKMEELRKEMQAKAAAESGKAIEDGDHYAETSDMSKHQPTSTRQLRLREDTAKYLLNL 202
Query: 116 QMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA 175
+D AK + + R + + + L ++A ++ R E
Sbjct: 203 DLDSAKYDPKTRTIVDAGATNDKTAELYAEQG--FLRQSGDAAEFEKAQRYAWEAQEKGG 260
Query: 176 DPNEKFYGGDNQNRLSGQALEFKQLNNYNVIKEKLKSRLKDIIAEKYGNAASE--EEIPR 233
D + N +G + K + +E+ + +L+ EKYG ++ + R
Sbjct: 261 DTSLHLQA----NPTAGSYMRKKLKEEEDAKREERERQLR----EKYGGEETKVLPDAIR 312
Query: 234 ELLLGQSERQVEYDRAGRIIQGVESFLPRSKYEEDVYINNHTSVWGSWWKDHQWGYKCCK 293
++ + +SER VEYD G +I+G + RSKY+ED++ NNHTSVWGSWW D +WGY CC
Sbjct: 313 QMAVTESERYVEYDEIG-LIKGGPKGVARSKYKEDIFHNNHTSVWGSWWSDFKWGYACCH 371
Query: 294 QTIKNNLMKANVARKAASEDMRAPAEEKNLATWGTDVP-DNLNLDQKQLAEALXXXXXXX 352
+KN+ KAA E L D D ++++ +EA
Sbjct: 372 SFVKNSYCTGEEG-KAAWEAAERQRTGSGLLEPAADAEVDGAREEERKASEAETAAAAKE 430
Query: 353 XXXXXXXXXXYNVRWNDEVTAEEMEAYRMKKIHHDDPMKDFL 394
+VT E++ YR K+ + DDPM L
Sbjct: 431 KAKKRTAEQMIG-----DVTEAELDEYRRKRTNTDDPMAQLL 467
>ZFIN|ZDB-GENE-041114-62 [details] [associations]
symbol:slu7 "SLU7 splicing factor homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR001878 SMART:SM00343
ZFIN:ZDB-GENE-041114-62 GO:GO:0008270 GO:GO:0003676
InterPro:IPR021715 Pfam:PF11708 GeneTree:ENSGT00390000002292
EMBL:AL929007 IPI:IPI00486196 Ensembl:ENSDART00000145241
ArrayExpress:F1RCR0 Bgee:F1RCR0 Uniprot:F1RCR0
Length = 619
Score = 373 (136.4 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 84/202 (41%), Positives = 106/202 (52%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIE-SFELDYDGKRDRWNGFDPATYALVI 59
CGA+TH K C+ERPRK+GAK++ IAPDE + +DYDGKRDRWNG+DP + ++
Sbjct: 164 CGALTHKKKDCLERPRKVGAKFSGTGIAPDEHQQVQLSMDYDGKRDRWNGYDPDEHMRIV 223
Query: 60 ERYEARDEARRXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXALKVDEAKVDESKQMDF 119
E Y D A+R + + DE DE K +D
Sbjct: 224 EEYSKVDLAKRTLKAQKLQEELASGKLMDQANSRKHEEAVQDHSSE-DE---DEDKYVD- 278
Query: 120 AKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDA--DP 177
+ + VRNLRIRED AKYL NLD NSAYYDPKTR+MRE+P + +P
Sbjct: 279 -DFDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYSNTGKNP 337
Query: 178 NEKFYGGDNQNRLSGQALEFKQ 199
E Y GDN R SG + Q
Sbjct: 338 EEVGYAGDNFVRYSGDTISMAQ 359
Score = 299 (110.3 bits), Expect = 7.3e-32, Sum P(2) = 7.3e-32
Identities = 69/189 (36%), Positives = 96/189 (50%)
Query: 156 NSAYYDPKTRSMREDPLPDADPNEKFYGGDNQNRLSGQALEFKQLNNYNVIKEKLKSRLK 215
N Y T SM + L + EK G + + LE +Y V K+ K + K
Sbjct: 346 NFVRYSGDTISMAQTQLFAWEAYEK--GSEVHLQADPTKLELLH-QSYKVKKDDFKEKQK 402
Query: 216 DIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQGVESFLPRSKYEEDVYINNHT 275
+ I EKYG + + PRELLL Q+E VEY R G +++G E + +SKYEEDV NNHT
Sbjct: 403 ETILEKYGGSEHLDAPPRELLLAQTEEYVEYSRHGAVLKGQEKAVAQSKYEEDVLNNNHT 462
Query: 276 SVWGSWWKDHQWGYKCCKQTIKNNLMKANVARKAASEDMRAPAEEKNLATWGTDVPDNL- 334
+WGS+WKD WGYKCC +K + +K S P EE ++ P L
Sbjct: 463 CIWGSYWKDGYWGYKCCHSMVKQSYCTGEAGKKVVSNSC-TPFEEDVEEAQTSEEPKTLL 521
Query: 335 NLDQKQLAE 343
+ Q++L +
Sbjct: 522 QMHQEKLKD 530
Score = 81 (33.6 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 370 EVTAEEMEAYRMKKIHHDDPMKDFL 394
E T EEMEA+RMK+ DDPM FL
Sbjct: 593 EPTEEEMEAFRMKRCRPDDPMASFL 617
>ASPGD|ASPL0000074217 [details] [associations]
symbol:AN4788 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:BN001303 EMBL:AACD01000081 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715 Pfam:PF11708
OMA:DSAKYDP EMBL:DQ157008 RefSeq:XP_662392.1 STRING:Q5B3U2
EnsemblFungi:CADANIAT00005634 GeneID:2872587 KEGG:ani:AN4788.2
OrthoDB:EOG49GPRB Uniprot:Q5B3U2
Length = 466
Score = 241 (89.9 bits), Expect = 5.6e-39, Sum P(2) = 5.6e-39
Identities = 62/208 (29%), Positives = 92/208 (44%)
Query: 188 NRLSGQALEFKQLNNYNVIKEKLKSRLKDIIAEKYGNAASEEEIPR-ELLLGQSERQVEY 246
N SG+ K+L E + + + EKYG + P E ++ ++ER VEY
Sbjct: 267 NPTSGEITRKKELAE----SEAKRDAHRKALLEKYGGEQHLKHTPLLETMVVENERFVEY 322
Query: 247 DRAGRIIQGVESFLPRSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKNNLMKANVA 306
D G I +G +SKY ED+ NNH SVWGSWW + QWGY CC T+KN+
Sbjct: 323 DETGAI-KGAPKKATKSKYPEDILTNNHKSVWGSWWHNFQWGYACCFSTVKNSYC----- 376
Query: 307 RKAASEDMRAPAEEKNLATWGTDVPDNLNLDQKQLAEALXXXXXXXXXXXXXXXXXYNVR 366
E RA E +N+ D + +L + + +
Sbjct: 377 --TGEEGKRAFEEARNMLLLPGDETEQPSLAVESASRQEEPSAESHNQQRDSKKRTL-ME 433
Query: 367 WNDEVTAEEMEAYRMKKIHHDDPMKDFL 394
+T EE+E+Y+ ++ DDPM F+
Sbjct: 434 VQSGITEEELESYKRSRLAADDPMAAFI 461
Score = 223 (83.6 bits), Expect = 5.6e-39, Sum P(2) = 5.6e-39
Identities = 39/70 (55%), Positives = 48/70 (68%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIESFELDYDGKRDRWNGFDPATYALVIE 60
CGAMTH AK C+ RPRK GAKWT I DE I++ +L +D KRDRWNG+D A Y V+E
Sbjct: 75 CGAMTHKAKECLSRPRKHGAKWTGKDIQADEVIQNVDLGWDAKRDRWNGYDAAEYRQVVE 134
Query: 61 RYEARDEARR 70
YE + +R
Sbjct: 135 EYEELERLKR 144
Score = 158 (60.7 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 52/141 (36%), Positives = 71/141 (50%)
Query: 138 RNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNQNRLSGQALEF 197
RNLRIREDTAKYLLNLD++SA YDPKTR M + + D +N R SG A EF
Sbjct: 186 RNLRIREDTAKYLLNLDLDSAKYDPKTRRMVDMGAAE-DQAAALVAEENFVRSSGDAAEF 244
Query: 198 KQLNNYNVIKEKLKSRLKDIIAEKYGNAASEEEIPRELLLGQSERQVEYDRAGRIIQ-GV 256
++ Y E + + I + N S E I R+ L +SE + + R + + G
Sbjct: 245 ERAQRY--AWEAQERGTQKIHLQ--ANPTSGE-ITRKKELAESEAKRDAHRKALLEKYGG 299
Query: 257 ESFLPRSKYEEDVYINNHTSV 277
E L + E + + N V
Sbjct: 300 EQHLKHTPLLETMVVENERFV 320
>GENEDB_PFALCIPARUM|PFF0500c [details] [associations]
symbol:PFF0500c "step II splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR001878 SMART:SM00343 GO:GO:0008380
GO:GO:0008270 GO:GO:0005681 GO:GO:0003676 EMBL:AL844505
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 RefSeq:XP_966091.1 ProteinModelPortal:C6KSU8
PRIDE:C6KSU8 EnsemblProtists:PFF0500c:mRNA GeneID:3885881
KEGG:pfa:PFF0500c EuPathDB:PlasmoDB:PF3D7_0610100
ProtClustDB:CLSZ2432798 Uniprot:C6KSU8
Length = 444
Score = 230 (86.0 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 66/219 (30%), Positives = 99/219 (45%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKI--ESFELDYDGKRDRWNGFDPATYALV 58
CG++ H K C+ER RK K N +E + +L YDG RDRW G++ + +
Sbjct: 94 CGSVAHKEKDCLERTRK---KKVNFMKNDNEDFICVTQDLGYDGNRDRWVGYNVNNFDYI 150
Query: 59 IERYE----------ARDEARRXXXXXXXXXXXXXXXXXXNXXXXXXXXX--XXXXALKV 106
+ YE A D ++ N + +
Sbjct: 151 YKEYEKIVEEKKKRKAEDLKKQYEKKSVKKKKTHDNNDDNNNGDNNNDDDEKSSSESENL 210
Query: 107 DEAKVDESK-QMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTR 165
DE+ +++K + D + RNLRIREDTAKYL NL +NSA+YDPK+R
Sbjct: 211 DESSNEDNKLKPDIMNNQNCTINKNEKNRNIARNLRIREDTAKYLYNLSLNSAFYDPKSR 270
Query: 166 SMREDPLPDA----DPNEKFYGGDNQNRLSGQALEFKQL 200
SMREDP + + ++ +Y G+N + A+E K+L
Sbjct: 271 SMREDPFANIRKHLNDDDNYYKGENYYNNTDDAIESKKL 309
Score = 155 (59.6 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 41/125 (32%), Positives = 69/125 (55%)
Query: 179 EKFYGGDNQNRLSGQALEFKQLNNYNVIKEK--LKSRLKDIIAEKYGNAASEEEIPRELL 236
E + G+N + + Q + + + + K+K +K + +DI+ + Y +EE+ P +
Sbjct: 315 ESYKRGENVH-FNAQPTQLELMYKEYLEKKKKIIKKKQEDIL-KTYKCQNNEEQQPNQEE 372
Query: 237 LGQSERQVEYDRAGRIIQG--VESFLPRSKYEEDVYINNHTSVWGSWWKDH--QWGYKCC 292
L QSE EY +I ++ SKYEED+Y+ +H+SV+GS++ H +WGYKCC
Sbjct: 373 LLQSEVYTEYKPIEQIHNNNMKKNIKVPSKYEEDIYLFDHSSVFGSYYDKHTKKWGYKCC 432
Query: 293 KQTIK 297
T K
Sbjct: 433 SSTNK 437
>UNIPROTKB|C6KSU8 [details] [associations]
symbol:PFF0500c "Step II splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001878 SMART:SM00343 GO:GO:0008380 GO:GO:0008270
GO:GO:0005681 GO:GO:0003676 EMBL:AL844505 HOGENOM:HOG000194391
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
RefSeq:XP_966091.1 ProteinModelPortal:C6KSU8 PRIDE:C6KSU8
EnsemblProtists:PFF0500c:mRNA GeneID:3885881 KEGG:pfa:PFF0500c
EuPathDB:PlasmoDB:PF3D7_0610100 ProtClustDB:CLSZ2432798
Uniprot:C6KSU8
Length = 444
Score = 230 (86.0 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 66/219 (30%), Positives = 99/219 (45%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKI--ESFELDYDGKRDRWNGFDPATYALV 58
CG++ H K C+ER RK K N +E + +L YDG RDRW G++ + +
Sbjct: 94 CGSVAHKEKDCLERTRK---KKVNFMKNDNEDFICVTQDLGYDGNRDRWVGYNVNNFDYI 150
Query: 59 IERYE----------ARDEARRXXXXXXXXXXXXXXXXXXNXXXXXXXXX--XXXXALKV 106
+ YE A D ++ N + +
Sbjct: 151 YKEYEKIVEEKKKRKAEDLKKQYEKKSVKKKKTHDNNDDNNNGDNNNDDDEKSSSESENL 210
Query: 107 DEAKVDESK-QMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAYYDPKTR 165
DE+ +++K + D + RNLRIREDTAKYL NL +NSA+YDPK+R
Sbjct: 211 DESSNEDNKLKPDIMNNQNCTINKNEKNRNIARNLRIREDTAKYLYNLSLNSAFYDPKSR 270
Query: 166 SMREDPLPDA----DPNEKFYGGDNQNRLSGQALEFKQL 200
SMREDP + + ++ +Y G+N + A+E K+L
Sbjct: 271 SMREDPFANIRKHLNDDDNYYKGENYYNNTDDAIESKKL 309
Score = 155 (59.6 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 41/125 (32%), Positives = 69/125 (55%)
Query: 179 EKFYGGDNQNRLSGQALEFKQLNNYNVIKEK--LKSRLKDIIAEKYGNAASEEEIPRELL 236
E + G+N + + Q + + + + K+K +K + +DI+ + Y +EE+ P +
Sbjct: 315 ESYKRGENVH-FNAQPTQLELMYKEYLEKKKKIIKKKQEDIL-KTYKCQNNEEQQPNQEE 372
Query: 237 LGQSERQVEYDRAGRIIQG--VESFLPRSKYEEDVYINNHTSVWGSWWKDH--QWGYKCC 292
L QSE EY +I ++ SKYEED+Y+ +H+SV+GS++ H +WGYKCC
Sbjct: 373 LLQSEVYTEYKPIEQIHNNNMKKNIKVPSKYEEDIYLFDHSSVFGSYYDKHTKKWGYKCC 432
Query: 293 KQTIK 297
T K
Sbjct: 433 SSTNK 437
>POMBASE|SPBC365.05c [details] [associations]
symbol:slu7 "splicing factor Slu7" species:4896
"Schizosaccharomyces pombe" [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISO] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
PomBase:SPBC365.05c GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676 GO:GO:0000350
eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715
Pfam:PF11708 OrthoDB:EOG49GPRB PIR:T40312 RefSeq:NP_596034.1
IntAct:Q9Y7Y2 EnsemblFungi:SPBC365.05c.1 GeneID:2540941
KEGG:spo:SPBC365.05c NextBio:20802056 Uniprot:Q9Y7Y2
Length = 379
Score = 220 (82.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 39/67 (58%), Positives = 45/67 (67%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEKIESFELDYDGKRDRWNGFDPATYALVIE 60
CGAM+H K CMERPRK GA+WT I DE I+ + +D KRDRWNG+D Y VIE
Sbjct: 116 CGAMSHKVKDCMERPRKRGARWTGEDIQADEVIQDINVSWDAKRDRWNGYDATDYKKVIE 175
Query: 61 RYEARDE 67
RYE DE
Sbjct: 176 RYEKLDE 182
Score = 74 (31.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 139 NLRIREDTAKYLLNLDVNSAYYDPKTRSMRED 170
+LR+RED YL D + Y+PK+RSMR++
Sbjct: 220 SLRMREDVVAYL-RADNKNLQYEPKSRSMRDE 250
>SGD|S000002495 [details] [associations]
symbol:SLU7 "RNA splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IEA;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000386 "second
spliceosomal transesterification activity" evidence=IDA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 SGD:S000002495
GO:GO:0046872 GO:GO:0008270 EMBL:BK006938 GO:GO:0005681
GO:GO:0003676 EMBL:Z46796 EMBL:X82086 Gene3D:4.10.60.10
GO:GO:0000350 KO:K12819 InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 OrthoDB:EOG49GPRB EMBL:X67810
EMBL:Z74384 EMBL:Z74385 EMBL:AY557701 PIR:A46229 RefSeq:NP_010373.3
RefSeq:NP_010377.3 ProteinModelPortal:Q02775 DIP:DIP-220N
IntAct:Q02775 MINT:MINT-394061 STRING:Q02775 PaxDb:Q02775
EnsemblFungi:YDR088C GeneID:851661 GeneID:851666 KEGG:sce:YDR088C
KEGG:sce:YDR092W CYGD:YDR088c eggNOG:NOG278054 HOGENOM:HOG000154339
KO:K10580 OMA:GYSGKEY NextBio:969269 Genevestigator:Q02775
GermOnline:YDR088C Uniprot:Q02775
Length = 382
Score = 102 (41.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 1 CGAMTHNAKSCMERPRKIGAKWTNMHIAPDEK---IESFELDYDGKRDRWNGFDPATYAL 57
CG H K CME+PRK+ +++ + + + + D+D ++DRW G+ Y
Sbjct: 125 CGEAGHKEKDCMEKPRKMQKLVPDLNSQKNNGTVLVRATDDDWDSRKDRWYGYSGKEYNE 184
Query: 58 VIERYEARDEARR 70
+I ++E RD+ +
Sbjct: 185 LISKWE-RDKRNK 196
Score = 98 (39.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 141 RIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNQNRLSGQALEFKQL 200
R+RED A YL +++ + YDPK+R + + L D K + + L+G+ L+ +L
Sbjct: 247 RLREDKAAYLNDINSTESNYDPKSRLYKTETLGAVDEKSKMF----RRHLTGEGLKLNEL 302
Query: 201 NNYNVIKEKLKSRLKDIIAEK 221
N + K + ++D I +K
Sbjct: 303 NQFARSHAK-EMGIRDEIEDK 322
>CGD|CAL0005702 [details] [associations]
symbol:SLU7 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000386 "second
spliceosomal transesterification activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] CGD:CAL0005702
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 EMBL:AACQ01000029
EMBL:AACQ01000028 eggNOG:NOG251791 KO:K12819 InterPro:IPR021715
Pfam:PF11708 RefSeq:XP_719802.1 RefSeq:XP_719919.1 GeneID:3638501
GeneID:3638614 KEGG:cal:CaO19.14119 KEGG:cal:CaO19.6827
Uniprot:Q5ADL4
Length = 350
Score = 103 (41.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 239 QSERQVEYDRAGRIIQGVESFLPRSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIKN 298
QS+++V ++ + E ++ + ED NH ++GS++++ +WGYKCCKQ KN
Sbjct: 285 QSKQEV-MEKYNASTESDEKESKKTGHLEDKLFLNHKYIYGSYYENGKWGYKCCKQFDKN 343
Query: 299 N 299
+
Sbjct: 344 S 344
Score = 63 (27.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 32 KIESFELDYDGKRDRWNGFDPATYALVIERYEARDEARR 70
++E E YD KRDRW G+ + ++ + + ++R+
Sbjct: 80 RVEENE-SYDSKRDRWYGYSTEEWLTHLKNWNDKKQSRK 117
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 395 338 0.00094 116 3 11 23 0.45 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 618 (66 KB)
Total size of DFA: 252 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.20u 0.14s 28.34t Elapsed: 00:00:01
Total cpu time: 28.21u 0.14s 28.35t Elapsed: 00:00:01
Start: Sat May 11 04:04:46 2013 End: Sat May 11 04:04:47 2013