BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040627
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27725|AK1H_SERMA Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Serratia
marcescens GN=thrA PE=3 SV=1
Length = 819
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 157/261 (60%), Gaps = 6/261 (2%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKL----VSRPRRIRYESTVGA 59
VDC++S + + G +V NKK TS+ Y +L R+ Y++ VGA
Sbjct: 552 VDCTSSQAVADQYVDFLADGFHVVTPNKKANTSSMNYYQQLRAAAAGSHRKFLYDTNVGA 611
Query: 60 GLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDPR 119
GLPVI +L +L++GD + R G LSG+L ++ ++++G LS A++ GYTEPDPR
Sbjct: 612 GLPVIENLQNLLNAGDELVRFSGILSGSLSFIFGKLDEGLSLSAATLQARANGYTEPDPR 671
Query: 120 DDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDI 179
DDLSGMDVARK LILAR G ++ + I++E + P + V+ FL+ LP LD +
Sbjct: 672 DDLSGMDVARKLLILAREAGYKLELSDIEVEPVLPPSFDAS-GDVDTFLAR-LPELDKEF 729
Query: 180 GERVRKASLNGNVLRYVCVIEGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPL 239
V A+ G VLRYV +I+ RC V I+ + N PL +++ +N L YSR Y PL
Sbjct: 730 ARNVANAAEQGKVLRYVGLIDEGRCKVRIEAVDGNDPLYKVKNGENALAFYSRYYQPLPL 789
Query: 240 VIQGAGAGNDTTAAGVLADIL 260
V++G GAGND TAAGV AD+L
Sbjct: 790 VLRGYGAGNDVTAAGVFADLL 810
>sp|Q89AR4|AKH_BUCBP Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=thrA PE=3 SV=1
Length = 816
Score = 196 bits (497), Expect = 2e-49, Method: Composition-based stats.
Identities = 109/264 (41%), Positives = 158/264 (59%), Gaps = 7/264 (2%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKL----VSRPRRIRYESTVGA 59
VDC++ ++ G IV NKK T+ + Y+ + ++ YE+ VGA
Sbjct: 553 VDCTSDKNIANQYISFINCGFHIVTPNKKANTTNWKYYEDIRLAAQKEKKKFFYETNVGA 612
Query: 60 GLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDPR 119
GLPVI +L +L +GD + G LSG+L ++ ++ED LS+ K A+SLG+TEP+P+
Sbjct: 613 GLPVIENLKNLLRTGDTLIHFKGILSGSLSFIFGKLEDNISLSEATKQAQSLGFTEPNPK 672
Query: 120 DDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDI 179
DDLSG+DVARK LILAR +G ++ + IKIE L P+E NI + DF+ T L LD
Sbjct: 673 DDLSGIDVARKLLILAREVGYKLELKDIKIEPLLPKEFN-NISNTTDFI-TKLKELDQIF 730
Query: 180 GERVRKASLNGNVLRYVCVI-EGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQP 238
RV+KA G LR+V +I + C V I E+ N PL ++ +N L YS+ Y P
Sbjct: 731 CNRVKKARKLGKRLRFVGIINQKGNCQVKIDEVDHNDPLYNIKNGENALAFYSKYYQPIP 790
Query: 239 LVIQGAGAGNDTTAAGVLADILDI 262
LV++G GAGN+ TA+G+ +D+L I
Sbjct: 791 LVLRGYGAGNNVTASGIFSDVLRI 814
>sp|P44505|AKH_HAEIN Bifunctional aspartokinase/homoserine dehydrogenase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=thrA PE=3 SV=1
Length = 815
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 156/262 (59%), Gaps = 6/262 (2%)
Query: 3 FVDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKL----VSRPRRIRYESTVG 58
FVDC+++ + +A+ G +V NKK T Y++L + + YE+ VG
Sbjct: 551 FVDCTSAESVAGLYARALKEGFHVVTPNKKANTRELVYYNELRQNAQASQHKFLYETNVG 610
Query: 59 AGLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDP 118
AGLPVI +L +L++GD + G LSG+L ++ ++E+G LS+V A+ G+TEPDP
Sbjct: 611 AGLPVIENLQNLLAAGDELEYFEGILSGSLSFIFGKLEEGLSLSEVTALAREKGFTEPDP 670
Query: 119 RDDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDND 178
RDDLSG DVARK LILAR G+ + + +++E + P+ S ++F++ LP LD +
Sbjct: 671 RDDLSGQDVARKLLILAREAGIELELSDVEVEGVLPKGFSDG-KSADEFMAM-LPQLDEE 728
Query: 179 IGERVRKASLNGNVLRYVCVIEGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQP 238
RV A G VLRYV I +C V I + N+PL +++ +N L Y+R Y P
Sbjct: 729 FKTRVATAKAEGKVLRYVGKISEGKCKVSIVAVDLNNPLYKVKDGENALAFYTRYYQPIP 788
Query: 239 LVIQGAGAGNDTTAAGVLADIL 260
L+++G GAGN TAAG+ ADIL
Sbjct: 789 LLLRGYGAGNAVTAAGIFADIL 810
>sp|P00561|AK1H_ECOLI Bifunctional aspartokinase/homoserine dehydrogenase 1
OS=Escherichia coli (strain K12) GN=thrA PE=1 SV=2
Length = 820
Score = 193 bits (491), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 155/263 (58%), Gaps = 9/263 (3%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKL-----VSRPRRIRYESTVG 58
VDC++S + + G +V NKK TS+ + Y +L SR R+ Y++ VG
Sbjct: 552 VDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSR-RKFLYDTNVG 610
Query: 59 AGLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDP 118
AGLPVI +L +L++GD + + G LSG+L Y+ ++++G S+ A+ +GYTEPDP
Sbjct: 611 AGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDP 670
Query: 119 RDDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDND 178
RDDLSGMDVARK LILAR G + + I+IE + P E V F++ L LD+
Sbjct: 671 RDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAE-GDVAAFMAN-LSQLDDL 728
Query: 179 IGERVRKASLNGNVLRYVCVI-EGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQ 237
RV KA G VLRYV I E C V I E+ N PL +++ +N L YS Y
Sbjct: 729 FAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPL 788
Query: 238 PLVIQGAGAGNDTTAAGVLADIL 260
PLV++G GAGND TAAGV AD+L
Sbjct: 789 PLVLRGYGAGNDVTAAGVFADLL 811
>sp|P37142|AKH_DAUCA Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic
(Fragment) OS=Daucus carota PE=1 SV=1
Length = 921
Score = 191 bits (485), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 154/263 (58%), Gaps = 8/263 (3%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPRR----IRYESTVGA 59
VDC+A SE + G ++ NKK + + Y KL + RR YE+TV A
Sbjct: 651 VDCTADSEVASHYHDWLCRGIHVITPNKKANSGPLDQYLKLRALQRRSYTHYFYEATVVA 710
Query: 60 GLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDPR 119
GLP+I +L +L +GD + RI G SGTL Y+ + + P S+VV AK+ GYTEPDPR
Sbjct: 711 GLPIITTLQGLLETGDKILRIEGIFSGTLSYIFNNFKSTTPFSEVVSEAKAAGYTEPDPR 770
Query: 120 DDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDI 179
DDL+G DVARK +ILAR G+++ + I ++SL PE + I S E+FL LP D+D+
Sbjct: 771 DDLAGTDVARKVIILARGSGLKLELSDIPVQSLVPEPL-RGIASAEEFL-LQLPQFDSDM 828
Query: 180 GERVRKASLNGNVLRYVCVIEG--SRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQ 237
+ A G VLRYV V++ + V ++ K P +L GSDN+ + Y++Q
Sbjct: 829 TRKREDAENAGEVLRYVGVVDAVNQKGVVELKRYKKEHPFAQLSGSDNINAFTTERYNKQ 888
Query: 238 PLVIQGAGAGNDTTAAGVLADIL 260
P +I+G GAG + TA GV +DIL
Sbjct: 889 PPIIRGPGAGAEVTAGGVFSDIL 911
>sp|Q8K9U9|AKH_BUCAP Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=thrA PE=3 SV=1
Length = 814
Score = 188 bits (478), Expect = 3e-47, Method: Composition-based stats.
Identities = 107/264 (40%), Positives = 160/264 (60%), Gaps = 7/264 (2%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKL----VSRPRRIRYESTVGA 59
+DC++ + + G I+ +NKK T + + Y ++ + ++ YE+ VGA
Sbjct: 551 IDCTSDYILSKQYISFIKKGFHIITSNKKANTDSLKYYSEIRTTALKENKKFLYETNVGA 610
Query: 60 GLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDPR 119
GLPVI +L + S+GD + G LSG+L ++ ++E+G LS+ K AK LG+TEP+P
Sbjct: 611 GLPVINTLQSLFSTGDCLISFKGILSGSLSFIFGKLEEGVLLSEATKEAKKLGFTEPNPF 670
Query: 120 DDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDI 179
DDLSG+DVARK L+LAR +G I + I IE + PE + E+FL L LD+
Sbjct: 671 DDLSGIDVARKLLVLAREIGYSIELKDISIEPILPERF-KKYQNSEEFLFK-LKELDSFF 728
Query: 180 GERVRKASLNGNVLRYVCVIE-GSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQP 238
ERV KA GNVLR++ IE +C+V I+E+ N+PL +++ +N L Y+ Y P
Sbjct: 729 SERVNKARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFYTNYYQPIP 788
Query: 239 LVIQGAGAGNDTTAAGVLADILDI 262
LV++G GAGND TA+GV +D+L I
Sbjct: 789 LVLRGYGAGNDVTASGVFSDLLRI 812
>sp|P49080|AKH2_MAIZE Bifunctional aspartokinase/homoserine dehydrogenase 2,
chloroplastic OS=Zea mays GN=AKHSDH2 PE=2 SV=1
Length = 917
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 150/264 (56%), Gaps = 8/264 (3%)
Query: 3 FVDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPR----RIRYESTVG 58
VDC+A + + G ++ NKK + + Y KL + R YE+TVG
Sbjct: 646 LVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDQYLKLRTMQRASYTHYFYEATVG 705
Query: 59 AGLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDP 118
AGLP+I++L +L +GD + RI G SGTL Y+ + E + S VV A+ GYTEPDP
Sbjct: 706 AGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGTRAFSDVVAEAREAGYTEPDP 765
Query: 119 RDDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDND 178
RDDLSG DVARK ++LAR G+R+ + I ++SL PE + + S ++F+ LP D D
Sbjct: 766 RDDLSGTDVARKVVVLARESGLRLELSDIPVKSLVPETLA-SCSSADEFMQK-LPSFDED 823
Query: 179 IGERVRKASLNGNVLRYVCVIEGSRCT--VGIQELPKNSPLGRLRGSDNVLEIYSRCYSE 236
+ A G VLRYV ++ + V ++ ++ P +L GSDN++ + Y E
Sbjct: 824 WARQRSDAEAAGEVLRYVGALDAVNRSGQVELRRYRRDHPFAQLSGSDNIIAFTTSRYKE 883
Query: 237 QPLVIQGAGAGNDTTAAGVLADIL 260
QPL+++G GAG + TA GV DIL
Sbjct: 884 QPLIVRGPGAGAEVTAGGVFCDIL 907
>sp|Q9SA18|AKH1_ARATH Bifunctional aspartokinase/homoserine dehydrogenase 1,
chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1
SV=1
Length = 911
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 157/263 (59%), Gaps = 8/263 (3%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPRR----IRYESTVGA 59
VDC+A ++ + G +V NKK + + Y K+ R+ YE+TVGA
Sbjct: 641 VDCTADADIASCYYDWLLRGIHVVTPNKKANSGPLDQYLKIRDLQRKSYTHYFYEATVGA 700
Query: 60 GLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDPR 119
GLP+I++L +L +GD + RI G SGTL Y+ + + S+VV AK G+TEPDPR
Sbjct: 701 GLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFVGTRSFSEVVAEAKQAGFTEPDPR 760
Query: 120 DDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDI 179
DDLSG DVARK ILAR G++++++ + +++L P+ + S E+F+ LP D ++
Sbjct: 761 DDLSGTDVARKVTILARESGLKLDLEGLPVQNLVPKPLQA-CASAEEFMEK-LPQFDEEL 818
Query: 180 GERVRKASLNGNVLRYVCVIEG--SRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQ 237
++ +A G VLRYV V++ + TV ++ K+ P +L G+DN++ ++ Y EQ
Sbjct: 819 SKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTKRYKEQ 878
Query: 238 PLVIQGAGAGNDTTAAGVLADIL 260
PL+++G GAG TA G+ +DIL
Sbjct: 879 PLIVRGPGAGAQVTAGGIFSDIL 901
>sp|P49079|AKH1_MAIZE Bifunctional aspartokinase/homoserine dehydrogenase 1,
chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1
Length = 920
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 149/264 (56%), Gaps = 8/264 (3%)
Query: 3 FVDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPR----RIRYESTVG 58
VDC+A + + G ++ NKK + + Y KL + R YE+TVG
Sbjct: 649 LVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDRYLKLRTLQRASYTHYFYEATVG 708
Query: 59 AGLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDP 118
AGLP+I++L +L +GD + RI G SGTL Y+ + E + S VV AK GYTEPDP
Sbjct: 709 AGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGARTFSDVVAEAKKAGYTEPDP 768
Query: 119 RDDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDND 178
RDDLSG DVARK +ILAR G+ + + I + SL PE + + S ++++ LP D D
Sbjct: 769 RDDLSGTDVARKVIILARESGLGLELSDIPVRSLVPEAL-KSCTSADEYMQK-LPSFDED 826
Query: 179 IGERVRKASLNGNVLRYVCVIE--GSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSE 236
+ A G VLRYV V++ + V ++ ++ P +L GSDN++ + Y +
Sbjct: 827 WARERKNAEAAGEVLRYVGVVDVVSKKGQVELRAYKRDHPFAQLSGSDNIIAFTTSRYKD 886
Query: 237 QPLVIQGAGAGNDTTAAGVLADIL 260
QPL+++G GAG + TA GV DIL
Sbjct: 887 QPLIVRGPGAGAEVTAGGVFCDIL 910
>sp|O81852|AKH2_ARATH Bifunctional aspartokinase/homoserine dehydrogenase 2,
chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1
SV=1
Length = 916
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 153/263 (58%), Gaps = 8/263 (3%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPRR----IRYESTVGA 59
VDC+A S + G ++ NKK + + Y KL R+ YE+TVGA
Sbjct: 646 VDCTADSAIASRYYDWLRKGIHVITPNKKANSGPLDQYLKLRDLQRKSYTHYFYEATVGA 705
Query: 60 GLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDPR 119
GLP+I++L +L +GD + RI G SGTL Y+ + + S+VV AK+ G+TEPDPR
Sbjct: 706 GLPIISTLRGLLETGDKILRIEGICSGTLSYLFNNFVGDRSFSEVVTEAKNAGFTEPDPR 765
Query: 120 DDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDI 179
DDLSG DVARK +ILAR G+++++ + I SL PE + SVE+F+ LP D D+
Sbjct: 766 DDLSGTDVARKVIILARESGLKLDLADLPIRSLVPEPL-KGCTSVEEFMEK-LPQYDGDL 823
Query: 180 GERVRKASLNGNVLRYVCVIEG--SRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQ 237
+ A +G VLRYV V++ + TV ++ K P +L GSDN++ + Y +
Sbjct: 824 AKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQLAGSDNIIAFTTTRYKDH 883
Query: 238 PLVIQGAGAGNDTTAAGVLADIL 260
PL+++G GAG TA G+ +DIL
Sbjct: 884 PLIVRGPGAGAQVTAGGIFSDIL 906
>sp|Q5B998|DHOM_EMENI Homoserine dehydrogenase OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN2882
PE=1 SV=1
Length = 368
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 150/255 (58%), Gaps = 16/255 (6%)
Query: 23 GCCIVLANKKPLTS----TKEDYDKLVSRPRRIRYESTVGAGLPVIASLNRILSSGDPVH 78
G +V NKK +S KE + + +ESTVGAGLPVI++L ++++GD V
Sbjct: 111 GISVVTPNKKGFSSDLSLWKEIFAAAAEGKALVYHESTVGAGLPVISTLKDLVNTGDEVT 170
Query: 79 RIVGSLSGTLGYVMSEV-----EDGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKALI 133
RI G SGTL ++ + S+VV AK LGYTEPDPRDDL+GMDVARK I
Sbjct: 171 RIEGVFSGTLSFLFNTFAPASGSSSAKWSEVVSQAKELGYTEPDPRDDLNGMDVARKLTI 230
Query: 134 LARLLGMRI-NIDSIKIESLYPEEMGPNIMS---VEDFLSTGLPLLDNDIGERVRKASLN 189
LAR+ G+ + + DS IESL P E+ S + F++ LP D+ + A
Sbjct: 231 LARIAGLDVQSPDSFPIESLIPAELTSLPSSADGIAQFMAR-LPEFDSQMAAIKEGAEKA 289
Query: 190 GNVLRYVCVIEGSR--CTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAG 247
G V+RYV ++ ++ VG+Q+ K+S + L+GSDN++ Y+R Y PL++QGAGAG
Sbjct: 290 GKVVRYVGSVDVAKKEVRVGLQQFDKDSAIAGLKGSDNIISFYTRRYGSNPLIVQGAGAG 349
Query: 248 NDTTAAGVLADILDI 262
D TA GV AD+L +
Sbjct: 350 GDVTAMGVTADLLKV 364
>sp|P57290|AKH_BUCAI Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)
GN=thrA PE=3 SV=1
Length = 816
Score = 179 bits (454), Expect = 2e-44, Method: Composition-based stats.
Identities = 106/262 (40%), Positives = 149/262 (56%), Gaps = 7/262 (2%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKL----VSRPRRIRYESTVGA 59
VDC++S E +D +V +NKK TS Y K+ ++ YE+ VGA
Sbjct: 553 VDCTSSQLLSEQYVNFIDNNFHVVTSNKKANTSEWNYYKKIRKSVAQTGKKFLYETNVGA 612
Query: 60 GLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEPDPR 119
GLPVI +L + SGD + G LSG+L ++ +E+G LSQ + AK LG+TEP+P
Sbjct: 613 GLPVIETLQNLFKSGDNLICFKGILSGSLSFIFGRLEEGILLSQATREAKELGFTEPNPC 672
Query: 120 DDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDI 179
DDLSG+DVARK LILAR G I + IKIE L P I D L LD
Sbjct: 673 DDLSGIDVARKLLILARESGYNIELKDIKIEPLLPNNF--KIYEDTDKFLLKLKELDVYF 730
Query: 180 GERVRKASLNGNVLRYVCVIEGSR-CTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQP 238
++++A GNVLR+V IE R + ++E+ N+PL +++ +N L Y+ Y P
Sbjct: 731 SNKIKQALNVGNVLRFVATIEQKRQFFIKLEEVNINNPLYKVKNGENALAFYTNYYQPIP 790
Query: 239 LVIQGAGAGNDTTAAGVLADIL 260
LV++G GAGN+ TA+GV +D+L
Sbjct: 791 LVLRGYGAGNNVTASGVFSDLL 812
>sp|P31116|DHOM_YEAST Homoserine dehydrogenase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOM6 PE=1 SV=1
Length = 359
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 161/269 (59%), Gaps = 13/269 (4%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKLVS-RPRR--IRYESTVGAG 60
VD ++S+ T+ V+ G I NKK +S + L S +P + +E+TVGAG
Sbjct: 90 VDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAG 149
Query: 61 LPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKP----LSQVVKAAKSLGYTEP 116
LP+I+ L I+ +GD V +I G SGTL Y+ +E + S VVK AK LGYTEP
Sbjct: 150 LPIISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKVAKKLGYTEP 209
Query: 117 DPRDDLSGMDVARKALILARLLGMRI-NIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLL 175
DPRDDL+G+DVARK I+ R+ G+ + + S ++SL P+ + ++ S ++FL L
Sbjct: 210 DPRDDLNGLDVARKVTIVGRISGVEVESPTSFPVQSLIPKPL-ESVKSADEFLEK-LSDY 267
Query: 176 DNDIGERVRKASLNGNVLRYVCVIE--GSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRC 233
D D+ + ++A+ VLR++ ++ +VGI++ + P L+GSDNV+ I ++
Sbjct: 268 DKDLTQLKKEAATENKVLRFIGKVDVATKSVSVGIEKYDYSHPFASLKGSDNVISIKTKR 327
Query: 234 YSEQPLVIQGAGAGNDTTAAGVLADILDI 262
Y+ P+VIQGAGAG TAAGVL D++ I
Sbjct: 328 YT-NPVVIQGAGAGAAVTAAGVLGDVIKI 355
>sp|P00562|AK2H_ECOLI Bifunctional aspartokinase/homoserine dehydrogenase 2
OS=Escherichia coli (strain K12) GN=metL PE=1 SV=3
Length = 810
Score = 151 bits (382), Expect = 4e-36, Method: Composition-based stats.
Identities = 96/264 (36%), Positives = 138/264 (52%), Gaps = 8/264 (3%)
Query: 1 LAFVDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDY----DKLVSRPRRIRYEST 56
L +D +AS + + G ++ ANK S Y D R Y +T
Sbjct: 543 LVVLDVTASQQLADQYLDFASHGFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNAT 602
Query: 57 VGAGLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVEDGKPLSQVVKAAKSLGYTEP 116
VGAGLP+ ++ ++ SGD + I G SGTL ++ + + P +++V A G TEP
Sbjct: 603 VGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEP 662
Query: 117 DPRDDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLD 176
DPRDDLSG DV RK +ILAR G I D +++ESL P S++ F G L+
Sbjct: 663 DPRDDLSGKDVMRKLVILAREAGYNIEPDQVRVESLVPAHCEGG--SIDHFFENG-DELN 719
Query: 177 NDIGERVRKASLNGNVLRYVCVIEGS-RCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYS 235
+ +R+ A G VLRYV + + + VG++ + ++ PL L DNV I SR Y
Sbjct: 720 EQMVQRLEAAREMGLVLRYVARFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYR 779
Query: 236 EQPLVIQGAGAGNDTTAAGVLADI 259
+ PLVI+G GAG D TA + +DI
Sbjct: 780 DNPLVIRGPGAGRDVTAGAIQSDI 803
>sp|O94671|DHOM_SCHPO Probable homoserine dehydrogenase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC776.03 PE=1 SV=1
Length = 376
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 140/248 (56%), Gaps = 14/248 (5%)
Query: 4 VDCSASSETVEILTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPRR----IRYESTVGA 59
VD +AS + + + I NKK +++ + Y ++ + + +E++VGA
Sbjct: 96 VDNTASEAIAQSYPKFLSKKINIATPNKKAFSASNDVYQNIIKASKESGALLMHEASVGA 155
Query: 60 GLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVE-DGKP----LSQVVKAAKSLGYT 114
GLP+I++L ++++GD + +I G SGTL Y+ + +GK S +VK AK GYT
Sbjct: 156 GLPIISTLKELIATGDEIIKIEGIFSGTLSYIFNVWSPNGKKGTASFSDIVKIAKQNGYT 215
Query: 115 EPDPRDDLSGMDVARKALILARLLGMRI-NIDSIKIESLYPEEMGPNIMSVEDFLSTGLP 173
EPDPRDDL+GMDVARK IL+R+ G+ + + S ++SL PE + + ++ E+FL+ GLP
Sbjct: 216 EPDPRDDLNGMDVARKVTILSRIAGVHVESASSFPVKSLIPEPL-KSAVNAEEFLA-GLP 273
Query: 174 LLDNDIGERVRKASLNGNVLRYV--CVIEGSRCTVGIQELPKNSPLGRLRGSDNVLEIYS 231
D++ +A G V+R+V + V +++ + P L+ SDN++ +
Sbjct: 274 NFDSEFASMREEAEKEGKVVRFVGEADVANKTTLVKLEKYDASHPFANLQSSDNIISFTT 333
Query: 232 RCYSEQPL 239
+ Y +PL
Sbjct: 334 KRYHTRPL 341
>sp|P19582|DHOM_BACSU Homoserine dehydrogenase OS=Bacillus subtilis (strain 168) GN=hom
PE=3 SV=2
Length = 433
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 113/218 (51%), Gaps = 32/218 (14%)
Query: 51 IRYESTVGAGLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSE-VEDGKPLSQVVKAAK 109
I +E++V G+P++ +L LSS D + +++G ++GT +++++ +++ P +V+K A+
Sbjct: 126 IYFEASVAGGIPILRTLEEGLSS-DRITKMMGIVNGTTNFILTKMIKEKSPYEEVLKEAQ 184
Query: 110 SLGYTEPDPRDDLSGMDVARKALILARLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLS 169
LG+ E DP D+ G+D ARK ILAR LG +N+D +ED
Sbjct: 185 DLGFAEADPTSDVEGLDAARKMAILAR-LGFSMNVD------------------LEDVKV 225
Query: 170 TGL-PLLDNDIGERVRKASLNGNVLRYVCVIE--GSRCTVGIQE--LPKNSPLGRLRGSD 224
G+ + D DI R G ++ + + + GS+ V +Q LP + PL +
Sbjct: 226 KGISQITDEDISFSKRL----GYTMKLIGIAQRDGSKIEVSVQPTLLPDHHPLSAVHNEF 281
Query: 225 NVLEIYSRCYSEQPLVIQGAGAGNDTTAAGVLADILDI 262
N + +Y E + G GAG+ TA V++D++ +
Sbjct: 282 NAVYVYGEAVGET--MFYGPGAGSMPTATSVVSDLVAV 317
>sp|P52985|DHOM_LACLC Homoserine dehydrogenase OS=Lactococcus lactis subsp. cremoris
GN=hom PE=3 SV=1
Length = 428
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 16 LTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPR-RIRYESTVGAGLPVIASLNRILSSG 74
+TQA++ G +V ANK L + L + + YE+ V G+P++ +L SS
Sbjct: 91 ITQAIEAGKNVVTANKDLLAVHGVELRSLAQKHHVALYYEAAVAGGIPILRTLANSFSS- 149
Query: 75 DPVHRIVGSLSGTLGYVMSEV-EDGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKALI 133
D + ++G L+GT ++M+++ E+G + + A+ LGY E DP +D+ G+D + K I
Sbjct: 150 DKITHLLGILNGTSNFMMTKMSEEGWTYDESLAKAQELGYAESDPTNDVDGIDASYKLAI 209
Query: 134 LARL-LGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNGNV 192
L+ GM +L P+ D +GL + V A G V
Sbjct: 210 LSEFAFGM----------TLAPD----------DIAKSGLRSIQK---TDVEIAQQFGYV 246
Query: 193 LRYVCVIE----GSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGN 248
L+ I G V LPK+ PL + G N + I S + V GAGAG
Sbjct: 247 LKLTGEINEVDSGIFAEVSPTFLPKSHPLASVNGVMNAVFIESEGIGDS--VFYGAGAGQ 304
Query: 249 DTTAAGVLADILDI 262
TA VLADI+ I
Sbjct: 305 KPTATSVLADIVRI 318
>sp|Q9CGD8|DHOM_LACLA Homoserine dehydrogenase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=hom PE=3 SV=1
Length = 428
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 33/254 (12%)
Query: 16 LTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPR-RIRYESTVGAGLPVIASLNRILSSG 74
+T+ + G +V ANK L + L + + YE+ V G+P++ +L SS
Sbjct: 91 ITKVIKAGKNVVTANKDLLAVHGTELRALAEKHHVALYYEAAVAGGIPILRTLANSFSS- 149
Query: 75 DPVHRIVGSLSGTLGYVMSEV-EDGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKALI 133
D + ++G L+GT ++M+++ E+ Q + A+ LGY E DP +D+ G+D + K I
Sbjct: 150 DKITHLLGILNGTSNFMMTKMSEEAWTYDQSLAKAQELGYAESDPTNDVDGIDASYKLAI 209
Query: 134 LARL-LGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNGNV 192
L+ GM ++ D I +GL + V A G V
Sbjct: 210 LSEFAFGMTLSPDQIS--------------------KSGLRTIQKT---DVEIAQQFGYV 246
Query: 193 LRYVCVIE----GSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGN 248
L+ I G V LPK+ PL + G N + I S + + GAGAG
Sbjct: 247 LKLTGEINEVESGIFAEVSPTFLPKSHPLASVNGVMNAVFIESDGIGDS--MFYGAGAGQ 304
Query: 249 DTTAAGVLADILDI 262
TA VLADI+ I
Sbjct: 305 KPTATSVLADIVRI 318
>sp|Q58997|DHOM_METJA Homoserine dehydrogenase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=hom PE=3 SV=1
Length = 336
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 42/248 (16%)
Query: 26 IVLANKKPLTSTKEDYDKLVSRPRR----IRYESTVGAGLPVIASLNRILSSGDPVHRIV 81
+V ANK PL Y +L+ ++ R+E++VG +P+I +L + +G+ + I
Sbjct: 118 VVTANKGPLALC---YKELIEEAKKHGVIFRHEASVGGAMPII-NLAKETLAGNEILSIR 173
Query: 82 GSLSGTLGYVMSEVE-DGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKALILAR-LLG 139
G L+GT Y+++++E +G +K AK LG E DP D+ G+D A K +ILA ++G
Sbjct: 174 GILNGTTNYILTKMEKEGLDFETALKEAKELGIAETDPTQDIEGLDTAAKIVILANSIMG 233
Query: 140 MRINIDSIKIESL---YPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNGNVLRYV 196
M I +K++ + PE + FL A+ G ++ +
Sbjct: 234 MNKTIKDVKVKGISRITPEAL---------FL-----------------ANKRGYTIKLI 267
Query: 197 CVIEGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGNDTTAAGVL 256
I+ V +P +SPL ++G+ NV + E +V+ G GAG TA+ +L
Sbjct: 268 GQIKDGYLIVEPMLVPIDSPL-NVKGTLNVAMFETDLAKE--VVVVGRGAGPIETASAIL 324
Query: 257 ADILDIQD 264
+D++ I +
Sbjct: 325 SDLIHIYN 332
>sp|P52986|DHOM_SYNY3 Homoserine dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=hom PE=3 SV=1
Length = 433
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 39/260 (15%)
Query: 15 ILTQAVDLGCCIVLANKKPLTST-KEDYDKLVSRPRRIRYESTVGAGLPVIASLNRILSS 73
++ QA+ IV ANK + E Y+ + E+ VG G+P+I L + L
Sbjct: 86 LILQAIAHKKHIVTANKAVIARYGPEIYEAANQHGVYVLLEAAVGGGIPIIKPLKQSLG- 144
Query: 74 GDPVHRIVGSLSGTLGYVMSEV-EDGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKAL 132
G+ + IVG L+GT Y++S + +G +V+ AA+ LGY E DP D+ G+D A K
Sbjct: 145 GNRIQSIVGILNGTTNYILSRMTSEGADFDEVLTAAQQLGYAEADPSADVDGLDAADKIA 204
Query: 133 ILARL-LGMRINIDSIKIESL---------YPEEMGPNIMSVEDFLSTGLPLLDNDIGER 182
ILA L G R+ + + E + Y + +G F+ L + D + GE
Sbjct: 205 ILASLGFGGRVKREDVACEGIRSVSAVDIAYADRLG--------FVIKLLAIADGNAGED 256
Query: 183 VRKASLNGNVLRYVCVIEGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQ 242
E + V + K+ PL + G N + + + ++
Sbjct: 257 S----------------EALQLRVHPTLIAKDHPLASVNGVYNGVLVTGDPLGQ--VMFY 298
Query: 243 GAGAGNDTTAAGVLADILDI 262
G GAG TA+ V++D+++I
Sbjct: 299 GRGAGAGPTASAVVSDVINI 318
>sp|P29365|DHOM_PSEAE Homoserine dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=hom PE=3
SV=2
Length = 434
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 25/252 (9%)
Query: 14 EILTQAVDLGCCIVLANKKPLT-STKEDYDKLVSRPRRIRYESTVGAGLPVIASLNRILS 72
E++ +A++ G +V ANK + E + K + + +E+ V G+PVI ++ LS
Sbjct: 86 ELVLKAIENGKHVVTANKALIAVHGNEIFAKAREKGVIVAFEAAVAGGIPVIKAIREGLS 145
Query: 73 SGDPVHRIVGSLSGTLGYVMSEV-EDGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKA 131
+ + ++ + G ++GT +++SE+ E G+ V+ A++LGY E DP D+ G+D A K
Sbjct: 146 A-NRINWLAGIINGTGNFILSEMREKGRTFPDVLAEAQALGYAEADPTFDVEGIDAAHKL 204
Query: 132 LILARL-LGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNG 190
ILA + G+ + D E + + S + + L +G R S
Sbjct: 205 TILASIAFGIPLQFDKAYTEGI------SKLTSADVNYADALGYRIKHLGVARRTES--- 255
Query: 191 NVLRYVCVIEGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGNDT 250
G V +P + + + G N + + + GAGAG +
Sbjct: 256 ----------GFELRVHPTLIPSDRLIANVNGVMNAVMVNGDAVGST--LYYGAGAGMEP 303
Query: 251 TAAGVLADILDI 262
TA+ V+AD++D+
Sbjct: 304 TASSVVADLVDV 315
>sp|Q9ZL20|DHOM_HELPJ Homoserine dehydrogenase OS=Helicobacter pylori (strain J99) GN=hom
PE=3 SV=1
Length = 421
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 25 CIVLANKKPLTSTKEDYDKLVSRPRRIRYESTVGAGLPVIASLNRILSSGDPVHRIVGSL 84
V ANK L + + ++ +++ I +E++V G+P+I +L LS+ + + G L
Sbjct: 97 AFVTANKAMLAYHRYELEQ-IAKNTPIGFEASVCGGIPIIKALKDGLSA-NHILSFKGIL 154
Query: 85 SGTLGYVMSEV-EDGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKALILARL-LGMRI 142
+GT Y++S++ ++ +K A+ LGY E +P D+ G+D A K LILA L G+
Sbjct: 155 NGTSNYILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDA 214
Query: 143 NIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNGNVLRYVCVIEGS 202
++ I IE + E++ P+ M + LL + K + LR + +
Sbjct: 215 KLEEILIEGI--EKIEPDDMEFAKEFGYSIKLLG------IAKKHQDCIELRVHPSMIKN 266
Query: 203 RCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGNDTTAAGVLADILDI 262
C L ++ G N + + E + GAGAG + TA+ V++DI++I
Sbjct: 267 ECM-----------LSKVDGVMNAISVIGDKVGET--LYYGAGAGGEPTASAVISDIIEI 313
>sp|P56429|DHOM_HELPY Homoserine dehydrogenase OS=Helicobacter pylori (strain ATCC 700392
/ 26695) GN=hom PE=3 SV=1
Length = 421
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 25/240 (10%)
Query: 25 CIVLANKKPLTSTKEDYDKLVSRPRRIRYESTVGAGLPVIASLNRILSSGDPVHRIVGSL 84
V ANK L + + ++ ++ I +E++V G+P+I +L LS+ + + G L
Sbjct: 97 AFVTANKAMLAYHRYELEQ-TAKNTPIGFEASVCGGIPIIKALKDGLSA-NHILSFKGIL 154
Query: 85 SGTLGYVMSEV-EDGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKALILARL-LGMRI 142
+GT Y++S++ ++ +K A+ LGY E +P D+ G+D A K LILA L G+
Sbjct: 155 NGTSNYILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDA 214
Query: 143 NIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNGNVLRYVCVIEGS 202
++ I IE + E++ P+ M + LL + K + LR + +
Sbjct: 215 KLEEILIEGI--EKIEPDDMEFAKEFGYSIKLLG------IAKKHPDCIELRVHPSMIKN 266
Query: 203 RCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGNDTTAAGVLADILDI 262
C L ++ G N + + E + GAGAG + TA+ V++DI++I
Sbjct: 267 ECM-----------LSKVDGVMNAISVIGDKVGET--LYYGAGAGGEPTASAVISDIIEI 313
>sp|P08499|DHOM_CORGL Homoserine dehydrogenase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=hom PE=1 SV=1
Length = 445
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 38/259 (14%)
Query: 14 EILTQAVDLGCCIVLANKKPLTSTKEDYDKLVSRPR-RIRYESTVGAGLPVIASLNRILS 72
E++ A+ G +V ANK + + + + +E+ V +PV+ L R L+
Sbjct: 102 EVVLAALKAGKSVVTANKALVAAHSAELADAAEAANVDLYFEAAVAGAIPVVGPLRRSLA 161
Query: 73 SGDPVHRIVGSLSGTLGYVMSEVED-GKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKA 131
GD + ++G ++GT +++ ++ G + + A LGY E DP D+ G D A KA
Sbjct: 162 -GDQIQSVMGIVNGTTNFILDAMDSTGADYADSLAEATRLGYAEADPTADVEGHDAASKA 220
Query: 132 LILARL-LGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNG 190
ILA + R+ D + E + NI + + + A G
Sbjct: 221 AILASIAFHTRVTADDVYCEGI------SNISAAD-----------------IEAAQQAG 257
Query: 191 NVLRYVCVIEGSRCTVGIQE---------LPKNSPLGRLRGSDNVLEIYSRCYSEQPLVI 241
+ ++ + + E G LP + PL + S N I+ + L+
Sbjct: 258 HTIKLLAICEKFTNKEGKSAISARVHPTLLPVSHPLASVNKSFNA--IFVEAEAAGRLMF 315
Query: 242 QGAGAGNDTTAAGVLADIL 260
G GAG TA+ VL D++
Sbjct: 316 YGNGAGGAPTASAVLGDVV 334
>sp|P46806|DHOM_MYCLE Homoserine dehydrogenase OS=Mycobacterium leprae (strain TN) GN=hom
PE=3 SV=1
Length = 441
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 26/248 (10%)
Query: 19 AVDLGCCIVLANKKPLT-STKEDYDKLVSRPRRIRYESTVGAGLPVIASLNRILSSGDPV 77
A++ G +V ANK L ST E S + +E+ V +PVI L + L+ GD V
Sbjct: 95 ALEHGKSVVTANKALLAASTGELAQAAESAHVDLYFEAAVAGAIPVIRPLTQSLA-GDTV 153
Query: 78 HRIVGSLSGTLGYVMSEVED-GKPLSQVVKAAKSLGYTEPDPRDDLSGMD-VARKALILA 135
R+ G ++GT Y++S ++ G + A++LGY E DP D+ G D A+ A++ +
Sbjct: 154 LRVAGIVNGTTNYILSAMDSTGADYDSALAGARALGYAEADPTADVEGHDAAAKAAILAS 213
Query: 136 RLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLST---GLPLLDNDIGERVRKASLNGNV 192
R+ D + E G ++ DF+S G + I ER+ A V
Sbjct: 214 IAFHTRVTADDVYRE-------GITKITPADFVSARALGCTIKLLFICERITAADGQQRV 266
Query: 193 LRYVCVIEGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGNDTTA 252
+R + +P + PL + G+ N + + + L+ G GAG TA
Sbjct: 267 --------SARVYPAL--VPMSHPLATVSGAFNAVVVEAEAAGR--LMFYGQGAGGAPTA 314
Query: 253 AGVLADIL 260
+ V D++
Sbjct: 315 SAVTGDLV 322
>sp|P37144|DHON_METGL Homoserine dehydrogenase OS=Methylobacillus glycogenes GN=hom PE=3
SV=1
Length = 412
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 73 SGDPVHRIVGSLSGTLGYVMSEV-EDGKPLSQVVKAAKSLGYTEPDPRDDLSGMDVARKA 131
+ + + I G ++GT +++SE+ E G + V+K A+ LGY E DP D+ G+D A K
Sbjct: 147 AANRIEWIAGIINGTTNFILSEMREKGLAFADVLKEAQRLGYAEADPTFDVEGIDAAHKL 206
Query: 132 LILARLLGMRIN 143
+ILA +L + ++
Sbjct: 207 MILAAMLWLFVH 218
>sp|P63629|DHOM_MYCTU Homoserine dehydrogenase OS=Mycobacterium tuberculosis GN=hom PE=3
SV=1
Length = 441
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 26/248 (10%)
Query: 19 AVDLGCCIVLANKKPL-TSTKEDYDKLVSRPRRIRYESTVGAGLPVIASLNRILSSGDPV 77
A++ G +V ANK L TST E S + +E+ V +PVI L + L+ GD V
Sbjct: 95 ALERGKSVVTANKALLATSTGELAQAAESAHVDLYFEAAVAGAIPVIRPLTQSLA-GDTV 153
Query: 78 HRIVGSLSGTLGYVMSEVED-GKPLSQVVKAAKSLGYTEPDPRDDLSGMD-VARKALILA 135
R+ G ++GT Y++S ++ G + + A +LGY E DP D+ G D A+ A++ +
Sbjct: 154 LRVAGIVNGTTNYILSAMDSTGADYASALADASALGYAEADPTADVEGYDAAAKAAILAS 213
Query: 136 RLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNGNVLRY 195
R+ D + E + ++ P L + LL I ER
Sbjct: 214 IAFHTRVTADDVYREGI--TKVTPADFGSAHALGCTIKLL--SICER------------- 256
Query: 196 VCVIEGSR---CTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGNDTTA 252
+ EGS+ V +P + PL + G+ N + + + L+ G GAG TA
Sbjct: 257 ITTDEGSQRVSARVYPALVPLSHPLAAVNGAFNAVVVEAEAAGR--LMFYGQGAGGAPTA 314
Query: 253 AGVLADIL 260
+ V D++
Sbjct: 315 SAVTGDLV 322
>sp|P63630|DHOM_MYCBO Homoserine dehydrogenase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=hom PE=3 SV=1
Length = 441
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 26/248 (10%)
Query: 19 AVDLGCCIVLANKKPL-TSTKEDYDKLVSRPRRIRYESTVGAGLPVIASLNRILSSGDPV 77
A++ G +V ANK L TST E S + +E+ V +PVI L + L+ GD V
Sbjct: 95 ALERGKSVVTANKALLATSTGELAQAAESAHVDLYFEAAVAGAIPVIRPLTQSLA-GDTV 153
Query: 78 HRIVGSLSGTLGYVMSEVED-GKPLSQVVKAAKSLGYTEPDPRDDLSGMD-VARKALILA 135
R+ G ++GT Y++S ++ G + + A +LGY E DP D+ G D A+ A++ +
Sbjct: 154 LRVAGIVNGTTNYILSAMDSTGADYASALADASALGYAEADPTADVEGYDAAAKAAILAS 213
Query: 136 RLLGMRINIDSIKIESLYPEEMGPNIMSVEDFLSTGLPLLDNDIGERVRKASLNGNVLRY 195
R+ D + E + ++ P L + LL I ER
Sbjct: 214 IAFHTRVTADDVYREGI--TKVTPADFGSAHALGCTIKLL--SICER------------- 256
Query: 196 VCVIEGSR---CTVGIQELPKNSPLGRLRGSDNVLEIYSRCYSEQPLVIQGAGAGNDTTA 252
+ EGS+ V +P + PL + G+ N + + + L+ G GAG TA
Sbjct: 257 ITTDEGSQRVSARVYPALVPLSHPLAAVNGAFNAVVVEAEAAGR--LMFYGQGAGGAPTA 314
Query: 253 AGVLADIL 260
+ V D++
Sbjct: 315 SAVTGDLV 322
>sp|B6YQ44|IF2_AZOPC Translation initiation factor IF-2 OS=Azobacteroides
pseudotrichonymphae genomovar. CFP2 GN=infB PE=3 SV=1
Length = 912
Score = 32.0 bits (71), Expect = 4.3, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 57 VGAGLPVIASLNRILSSGDPVHRIVGSLSGTLGYVMSEVED--GKPLSQVVKAAKSLGYT 114
V AG+P+I ++N+I G +I +L+ ++ Y+ VED GK SQ + A K +G
Sbjct: 510 VAAGVPIIFAINKIDKHGANPEKIKETLA-SMNYL---VEDWGGKYQSQDISAKKGIGIQ 565
Query: 115 EPDPRDDLSGMDVARKALILARLLGMRINIDSIKIESL 152
E + K L+ A LL ++ N I S+
Sbjct: 566 E-----------LLEKVLLEAELLDLKANPKRYAIGSI 592
>sp|Q59800|G3P_STRAU Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces
aureofaciens GN=gap PE=3 SV=1
Length = 332
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 176 DNDIGERVRKASLNGNVLRYVCVIEGSRCTVGIQELPKNSPLGRLRGSDNVLEIYSRCYS 235
D G R ++ GNVL V++G R TV + P N P L G D VLE R S
Sbjct: 48 DTTSGRLGRPVTVEGNVL----VVDGRRITVTAEREPANLPWAEL-GVDIVLEATGRFTS 102
Query: 236 EQ 237
+
Sbjct: 103 AK 104
>sp|Q72CQ9|END4_DESVH Probable endonuclease 4 OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=nfo PE=3
SV=1
Length = 282
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 218 GRLRGSDNVLEIYSRCYSEQPLVIQGAGAGNDTTAAGVLADILDIQD 264
G LR + N+ E++ RC + P+++ AG T G L D+ +I D
Sbjct: 118 GILRAARNIDEVFDRCGGQTPVLLLENTAGQGTCLGGDLNDLAEIID 164
>sp|Q9BZF1|OSBL8_HUMAN Oxysterol-binding protein-related protein 8 OS=Homo sapiens
GN=OSBPL8 PE=1 SV=3
Length = 889
Score = 31.2 bits (69), Expect = 7.7, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 99 KPLSQVVKAAKSLGYTEPDPR-DDLSGMDVARKALILARLLGMRINIDSIKIESL--YPE 155
KP Q K AK GY+ P+P D SG + R G+ + IES+ E
Sbjct: 785 KPTRQQKKVAK--GYSSPEPDIQDSSGSEAQSVKPSTRRKKGIELGDIQSSIESIKQTQE 842
Query: 156 EMGPNIMSVEDFLSTGLPLLD 176
E+ NIM++ + L + P D
Sbjct: 843 EIKRNIMALRNHLVSSTPATD 863
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,936,404
Number of Sequences: 539616
Number of extensions: 4173879
Number of successful extensions: 11197
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 11101
Number of HSP's gapped (non-prelim): 50
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)