BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040628
(124 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 201 bits (510), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 114/121 (94%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
CIT+EELA I+SLDQNPTEEEL++MISEVD +GNGTIEF EFL+LMA+K+K+ +A+EEL
Sbjct: 26 CITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDTDAEEEL 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
KEAFKVFDKDQ+GYIS +ELRHVM+N+GEK+TDEE+EQM++EADLDGDGQ+NYEEF +MM
Sbjct: 86 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 145
Query: 121 L 121
+
Sbjct: 146 M 146
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
+ KEAF +FDKD DG I+ EL V+ ++ + T+EEL+ M+ E D DG+G I ++EF
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 119 MMLLPV 124
+M V
Sbjct: 71 LMAKKV 76
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 182 bits (462), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 108/121 (89%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
CIT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFLNLMARKMK+ +++EEL
Sbjct: 27 CITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEEL 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
KEAF+VFDKDQ+G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQINYEEF ++M
Sbjct: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
Query: 121 L 121
+
Sbjct: 147 M 147
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 MARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
MA ++ +++ E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D D
Sbjct: 1 MADQLTDDQISE-FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 107 GDGQINYEEFARMM 120
G+G I++ EF +M
Sbjct: 60 GNGTIDFPEFLNLM 73
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E DV+G+G I + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 181 bits (459), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 108/121 (89%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
CIT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFLNLMARKMK+ +++EEL
Sbjct: 27 CITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEEL 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
KEAF+VFDKDQ+G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQINY+EF ++M
Sbjct: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
Query: 121 L 121
+
Sbjct: 147 M 147
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 MARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
MA ++ E++ E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D D
Sbjct: 1 MADQLTEDQISE-FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 107 GDGQINYEEFARMM 120
G+G I++ EF +M
Sbjct: 60 GNGTIDFPEFLNLM 73
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E DV+G+G I + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 174 bits (442), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 106/121 (87%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFLNLMARKMK+ +++EEL
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEEL 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
KEAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF ++M
Sbjct: 86 KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Query: 121 L 121
+
Sbjct: 146 M 146
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E DV+G+G + + EF+ +M K
Sbjct: 100 ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 174 bits (442), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 106/121 (87%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFLNLMARKMK+ +++EEL
Sbjct: 23 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEEL 82
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
KEAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF ++M
Sbjct: 83 KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 142
Query: 121 L 121
+
Sbjct: 143 M 143
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 119 MM 120
+M
Sbjct: 68 LM 69
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E DV+G+G + + EF+ +M K
Sbjct: 97 ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 145
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 174 bits (441), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 79/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE++QM+READ+DGDGQ+NYEEF +MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 119 MM 120
MM
Sbjct: 72 MM 73
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 173 bits (439), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 106/121 (87%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFLNLMARKMK+ +++E+L
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKL 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
KEAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF ++M
Sbjct: 86 KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Query: 121 L 121
+
Sbjct: 146 M 146
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E DV+G+G + + EF+ +M K
Sbjct: 100 ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 173 bits (438), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 327 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 386
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 387 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 249 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 305
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I+
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 401 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 173 bits (438), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 30 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 89
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 90 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 45 NLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREAD 104
N MA ++ E E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D
Sbjct: 2 NAMADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 60
Query: 105 LDGDGQINYEEFARMM 120
DG+G I++ EF MM
Sbjct: 61 ADGNGTIDFPEFLTMM 76
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 104 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 152
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 328 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 387
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 388 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 250 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 306
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I+
Sbjct: 307 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 366
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 367 FPEFLTMM 374
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 402 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 450
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 119 MM 120
MM
Sbjct: 72 MM 73
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 119 MM 120
MM
Sbjct: 72 MM 73
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 MARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
MA ++ E E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D D
Sbjct: 1 MADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 107 GDGQINYEEFARMM 120
G+G I++ EF MM
Sbjct: 60 GNGTIDFPEFLTMM 73
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKM 51
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K+
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKL 150
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 28 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 87
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 88 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
Query: 119 MM 120
MM
Sbjct: 73 MM 74
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 102 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 150
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 327 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 386
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 387 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 249 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 305
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I+
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 401 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 32 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 91
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 92 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Query: 119 MM 120
MM
Sbjct: 77 MM 78
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 106 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 100 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 24 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 83
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 84 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 119 MM 120
MM
Sbjct: 69 MM 70
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 98 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 146
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 290 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 349
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 350 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 409
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 212 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 268
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I+
Sbjct: 269 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 328
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 329 FPEFLTMM 336
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 172 bits (437), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 22 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 81
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 82 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 141
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 119 MM 120
MM
Sbjct: 67 MM 68
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 96 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 144
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 172 bits (437), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 119 MM 120
MM
Sbjct: 72 MM 73
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 172 bits (437), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 24 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 83
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 84 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 119 MM 120
MM
Sbjct: 69 MM 70
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 98 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 172 bits (437), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 25 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 84
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 85 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 119 MM 120
MM
Sbjct: 70 MM 71
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 172 bits (436), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 23 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 82
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 83 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 142
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 119 MM 120
MM
Sbjct: 68 MM 69
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 172 bits (436), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 24 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 83
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 84 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 119 MM 120
MM
Sbjct: 69 MM 70
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 172 bits (436), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 293 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 352
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 353 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 25 NMISEVDVNGNGTIEFGEFLNLMARKMKENEAQE-------ELKEAFKVFDKDQDGYISP 77
+++ +++ G I F E N++ K++ N + E KEAF +FDKD DG I+
Sbjct: 240 TLVNRIELKG---IGFKEDGNILGHKLEYNSRDQLTEEQIAEFKEAFSLFDKDGDGTITT 296
Query: 78 NELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF MM
Sbjct: 297 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 367 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 172 bits (436), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 293 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 352
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 353 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 25 NMISEVDVNGNGTIEFGEFLNLMARKMKEN-------EAQEELKEAFKVFDKDQDGYISP 77
+++ +++ G I F E N++ K++ N E E KEAF +FDKD DG I+
Sbjct: 240 TLVNRIELKG---IGFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITT 296
Query: 78 NELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF MM
Sbjct: 297 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 367 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 172 bits (435), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK +++EE+
Sbjct: 327 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEI 386
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 387 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 249 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 305
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I+
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 401 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +G+GTI+F EFL +MARKMK+ +++EE+
Sbjct: 326 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEI 385
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 386 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 248 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 304
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DGDG I+
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 365 FPEFLTMM 372
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 400 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +G+GTI+F EFL +MARKMK+ +++EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DGDG I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 100 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+REA++DGDGQ+NYEEF +MM
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMM 145
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E +++G+G + + EF+ +M K
Sbjct: 100 ISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTAK 148
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF MM
Sbjct: 86 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 100 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 170 bits (431), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GE +TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 119 MM 120
MM
Sbjct: 72 MM 73
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 170 bits (431), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GE +TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 100 ISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 170 bits (431), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF MM
Sbjct: 87 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 MARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
MA ++ E E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D D
Sbjct: 1 MADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 107 GDGQINYEEFARMM 120
G+G I++ EF MM
Sbjct: 60 GNGTIDFPEFLTMM 73
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 170 bits (431), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF MM
Sbjct: 87 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 MARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
MA ++ E E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D D
Sbjct: 1 MADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 107 GDGQINYEEFARMM 120
G+G I++ EF MM
Sbjct: 60 GNGTIDFPEFLTMM 73
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 170 bits (431), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF MM
Sbjct: 86 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 100 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTAK 148
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MAR MK+ +++EE+
Sbjct: 327 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEI 386
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 387 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 249 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 305
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I+
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 401 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL+LMARKMKE +++EEL
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEEL 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EAFKVFD+D +G IS ELRHVM N+GEK+TD+E+++M+READ+DGDG INYEEF RMM
Sbjct: 86 IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
Query: 121 L 121
+
Sbjct: 146 V 146
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T++E+ MI E D++G+G I + EF+ +M K
Sbjct: 99 LISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 148
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL+LMARKMKE +++EEL
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEEL 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EAFKVFD+D +G IS ELRHVM N+GEK+TD+E+++M+READ+DGDG INYEEF RMM
Sbjct: 86 IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
Query: 121 L 121
+
Sbjct: 146 V 146
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T++E+ MI E D++G+G I + EF+ +M K
Sbjct: 99 LISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 148
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 170 bits (430), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +G+GTI+F EFL +MARKMK +++EE+
Sbjct: 326 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEI 385
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 386 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 248 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNLPDQL 304
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DGDG I+
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 365 FPEFLTMM 372
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 400 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 170 bits (430), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +G+GTI+F EFL +MARKMK +++EE+
Sbjct: 327 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEI 386
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 387 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 249 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 305
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DGDG I+
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 365
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 401 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 169 bits (429), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +G+GTI+F EFL +MARKMK +++EE+
Sbjct: 326 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEI 385
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 386 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 248 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNLPDQL 304
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DGDG I+
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 113 YEEFARMM 120
+ EF MM
Sbjct: 365 FPEFLTMM 372
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 400 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 169 bits (429), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 104/120 (86%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +G+GTI+F EFL +MARKMK+ +++EE+
Sbjct: 318 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEI 377
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF +MM
Sbjct: 378 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DGDG I++ EF
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLI 362
Query: 119 MM 120
MM
Sbjct: 363 MM 364
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 392 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 440
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 169 bits (428), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 103/120 (85%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+RE+D+DGDGQ+NYEEF MM
Sbjct: 87 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMM 146
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 MARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
MA ++ E E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D D
Sbjct: 1 MADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 107 GDGQINYEEFARMM 120
G+G I++ EF MM
Sbjct: 60 GNGTIDFPEFLTMM 73
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTSK 149
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 166 bits (419), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 102/120 (85%), Gaps = 2/120 (1%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK++E EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDSE--EEI 83
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF MM
Sbjct: 84 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 143
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 98 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 146
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 165 bits (418), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 101/121 (83%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
CIT EL ++SL QNPTE ELR+M+SE+D +GNGT++F EFL +MARKMK+ + +EE+
Sbjct: 26 CITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +G++S ELRHVM +GEK++DEE+++M+R AD DGDGQ+NYEEF R++
Sbjct: 86 REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
Query: 121 L 121
+
Sbjct: 146 V 146
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL M+ E D DG+G +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
++ EL + L + ++EE+ MI D +G+G + + EF+ ++ K
Sbjct: 100 VSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 148
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 165 bits (418), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 103/120 (85%), Gaps = 1/120 (0%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ ++ EE+
Sbjct: 22 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS-EEI 80
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+REA++DGDGQ+NYEEF +MM
Sbjct: 81 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMM 140
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 119 MM 120
MM
Sbjct: 67 MM 68
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 161 bits (408), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 101/119 (84%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
IT ++L ++SL QNPTE EL++MI+EV +GNGTI+F +FL +MARKMK+ +++EE++
Sbjct: 328 ITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIR 387
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EAF+VF KD +GYIS +LRHVM N+GEK+TDEE+++M+REA +DGDGQ+NYE+F +MM
Sbjct: 388 EAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMM 446
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 14/128 (10%)
Query: 4 IEELAVAIKSLDQNPTEEELR----NMISEVDVNGNGTIEFGEFLNLMARKMKEN----- 54
I+E + K T E++ +++ +++ G I+F E N++ K++ N
Sbjct: 249 IQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQL 305
Query: 55 --EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E E KEAF +FDKD DG I+ +L VM ++G+ T+ EL+ M+ E DG+G I+
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTID 365
Query: 113 YEEFARMM 120
+ +F MM
Sbjct: 366 FPQFLTMM 373
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ +L + +L + T+EE+ MI E ++G+G + + +F+ +M K
Sbjct: 401 ISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMMTAK 449
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 156 bits (394), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 95/118 (80%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL +SL QNPTE EL++ I+EVD +GNGTI+F EFL ARK K+ +++EE+
Sbjct: 27 TITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEI 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
+EAF+VFDKD +GYIS ELRHV N+GEK+TDEE++Q +READ+DGDGQ+NYEEF +
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQ 144
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E KEAF +FDKD DG I+ EL V ++G+ T+ EL+ + E D DG+G I++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 69
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL +L + T+EE+ I E D++G+G + + EF+ K
Sbjct: 101 ISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQXXTAK 149
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 154 bits (389), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 95/118 (80%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL +SL QNPTE EL++ I+EVD +GNGTI+F EFL ARK K+ +++EE+
Sbjct: 26 TITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEI 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
+EAF+VFDKD +GYIS ELRHV N+GEK+TDEE+++ +READ+DGDGQ+NYEEF +
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E KEAF +FDKD DG I+ EL V ++G+ T+ EL+ + E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 68
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL +L + T+EE+ I E D++G+G + + EF+ K
Sbjct: 100 ISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 148 bits (374), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 94/119 (78%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I EL +++L QNPTE EL+++I+E + N NG + F EF +MA++M+E + +EE++
Sbjct: 27 IATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMR 86
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EAFK+FD+D DG+ISP ELR VM+N+GEKVTDEE+++M+READ DGDG INYEEF M+
Sbjct: 87 EAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMI 145
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E K+AF FDK+ G I+ EL +M +G+ T+ EL+ ++ EA+ + +GQ+N+ EF
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCG 70
Query: 119 MM 120
+M
Sbjct: 71 IM 72
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D +G+G I + EF+ ++++K
Sbjct: 100 ISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQK 148
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 147 bits (370), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 92/117 (78%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
IT +EL +SL NPTE EL++ I+EVD +GNGTI F EFL AR K+ +++EE++
Sbjct: 27 ITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIR 86
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
EAF+VFDKD +GYIS ELRHV N+GEK+TDEE+++ +READ+DGDGQ+NYEEF +
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E KEAF +FDKD DG I+ EL V ++G T+ EL+ + E D DG+G IN+ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF 68
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL +L + T+EE+ I E D++G+G + + EF+ K
Sbjct: 100 ISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 128 bits (321), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I+ ELA ++SL +P+E E+ ++++E+DV+GN IEF EFL LM+R++K N++++EL
Sbjct: 27 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQEL 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EAFKVFDK+ DG IS EL+HV+ +IGEK+TD E++ M+RE DG G+IN ++FA ++
Sbjct: 87 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 145
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD +G IS +EL VM ++G ++ E+ ++ E D+DG+ QI + EF
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 71
Query: 119 MM 120
+M
Sbjct: 72 LM 73
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 127 bits (320), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I+ ELA ++SL +P+E E+ ++++E+DV+GN IEF EFL LM+R++K N++++EL
Sbjct: 27 SISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQEL 86
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EAFKVFDK+ DG IS EL+HV+ +IGEK+TD E+++M+RE DG G+IN ++FA ++
Sbjct: 87 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD G IS +EL VM ++G ++ E+ ++ E D+DG+ I + EF
Sbjct: 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLA 71
Query: 119 MM 120
+M
Sbjct: 72 LM 73
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 127 bits (320), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I+ ELA ++SL +P+E E+ ++++E+DV+GN IEF EFL LM+R++K N++++EL
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQEL 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EAFKVFDK+ DG IS EL+HV+ +IGEK+TD E++ M+RE DG G+IN ++FA ++
Sbjct: 86 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 144
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD +G IS +EL VM ++G ++ E+ ++ E D+DG+ QI + EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 86/120 (71%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I ++EL VA+++L P +EE++ MISE+D G G + FG+FL +M +KM E + +EE+
Sbjct: 22 TIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI 81
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+AFK+FD D+ G IS L+ V +GE +TDEEL++M+ EAD DGDG+++ +EF R+M
Sbjct: 82 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E++EAF +FD D G I EL+ M +G + EE+++M+ E D +G G++N+
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 115 EFARMM 120
+F +M
Sbjct: 63 DFLTVM 68
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ + L K L +N T+EEL+ MI E D +G+G + EFL +M +
Sbjct: 96 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 117 bits (293), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 88/120 (73%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I +EL VA+++L P +EE++ MI+++D +G+GTI+F EFL +M KM E +++EE+
Sbjct: 24 TIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEI 83
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+AF++FD D+ G IS L+ V +GE +TDEEL++M+ EAD DGDG++N EEF R+M
Sbjct: 84 MKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIM 143
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E++EAF +FD D G I EL+ M +G + EE+++M+ + D DG G I++E
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFE 64
Query: 115 EFARMM 120
EF +MM
Sbjct: 65 EFLQMM 70
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ + L K L +N T+EEL+ MI E D +G+G + EF +M +
Sbjct: 98 ISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMKK 145
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 117 bits (293), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 66/69 (95%)
Query: 53 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
+ +A+EELKEAFKVFDKDQ+GYIS +ELRHVM+N+GEK+TDEE+EQM++EADLDGDGQ+N
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 113 YEEFARMML 121
YEEF +MM+
Sbjct: 64 YEEFVKMMM 72
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M
Sbjct: 26 ISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 19 TEEELRNMISEVDVNGNGTIEFGEFLNLM---ARKMKENEAQEELKEAFKVFDKDQDGYI 75
EEEL+ D + NG I E ++M K+ + E ++ +KEA D D DG +
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEA----DLDGDGQV 62
Query: 76 SPNELRHVMMNI 87
+ E +MM +
Sbjct: 63 NYEEFVKMMMTV 74
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 116 bits (291), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/67 (77%), Positives = 65/67 (97%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
+A+EELKEAFKVFDKDQ+GYIS +ELRHVM+N+GEK+TDEE+EQM++EADLDGDGQ+NYE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 115 EFARMML 121
EF +MM+
Sbjct: 61 EFVKMMM 67
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M
Sbjct: 21 ISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 19 TEEELRNMISEVDVNGNGTIEFGEFLNLM---ARKMKENEAQEELKEAFKVFDKDQDGYI 75
EEEL+ D + NG I E ++M K+ + E ++ +KEA D D DG +
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEA----DLDGDGQV 57
Query: 76 SPNELRHVMMNI 87
+ E +MM +
Sbjct: 58 NYEEFVKMMMTV 69
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQE 58
I+++EL ++ L Q PT+EEL +I EVD +G+GTI+F EFL +M R+MKE+ +++E
Sbjct: 34 ISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEE 93
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
EL E F++FD++ DGYI EL + GE VTDEE+E ++++ D + DG+I+++EF +
Sbjct: 94 ELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLK 153
Query: 119 MM 120
MM
Sbjct: 154 MM 155
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG
Sbjct: 7 ARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG 66
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQE 58
I+++EL ++ L Q PT+EEL +I EVD +G+GTI+F EFL +M R+MKE+ +++E
Sbjct: 34 ISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEE 93
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
EL E F++FD++ DGYI EL + GE VTDEE+E ++++ D + DG+I+++EF +
Sbjct: 94 ELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLK 153
Query: 119 MM 120
MM
Sbjct: 154 MM 155
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG
Sbjct: 7 ARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG 66
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 76/97 (78%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I+ ELA ++SL +P+E E+ ++++E+DV+GN IEF EFL LM+R++K N++++EL
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQEL 85
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELE 97
EAFKVFDK+ DG IS EL+HV+ +IGEK+TD ELE
Sbjct: 86 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD +G IS +EL VM ++G ++ E+ ++ E D+DG+ QI + EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQE 58
I+ +EL ++ L QNPT+EEL +I EVD +G+GTI+F EFL +M R+MKE+ +++E
Sbjct: 37 ISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEE 96
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
EL++ F++FDK+ DG+I EL ++ GE VT+E++E +++++D + DG+I+++EF +
Sbjct: 97 ELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 119 MM 120
MM
Sbjct: 157 MM 158
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQE 58
I+ +EL ++ L QNPT+EEL +I EVD +G+GTI+F EFL +M R+MKE+ +++E
Sbjct: 37 ISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEE 96
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
EL + F++FDK+ DG+I EL ++ GE VT+E++E +++++D + DG+I+++EF +
Sbjct: 97 ELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 119 MM 120
MM
Sbjct: 157 MM 158
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 65/71 (91%)
Query: 50 KMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDG 109
KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 110 QINYEEFARMM 120
Q+NYEEF +MM
Sbjct: 61 QVNYEEFVQMM 71
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 26 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 74
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 110 bits (274), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 88/123 (71%), Gaps = 3/123 (2%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQ 57
CI+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++ + +
Sbjct: 35 CISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTE 94
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++++ D + DG+I+Y+EF
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 118 RMM 120
M
Sbjct: 155 EFM 157
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 110 bits (274), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 86/120 (71%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I +EL VA+++L P +EE++ MISE+D +G+GTI+F EFL +M KM E +++EE+
Sbjct: 44 TIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEI 103
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+AF++FD D G I+ +LR V +GE +T+EEL++M+ EAD + D +I+ +EF R+M
Sbjct: 104 LKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 163
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E++EAF +FD D G I EL+ M +G + EE+++M+ E D DG G I++E
Sbjct: 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 84
Query: 115 EFARMM 120
EF MM
Sbjct: 85 EFLTMM 90
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
ITI++L K L +N TEEEL+ MI+E D N + I+ EF+ +M +
Sbjct: 117 TITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 109 bits (273), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQE 58
I+ +EL ++ L QNPT+EEL +I EVD +G+GTI+F EFL +M R+MKE+ +++E
Sbjct: 37 ISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEE 96
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
EL F++FDK+ DG+I EL ++ GE VT+E++E +++++D + DG+I+++EF +
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 119 MM 120
MM
Sbjct: 157 MM 158
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 109 bits (272), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQE 58
I+ +EL ++ L QNPT+EEL +I EVD +G+GTI+F EFL +M R+MKE+ +++E
Sbjct: 34 ISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEE 93
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
EL F++FDK+ DG+I EL ++ GE VT+E++E +++++D + DG+I+++EF +
Sbjct: 94 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 153
Query: 119 MM 120
MM
Sbjct: 154 MM 155
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG
Sbjct: 7 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 66
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 108 bits (270), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 64/70 (91%)
Query: 51 MKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQ 110
MK+ +++EE++EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 111 INYEEFARMM 120
+NYEEF +MM
Sbjct: 61 VNYEEFVQMM 70
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 25 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 73
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 88/123 (71%), Gaps = 3/123 (2%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQ 57
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++ +++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSE 94
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++++ D + DG+I+Y+EF
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 118 RMM 120
M
Sbjct: 155 EFM 157
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 89/123 (72%), Gaps = 3/123 (2%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQ 57
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++ +++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSE 94
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL + F+++DK+ DGYI +EL+ ++ GE +T++++E+++++ D + DG+I+Y+EF
Sbjct: 95 EELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 118 RMM 120
M
Sbjct: 155 EFM 157
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 89/123 (72%), Gaps = 3/123 (2%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQ 57
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++ +++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSE 94
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL + F++FDK+ DGYI +EL+ ++ GE +T++++E+++++ D + DG+I+Y+E+
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWL 154
Query: 118 RMM 120
M
Sbjct: 155 EFM 157
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQ 57
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++ + +
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTE 94
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++++ D + DG+I+Y+EF
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 118 RMM 120
M
Sbjct: 155 EFM 157
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQE 58
I+ +EL ++ L QNPT+EEL +I EVD +G+GTI+F EFL +M R+MKE+ +++E
Sbjct: 37 ISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEE 96
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
EL F++FDK+ DG+I EL ++ GE V +E++E +++++D + DG+I+++EF +
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 119 MM 120
MM
Sbjct: 157 MM 158
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 63/67 (94%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
+++EELKEAF+VFDKDQ+G+IS ELRHVM N+GEK+TDEE+++M+READ+DGDGQINYE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 115 EFARMML 121
EF ++M+
Sbjct: 61 EFVKVMM 67
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E DV+G+G I + EF+ +M K
Sbjct: 21 ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 69
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 19 TEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPN 78
+EEEL+ D + NG I E ++M + E EE+ E + D D DG I+
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMT-NLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 79 ELRHVMM 85
E VMM
Sbjct: 61 EFVKVMM 67
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 105 bits (262), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 88/123 (71%), Gaps = 3/123 (2%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQ 57
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++ +++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSE 94
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL + F++ DK+ DGYI +EL+ ++ GE +T++++E+++++ D + DG+I+Y+EF
Sbjct: 95 EELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 118 RMM 120
M
Sbjct: 155 EFM 157
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 105 bits (262), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 88/123 (71%), Gaps = 3/123 (2%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN---EAQ 57
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++ +++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSE 94
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL + F++FDK+ DGYI +EL+ ++ GE +T++++E+++++ D + DG+I+Y+E
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXL 154
Query: 118 RMM 120
M
Sbjct: 155 EFM 157
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 105 bits (261), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 62/71 (87%)
Query: 51 MKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQ 110
MKE +++EEL EAFKVFD+D +G IS ELRHVM N+GEK+TD+E+++M+READ+DGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 111 INYEEFARMML 121
INYEEF RMM+
Sbjct: 61 INYEEFVRMMV 71
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T++E+ MI E D++G+G I + EF+ +M K
Sbjct: 24 LISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 73
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM---ARKMKENEAQEELKEAFKVFDKD 70
+ + +EEEL D +GNG I E ++M K+ ++E E ++EA D D
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA----DID 56
Query: 71 QDGYISPNELRHVMMN 86
DG+I+ E +M++
Sbjct: 57 GDGHINYEEFVRMMVS 72
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 62/68 (91%)
Query: 53 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
+ +++EE++EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+N
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 113 YEEFARMM 120
YEEF +MM
Sbjct: 61 YEEFVQMM 68
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 23 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 71
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 104 bits (259), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 61/67 (91%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
+++EE++EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 114 EEFARMM 120
EEF +MM
Sbjct: 61 EEFVQMM 67
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMA 48
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M
Sbjct: 22 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 68
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 63/70 (90%)
Query: 51 MKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQ 110
MK+ +++EE++EAF+V DKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 111 INYEEFARMM 120
+NYEEF +MM
Sbjct: 82 VNYEEFVQMM 91
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 46 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 94
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 61/67 (91%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
+++EE++EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 114 EEFARMM 120
EEF +MM
Sbjct: 61 EEFVQMM 67
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M
Sbjct: 22 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 103 bits (256), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 59/64 (92%)
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+EE++EAF+VFDKD +GYIS ELRHVM N+GEK+TDEE+++M+READ+DGDGQ+NYEEF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 117 ARMM 120
+MM
Sbjct: 61 VQMM 64
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ EL + +L + T+EE+ MI E D++G+G + + EF+ +M K
Sbjct: 19 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 67
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 102 bits (254), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 62/68 (91%)
Query: 53 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
+ +++EE++EAF+VFDKD +GYIS +LRHVM N+GEK+TDEE+++M+READ+DGDGQ+N
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 113 YEEFARMM 120
YE+F +MM
Sbjct: 62 YEDFVQMM 69
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I+ +L + +L + T+EE+ MI E D++G+G + + +F+ +M K
Sbjct: 24 ISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQMMTAK 72
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 98.6 bits (244), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 59/67 (88%)
Query: 22 ELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELR 81
EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE++EAF+VFDKD +GYIS ELR
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 82 HVMMNIG 88
HVM N+G
Sbjct: 62 HVMTNLG 68
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 95 ELEQMVREADLDGDGQINYEEFARMM 120
EL+ M+ E D DG+G I++ EF MM
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMM 27
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CIT+EELA I+SLDQNPTEEEL++MISEVD +GNGTIEF EFL+LMA+K+K+
Sbjct: 26 CITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDT 79
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
+ KEAF +FDKD DG I+ EL V+ ++ + T+EEL+ M+ E D DG+G I ++EF
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 31 DVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM 84
D +G+G I E ++ R + +N +EEL++ D D +G I +E +M
Sbjct: 20 DKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 85.5 bits (210), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 47/51 (92%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKM 51
CIT+EELA I+SLDQNPTEEEL++MISEVD +GNGTIEF EFL+LMA+K+
Sbjct: 26 CITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKV 76
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
+ KEAF +FDKD DG I+ EL V+ ++ + T+EEL+ M+ E D DG+G I ++EF
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 31 DVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM 84
D +G+G I E ++ R + +N +EEL++ D D +G I +E +M
Sbjct: 20 DKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 85.5 bits (210), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 54/65 (83%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +++EE+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 85
Query: 61 KEAFK 65
+EAF+
Sbjct: 86 REAFR 90
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 85.1 bits (209), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 40 FGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQM 99
FG+FL +M +KM E + +EE+ +AFK+FD D+ G IS L+ V +GE +TDEEL++M
Sbjct: 3 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 62
Query: 100 VREADLDGDGQINYEEFARMM 120
+ EAD DGDG+++ +EF R+M
Sbjct: 63 IDEADRDGDGEVSEQEFLRIM 83
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ + L K L +N T+EEL+ MI E D +G+G + EFL +M +
Sbjct: 38 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 85
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 85.1 bits (209), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 79/119 (66%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I ++EL VA ++L P +EE++ ISE+D G G FG+FL + +K E + +EE+
Sbjct: 47 TIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLTVXTQKXSEKDTKEEI 106
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARM 119
+AFK+FD D+ G IS L+ V +GE +TDEEL++ + EAD DGDG+++ +EF R+
Sbjct: 107 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRI 165
Score = 32.0 bits (71), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E++EAF +FD D G I EL+ +G + EE+++ + E D +G G+ N+
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFG 87
Query: 115 EF 116
+F
Sbjct: 88 DF 89
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 69/115 (60%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
+ EL VA+K+L + E+ ++I E D G +++ +F +M K+ + + +E+K
Sbjct: 40 LDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIK 99
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
AF++FD D G IS LR V +GE +TDEEL M+ E DLDGDG+IN EF
Sbjct: 100 RAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEF 154
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E+ EAF +FD + DG++ +EL+ M +G ++ E+ ++ E D +G + Y+
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 115 EFARMM 120
+F +M
Sbjct: 80 DFYIVM 85
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFL 44
I+I+ L K L + T+EELR MI E D++G+G I EF+
Sbjct: 113 ISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFI 155
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQ---- 57
I +L ++++ PTE EL + ++++N G ++F +F+ LM K+ A
Sbjct: 42 INCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGV 101
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNI-GEKVTDEELEQMVREADLDGDGQINYEEF 116
+EL++AF+ FD + DG IS +ELR M + G +V ++E+++R+ DL+GDG++++EEF
Sbjct: 102 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 161
Query: 117 ARMM 120
RMM
Sbjct: 162 VRMM 165
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL+EAF+ FDKD+DGYI+ +L + M +G T+ EL ++ ++ +++ G +++++F
Sbjct: 25 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 84
Query: 118 RMM 120
+M
Sbjct: 85 ELM 87
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 ITIEELAVAIKSL-DQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ EL A++ L ++ +I +VD+NG+G ++F EF+ +M+R
Sbjct: 119 ISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQ---- 57
I +L ++++ PTE EL + ++++N G ++F +F+ LM K+ A
Sbjct: 28 INCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGV 87
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNI-GEKVTDEELEQMVREADLDGDGQINYEEF 116
+EL++AF+ FD + DG IS +ELR M + G +V ++E+++R+ DL+GDG++++EEF
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 147
Query: 117 ARMM 120
RMM
Sbjct: 148 VRMM 151
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 MARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
M R ++ E EEL+EAF+ FDKD+DGYI+ +L + M +G T+ EL ++ ++ +++
Sbjct: 1 MDRSLRPEEI-EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMN 59
Query: 107 GDGQINYEEFARMM 120
G +++++F +M
Sbjct: 60 LGGHVDFDDFVELM 73
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 ITIEELAVAIKSL-DQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ EL A++ L ++ +I +VD+NG+G ++F EF+ +M+R
Sbjct: 105 ISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQ---- 57
I +L ++++ PTE EL + ++++N G ++F +F+ LM K+ A
Sbjct: 28 INCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGV 87
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNI-GEKVTDEELEQMVREADLDGDGQINYEEF 116
+EL++AF+ FD + DG IS +ELR M + G +V ++E+++R+ DL+GDG++++EEF
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 147
Query: 117 ARMM 120
RMM
Sbjct: 148 VRMM 151
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 MARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
M R ++ E EEL+EAF+ FDKD+DGYI+ +L + M +G T+ EL ++ ++ +++
Sbjct: 1 MDRSLRPEEI-EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMN 59
Query: 107 GDGQINYEEFARMM 120
G +++++F +M
Sbjct: 60 LGGHVDFDDFVELM 73
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 2 ITIEELAVAIKSL-DQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ EL A+++L ++ +I +VD+NG+G ++F EF+ +M+R
Sbjct: 105 ISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN----EAQ 57
++ +++ + ++ L T+ +R +I E D GNG I+F F + AR + E + Q
Sbjct: 31 VSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ 90
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
+EL+EAF+++DK+ +GYIS + +R ++ + E ++ E+L+ M+ E D DG G +++EEF
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Query: 118 RMM 120
+M
Sbjct: 151 GVM 153
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 82.4 bits (202), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I E+L + S+ +NPT+E L M+SE G I F FL + K+ + ++ ++
Sbjct: 24 IDKEDLHDMLASMGKNPTDEYLEGMMSEAP----GPINFTMFLTMFGEKLNGTDPEDVIR 79
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF FD++ G+I + LR ++ +G++ TDEE+++M REA +D G NY EF R++
Sbjct: 80 NAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 138
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
+E KEAF + D+++DG+I +L ++ ++G+ TDE LE M+ EA G IN+ F
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPINFTMFL 62
Query: 118 RMM 120
M
Sbjct: 63 TMF 65
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKE-NEAQEEL 60
++IEEL A++SL +NPT EL + +++ + F + + +K E +E+
Sbjct: 22 VSIEELGSALRSLGKNPTNAELNTIKGQLNAK---EFDLATFKTVYRKPIKTPTEQSKEM 78
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+AF+ DK+ +G I ELR +++N+G+ +T E+E++++E + GDG INYE F M+
Sbjct: 79 LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDML 138
Query: 121 L 121
+
Sbjct: 139 V 139
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
+ ++++E F++FDKD DG +S EL + ++G+ T+ EL + GQ+N +E
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKE 54
Query: 116 F 116
F
Sbjct: 55 F 55
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
IT +EL +K + E E+++++ D++ +GTI++GEF+ + + E +E L
Sbjct: 26 TITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVH-LNKLEREENL 84
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF FDKD GYI+ +E++ + G + D ++ M++E D D DGQI+Y EFA MM
Sbjct: 85 VSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMM 142
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
LKE FK+ D D G I+ +EL+ + +G ++ + E++ ++ AD+D G I+Y EF
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 68
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
IT++E+ A K D + + +MI E+D + +G I++GEF +M RK K N
Sbjct: 99 ITLDEIQQACK--DFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMM-RKRKGN 148
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CIT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFLNLMARKMK+
Sbjct: 26 CITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT 79
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
+E E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++
Sbjct: 6 DEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 114 EEFARMM 120
EF +M
Sbjct: 66 PEFLNLM 72
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
E+L+ AF+ FD+D DG+I+ +ELR M +G+ + EEL+ M+READ+D DG++NYEEFA
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 118 RMM 120
RM+
Sbjct: 66 RML 68
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
IT++EL A+ L Q +EEL MI E DV+ +G + + EF ++A++
Sbjct: 23 ITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE 71
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL 80
E+L+ D +G+G I E MA + + QEEL + D DQDG ++ E
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMA-GLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 81 RHVM 84
++
Sbjct: 65 ARML 68
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
+ EL VA K+L + E+ ++I E D G ++ +F + K+ + + +E+K
Sbjct: 40 LDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIVXGEKILKRDPLDEIK 99
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
AF++FD D G IS LR V +GE +TDEEL + E DLDGDG+IN EF
Sbjct: 100 RAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEF 154
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E+ EAF +FD + DG++ +EL+ +G ++ E+ ++ E D +G Y+
Sbjct: 20 EQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYD 79
Query: 115 EF 116
+F
Sbjct: 80 DF 81
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMA 48
I+I+ L K L + T+EELR I E D++G+G I EF+ +
Sbjct: 113 ISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIAICT 159
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 81/124 (65%), Gaps = 9/124 (7%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
+++EE +++ L QNP ++ +I D +GNG ++F EF+ +++ + + +++L+
Sbjct: 37 LSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLR 92
Query: 62 EAFKVFDKDQDGYISPNELRHVM-MNIGEKVTDEELEQMVRE----ADLDGDGQINYEEF 116
AF+++D D+DGYIS EL V+ M +G + D +L+Q+V + AD DGDG+I++EEF
Sbjct: 93 FAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 152
Query: 117 ARMM 120
++
Sbjct: 153 CAVV 156
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 81/125 (64%), Gaps = 9/125 (7%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
+++EE +++ L QNP ++ +I D +GNG ++F EF+ +++ + + +++L
Sbjct: 22 SLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL 77
Query: 61 KEAFKVFDKDQDGYISPNELRHVM-MNIGEKVTDEELEQMVRE----ADLDGDGQINYEE 115
+ AF+++D D+DGYIS EL V+ M +G + D +L+Q+V + AD DGDG+I++EE
Sbjct: 78 RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEE 137
Query: 116 FARMM 120
F ++
Sbjct: 138 FCAVV 142
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 81/124 (65%), Gaps = 9/124 (7%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
+++EE +++ L QNP ++ +I D +GNG ++F EF+ +++ + + +++L+
Sbjct: 38 LSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLR 93
Query: 62 EAFKVFDKDQDGYISPNELRHVM-MNIGEKVTDEELEQMVRE----ADLDGDGQINYEEF 116
AF+++D D+DGYIS EL V+ M +G + D +L+Q+V + AD DGDG+I++EEF
Sbjct: 94 FAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
Query: 117 ARMM 120
++
Sbjct: 154 CAVV 157
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
IT EEL +K + N E E+ ++ DV+ +GTI++ EF+ + + E ++ L
Sbjct: 44 ITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAATLH-LNKIEREDHLF 102
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
AF FDKD GYI+P+EL+ G V D +E++ R+ D D DG+I+Y EF
Sbjct: 103 AAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQDNDGRIDYNEF 155
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 42 EFLNLMARKMKENEAQEE---LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQ 98
+F R + E+ ++EE LKE F D D+ G I+ EL+ + +G + + E+
Sbjct: 8 KFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILD 67
Query: 99 MVREADLDGDGQINYEEFARMML 121
+ + AD+D G I+Y+EF L
Sbjct: 68 LXQAADVDNSGTIDYKEFIAATL 90
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 81/125 (64%), Gaps = 9/125 (7%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
+++EE +++ L QNP ++ +I D +GNG ++F EF+ +++ + + +++L
Sbjct: 23 SLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL 78
Query: 61 KEAFKVFDKDQDGYISPNELRHVM-MNIGEKVTDEELEQMVRE----ADLDGDGQINYEE 115
+ AF+++D D+DGYIS EL V+ M +G + D +L+Q+V + AD DGDG+I++EE
Sbjct: 79 RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEE 138
Query: 116 FARMM 120
F ++
Sbjct: 139 FCAVV 143
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
IT E L +K M +E D GNG I+F EFL++M R+MK+ +++ L+
Sbjct: 23 ITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILR 82
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
+AF+ FD + GYI L+ ++N+G+++ E + + + + GQI Y+ F M
Sbjct: 83 QAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITETE-KGQIRYDNFINTMF 141
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF++FD ++ G+I+ L+ V+ G +V +M EAD G+G+I + EF
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLS 66
Query: 119 MM 120
MM
Sbjct: 67 MM 68
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENE 55
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+ +
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD 80
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 53/73 (72%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
+KM E + +EE+ +AFK+FD D+ G IS L+ V +GE +TDEEL++M+ EAD DG
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 108 DGQINYEEFARMM 120
DG+++ +EF R+M
Sbjct: 61 DGEVSEQEFLRIM 73
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ + L K L +N T+EEL+ MI E D +G+G + EFL +M +
Sbjct: 28 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 75
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 12 KSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQ 71
+ + + T+EE+ D + G I F L +A+++ EN EEL+E D+D
Sbjct: 2 QKMSEKDTKEEILKAFKLFDDDETGKISFKN-LKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 72 DGYISPNELRHVM 84
DG +S E +M
Sbjct: 61 DGEVSEQEFLRIM 73
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 79
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMIS--EVDVNGNGTIEFGEFLNLMAR--KMKENEAQ 57
I + +++L QNPT E+ ++ + D T++F +FL +M K K+
Sbjct: 26 ILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPMMQTIAKNKDQGCF 85
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
E+ E +VFDK+ +G + E+RHV++ +GEK+T+EE+EQ+V + D +G INYEE
Sbjct: 86 EDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELV 144
Query: 118 RMML 121
RM+L
Sbjct: 145 RMVL 148
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD--GDGQIN 112
E E KEAF++FD+ DG I ++ VM +G+ T+ E+ +++ D +
Sbjct: 6 EQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLK 65
Query: 113 YEEFARMM 120
+E+F MM
Sbjct: 66 FEQFLPMM 73
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMIS--EVDVNGNGTIEFGEFLNLMAR--KMKENEAQ 57
I + +++L QNPT E+ ++ + D T++F +FL +M K K+
Sbjct: 24 ILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPMMQTIAKNKDQGCF 83
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
E+ E +VFDK+ +G + E+RHV++ +GEK+T+EE+EQ+V + D +G INYEE
Sbjct: 84 EDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELV 142
Query: 118 RMML 121
RM+L
Sbjct: 143 RMVL 146
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD--GDGQIN 112
E E KEAF++FD+ DG I ++ VM +G+ T+ E+ +++ D +
Sbjct: 4 EQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLK 63
Query: 113 YEEFARMM 120
+E+F MM
Sbjct: 64 FEQFLPMM 71
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKMK
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
IT +EL ++SL QNPTE EL++MI+EVD +G+GTI+F EFL +MARKMK+
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDT 79
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DGDG I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKM 51
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKM
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 76
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKM 51
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARKM
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 76
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARK
Sbjct: 26 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
IT +EL ++SL QNPTE EL++MI+EVD +GNGTI+F EFL +MARK
Sbjct: 27 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD DG I+ EL VM ++G+ T+ EL+ M+ E D DG+G I++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 119 MM 120
MM
Sbjct: 72 MM 73
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
IT +EL ++SL NPTE EL++MI+EVD +GNGTI+F EFL +MAR MK
Sbjct: 26 TITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMARIMK 77
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF ++DKD DG I+ EL VM ++G T+ EL+ M+ E D DG+G I++ EF
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 119 MM 120
MM
Sbjct: 71 MM 72
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 66/104 (63%), Gaps = 7/104 (6%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
++ ++D +G+G I++ EFL A + +++ + AF+VFD D DG I+ EL HV+
Sbjct: 95 LLDQIDSDGSGNIDYTEFL--AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLF 152
Query: 86 NIGEK--VTDEELEQ---MVREADLDGDGQINYEEFARMMLLPV 124
N ++ +T+ ++ Q M+RE D +GDG+I++ EF+ MM L +
Sbjct: 153 NGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMKLTL 196
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 2 ITIEELAVAIKSLDQ--NPTEE---ELRNMISEVDVNGNGTIEFGEFLNLM 47
IT ELA + + ++ N TE +++ MI EVD NG+G I+F EF +M
Sbjct: 142 ITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMM 192
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 48/65 (73%)
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+ ELKEAF+V DK++ G I + LR ++ ++G+++T++E+E M+ E D DG G ++YEEF
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 117 ARMML 121
+M+
Sbjct: 66 KCLMM 70
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I ++ L +KSL TE+E+ NMI+E D +G+GT+++ EF LM
Sbjct: 24 IKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCLM 69
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EE++EAFKVFD+D +G+IS EL M ++G + ELE +++ D+DGDGQ+++EEF
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 118 RMM 120
++
Sbjct: 96 TLL 98
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMA 48
I+ +EL A++SL P E EL +I +D++G+G ++F EF+ L+
Sbjct: 53 ISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 11 IKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEA--QEELKEAFKVFD 68
+++ QNPT E I+E++ ++ +FL ++ R + EE + F+VFD
Sbjct: 31 LRACGQNPTLAE----ITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFD 86
Query: 69 KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
KD G I ELR+V+ ++GEK+++EE++++++ + DG +NY +F +M+L
Sbjct: 87 KDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNI-GEKVTDEELEQMVREADLDGDGQINYEEF 116
+EL++AF+ FD + DG IS +ELR M + G +V ++E+++R+ DL+GDG++++EEF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 117 ARMM 120
RMM
Sbjct: 67 VRMM 70
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 ITIEELAVAIKSL-DQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ EL A++ L ++ +I +VD+NG+G ++F EF+ +M+R
Sbjct: 24 ISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 72
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 77/125 (61%), Gaps = 7/125 (5%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMI---SEVDVNGNGTIEFGEFLNLM--ARKMKENEA 56
IT+ ++ +++L QNPT E+ ++ S+ ++N I F EFL ++ A K+
Sbjct: 21 ITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAK-KITFEEFLPMLQAAANNKDQGT 79
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E+ E +VFDK+ +G + ELRHV+ +GEK+T+EE+E++++ + D +G INYE F
Sbjct: 80 FEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAF 138
Query: 117 ARMML 121
+ ++
Sbjct: 139 VKHIM 143
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD--GDGQINYEEF 116
+ KEAF +FD+ D I+ +++ ++ +G+ T+ E+ +++ + +I +EEF
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEF 64
Query: 117 ARMM 120
M+
Sbjct: 65 LPML 68
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMIS--EVDVNGNGTIEFGEFLNLMARKMKENEAQ-- 57
I + +++L QNPT E+ ++ + D + ++F FL M + + +N Q
Sbjct: 27 ILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLP-MLQAVAKNRGQGT 85
Query: 58 -EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E+ E F+VFDK+ +G + ELRHV+ +GEK+T+EE+E ++ + D +G INYE F
Sbjct: 86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAF 144
Query: 117 ARMML 121
+ +L
Sbjct: 145 LKHIL 149
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD--GDGQINYEE 115
EE KEAF++FD+ DG I ++ VM +G+ T+ E+ +++ D ++++E
Sbjct: 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 69
Query: 116 FARMM 120
F M+
Sbjct: 70 FLPML 74
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 47/64 (73%)
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
Q+EL+EAF+++DK+ +GYIS + +R ++ + E ++ E+L+ M+ E D DG G +++EEF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 117 ARMM 120
+M
Sbjct: 62 MGVM 65
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 11 IKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMA 48
+ LD+ + E+L MI E+D +G+GT++F EF+ +M
Sbjct: 29 LAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 66
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMI---SEVDVNGNGTIEFGEFLNLM--ARKMKENEA 56
IT ++ ++L QNPT E+ ++ S+ ++N I F EFL ++ A K+
Sbjct: 23 ITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGT 81
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E+ E +VFDK+ +G + ELRHV+ +GEK+T+EE+E++++ + D +G INYE F
Sbjct: 82 FEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAF 140
Query: 117 ARMML 121
+ ++
Sbjct: 141 VKHIM 145
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD--GDGQINY 113
A ++ KEAF +FD+ D I+ +++ + +G+ T+ E+ +++ + I +
Sbjct: 4 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 63
Query: 114 EEFARMM 120
EEF M+
Sbjct: 64 EEFLPML 70
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CI+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F E+L +MAR MK++
Sbjct: 35 CISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMARCMKDD 88
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMM 120
+E+ MM
Sbjct: 75 DEWLVMM 81
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMI---SEVDVNGNGTIEFGEFLNLM--ARKMKENEA 56
IT ++ ++L QNPT E+ ++ S+ ++N I F EFL ++ A K+
Sbjct: 25 ITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGT 83
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E+ E +VFDK+ +G + ELRHV+ +GEK+T+EE+E++++ + D +G INYE F
Sbjct: 84 FEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAF 142
Query: 117 ARMML 121
+ ++
Sbjct: 143 VKHIM 147
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD--GDGQINY 113
A ++ KEAF +FD+ D I+ +++ + +G+ T+ E+ +++ + I +
Sbjct: 6 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 65
Query: 114 EEFARMM 120
EEF M+
Sbjct: 66 EEFLPML 72
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDG 73
LD + E E+ ++ VD + NG IE+ EF+ + A K ++E L+ AF++FD D G
Sbjct: 375 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSG 433
Query: 74 YISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
IS EL + + + V E + ++ E D + DG+++++EF +M+L
Sbjct: 434 KISSTELA-TIFGVSD-VDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLN----LM------ARKMKENEAQEELKEAFKVFDKD 70
+EL + ++D NG+G ++ E + LM A + + + E+ + D D
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD 394
Query: 71 QDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
++GYI +E V M+ ++ E LE+ R D D G+I+ E A +
Sbjct: 395 KNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF 444
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ ELA D + E ++++SEVD N +G ++F EF ++ +
Sbjct: 435 ISSTELATIFGVSDVD--SETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CI+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++
Sbjct: 35 CISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDD 88
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFDKD-QDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F + +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDG 73
LD + E E+ ++ VD + NG IE+ EF+ + A K ++E L+ AF++FD D G
Sbjct: 398 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSG 456
Query: 74 YISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
IS EL + + + V E + ++ E D + DG+++++EF +M+L
Sbjct: 457 KISSTELA-TIFGVSD-VDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLN----LM------ARKMKENEAQEELKEAFKVFDKD 70
+EL + ++D NG+G ++ E + LM A + + + E+ + D D
Sbjct: 358 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD 417
Query: 71 QDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
++GYI +E V M+ ++ E LE+ R D D G+I+ E A +
Sbjct: 418 KNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF 467
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ ELA D + E ++++SEVD N +G ++F EF ++ +
Sbjct: 458 ISSTELATIFGVSDVD--SETWKSVLSEVDKNNDGEVDFDEFQQMLLK 503
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CI+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++
Sbjct: 35 CISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDD 88
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDG 73
LD + E E+ ++ VD + NG IE+ EF+ + A K ++E L+ AF++FD D G
Sbjct: 399 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSG 457
Query: 74 YISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
IS EL + + + V E + ++ E D + DG+++++EF +M+L
Sbjct: 458 KISSTELA-TIFGVSD-VDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 7 LAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLN----LM------ARKMKENEA 56
L + K Q+ T+E L + ++D NG+G ++ E + LM A + +
Sbjct: 346 LYMGSKLTSQDETKE-LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 404
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+ E+ + D D++GYI +E V M+ ++ E LE+ R D D G+I+ E
Sbjct: 405 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 464
Query: 117 ARMM 120
A +
Sbjct: 465 ATIF 468
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ ELA D + E ++++SEVD N +G ++F EF ++ +
Sbjct: 459 ISSTELATIFGVSDVD--SETWKSVLSEVDKNNDGEVDFDEFQQMLLK 504
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 47 MARKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREA 103
M R MK++ + +EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++++
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 60
Query: 104 DLDGDGQINYEEFARMM 120
D + DG+I+Y+EF M
Sbjct: 61 DKNNDGRIDYDEFLEFM 77
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 7 LAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKV 66
+ +K + TEEEL ++ D N +G I+ E L +M + E +++++E K
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE-LKIMLQATGETITEDDIEELMKD 59
Query: 67 FDKDQDGYISPNELRHVMMNI 87
DK+ DG I +E M +
Sbjct: 60 GDKNNDGRIDYDEFLEFMKGV 80
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I +EEL + +++ + TE+++ ++ + D N +G I++ EFL M
Sbjct: 32 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CI+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++
Sbjct: 35 CISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDD 88
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 54 NEAQEELKEAFKVFDKD-QDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
+E + E K AF +F +D +DG IS EL VM +G+ T EEL++M+ E D DG G ++
Sbjct: 14 DEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 113 YEEFARMML 121
++EF MM+
Sbjct: 74 FDEFLVMMV 82
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CI+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++
Sbjct: 35 CISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDD 88
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFDKD-QDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +D +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 11 IKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAFKVFDK 69
+ L NP E++ + G ++ F EFL M E + EAFK FD+
Sbjct: 38 CRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDR 96
Query: 70 DQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
+ G+IS ELRHV+ +GE+++DEE+++++ DL D +G + YEEF + ++
Sbjct: 97 EGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVM 150
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 53 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
E +++EE+ +AF++FD D G I+ +LR V +GE +T+EEL++M+ EAD + D +I+
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 113 YEEFARMM 120
+EF R+M
Sbjct: 64 EDEFIRIM 71
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
ITI++L K L +N TEEEL+ MI+E D N + I+ EF+ +M +
Sbjct: 25 TITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 11 IKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAFKVFDK 69
+ L NP E++ + G ++ F EFL M E + EAFK FD+
Sbjct: 37 CRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDR 95
Query: 70 DQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
+ G+IS ELRHV+ +GE+++DEE+++++ DL D +G + YEEF + ++
Sbjct: 96 EGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVM 149
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAF 64
+L + L NP E++ + G ++ F EFL M E + EAF
Sbjct: 32 KLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAF 90
Query: 65 KVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
K FD++ G+IS ELRHV+ +GE+++DEE+++++ DL D +G + YEEF + ++
Sbjct: 91 KTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVM 149
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMI-SEVDVNGNGTIEFGEFLNLMARKMKENEAQEE 59
I + L ++++ NPT + ++++I ++ + ++ + L+ KE +A +
Sbjct: 20 AIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTK 79
Query: 60 LK-----EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
K +AF+VFDK+ G +S +LR+++ +GEK+TD E++++++ ++D +G+I+Y+
Sbjct: 80 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYK 139
Query: 115 EF 116
+F
Sbjct: 140 KF 141
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 10 AIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDK 69
+ LD + E E+ +++ VD + NG IE+ EF+ + K + ++E L AF+ FD
Sbjct: 350 TVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDS 408
Query: 70 DQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
D G I+ EL + + E V DE Q+++E D + DG++++EEF MM
Sbjct: 409 DGSGKITNEELGR-LFGVTE-VDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFL----NLMARK------MKENEAQEELKEAFKVFDKD 70
+EL + ++D NG+G ++ E + LM K + ++ + E+ + D D
Sbjct: 314 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 373
Query: 71 QDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
++GYI +E V M+ ++ E L ++ D DG G+I EE R+
Sbjct: 374 RNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF 423
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 46 LMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL----RHVMMNIGEKVTD-------E 94
M K+ E +EL + F+ D + DG + EL R +M G+ V+D
Sbjct: 302 FMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA 361
Query: 95 ELEQMVREADLDGDGQINYEEFARMML 121
E++ +++ D D +G I Y EF + +
Sbjct: 362 EVDHILQSVDFDRNGYIEYSEFVTVCM 388
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 49/65 (75%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
++EEL + F++FDK+ DGYI +EL+ ++ GE +T++++E+++++ D + DG+I+Y+E
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 116 FARMM 120
F M
Sbjct: 64 FLEFM 68
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 18 PTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISP 77
+EEEL ++ D N +G I+ E L +M + E +++++E K DK+ DG I
Sbjct: 3 KSEEELSDLFRMFDKNADGYIDLDE-LKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 78 NELRHVMMNI 87
+E M +
Sbjct: 62 DEFLEFMKGV 71
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I ++EL + +++ + TE+++ ++ + D N +G I++ EFL M
Sbjct: 23 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 68
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CI+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F E+L +M R MK++
Sbjct: 35 CISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMVRCMKDD 88
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+E+ MM+
Sbjct: 75 DEWLVMMV 82
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 10 AIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDK 69
+ LD + E E+ +++ VD + NG IE+ EF+ + K + ++E L AF+ FD
Sbjct: 76 TVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDS 134
Query: 70 DQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
D G I+ EL + + E V DE Q+++E D + DG++++EEF MM
Sbjct: 135 DGSGKITNEELGR-LFGVTE-VDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFL----NLMARK------MKENEAQEELKEAFKVFDKD 70
+EL + ++D NG+G ++ E + LM K + ++ + E+ + D D
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 99
Query: 71 QDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
++GYI +E V M+ ++ E L ++ D DG G+I EE R+
Sbjct: 100 RNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF 149
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 46 LMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL----RHVMMNIGEKVTD-------E 94
M K+ E +EL + F+ D + DG + EL R +M G+ V+D
Sbjct: 28 FMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA 87
Query: 95 ELEQMVREADLDGDGQINYEEFARMML 121
E++ +++ D D +G I Y EF + +
Sbjct: 88 EVDHILQSVDFDRNGYIEYSEFVTVCM 114
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAF 64
+L + L NP E++ + G ++ F EFL M E + EAF
Sbjct: 32 KLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAF 90
Query: 65 KVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
K FD++ G+IS ELRHV+ +GE+++DE+++++++ DL D +G + YE+F + ++
Sbjct: 91 KTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAF 64
+L + L NP E++ + G ++ F EFL M E + EAF
Sbjct: 30 KLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAF 88
Query: 65 KVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
K FD++ G+IS ELRHV+ +GE+++DE+++++++ DL D +G + YE+F + ++
Sbjct: 89 KTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 147
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAF 64
+L + L NP E++ + G ++ F EFL M E + EAF
Sbjct: 32 KLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAF 90
Query: 65 KVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
K FD++ G+IS ELRHV+ +GE+++DE+++++++ DL D +G + YE+F + ++
Sbjct: 91 KTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAF 64
+L + L NP E++ + G ++ F EFL M E + EAF
Sbjct: 32 KLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAF 90
Query: 65 KVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
K FD++ G+IS ELRHV+ +GE+++DE+++++++ DL D +G + YE+F + ++
Sbjct: 91 KTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 13 SLDQN---PTEEELRNMISEVDVNGNGTIEFGEFL-NLMARKMKENEAQEELKEAFKVFD 68
SL QN E+++ +++ +D++G+G+IE+ EF+ + + R + ++E ++ AFK+FD
Sbjct: 370 SLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILL--SRERMERAFKMFD 427
Query: 69 KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
KD G IS EL + + EELE ++ + D + DG++++ EF M+
Sbjct: 428 KDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I+ +EL D + EEL ++I +VD N +G ++F EF+ ++
Sbjct: 434 ISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 65/102 (63%), Gaps = 7/102 (6%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
++ ++D +G+G I++ EF+ A ++ +++ + AF+VFD D DG I+ EL H++
Sbjct: 92 LLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILY 149
Query: 86 NIGEK--VTDEE---LEQMVREADLDGDGQINYEEFARMMLL 122
N +K +T + +++M+R+ D + DG+I++ EF+ MM L
Sbjct: 150 NGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMKL 191
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E+LK F V D+D GYI+ +L+ + G K+ + ++ + D DG G+I+Y EF
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEF 109
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 2 ITIEELAVAIKSLDQ--NPTEEEL---RNMISEVDVNGNGTIEFGEFLNLM 47
IT ELA + + ++ N T+ ++ + MI +VD N +G I+F EF +M
Sbjct: 139 ITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM 189
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAF 64
+L + L NP E++ + G ++ F EFL M E + EAF
Sbjct: 29 KLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAF 87
Query: 65 KVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
K FD++ G+IS ELRHV+ +GE+++DE+++++++ DL D +G + YE+F + ++
Sbjct: 88 KTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 146
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK-ENEAQEELKEAF 64
+L + L NP E++ + G ++ F EFL M E + EAF
Sbjct: 29 KLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAF 87
Query: 65 KVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEEFARMML 121
K FD++ G+IS ELRHV+ +GE+++DE+++++++ DL D +G + YE+F + ++
Sbjct: 88 KTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 146
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 48/65 (73%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
++EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++++ D + DG+I+Y+E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 116 FARMM 120
F M
Sbjct: 63 FLEFM 67
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I +EEL + +++ + TE+++ ++ + D N +G I++ EFL M
Sbjct: 22 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 67
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 18 PTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISP 77
+EEEL ++ D N +G I+ E L +M + E +++++E K DK+ DG I
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEE-LKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 60
Query: 78 NELRHVMMNI 87
+E M +
Sbjct: 61 DEFLEFMKGV 70
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 48/65 (73%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
++EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++++ D + DG+I+Y+E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 116 FARMM 120
F M
Sbjct: 65 FLEFM 69
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I +EEL + +++ + TE+++ ++ + D N +G I++ EFL M
Sbjct: 24 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 69
Score = 32.0 bits (71), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 16 QNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYI 75
+ +EEEL ++ D N +G I+ E L +M + E +++++E K DK+ DG I
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEE-LKIMLQATGETITEDDIEELMKDGDKNNDGRI 60
Query: 76 SPNELRHVMMNI 87
+E M +
Sbjct: 61 DYDEFLEFMKGV 72
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 47/65 (72%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
++EEL F++FDK+ DG+I EL ++ GE V +E++E +++++D + DG+I+++E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 116 FARMM 120
F +MM
Sbjct: 68 FLKMM 72
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I IEEL +++ ++ EE++ +++ + D N +G I+F EFL +M
Sbjct: 27 IDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 72
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 16 QNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYI 75
+ +EEEL N D N +G I+ E L + R E+ +E++++ K DK+ DG I
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEE-LGEILRATGEHVIEEDIEDLMKDSDKNNDGRI 63
Query: 76 SPNELRHVM 84
+E +M
Sbjct: 64 DFDEFLKMM 72
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDG 73
LD + E E+ ++ VD + NG IE+ EF+ + A K ++E L+ AF+ FD D G
Sbjct: 375 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV-AXDRKTLLSRERLERAFRXFDSDNSG 433
Query: 74 YISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
IS EL + V E + ++ E D + DG+++++EF + +L
Sbjct: 434 KISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLL 479
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLNLM----------ARKMKENEAQEELKEAFKVFDKD 70
+EL + + D NG+G ++ E + A + + + E+ + D D
Sbjct: 335 KELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFD 394
Query: 71 QDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARM 119
++GYI +E V + ++ E LE+ R D D G+I+ E A +
Sbjct: 395 KNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI 443
Score = 28.9 bits (63), Expect = 0.84, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 50 KMKENEAQEELKEAFKVFDKDQDGYISPNEL----RHVMMNIGEKVT-------DEELEQ 98
K+ + +EL F DK+ DG + EL + + G+ + + E++Q
Sbjct: 327 KLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQ 386
Query: 99 MVREADLDGDGQINYEEF 116
++ D D +G I Y EF
Sbjct: 387 VLDAVDFDKNGYIEYSEF 404
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I +E+L SL + P ++EL M+ E G + F FL L K+ + ++ L+
Sbjct: 33 IGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPEDALR 88
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
AF +FD+D G+I + L+ ++ N+G+ + EE++ + ++A L + Q NY
Sbjct: 89 NAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNY 139
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 48 ARKMKENEAQ-EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLD 106
R++K ++ Q +ELKEAF + D+D+DG+I +L+ + ++G D+EL M++E
Sbjct: 5 PRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC--- 61
Query: 107 GDGQINYEEF 116
GQ+N+ F
Sbjct: 62 -PGQLNFTAF 70
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
I+ +EL ++ L QNPT+EEL +I EVD +G+GTI+F EFL +M R+MKE+
Sbjct: 37 ISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED 89
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 47/65 (72%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
+EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++++ D + DG+I+Y+E
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 116 FARMM 120
F M
Sbjct: 68 FLEFM 72
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 16 QNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYI 75
+ TEEEL ++ D N +G I+ E L +M + E +++++E K DK+ DG I
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEE-LKIMLQATGETITEDDIEELMKDGDKNNDGRI 63
Query: 76 SPNELRHVMMNI 87
+E M +
Sbjct: 64 DYDEFLEFMKGV 75
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
I +EEL + +++ + TE+++ ++ + D N +G I++ EFL M
Sbjct: 27 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 72
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
I+ +EL ++ L QNPT EEL+ MI EVD +G+GT++F EFL +M R MK++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL VM +G+ T EEL++M+ E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 114 EEFARMML 121
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
Query: 19 TEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPN 78
EEE+ N++ EVD + NG IE+ EF+++ K + ++E L+ AF +FD D+ G I+
Sbjct: 397 VEEEVDNILKEVDFDKNGYIEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKE 455
Query: 79 ELRHV--MMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
EL ++ + +I EK ++ ++ EAD + D I+++EF MM
Sbjct: 456 ELANLFGLTSISEKTWND----VLGEADQNKDNMIDFDEFVSMM 495
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 46 LMARKMKENEAQEELKEAFKVFDKDQDGYISPNE-------LRHVMMNIGE-KVTDEELE 97
+ K+ E ++EL + FK DK+ DG + E LR+ +GE K +EE++
Sbjct: 343 FIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVD 402
Query: 98 QMVREADLDGDGQINYEEFARMML 121
+++E D D +G I Y EF + +
Sbjct: 403 NILKEVDFDKNGYIEYSEFISVCM 426
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFL---NLMARKMKE----NEAQEELKEAFKVFDKDQDG 73
+EL ++ ++D NG+G ++ E + N++ E +EE+ K D D++G
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG 414
Query: 74 YISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMMLLP 123
YI +E V M+ ++E L + D D G+I EE A + L
Sbjct: 415 YIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT 464
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E KEAF +FDKD +G IS +EL VM ++G ++ E+ ++ E D+DG+ QI + EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 119 MM 120
+M
Sbjct: 71 LM 72
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
I+ ELA ++SL +P+E E+ ++++E+DV+GN IEF EFL LM+R++K
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK 77
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E++EAF +FD D G I EL+ M +G + EE+++M+ E D DG G I++E
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 115 EFARMM 120
EF MM
Sbjct: 87 EFLTMM 92
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKM 51
I +EL VA+++L P +EE++ MISE+D +G+GTI+F EFL +M KM
Sbjct: 46 TIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKM 96
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 20 EEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNE 79
++E+R D +G+GTI+ E L + R + +EE+K+ DKD G I E
Sbjct: 29 KQEIREAFDLFDTDGSGTIDAKE-LKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEE 87
Query: 80 LRHVM 84
+M
Sbjct: 88 FLTMM 92
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
I+ + L ++ L QNPT+EEL +I EVD +G+GTI+F EFL +M R+MKE+
Sbjct: 37 ISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED 89
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS L VM +G+ T EEL+ ++ E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I+ ++ SL + TE+EL +M++E G I F FL + ++ + ++ +
Sbjct: 74 ISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIV 129
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD + DG L+ + GEK + +E++Q + EA +DG+G I+ ++FA+++
Sbjct: 130 NAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQIL 187
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E KEAF++ D+D+DG+IS N++R ++G T++EL+ MV EA G IN+ F
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMF 111
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 29/52 (55%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEA 56
E L ++ + + +++E+ +SE ++GNG I+ +F ++ + KE A
Sbjct: 145 ETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGAKEEGA 196
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
E K AF +FD D G IS EL VM +G+ T EEL+ ++ E D DG G I++EEF
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 119 MML 121
MM+
Sbjct: 70 MMV 72
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
I+ +EL ++ L QNPT+EEL +I EVD +G+GTI+F EFL +M R+MK
Sbjct: 26 ISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 76
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
I+ +EL ++ L QNPT+ EL +I EVD +G+GTI+F EFL +M R+MKE+
Sbjct: 37 ISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMMVRQMKED 89
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR E E K AF +FD D G IS EL VM +G+ T EL+ ++ E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDG 69
Query: 108 DGQINYEEFARMML 121
G I++EEF MM+
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 46/59 (77%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
E+ +AF+VFDK+ G +S +LR+++ +GEK+TD E++++++ ++D +G+I+Y++F
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 36 GTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI---GEKVT 92
GT ++ F +L+ K K + ++KE F++ DKDQ G+I EL+ V+ G +
Sbjct: 22 GTFDYKRFFHLVGLKGKTDA---QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78
Query: 93 DEELEQMVREADLDGDGQINYEEFARMM 120
D E + ++ D D DG+I +EFA+M+
Sbjct: 79 DTETKALLAAGDSDHDGKIGADEFAKMV 106
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
++ +E+ +K + ++ ++ ++D N +G I + +FL K Q LK
Sbjct: 74 LSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDK------QTYLK 127
Query: 62 E-----AFKVFDKDQDGYISPNELRHVMM--NIGEKVTDEELEQMVREADLDGDGQINYE 114
+ FK FD D +G IS EL+ + +I + D+ ++ +++E DL+GDG+I++
Sbjct: 128 KEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFH 187
Query: 115 EFARMM 120
EF MM
Sbjct: 188 EFMLMM 193
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 44 LNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREA 103
L ++A+ + + E L+ F D D G +S E+ + IG + ++ Q++R+
Sbjct: 44 LTIIAKHLCDVEINN-LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDI 102
Query: 104 DLDGDGQINYEEF 116
D + GQI+Y +F
Sbjct: 103 DSNASGQIHYTDF 115
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 2 ITIEELAVAIKSLD-QNP-TEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I++EEL D +NP ++ + +++ EVD+NG+G I+F EF+ +M++K
Sbjct: 146 ISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKM 51
I ++EL VA+++L P +EE++ MISE+D G G + FG+FL +M +KM
Sbjct: 47 TIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKM 97
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E++EAF +FD D G I EL+ M +G + EE+++M+ E D +G G++N+
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 115 EFARMM 120
+F +M
Sbjct: 88 DFLTVM 93
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEE 115
+EE+ AFKVFD + DG I +E + +M +GE+ +TD E+E+ ++EAD DG+G I+ E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 116 FARMM 120
F ++
Sbjct: 67 FMDLI 71
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 20 EEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNE 79
EEE+ D NG+G I+F EF +M + +E E++EA K D+D +G I E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 80 LRHVM 84
++
Sbjct: 67 FMDLI 71
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 CITIEELAVAIKSLDQNP-TEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I +E ++ + + P T+ E+ + E D +GNG I+ EF++L+ +
Sbjct: 24 VIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 73
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 25 NMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM 84
++ D NG+GTI+F EF+ ++ + + +++LK AF ++D D +GYIS E+ ++
Sbjct: 67 HVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125
Query: 85 MNIGEKVT------------DEELEQMVREADLDGDGQINYEEFAR 118
I + V+ ++ E++ R+ D + DG+++ EEF R
Sbjct: 126 QAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 34/81 (41%)
Query: 35 NGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDE 94
+G + EF + +A + + F+ FD + DG I E + ++
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQ 99
Query: 95 ELEQMVREADLDGDGQINYEE 115
+L+ DLDG+G I+ E
Sbjct: 100 KLKWAFSMYDLDGNGYISKAE 120
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEE- 59
++ EE+ + S E+ L+ + +D++GNG I+ EF A +KE + +E
Sbjct: 16 SVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA-VKEQDLSDEK 74
Query: 60 --LKEAFKVFDKDQDGYISPNELRHVMMNIG-EKVTDEELEQMVREADLDGDGQINYEEF 116
LK +K+ D D DG ++ E+ G EKV D+ + +AD +GDG I EEF
Sbjct: 75 VGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ-----IMKADANGDGYITLEEF 129
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREA-DLDGDGQINYEEFARM 119
FK D + DG +S E++ ++ + +E+L Q++ +A D+DG+G+I+ EF +
Sbjct: 6 FKQLDANGDGSVSYEEVK-AFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I I +L SL + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 19 IDINDLKEEFSSLGRTPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDSEETIR 74
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+D ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y F M+
Sbjct: 75 NAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 132
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D+++DG+I N+L+ ++G D+EL M++EA G +N+ F
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 56
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 49 RKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGD 108
+K+ E Q+E KEAF++FDKD D ++ EL VM +G T +++ ++V++ D D
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 109 GQINYEEFARMML 121
G+ + E F +ML
Sbjct: 65 GKFDQETFLTIML 77
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLM 47
+T EEL +++L NPT++++ ++ + D + +G + FL +M
Sbjct: 31 LTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIM 76
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKEN 54
CI+ +EL + L QNPT EEL+ I EVD +G+GT++F EFL R K++
Sbjct: 35 CISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLVXXVRCXKDD 88
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 55 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINY 113
E + E K AF +F +DG IS EL V +G+ T EEL++ + E D DG G +++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDF 74
Query: 114 EEF 116
+EF
Sbjct: 75 DEF 77
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
++ EE+AV D E E+ ++ D + NG I++ EF+ + A K ++++L+
Sbjct: 375 LSGEEVAV----FDLPQIESEVDAILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLE 429
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF+ FD+D +G IS +EL V + + + ++M+ D + DG +++EEF +M+
Sbjct: 430 SAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 7 LAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEA-------QEE 59
L +A K Q T+E L ++ +D NG+G ++ E ++ ++ E A + E
Sbjct: 333 LYMASKLTSQEETKE-LTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARM 119
+ D D++GYI +E V M+ ++ ++LE ++ D DG+G+I+ +E A +
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 451
Query: 120 MLL 122
L
Sbjct: 452 FGL 454
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 44 LNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI-GEKVT-------DEE 95
L MA K+ E +EL + F+ DK+ DG + EL + GE+V + E
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 96 LEQMVREADLDGDGQINYEEFARMML 121
++ ++ AD D +G I+Y EF + +
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAM 417
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENE 55
I+++ELA ++ LD ++ + MIS +D N +G ++F EF ++ + NE
Sbjct: 443 ISVDELA-SVFGLDHLESKT-WKEMISGIDSNNDGDVDFEEFCKMIQKLCSNNE 494
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
++ EE+AV D E E+ ++ D + NG I++ EF+ + A K ++++L+
Sbjct: 92 LSGEEVAV----FDLPQIESEVDAILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLE 146
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF+ FD+D +G IS +EL V + + + ++M+ D + DG +++EEF +M+
Sbjct: 147 SAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 203
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 7 LAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEA-------QEE 59
L +A K Q T+E L ++ +D NG+G ++ E ++ ++ E A + E
Sbjct: 50 LYMASKLTSQEETKE-LTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 108
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARM 119
+ D D++GYI +E V M+ ++ ++LE ++ D DG+G+I+ +E A +
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 168
Query: 120 MLL 122
L
Sbjct: 169 FGL 171
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQ 57
I+++ELA ++ LD ++ + MIS +D N +G ++F EF ++ + NE Q
Sbjct: 160 ISVDELA-SVFGLDHLESKT-WKEMISGIDSNNDGDVDFEEFCKMIQKLCSNNEPQ 213
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVM-MNIGEKVTDEELE----QMVREADLDGD 108
N + +L AF+++D D+DG IS +E+ V+ + +G +VT+E+LE + V+EAD DGD
Sbjct: 110 NSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGD 169
Query: 109 GQINYEEFARMM 120
G +++ EF + +
Sbjct: 170 GAVSFVEFTKSL 181
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EEL+EAF+ FDKD+DGYI+ +L + M +G T+ EL ++ ++ +++ G +++++F
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 118 RMM 120
+M
Sbjct: 70 ELM 72
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKM 51
I +L ++++ PTE EL + ++++N G ++F +F+ LM K+
Sbjct: 27 INCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKL 76
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
NP +R++IS D + F EF + + + + F+ +D+D G I
Sbjct: 60 NPVT--VRSIISMFDRENKAGVNFSEFTGVW-------KYITDWQNVFRTYDRDNSGMID 110
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
NEL+ + G +++D+ + ++R+ D G GQI +++F
Sbjct: 111 KNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFK 65
EL A+ +++ +I + D G G I F +F+ + L + F+
Sbjct: 113 ELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-------VLQRLTDIFR 165
Query: 66 VFDKDQDGYISPNELRHVMM 85
+D DQDG+I + +++ M
Sbjct: 166 RYDTDQDGWIQVSYEQYLSM 185
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
NP +R++IS D + F EF + + + + F+ +D+D G I
Sbjct: 42 NPVT--VRSIISMFDRENKAGVNFSEFTGVW-------KYITDWQNVFRTYDRDNSGMID 92
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
NEL+ + G +++D+ + ++R+ D G GQI +++F
Sbjct: 93 KNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFK 65
EL A+ +++ +I + D G G I F +F+ + L + F+
Sbjct: 95 ELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-------VLQRLTDIFR 147
Query: 66 VFDKDQDGYISPNELRHVMM 85
+D DQDG+I + +++ M
Sbjct: 148 RYDTDQDGWIQVSYEQYLSM 167
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 1 CITIEELAVAIKSLDQNPTEE-ELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEE 59
I+ EL A+ + P +R++IS D + F EF + + +
Sbjct: 42 VISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW-------KYITD 94
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+ F+ +D+D G I NEL+ + G +++D+ + ++R+ D G GQI +++F
Sbjct: 95 WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFK 65
EL A+ +++ +I + D G G I F +F+ + L + F+
Sbjct: 114 ELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-------VLQRLTDIFR 166
Query: 66 VFDKDQDGYISPNELRHVMM 85
+D DQDG+I + +++ M
Sbjct: 167 RYDTDQDGWIQVSYEQYLSM 186
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMN-IGEKVTDEELEQMVREADLDGDGQINYEE 115
Q L F+ DKD+ G IS NEL+ + N + ++ D + +N+ E
Sbjct: 25 QSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 84
Query: 116 FA 117
F
Sbjct: 85 FT 86
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
NP +R++IS D + F EF + + + + F+ +D+D G I
Sbjct: 39 NPVT--VRSIISMFDRENKAGVNFSEFTGVW-------KYITDWQNVFRTYDRDNSGMID 89
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
NEL+ + G +++D+ + ++R+ D G GQI +++F
Sbjct: 90 KNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFK 65
EL A+ +++ +I + D G G I F +F+ + L + F+
Sbjct: 92 ELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-------VLQRLTDIFR 144
Query: 66 VFDKDQDGYISPNELRHVMM 85
+D DQDG+I + +++ M
Sbjct: 145 RYDTDQDGWIQVSYEQYLSM 164
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
NP +R++IS D + F EF + + + + F+ +D+D G I
Sbjct: 38 NPVT--VRSIISMFDRENKAGVNFSEFTGVW-------KYITDWQNVFRTYDRDNSGMID 88
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
NEL+ + G +++D+ + ++R+ D G GQI +++F
Sbjct: 89 KNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFK 65
EL A+ +++ +I + D G G I F +F+ + L + F+
Sbjct: 91 ELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-------VLQRLTDIFR 143
Query: 66 VFDKDQDGYISPNELRHVMM 85
+D DQDG+I + +++ M
Sbjct: 144 RYDTDQDGWIQVSYEQYLSM 163
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI--GEKV-TDEELEQMVREADLDGDGQ 110
++ +LKE F++ D DQ G+I +EL++ + G +V T E + + AD DGDG+
Sbjct: 37 KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGK 96
Query: 111 INYEEFARMM 120
I EEF M+
Sbjct: 97 IGAEEFQEMV 106
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
NP +R++IS D + F EF + + + + F+ +D+D G I
Sbjct: 42 NPVT--VRSIISMFDRENKAGVNFSEFTGVW-------KYITDWQNVFRTYDRDNSGMID 92
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
NEL+ + G +++D+ + ++R+ D G GQI +++F
Sbjct: 93 KNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+I + D G G I F +F+ + L + F+ +D DQDG+I + +++ M
Sbjct: 115 LIRKFDRQGRGQIAFDDFIQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 167
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I I +L SL + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 36 IDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMFLSIFSDKLSGTDSEETIR 91
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+ ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y F M+
Sbjct: 92 NAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 149
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D+++DG+I N+L+ + ++G D+EL M++EA G +N+ F
Sbjct: 19 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 73
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I I +L SL + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 40 IDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMFLSIFSDKLSGTDSEETIR 95
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+ ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y F M+
Sbjct: 96 NAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 153
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D+++DG+I N+L+ + ++G D+EL M++EA G +N+ F
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 77
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I I +L SL + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 40 IDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMFLSIFSDKLSGTDSEETIR 95
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+ ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y F M+
Sbjct: 96 NAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 153
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D+++DG+I N+L+ + ++G D+EL M++EA G +N+ F
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 77
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 32 VNGNGTIEFGEFLNLMARK-MKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI--- 87
V G+ +F L+ K M N+ +K+ FK D D G+I EL+ V+ +
Sbjct: 19 VKAEGSFNHKKFFALVGLKAMSAND----VKKVFKAIDADASGFIEEEELKFVLKSFAAD 74
Query: 88 GEKVTDEELEQMVREADLDGDGQINYEEF 116
G +TD E + ++ AD DGDG+I +EF
Sbjct: 75 GRDLTDAETKAFLKAADKDGDGKIGIDEF 103
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 18 PTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISP 77
PTE ++M+ E ++ + L +MA KM E EL + F + + I+
Sbjct: 3 PTE---KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITA 59
Query: 78 NELRHVMMNIG-EKVTDEELEQMVREADLDGDGQINYEEFARMML 121
LR +G E ++ E+ + MVRE DLDGDG +N EF +M+
Sbjct: 60 ESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMV 104
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI---GEKVTDEELEQMVREADLDGDGQ 110
+++ +++K+AF V D+D+ G+I +EL+ + N +TD E + + + D DGDG
Sbjct: 37 SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGM 96
Query: 111 INYEEFARMM 120
I +EFA M+
Sbjct: 97 IGVDEFAAMI 106
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
++ E++ + L + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 23 VSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLSGTDSEETIR 78
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+ + ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y +F M+
Sbjct: 79 NAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 136
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D D+DG++S +++ + +G D+EL M++EA G +N+ F
Sbjct: 6 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMF 60
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
++ E++ + L + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 24 VSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLSGTDSEETIR 79
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+ + ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y +F M+
Sbjct: 80 NAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 137
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D D+DG++S +++ + +G D+EL M++EA G +N+ F
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMF 61
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 27/126 (21%)
Query: 11 IKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKE-------------NEAQ 57
++ L NPTE ++ GT + GE A K++E A
Sbjct: 37 LRCLGMNPTEAQVHQH--------GGTKKMGE----KAYKLEEILPIYEEMSSKDTGTAA 84
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL--DGDGQINYEE 115
+E EAFK FD++ G IS E+R+V+ +GE++T+++ + D+ D DG I YE+
Sbjct: 85 DEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYED 144
Query: 116 FARMML 121
+ ++
Sbjct: 145 LMKKVM 150
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
++ E++ + L + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 21 VSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLSGTDSEETIR 76
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+ + ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y +F M+
Sbjct: 77 NAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 134
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D D+DG++S +++ + +G D+EL M++EA G +N+ F
Sbjct: 4 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMF 58
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVM-MNIGEKVTDEEL----EQMVREADLDGD 108
N +L AF+++D D+D IS +EL V+ M +G ++DE+L ++ ++EAD DGD
Sbjct: 109 NSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGD 168
Query: 109 GQINYEEFARMM 120
I++ EF +++
Sbjct: 169 SAISFTEFVKVL 180
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
++ E++ + L + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 35 VSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMFLSIFSDKLSGTDSEETIR 90
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+ + ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y +F M+
Sbjct: 91 NAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 148
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D D+DG++S +++ + +G D+EL M++EA G +N+ F
Sbjct: 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMF 72
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI---GEKVTDEELEQMVREADLDGDGQ 110
+++ +++K+AF + D+D+ G+I +EL+ + N +TD E + ++ D DGDG+
Sbjct: 38 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 97
Query: 111 INYEEFARMM 120
I +EF ++
Sbjct: 98 IGVDEFTALV 107
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
++ E++ + L + P ++EL M+ E G + F FL++ + K+ +++E ++
Sbjct: 24 VSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMFLSIFSDKLSGTDSEETIR 79
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF +FD+ + ++ ++ ++ N+G+ +E+ +EA ++G G+ +Y +F M+
Sbjct: 80 NAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 137
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+E+KEAF + D D+DG++S +++ + +G D+EL M++EA G +N+ F
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMF 61
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Query: 24 RNMISE-----VDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPN 78
RN+ ++ DV NG IEFGEF+ + E++K AFK++D Q G+I
Sbjct: 72 RNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIERE 131
Query: 79 ELRHVMMNI---GEKVTDEEL-----EQMVREADLDGDGQINYEEF 116
EL+ +++ + E V E++ ++ +AD DG+I+ +E+
Sbjct: 132 ELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Query: 24 RNMISE-----VDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPN 78
RN+ ++ DV NG IEFGEF+ + E++K AFK++D Q G+I
Sbjct: 72 RNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIERE 131
Query: 79 ELRHVMMNI---GEKVTDEEL-----EQMVREADLDGDGQINYEEF 116
EL+ +++ + E V E++ ++ +AD DG+I+ +E+
Sbjct: 132 ELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVM-MNIGEKVTDEEL----EQMVREADLDGD 108
N +L AF+++D D+D IS +EL V+ M +G ++DE+L ++ ++EAD DGD
Sbjct: 109 NSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGD 168
Query: 109 GQINYEEFARMM 120
I++ EF +++
Sbjct: 169 SAISFTEFVKVL 180
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
N EEL MI E +G I F FL + K+K + ++ + AFKV D D G I
Sbjct: 40 NVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIK 95
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+ L ++ G + T EE++ M D G ++Y+ ++
Sbjct: 96 KSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 139
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGE-KVTDEELEQMVREADLDGDGQINYEEF 116
E+ KEAF V D++ DG I ++LR +G V +EEL+ M++EA G IN+ F
Sbjct: 7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVF 62
Query: 117 ARMM 120
M
Sbjct: 63 LTMF 66
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 42 EFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTD---EELEQ 98
+F ++ K K + +++K+ F + DKD+DG+I +EL ++ D +E +
Sbjct: 28 KFFQMVGLKKK---SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKT 84
Query: 99 MVREADLDGDGQINYEEFARMM 120
++ D DGDG+I EEF+ ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
M D N +G I+F E++ ++ +K + ++L+ FK++D D +G I EL +++
Sbjct: 57 MFETFDFNKDGYIDFMEYVAALSLVLK-GKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK 115
Query: 86 NI------GEKVTDEELEQMVREA-DLDGDGQINYEEF 116
I E +T EE MV + D++GDG+++ EEF
Sbjct: 116 AIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 10 AIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDK 69
A++ L + + ++E +G + EF K A + +++ F+ FD
Sbjct: 7 AVEELSATECHQWYKKFMTECP---SGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDF 63
Query: 70 DQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQIN 112
++DGYI E + + + D++L + D+DG+G I+
Sbjct: 64 NKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCID 106
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
N EEL MI E +G I F FL + K+K + ++ + AFKV D D G I
Sbjct: 58 NVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIK 113
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
+ L ++ G + T EE++ M D G ++Y+
Sbjct: 114 KSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYK 151
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGE-KVTDEELEQMVREADLDGDGQINYEEF 116
E+ KEAF V D++ DG I ++LR +G V +EEL+ M++EA G IN+ F
Sbjct: 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVF 80
Query: 117 ARMM 120
M
Sbjct: 81 LTMF 84
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
FK FD + DG IS +EL + +G VT +E+ +M+ E D DGDG I+++EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFT 69
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNL 46
I+ EL A+K+L + T +E+R M++E+D +G+G I F EF +
Sbjct: 28 ISSSELGDALKTL-GSVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
K F+ FDK++DG +S +E R V + T E++ + E D+DG+G++N +EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 24/135 (17%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEF---LNLMARKMKENEAQE 58
+ + E K D + + M D NG+ TI+F E+ LNL+ R E++
Sbjct: 40 LFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK--- 96
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNI----------------GEKVTDEE-LEQMVR 101
LK FK++DKD++G I EL ++ +I G+ +T EE ++++
Sbjct: 97 -LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFL 155
Query: 102 EADLDGDGQINYEEF 116
D +GDGQ++ EF
Sbjct: 156 LVDENGDGQLSLNEF 170
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI---GEKVTDEELEQMVREADLDGDGQ 110
+++ +++K+AF + D+D+ G+I +EL+ + N +TD E + ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 111 INYEEFARMM 120
I +E+ ++
Sbjct: 97 IGVDEWTALV 106
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK--------- 52
I EE + + + EE+L D+N +G I F E L ++A K
Sbjct: 80 IHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLN 139
Query: 53 ENEAQEEL--KEAFKVFDKDQDGYISPNELR 81
E+EA E+ K+ FK+ DK++DGYI+ +E R
Sbjct: 140 EDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 20 EEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNE 79
E+ ++ + D + NG I F EF+ +++ + +E+L AF+++D + DGYI+ +E
Sbjct: 62 EDFANHLFTVFDKDNNGFIHFEEFITVLSTTSR-GTLEEKLSWAFELYDLNHDGYITFDE 120
Query: 80 LRHVMMNI----GEKVTDEE--------LEQMVREADLDGDGQINYEEF 116
+ ++ ++ G VT E ++++ + D + DG I +EF
Sbjct: 121 MLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELR---HVMMNIGEKVTDEELEQMVREADLDGDGQI 111
++ +++K+AF V D+D+ G+I +EL+ V +TD E + ++ D DGDG I
Sbjct: 39 KSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAI 98
Query: 112 NYEEFARMM 120
+E+A ++
Sbjct: 99 GVDEWAALV 107
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 49 RKMKENEAQEE---LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADL 105
+ M E ++EE LKE FK+ D D G I+ +EL+ + +G ++ + E++ ++ AD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 106 DGDGQINYEEF 116
D G I+Y EF
Sbjct: 71 DKSGTIDYGEF 81
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFL 44
IT +EL +K + E E+++++ D++ +GTI++GEF+
Sbjct: 39 TITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFI 82
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
N EEL MI E +G I F FL + K+K + ++ + AFKV D D G I
Sbjct: 45 NVKNEELDAMIKE----ASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIK 100
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+ L ++ ++ T EE++ M D G ++Y+ ++
Sbjct: 101 KSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 144
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGE-KVTDEELEQMVREADLDGDGQINYEEF 116
++ KEAF V D+++DG I ++LR +G V +EEL+ M++EA G IN+ F
Sbjct: 12 QDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVF 67
Query: 117 ARMM 120
M
Sbjct: 68 LTMF 71
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYE 114
E ++E+KEAF +FD ++ G I +EL+ M +G V E+ +++ E D +G+G I ++
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 115 EFARMM 120
+F +M
Sbjct: 64 DFLDIM 69
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
I EL VA+++L + + E+ +++E D GNG I F +FL++M K+K
Sbjct: 23 SIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEKIK 74
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 20 EEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNE 79
++E++ D N G+I++ E L + R + + + E+ E +D++ +GYI ++
Sbjct: 6 KQEIKEAFDLFDTNKTGSIDYHE-LKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDD 64
Query: 80 LRHVM 84
+M
Sbjct: 65 FLDIM 69
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 42 EFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTD---EELEQ 98
+F ++ K K + +++K+ F + DKD+ G+I +EL ++ D +E +
Sbjct: 28 KFFQMVGLKKK---SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKT 84
Query: 99 MVREADLDGDGQINYEEFARMM 120
++ D DGDG+I EEF+ ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+ E + FK FD + DG IS EL + +G +T +E++ M+ E D DGDG I+++EF
Sbjct: 8 KAERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEF 66
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNL 46
I+ EL A+K+L + T +E+++M++E+D +G+G I F EF +
Sbjct: 26 ISAAELGEALKTL-GSITPDEVKHMMAEIDTDGDGFISFQEFTDF 69
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 15 DQNPTEEELRNMI-SEVDVNGNGTI---EFGEFLNLMARKMKENEAQEELKEAFKVFDKD 70
D +P ++ R I D NG+G I E GE L + + +E+K D D
Sbjct: 2 DDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLG-----SITPDEVKHMMAEIDTD 56
Query: 71 QDGYISPNEL 80
DG+IS E
Sbjct: 57 GDGFISFQEF 66
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
++++ FK FD + DG IS +EL + +G D E+++M+ E D DGDG I++ EF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 60
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I++ EL A+++L + + +E++ M++E+D +G+G I+F EF++ N +K
Sbjct: 20 ISLSELTDALRTL-GSTSADEVQRMMAEIDTDGDGFIDFNEFISFC------NANPGLMK 72
Query: 62 EAFKVF 67
+ KVF
Sbjct: 73 DVAKVF 78
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 58 EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
++++ FK FD + DG IS +EL + +G D E+++M+ E D DGDG I++ EF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 59
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELK 61
I++ EL A+++L + + +E++ M++E+D +G+G I+F EF++ N +K
Sbjct: 19 ISLSELTDALRTL-GSTSADEVQRMMAEIDTDGDGFIDFNEFISFC------NANPGLMK 71
Query: 62 EAFKVF 67
+ KVF
Sbjct: 72 DVAKVF 77
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYIS 76
NP +R++IS D + F EF + + + + F+ +D+D G I
Sbjct: 39 NPVT--VRSIISMFDRENKAGVNFSEFTGVW-------KYITDWQNVFRTYDRDNSGMID 89
Query: 77 PNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
NEL+ + G +++D+ + ++R+ D G GQI +++F
Sbjct: 90 KNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+I + D G G I F +F+ + L + F+ +D DQDG+I + +++ M
Sbjct: 110 LIRKFDRQGRGQIAFDDFIQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 162
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
I++ EL A+ S + ++ D N +G I F EF +L + +
Sbjct: 43 AISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDL-------HHFILSM 95
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+E F+ D DG + NE+R +++ G +V+++ + ++R+ D G + ++++ +
Sbjct: 96 REGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELS 155
Query: 121 LL 122
+
Sbjct: 156 IF 157
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 48 ARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
AR M +N+ EL E F+ D D G IS EL + + G + E+++ D +
Sbjct: 20 ARHMNDNQ---ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNH 76
Query: 108 DGQINYEEF 116
G+I ++EF
Sbjct: 77 SGEITFDEF 85
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 42 EFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTD---EELEQ 98
+F ++ K K + +++K+ F + DKD+ G+I +EL ++ D +E +
Sbjct: 28 KFFQMVGLKKK---SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKT 84
Query: 99 MVREADLDGDGQINYEEFARMM 120
++ D DGDG+I EEF+ ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNI---GEKVTDEELEQMVREADLDGDGQINYEE 115
++K+ F+ D DQ GY+ +EL++ + ++T+ E + ++ AD DGDG+I +E
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
Query: 116 FARMM 120
F M+
Sbjct: 102 FQEMV 106
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 9 VAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFD 68
+ ++ L+Q + + + + D N +G ++F EF+ + M+E + +++LK FK++D
Sbjct: 46 LGLQGLNQK-ANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQE-KMEQKLKWYFKLYD 103
Query: 69 KDQDGYISPNELRHVMM-----NIGEKVTDEELEQMV-READLDGDGQINYEEFARMM 120
D +G I NEL + M N + ++ EE +V + D++ DG++ EEF M
Sbjct: 104 ADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGM 161
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 42 EFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVR 101
EF L+ + +A + + + + FD ++DG++ E + I ++ +++L+ +
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 102 EADLDGDGQINYEEFARMML 121
D DG+G I+ E M +
Sbjct: 101 LYDADGNGSIDKNELLDMFM 120
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 50 KMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI---GEKVTDEELEQMVREADLD 106
KM N+ +K+ F+ D DQ GY+ EL+ + ++T+ E + ++ AD D
Sbjct: 38 KMSANQ----VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADND 93
Query: 107 GDGQINYEEFARMM 120
GDG+I EEF M+
Sbjct: 94 GDGKIGAEEFQEMV 107
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 15/123 (12%)
Query: 9 VAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKE--AFKV 66
+++ L NP +E + + S ++ F +FL+L++ + + A ++K AF++
Sbjct: 51 LSLPELKANPFKERICRVFSTS--PAKDSLSFEDFLDLLS--VFSDTATPDIKSHYAFRI 106
Query: 67 FDKDQDGYISPNEL-RHVMMNIGE----KVTDEELEQMV----READLDGDGQINYEEFA 117
FD D DG ++ +L R V GE +++ E++Q++ E+D+D DG IN EF
Sbjct: 107 FDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ 166
Query: 118 RMM 120
++
Sbjct: 167 HVI 169
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 25 NMISEVDVNGNGTIEFGEFLNLMARK 50
N++ E D++ +GTI EF ++++R
Sbjct: 147 NILEESDIDRDGTINLSEFQHVISRS 172
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 46 LMARKMKENEAQEELKEAFKVFDKDQDGYISPNELR---HVMMNIGEKVTDEELEQMVRE 102
A+ ++ +++K+AF D+D+ G+I +EL+ V +TD E + ++
Sbjct: 30 FFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKA 89
Query: 103 ADLDGDGQINYEEFARMM 120
D DGDG I EE+ ++
Sbjct: 90 GDSDGDGAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 46 LMARKMKENEAQEELKEAFKVFDKDQDGYISPNELR---HVMMNIGEKVTDEELEQMVRE 102
A+ ++ +++K+AF D+D+ G+I +EL+ V +TD E + ++
Sbjct: 29 FFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKA 88
Query: 103 ADLDGDGQINYEEFARMM 120
D DGDG I EE+ ++
Sbjct: 89 GDSDGDGAIGVEEWVALV 106
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTD---EELEQMVREADLDGDGQI 111
++ +++K+ F + DKD+ G+I +EL ++ D +E + ++ D DGDG+I
Sbjct: 2 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKI 61
Query: 112 NYEEFARMM 120
EEF+ ++
Sbjct: 62 GVEEFSTLV 70
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
C+T +A K + E R M+S +D + +GT+ F EF L A
Sbjct: 57 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWA-------VLNGW 105
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
++ F FD D+ G + P EL+ + +G +++ + + + + +G+I ++++
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDY 159
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 55 EAQEELKEAFKVFD-KDQD-GYISPNELRHVMMNIGEKVTD--EELEQMVREADLDGDGQ 110
++ EE+K AF+VF K+ D IS EL+ VM +G + L++M+ E D +GDG+
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 111 INYEEFARMM 120
+++EEF MM
Sbjct: 62 VSFEEFLVMM 71
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 2 ITIEELAVAIKSLDQNPTE--EELRNMISEVDVNGNGTIEFGEFLNLMAR 49
I+ EEL + +++L + + L MI EVD NG+G + F EFL +M +
Sbjct: 24 ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 15/123 (12%)
Query: 9 VAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKE--AFKV 66
+++ L NP +E + + S ++ F +FL+L++ + + A ++K AF++
Sbjct: 82 LSLPELKANPFKERICRVFSTS--PAKDSLSFEDFLDLLS--VFSDTATPDIKSHYAFRI 137
Query: 67 FDKDQDGYISPNEL-RHVMMNIGE----KVTDEELEQMV----READLDGDGQINYEEFA 117
FD D DG ++ +L R V GE +++ E++Q++ E+D+D DG IN EF
Sbjct: 138 FDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ 197
Query: 118 RMM 120
++
Sbjct: 198 HVI 200
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 25 NMISEVDVNGNGTIEFGEFLNLMARK 50
N++ E D++ +GTI EF ++++R
Sbjct: 178 NILEESDIDRDGTINLSEFQHVISRS 203
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 31 DVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEK 90
D N +G IEF EF+ ++ + E+L+ AFK++D D DGYI+ NE+ ++ I +
Sbjct: 73 DENKDGRIEFSEFIQALSVTSR-GTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM 131
Query: 91 V------------TDEELEQMVREADLDGDGQINYEEF 116
V ++ ++++ D + DG++ +EF
Sbjct: 132 VGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
F VFD+++DG I +E + DE+L + DLD DG I E
Sbjct: 69 FNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE 120
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI---GEKVTDEELEQMVREADLDGDGQ 110
+++ +++K+AF + +D+ G+I +EL+ + N +TD E + ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 111 INYEEFARMM 120
I +E+ ++
Sbjct: 97 IGVDEWTALV 106
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 53 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEK---VTDEELEQMVREADLDGDG 109
++ +++K+ F + D+D+ G+I EL+ + N +T E + + D DGDG
Sbjct: 36 SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 95
Query: 110 QINYEEFARMM 120
+I EEF ++
Sbjct: 96 KIGVEEFQSLV 106
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 53 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEK---VTDEELEQMVREADLDGDG 109
++ +++K+ F + D+D+ G+I EL+ + N +T E + + D DGDG
Sbjct: 37 SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 96
Query: 110 QINYEEFARMM 120
+I EEF ++
Sbjct: 97 KIGVEEFQSLV 107
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 26 MISEVDVNGNGTIEFGEF---LNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL-- 80
+ + D +GNG I F +F L+++ R E+LK AF ++D ++DG I+ E+
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLR----GTVHEKLKWAFNLYDINKDGCITKEEMLA 189
Query: 81 ----------RHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
RH + E E +E+ ++ D + DG + +EF
Sbjct: 190 IMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+ E+DVNG+G + + E +++K + + ++ L+ FK D D +G I NE
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 86 NI-GEKVTDEE--LEQMVREADLDGDGQINYEE 115
+I G+ ++D++ L+ + + D+DGDG++ EE
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEE- 59
++ EE+ + E+ L+ + +D +GNG I+ EF ++ + ++
Sbjct: 16 AVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI 75
Query: 60 -LKEAFKVFDKDQDGYISPNELRHVMMNIG-EKVTDEELEQMVREADLDGDGQINYEEFA 117
LK +K+ D D DG ++ E+ G EKV ++ V +AD +GDG I EEF
Sbjct: 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ-----VMKADANGDGYITLEEFL 130
Query: 118 RMML 121
L
Sbjct: 131 EFSL 134
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMV-READLDGDGQINYEEFARM 119
FK D + DG +S E++ ++ + +E+L Q++ + D DG+G+I+ EFA+
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 97 EQMVREADLDGDGQINYEE 115
E + +E D++GDG ++YEE
Sbjct: 3 EALFKEIDVNGDGAVSYEE 21
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+ E+DVNG+G + + E +++K + + ++ L+ FK D D +G I NE
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 86 NI-GEKVTDEE--LEQMVREADLDGDGQINYEE 115
+I G+ ++D++ L+ + + D+DGDG++ EE
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEE- 59
++ EE+ + E+ L+ + +D +GNG I+ EF ++ + ++
Sbjct: 16 AVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI 75
Query: 60 -LKEAFKVFDKDQDGYISPNELRHVMMNIG-EKVTDEELEQMVREADLDGDGQINYEEFA 117
LK +K+ D D DG ++ E+ G EKV ++ V +AD +GDG I EEF
Sbjct: 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ-----VMKADANGDGYITLEEFL 130
Query: 118 RMML 121
L
Sbjct: 131 EFSL 134
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMV-READLDGDGQINYEEFARM 119
FK D + DG +S E++ ++ + +E+L Q++ + D DG+G+I+ EFA+
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 97 EQMVREADLDGDGQINYEE 115
E + +E D++GDG ++YEE
Sbjct: 3 EALFKEIDVNGDGAVSYEE 21
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
C+T +A K + E R M+S +D + +GT+ F EF L A
Sbjct: 26 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWA-------VLNGW 74
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
++ F FD D+ G + P EL+ + +G ++ + + + + G+I ++++
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYST--SGKITFDDY 128
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 54 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI---GEKVTDEELEQMVREADLDGDGQ 110
+++ +++K+AF + +D+ G+I +EL+ + N +TD E + ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 111 INYEEFARMM 120
I +++ ++
Sbjct: 97 IGVDDWTALV 106
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAF 64
E+ + S+ N E E ++S VD N G + F F++ M+R+ + + +++ +F
Sbjct: 745 EDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASF 804
Query: 65 KVFDKDQDGYISPNELR 81
K+ D++ YI+ +ELR
Sbjct: 805 KILAGDKN-YITVDELR 820
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 42 EFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTD---EELEQ 98
+F ++ K K + +++K+ F + DKD+ G+I +EL ++ D +E +
Sbjct: 28 KFFQMVGLKKK---SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKT 84
Query: 99 MVREADLDGDGQINYEEFARMM 120
++ D DG G+I EEF+ ++
Sbjct: 85 LMAAGDKDGSGKIEVEEFSTLV 106
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEEL 60
C+T +A K + E R M+S +D + +GT+ F EF L A
Sbjct: 57 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWA-------VLNGW 105
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
++ F D D+ G + P EL+ + +G +++ + + + + +G+I ++++
Sbjct: 106 RQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDY 159
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEE-LKEAFKVFDKDQD 72
LDQ E R D NG+GT++ EFL + M ++A+E + AF D+ D
Sbjct: 70 LDQAEAEGVCRKW----DRNGSGTLDLEEFLRALRPPM--SQAREAVIAAAFAKLDRSGD 123
Query: 73 GYISPNELR-------HVMMNIGEKVTDEELEQMVREAD-LDGDGQINYEEF 116
G ++ ++LR H + GE DE L + + D + DGQ+ EF
Sbjct: 124 GVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEF 175
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARM 119
L F+ D+D + +E R + +G + E E + R+ D +G G ++ EEF R
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 120 MLLPV 124
+ P+
Sbjct: 99 LRPPM 103
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 31 DVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM------ 84
D NG + F EF ++ +++ +F+++D Q G+I E++ ++
Sbjct: 95 DTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAE 154
Query: 85 --MNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
MN+ + V ++ +++ EAD DG+I+ EE+ ++L
Sbjct: 155 SGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 193
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 31 DVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM------ 84
D NG + F EF ++ +++ +F+++D Q G+I E++ ++
Sbjct: 64 DTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAE 123
Query: 85 --MNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
MN+ + V ++ +++ EAD DG+I+ EE+ ++L
Sbjct: 124 SGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 42 EFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTD---EELEQ 98
+F ++ K K + +++K+ F + DKD+ G+I +EL ++ D +E +
Sbjct: 29 KFFQMVGLKKK---SADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKM 85
Query: 99 MVREADLDGDGQINYEEFARMM 120
++ D DGDG+I +EF+ ++
Sbjct: 86 LMAAGDKDGDGKIGVDEFSTLV 107
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+ + D + NG + F +F+ ++ ++ QE+L AF ++D ++DGYI+ E+ +M
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLR-GTVQEKLNWAFNLYDINKDGYITKEEMLDIMK 165
Query: 86 NI------------GEKVTDEELEQMVREADLDGDGQINYEEF 116
I E + +E ++ D + DG + +EF
Sbjct: 166 AIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMN------IGEKVTDEELEQMVREADLDGDGQ 110
+ EL+ AFK D + DGY++ EL+ M+ + + E ++++ AD + DG+
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 111 INYEEF 116
I+ EEF
Sbjct: 66 ISKEEF 71
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 18 PTEEELRNMISEVDVNGNGTIEFGEFLNLMA-----RKMKENEAQEELKEAFKVFDKDQD 72
+ EL ++D NG+G + E M + + +++ +E + K+ DK+ D
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSD 63
Query: 73 GYISPNEL 80
G IS E
Sbjct: 64 GKISKEEF 71
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
F + DKDQ+G IS +E + + G + E+ E+ R D+D GQ++ +E R L
Sbjct: 115 FDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 8 AVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVF 67
+V IK D N + L D+N G I + EF+ R +N LK AF
Sbjct: 67 SVGIKKWDINRILQAL-------DINDRGNITYTEFMAGCYRW--KNIESTFLKAAFNKI 117
Query: 68 DKDQDGYISPNEL 80
DKD+DGYIS +++
Sbjct: 118 DKDEDGYISKSDI 130
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
F +FDKD G IS +E + G +DE+ E+ + DLD G+++ +E R L
Sbjct: 122 FDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHL 179
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGT-----IEFGEFLNLMA-------RKMKENEA---QE 58
L+ P + + + E G G I F +FL+ +K NE +E
Sbjct: 54 LEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIRE 113
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
F +FDKD G I+ +E + G + E+ E R DLD G ++ +E R
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
Query: 119 MML 121
L
Sbjct: 174 QHL 176
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGT-----IEFGEFLNLMA-------RKMKENEA---QE 58
L+ P + + + E G G I F +FL+ +K NE +E
Sbjct: 54 LEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIRE 113
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
F +FDKD G I+ +E + G + E+ E R DLD G ++ +E R
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
Query: 119 MML 121
L
Sbjct: 174 QHL 176
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGT-----IEFGEFLNLMA-------RKMKENEA---QE 58
L+ P + + + E G G I F +FL+ +K NE +E
Sbjct: 54 LEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGFKQLATSELKKWARNEPTLIRE 113
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
F +FDKD G I+ +E + G + E+ E R DLD G ++ +E R
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
Query: 119 MML 121
L
Sbjct: 174 QHL 176
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 2 ITIEELAVA-----IKSLDQNPTEEELRNMISEVDVNGNGT-----IEFGEFL------- 44
IT++E+ K+L P + + E G G +F EFL
Sbjct: 37 ITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFFRGCGLEYGKETKFPEFLEGWKNLA 96
Query: 45 NLMARKMKENEA---QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVR 101
N K NE +E F +FDKD G I+ +E + G ++E+ E+ +
Sbjct: 97 NADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQ 156
Query: 102 EADLDGDGQINYEEFARMML 121
DLD G+++ +E R L
Sbjct: 157 HCDLDNSGELDVDEMTRQHL 176
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGT-----IEFGEFLNLMA-------RKMKENEA---QE 58
L+ P + + + E G G I F +FL+ +K NE +E
Sbjct: 54 LEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIRE 113
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
F +FDKD G I+ +E + G + E+ E R DLD G ++ +E R
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTR 173
Query: 119 MML 121
L
Sbjct: 174 QHL 176
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGT-----IEFGEFLNLMA-------RKMKENEA---QE 58
L+ P + + + E G G I F +FL+ +K NE +E
Sbjct: 54 LEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIRE 113
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
F +FDKD G I+ +E + G + E+ E R DLD G ++ +E R
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTR 173
Query: 119 MML 121
L
Sbjct: 174 QHL 176
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+ D D+DGY+S E + + +G +TD++ D + +GQI+ +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
+ D D+DGY+S E + + +G +TD++ D + +GQI+ +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFK 65
+L +A S D E+++R++ + ++ + ++L + + + + EEL + F
Sbjct: 24 KLGLAPSSTD----EKKIRDLYGD-------SLTYEQYLEYLTXCVHDRDNXEELIKXFS 72
Query: 66 VFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
FD + G+++ N+ ++++ G+ +T++E + + +INY+ F +L
Sbjct: 73 HFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNA--FSSEDRINYKLFCEDIL 126
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 56 AQEELKEAFKVFDKDQDGYISPNEL------------RHVMMNIGEKVTDEELEQMVREA 103
E+LK AF ++D ++DGYI+ E+ RH + E E +E+ +
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKM 66
Query: 104 DLDGDGQINYEEF 116
D + DG + EEF
Sbjct: 67 DRNQDGVVTIEEF 79
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
F + DKDQ+G I+ +E + G + E+ E+ R D+D GQ++ +E R L
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
F + DKDQ+G I+ +E + G + E+ E+ R D+D GQ++ +E R L
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTRQHL 172
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL 80
E R MI+ +D + G + F F L A A KE F D+D G + +EL
Sbjct: 40 ETCRIMIAMLDRDHTGKMGFNAFKELWA-------ALNAWKENFMTVDQDGSGTVEHHEL 92
Query: 81 RHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
R + +G +++ + L +V+ +G+I ++++
Sbjct: 93 RQAIGLMGYRLSPQTLTTIVKR--YSKNGRIFFDDY 126
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL 80
E R MI+ +D + G + F F L A A KE F D+D G + +EL
Sbjct: 40 ETCRIMIAMLDRDHTGKMGFNAFKELWA-------ALNAWKENFMTVDQDGSGTVEHHEL 92
Query: 81 RHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
R + +G +++ + L +V+ +G+I ++++
Sbjct: 93 RQAIGLMGYRLSPQTLTTIVKR--YSKNGRIFFDDY 126
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 30 VDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNI-- 87
D + NG I+F EF+ ++ + E ++L AF+++D D +G IS +E+ ++ I
Sbjct: 72 FDADKNGYIDFKEFICALSVTSR-GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130
Query: 88 ----------GEKVTDEELEQMVREADLDGDGQINYEEFA 117
E ++ + ++ D + DGQ+ EEF
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 63 AFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
F VFD D++GYI E + +++L + DLD +G I+Y+E R++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 55 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNIG 88
+++EEL AF++FDK+ DGYI EL ++ G
Sbjct: 2 KSEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 17/136 (12%)
Query: 4 IEELAVAIK--SLDQNPTEEELRNMISEVDVNGNGTIEFGEFLN-----LMARKMKENEA 56
I+EL A K L+ +P + + + D G +E L L+ + ++ ++
Sbjct: 42 IQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKS 101
Query: 57 QEELKEAFKVFDKDQDGYISPNELRHVMMNIGEK----VTDEELEQ----MVREADLDGD 108
EE + ++ +D D G+I EL++ + ++ EK V D +L + M++ D + D
Sbjct: 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNND 161
Query: 109 GQINYEEFARMMLLPV 124
G++ E AR LLPV
Sbjct: 162 GKLELTEMAR--LLPV 175
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 7 LAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENE----------- 55
L A K++D E M+ D N +G +E E MAR + E
Sbjct: 133 LEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTE----MARLLPVQENFLLKFQGIKM 188
Query: 56 AQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEK 90
+E +AF+++D+D +GYI NEL ++ ++ EK
Sbjct: 189 CGKEFNKAFELYDQDGNGYIDENELDALLKDLCEK 223
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 62 EAFKV----FDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
EAFKV FD + +G I L+ ++ +G T EL++++RE + +Y +F
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFL 107
Query: 118 RMML 121
RMML
Sbjct: 108 RMML 111
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL 80
E R+M++ +D +GNG + EF N++ +++ F+ FD D+ G +S E+
Sbjct: 577 ESCRSMVNLMDRDGNGKLGLVEF-NILWNRIR------NYLTIFRKFDLDKSGSMSAYEM 629
Query: 81 RHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
R + G K+ +L Q++ D + I+++ F R ++
Sbjct: 630 RMAIEAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLV 669
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 14 LDQNPTEEELRNMI-SEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQD 72
L+ TEEEL + S + +G I EF + ++ E + + + F+ FD + D
Sbjct: 19 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 78
Query: 73 GYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
G + E + T+++LE D+DG+G I+ E
Sbjct: 79 GTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 121
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
+ +E +A+ T ++L S DV+GNGTI E L ++ K
Sbjct: 80 TLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK 131
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 14 LDQNPTEEELRNMI-SEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQD 72
L+ TEEEL + S + +G I EF + ++ E + + + F+ FD + D
Sbjct: 18 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 77
Query: 73 GYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
G + E + T+++LE D+DG+G I+ E
Sbjct: 78 GTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
+ +E +A+ T ++L S DV+GNGTI E L ++ K
Sbjct: 79 TLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK 130
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 14 LDQNPTEEELRNMI-SEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQD 72
L+ TEEEL + S + +G I EF + ++ E + + + F+ FD + D
Sbjct: 18 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 77
Query: 73 GYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
G + E + T+++LE D+DG+G I+ E
Sbjct: 78 GTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
+ +E +A+ T ++L S DV+GNGTI E L ++ K
Sbjct: 79 TLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK 130
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 14 LDQNPTEEELRNMI-SEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQD 72
L+ TEEEL + S + +G I EF + ++ E + + + F+ FD + D
Sbjct: 18 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 77
Query: 73 GYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
G + E + T+++LE D+DG+G I+ E
Sbjct: 78 GTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
+ +E +A+ T ++L S DV+GNGTI E L ++ K
Sbjct: 79 TLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK 130
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 36/58 (62%)
Query: 38 IEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEE 95
+ + ++L ++ + + + EEL + F FD + GY++ +++++++ G+ +TD+E
Sbjct: 64 LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARM 119
L+ F D ++ G + E R + + +V + E + + D D DG I ++EFAR
Sbjct: 29 LRSVFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAITFQEFARG 86
Query: 120 ML 121
L
Sbjct: 87 FL 88
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 14 LDQNPTEEELRNMI-SEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQD 72
L+ TEEEL + S + +G I EF + ++ E + + + F+ FD + D
Sbjct: 18 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 77
Query: 73 GYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
G + + + T+++LE D+DG+G I+ E
Sbjct: 78 GTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
+ ++ +A+ T ++L S DV+GNGTI E L ++ K
Sbjct: 79 TLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK 130
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 14 LDQNPTEEELRNMI-SEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQD 72
L+ TEEEL + S + +G I EF + ++ E + + + F+ FD + D
Sbjct: 18 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 77
Query: 73 GYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEE 115
G + + + T+++LE D+DG+G I+ E
Sbjct: 78 GTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK 52
+ ++ +A+ T ++L S DV+GNGTI E L ++ K
Sbjct: 79 TLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK 130
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/103 (19%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+ + D G+++F +F+ ++ ++ E+L+ F ++D ++DGYI+ E+ ++
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 116
Query: 86 NI------------GEKVTDEELEQMVREADLDGDGQINYEEF 116
I E + ++ ++ D + DG + +EF
Sbjct: 117 AIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+ + D G+++F +F+ ++ ++ E+L+ F ++D ++DGYI+ E MM
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEE----MM 148
Query: 86 NIGEKVTD 93
+I + + D
Sbjct: 149 DIVKAIYD 156
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+ + D G+++F +F+ ++ ++ E+L+ F ++D ++DGYI+ E MM
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEE----MM 112
Query: 86 NIGEKVTD 93
+I + + D
Sbjct: 113 DIVKAIYD 120
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+ + D G+++F +F+ ++ ++ E+L+ F ++D ++DGYI+ E MM
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEE----MM 115
Query: 86 NIGEKVTD 93
+I + + D
Sbjct: 116 DIVKAIYD 123
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 26/30 (86%)
Query: 91 VTDEELEQMVREADLDGDGQINYEEFARMM 120
VT+E++E +++++D + DG+I+++EF +MM
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 19 TEEELRNMISEVDVNGNGTIEFGEFLNLM 47
TEE++ +++ + D N +G I+F EFL +M
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 64 FKVFDKDQDGYISPNEL----RHVMMNI--GEKVTDEELEQMVRE----ADLDGDGQINY 113
++ FD D +GYI EL RH + + +K+TDE ++Q+ + D DG++
Sbjct: 17 WQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRLQI 76
Query: 114 EEFARMML 121
EE A +L
Sbjct: 77 EELANXIL 84
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
Query: 24 RNMISEVDVNGNGTIEFGEFLN----------LMARKMKENEAQEELKEAFKVFDKDQDG 73
++ S D +G ++ E N L+ R+ + E + ++ +D D G
Sbjct: 60 KSFXSAYDATFDGRLQIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSG 119
Query: 74 YISPNELRHVMMN--------IGEKVTDEELEQMVREADLDGDGQINYEEFARMMLL 122
YIS EL++ + + I DE + + D + DG+++ + AR++ L
Sbjct: 120 YISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLDLNDLARILAL 176
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 22 ELRNMISEVDVNGNGTIEFGEFLNLMA-------RKMKENEAQEELKEAFKVFDKDQDGY 74
E + + D + +G I E N + +K+ N+ E K+FDK++DG
Sbjct: 105 EFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGR 164
Query: 75 ISPNELRHVM 84
+ N+L ++
Sbjct: 165 LDLNDLARIL 174
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARM 119
KE + FD + +G I L+ +M +G T E+++M+ E I+Y +F M
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 120 ML 121
ML
Sbjct: 112 ML 113
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 19 TEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
T E++ MISEV + TI + +F+N+M K
Sbjct: 84 THLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARM 119
KE + FD + +G I L+ +M +G T E+++M+ E I+Y +F M
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 120 ML 121
ML
Sbjct: 112 ML 113
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I + L ++ L T E++ MISEV + TI + +F+N+M K
Sbjct: 67 IDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 32.0 bits (71), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
+ + F D+D+ G + NEL G +++ + +M+R D D +G I++ EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMA 111
Query: 119 M 119
M
Sbjct: 112 M 112
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 32.0 bits (71), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 59 ELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFAR 118
+ + F D+D+ G + NEL G +++ + +M+R D D +G I++ EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMA 111
Query: 119 M 119
M
Sbjct: 112 M 112
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 60 LKEAFKVFDKDQDGYISPNELRHVMMNIG-EKVTDEELEQMVREADLDGDGQINYEEFAR 118
LK +K+ D D DG ++ E+ G EKV ++ V +AD +GDG I EEF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ-----VMKADANGDGYITLEEFLE 61
Query: 119 MML 121
L
Sbjct: 62 FSL 64
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 61 KEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
++ F DK G+++ + R ++M + +L + +D+D DG++ EEF M
Sbjct: 17 RQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
Query: 121 LL 122
L
Sbjct: 75 HL 76
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 64 FKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMV-READLDGDGQINYEEFARM 119
FK D + DG +S E++ ++ + +E+L Q++ + D DG+G+I+ EFA+
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 26 MISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 85
+ E+DVNG+G + + E +++K + + ++ L+ FK D D +G I NE
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 86 NI 87
+I
Sbjct: 64 SI 65
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 97 EQMVREADLDGDGQINYEE 115
E + +E D++GDG ++YEE
Sbjct: 3 EALFKEIDVNGDGAVSYEE 21
>pdb|1XNF|A Chain A, Crystal Structure Of E.Coli Tpr-Protein Nlpi
pdb|1XNF|B Chain B, Crystal Structure Of E.Coli Tpr-Protein Nlpi
Length = 275
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 43 FLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELE 97
+L L +K+ E +A+E LK+ F+ DK+Q G+ N + + NI E+ E L+
Sbjct: 150 WLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGW---NIVEFYLGNISEQTLXERLK 201
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 21/25 (84%)
Query: 96 LEQMVREADLDGDGQINYEEFARMM 120
L++M+++ DLD DGQ++++EF ++
Sbjct: 58 LDRMMKKLDLDSDGQLDFQEFLNLI 82
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 23 LRNMISEVDVNGNGTIEFGEFLNLMA 48
L M+ ++D++ +G ++F EFLNL+
Sbjct: 58 LDRMMKKLDLDSDGQLDFQEFLNLIG 83
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 72 DGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMMLL 122
+G++S ++++ V++N K+ + L ++ +D+D DG ++ +EFA M L
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 76
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 72 DGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMMLL 122
+G++S ++++ V++N K+ + L ++ +D+D DG ++ +EFA M L
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 76
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 72 DGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMMLL 122
+G++S ++++ V++N K+ + L ++ +D+D DG ++ +EFA M L
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 71
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 72 DGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMMLL 122
+G++S ++++ V++N K+ + L ++ +D+D DG ++ +EFA M L
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 71
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL 80
+ R+M++ +D + G + F EF L K + +K FD D+ G I NEL
Sbjct: 54 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKK-------WQGIYKRFDTDRSGTIGSNEL 106
Query: 81 RHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
G + ++R D G ++++ F ++
Sbjct: 107 PGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNFISCLV 146
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL 80
+ R+M++ +D + G + F EF L K + +K FD D+ G I NEL
Sbjct: 58 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKK-------WQGIYKRFDTDRSGTIGSNEL 110
Query: 81 RHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
G + ++R D G ++++ F ++
Sbjct: 111 PGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNFISCLV 150
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 21 EELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNEL 80
+ R+M++ +D + G + F EF L K + +K FD D+ G I NEL
Sbjct: 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKK-------WQGIYKRFDTDRSGTIGSNEL 99
Query: 81 RHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFARMML 121
G + ++R D G ++++ F ++
Sbjct: 100 PGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNFISCLV 139
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 4 IEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMK----------- 52
+E +A+ T ++L S DV+GNGTI E L ++ K
Sbjct: 90 FKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLP 149
Query: 53 --ENEAQEELKEAFKVFDKDQDGYISPNEL 80
EN ++ ++ +K F K+ D ++ E
Sbjct: 150 DDENTPEKRAEKIWKYFGKNDDDKLTEKEF 179
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 45 NLMARKMKENEAQ-EELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREA 103
+++AR K + + + F+ FD + IS E R + + +TDE+ +++ E
Sbjct: 10 DILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEM 69
Query: 104 DLDGDGQINYEEF 116
++ G++ Y +F
Sbjct: 70 PVNAKGRLKYPDF 82
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 62 EAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
E F DKD DG++S E+R + + G T L + D G+++ ++FA
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTGLPST--LLAHIWSLCDTKDCGKLSKDQFA 67
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 24 RNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHV 83
R+M++ +D + G + F EF L K + +K FD D+ G I NEL
Sbjct: 61 RSMVAVMDSDTTGKLGFEEFKYLWNNIKK-------WQGIYKRFDTDRSGTIGSNELPGA 113
Query: 84 MMNIGEKVTDEELEQMVREADLDGDGQINYEEF 116
G + ++R D G ++++ F
Sbjct: 114 FEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNF 145
>pdb|3SY1|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or70
Length = 245
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDV---NGNGTIEFGEFLNLMA 48
CITI+ L +A + DQ P E N++ ++++ N I+ E L A
Sbjct: 101 CITIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAA 151
>pdb|4DUQ|A Chain A, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
pdb|4DUQ|B Chain B, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
Length = 98
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 87 IGEKVTDEELEQMVREADLDGDGQINYEEFARMMLL 122
+GEKV +E L++++ D + D Q++++E+A + L
Sbjct: 47 VGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82
>pdb|2RGI|A Chain A, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A Resolution
pdb|2RGI|B Chain B, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A Resolution
Length = 98
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 87 IGEKVTDEELEQMVREADLDGDGQINYEEFARMMLL 122
+GEKV +E L++++ D + D Q++++E+A + L
Sbjct: 47 VGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 75 ISPNELRHVM---MNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+S EL+ ++ + IG K+ D E+ +++ + D + D ++N++E+ +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFL 77
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 21/25 (84%)
Query: 96 LEQMVREADLDGDGQINYEEFARMM 120
L++M+++ DL+ DGQ++++EF ++
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNLI 80
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 23 LRNMISEVDVNGNGTIEFGEFLNLMA 48
L M+ ++D+N +G ++F EFLNL+
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNLIG 81
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 75 ISPNELRHVM---MNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+S EL+ ++ + IG K+ D E+ ++ + D + D ++N++E+ +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFL 77
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 38 NELSHFLEEIKEQEVVDKVMETL----DSDGDGECDFQEF 73
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 39 NELSHFLEEIKEQEVVDKVMETL----DSDGDGECDFQEF 74
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To Sbi4211
Length = 89
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 39 NELSHFLEEIKEQEVVDKVMETL----DSDGDGECDFQEF 74
>pdb|4GXT|A Chain A, The Crystal Structure Of A Conserved Functionally Unknown
Protein From Anaerococcus Prevotii Dsm 20548
Length = 385
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 46 LMARKMKENEAQEELKEAFKVFDKDQDGYISPNE---LRHVMMNIGEKVTDEELEQMVRE 102
L+A+ K+NEA + F VFD D I E L + + N+ K EE +++R+
Sbjct: 24 LIAKHGKDNEAYNPDNKPFAVFDWDNTSIIGDVEEALLYYXVRNVSFKXDPEEFYELIRK 83
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase
Length = 91
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 38 NELSHFLEEIKEQEVVDKVMETL----DSDGDGECDFQEF 73
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 39 NELSHFLEEIKEQEVVDKVMETL----DSDGDGECDFQEF 74
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 14/73 (19%)
Query: 56 AQEELKEAFKVFDKDQDG--------YISPNELRHVMMNIGEKVTDEELEQMVREADLDG 107
+ EELK F+ +DK+ DG + E ++ + L+++ E D +G
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMS------TLDELFEELDKNG 56
Query: 108 DGQINYEEFARMM 120
DG++++EEF ++
Sbjct: 57 DGEVSFEEFQVLV 69
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Query: 19 TEEELRNMISEVDVNGNGTIEFGEF---LNLMARKMKENEAQEE---LKEAFK-VFDK-- 69
+ L+ D +GNG +E +F +A ++ E LK AF +FD
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLA 64
Query: 70 -----DQDGYISPNELRHVMMNI----GE----KVTDEELEQMVREADLDGDGQINYEEF 116
DG ++ + V N+ GE +V ++ +V D + DGQIN +EF
Sbjct: 65 KEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEF 124
Query: 117 ARMM 120
A +
Sbjct: 125 AAWL 128
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 8 AVAIKSLDQNPTEEELRNMISEVDV 32
VA+K L +N + ELR+++SE +V
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNV 79
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 8 AVAIKSLDQNPTEEELRNMISEVDV 32
VA+K L +N + ELR+++SE +V
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNV 79
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 8 AVAIKSLDQNPTEEELRNMISEVDV 32
VA+K L +N + ELR+++SE +V
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNV 79
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
E+ VAIK+L TE++ R+ +SE + G
Sbjct: 60 REIFVAIKTLKSGYTEKQRRDFLSEASIMG 89
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
E+ VAIK+L TE++ R+ +SE + G
Sbjct: 34 REIFVAIKTLKSGYTEKQRRDFLSEASIMG 63
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 75 ISPNELRHVM---MNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
+S EL+ ++ + IG K+ D E+ +++ + D + D ++N++E+ +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFL 77
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
E+ VAIK+L T+++ R+ +SE + G
Sbjct: 35 REICVAIKTLKAGYTDKQRRDFLSEASIMG 64
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 38 NELSHFLEEIKEQEVVDKVMETL----DEDGDGECDFQEF 73
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 39 NELSHFLEEIKEQEVVDKVMETL----DEDGDGECDFQEF 74
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
E+ VAIK+L T+++ R+ +SE + G
Sbjct: 41 REICVAIKTLKAGYTDKQRRDFLSEASIMG 70
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain
(Y742a)
Length = 306
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
E+ VAIK+L T+++ R+ +SE + G
Sbjct: 56 REICVAIKTLKAGYTDKQRRDFLSEASIMG 85
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 38 NELSHFLEEIKEQEVVDKVMETL----DNDGDGECDFQEF 73
>pdb|2QPT|A Chain A, Crystal Structure Of An Ehd Atpase Involved In Membrane
Remodelling
Length = 550
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 72 DGYISPNELRHVMMNIGEKVTDEELEQMVREADLDGDGQINYEEFA 117
DG +S ++ + M +G K+ + L ++ + +D+D DG ++ EEFA
Sbjct: 471 DGKLSGSKAKTWM--VGTKLPNSVLGRIWKLSDVDRDGMLDDEEFA 514
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
Length = 92
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 39 NELSHFLEEIKEQEVVDKVMETL----DNDGDGECDFQEF 74
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D DGDG+ +++EF
Sbjct: 39 NELSHFLEEIKEQEVVDKVMETL----DNDGDGECDFQEF 74
>pdb|3LFU|A Chain A, Crystal Structure Of E. Coli Uvrd
Length = 647
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKD 70
N E+R+ I ++ G + G F L R ++ + L + F++ D +
Sbjct: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSE 117
>pdb|2IS1|A Chain A, Crystal Structure Of Uvrd-Dna-So4 Complex
pdb|2IS1|B Chain B, Crystal Structure Of Uvrd-Dna-So4 Complex
pdb|2IS2|A Chain A, Crystal Structure Of Uvrd-Dna Binary Complex
pdb|2IS2|B Chain B, Crystal Structure Of Uvrd-Dna Binary Complex
pdb|2IS4|A Chain A, Crystal Structure Of Uvrd-Dna-Adpnp Ternary Complex
pdb|2IS4|B Chain B, Crystal Structure Of Uvrd-Dna-Adpnp Ternary Complex
pdb|2IS6|A Chain A, Crystal Structure Of Uvrd-Dna-Adpmgf3 Ternary Complex
pdb|2IS6|B Chain B, Crystal Structure Of Uvrd-Dna-Adpmgf3 Ternary Complex
Length = 680
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 17 NPTEEELRNMISEVDVNGNGTIEFGEFLNLMARKMKENEAQEELKEAFKVFDKD 70
N E+R+ I ++ G + G F L R ++ + L + F++ D +
Sbjct: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSE 117
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 41 GEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEE----- 95
G + ++ + E QE FK+ D D + + EL + ++ ++ E+
Sbjct: 1 GSHMGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 60
Query: 96 -------LEQMVREADLDGDGQINYEEFARMM 120
++ ++R+ D + DG I+Y EFA+ +
Sbjct: 61 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 92
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 26.2 bits (56), Expect = 4.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
>pdb|1W8G|A Chain A, Crystal Structure Of E. Coli K-12 Yggs
Length = 234
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 1 CITIEELAVAIKSLDQNPTEEELRNMISEVDV---NGNGTIEFGEFLNLMA 48
C TI+ L +A + DQ P E N++ ++++ N I+ E L A
Sbjct: 100 CHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAA 150
>pdb|1URJ|A Chain A, Single Stranded Dna-Binding Protein(Icp8) From Herpes
Simplex Virus-1
pdb|1URJ|B Chain B, Single Stranded Dna-Binding Protein(Icp8) From Herpes
Simplex Virus-1
Length = 1136
Score = 26.2 bits (56), Expect = 5.7, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 49 RKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQMVR 101
R M E E + + +A + I+ E H ++N +V D E+EQ++R
Sbjct: 581 RVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMR 633
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 14 LDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMA 48
LD + + ++ E+D NG+G ++F EF+ L+A
Sbjct: 45 LDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVA 79
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 6 ELAVAIKSLDQNPTEEELRNMISEVDVNG 34
EL VAIK+L TE++ R+ + E + G
Sbjct: 50 ELPVAIKTLKVGYTEKQRRDFLGEASIMG 78
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 24/65 (36%)
Query: 76 SPNELRHVMMNIGEK------VTDEELEQMVR------------------EADLDGDGQI 111
SP EL+ + K ++ EEL+Q+++ E D +GDG++
Sbjct: 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEV 64
Query: 112 NYEEF 116
++EEF
Sbjct: 65 SFEEF 69
>pdb|1IRJ|A Chain A, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|B Chain B, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|C Chain C, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|D Chain D, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|E Chain E, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|F Chain F, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|G Chain G, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|H Chain H, Crystal Structure Of The Mrp14 Complexed With Chaps
Length = 113
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 16 QNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
+N E+ + +++ ++D N + + F EF+ LMAR
Sbjct: 51 ENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 84
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 70 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
>pdb|4GGF|C Chain C, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|L Chain L, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|T Chain T, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|V Chain V, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 114
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 16 QNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
+N E+ + +++ ++D N + + F EF+ LMAR
Sbjct: 52 ENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 85
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 60 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 43 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDVNG 34
+E++VAIK+L TE++ R+ + E + G
Sbjct: 43 KEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
>pdb|1XK4|C Chain C, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|D Chain D, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|G Chain G, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|H Chain H, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|K Chain K, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|L Chain L, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
Length = 113
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 16 QNPTEEELRNMISEVDVNGNGTIEFGEFLNLMAR 49
+N E+ + +++ ++D N + + F EF+ LMAR
Sbjct: 51 ENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 84
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 96 LEQMVREADLDGDGQINYEEFARMM 120
L+++ E D +GDG++++EEF ++
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 63 AFKVFDKDQDGYISPNELRHVM--MNIGEKVTDEELEQMVREADLDGDGQINYEEFARMM 120
AF FDK G +S E++ V+ +I E ++ E D+D ++Y+EF ++
Sbjct: 260 AFADFDKS--GQLSKEEVQKVLEDAHIPESAR-KKFEHQFSVVDVDDSKSLSYQEFVMLV 316
Query: 121 LL 122
LL
Sbjct: 317 LL 318
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 96 LEQMVREADLDGDGQINYEEF 116
L+++ E D +GDG++++EEF
Sbjct: 50 LDELFEELDKNGDGEVSFEEF 70
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 96 LEQMVREADLDGDGQINYEEF 116
L+++ E D +GDG++++EEF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 96 LEQMVREADLDGDGQINYEEFARMM 120
L+++ E D +GDG++++EEF ++
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLV 71
>pdb|3SZ8|A Chain A, Crystal Structure Of 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei
pdb|3SZ8|B Chain B, Crystal Structure Of 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei
pdb|3SZ8|C Chain C, Crystal Structure Of 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei
pdb|3SZ8|D Chain D, Crystal Structure Of 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei
pdb|3TMQ|A Chain A, Crystal Structure Of A 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei In Complex With
D-Arabinose-5-Phosphate
pdb|3TMQ|B Chain B, Crystal Structure Of A 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei In Complex With
D-Arabinose-5-Phosphate
pdb|3TMQ|C Chain C, Crystal Structure Of A 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei In Complex With
D-Arabinose-5-Phosphate
pdb|3TMQ|D Chain D, Crystal Structure Of A 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei In Complex With
D-Arabinose-5-Phosphate
pdb|3UND|A Chain A, Substrate-Bound Crystal Structure Of
2-Dehydro-3-Deoxyphosphooctonate Aldolase From
Burkholderia Pseudomallei
pdb|3UND|B Chain B, Substrate-Bound Crystal Structure Of
2-Dehydro-3-Deoxyphosphooctonate Aldolase From
Burkholderia Pseudomallei
pdb|3UND|C Chain C, Substrate-Bound Crystal Structure Of
2-Dehydro-3-Deoxyphosphooctonate Aldolase From
Burkholderia Pseudomallei
pdb|3UND|D Chain D, Substrate-Bound Crystal Structure Of
2-Dehydro-3-Deoxyphosphooctonate Aldolase From
Burkholderia Pseudomallei
Length = 285
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 39 EFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGE 89
E + L + A ++ + + +A K + + ++SP +L+HV+ GE
Sbjct: 109 EIADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSKCGE 159
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 96 LEQMVREADLDGDGQINYEEFARMM 120
L+++ E D +GDG++++EEF ++
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 96 LEQMVREADLDGDGQINYEEFARMM 120
L+++ E D +GDG++++EEF ++
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 5 EELAVAIKSLDQNPTEEELRNMISEVDV 32
E + VA+K L + TEE+L +++SE+++
Sbjct: 66 EAVTVAVKMLKDDATEEDLSDLVSEMEM 93
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 96 LEQMVREADLDGDGQINYEEFARMM 120
L+++ E D +GDG++++EEF ++
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLV 71
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 96 LEQMVREADLDGDGQINYEEF 116
L+++ E D +GDG++++EEF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 96 LEQMVREADLDGDGQINYEEFARMM 120
L+++ E D +GDG++++EEF ++
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLV 71
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 78 NELRHVMMNIGEK-VTDEELEQMVREADLDGDGQINYEEF 116
NEL H + I E+ V D+ +E + D +GDG+ +++EF
Sbjct: 39 NELSHFLEEIKEQEVVDKVMETL----DSNGDGECDFQEF 74
>pdb|1HDH|A Chain A, Arylsulfatase From Pseudomonas Aeruginosa
pdb|1HDH|B Chain B, Arylsulfatase From Pseudomonas Aeruginosa
Length = 536
Score = 25.4 bits (54), Expect = 8.9, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 26 MISEVDVNGNGTIEF----GEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYI 75
M+ +D N +++ GE N M +N A+ L EAF F D G++
Sbjct: 286 MVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFL 339
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 2 ITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTIEFGEFLNLMARK 50
I I L ++ L T EL+ +I EV T + +FL +M K
Sbjct: 49 IDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.133 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,664,826
Number of Sequences: 62578
Number of extensions: 150539
Number of successful extensions: 1652
Number of sequences better than 100.0: 462
Number of HSP's better than 100.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 427
Number of HSP's gapped (non-prelim): 912
length of query: 124
length of database: 14,973,337
effective HSP length: 85
effective length of query: 39
effective length of database: 9,654,207
effective search space: 376514073
effective search space used: 376514073
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 45 (21.9 bits)