BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040633
(167 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297736978|emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 106/168 (63%), Gaps = 13/168 (7%)
Query: 1 MALWLPCPSPFSSLLLGSRQHTKTAIPRPFISKALTSNNS-SSVSVSRIYSHPSLQTKCS 59
MAL+ PS FS LL S +H+ + I+ + T+N VS+S + P L+ C
Sbjct: 1 MALFGWSPSSFS--LLQSHKHSSKTL----ITVSTTTNRKIHPVSISS--ASPGLRYPCL 52
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
+++ D SS T IFIKGLP+S EG +KKAFSQFGEV +V+I K+S QPLG A
Sbjct: 53 RCCATD----DESSSTRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFA 108
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
F WF+ +ESA LAV+ M+GKFF+GRF+ VKIA+ G SK + YKF
Sbjct: 109 FAWFTTEESAQLAVKMMDGKFFHGRFVFVKIAKPGPSKRHVKAAPYKF 156
>gi|297812083|ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319762|gb|EFH50184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 52 PSLQT-KC-SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTE 109
P L+T C +G + + S + + +F+KG +S++EGR+KK FS+FG+V VKI+
Sbjct: 50 PPLRTISCVAGDDGTREASSLPTPISSVFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIIN 109
Query: 110 KLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
+ ++Q LG +VWF+RKE A LAVE MNGKFF GRFILVK + GLS+ R
Sbjct: 110 ERTRQSLGYGYVWFNRKEDAQLAVEAMNGKFFDGRFILVKFGQPGLSRRR 159
>gi|356563602|ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 160
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 71/105 (67%)
Query: 63 SSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
++S + S IF+KGLP S +EG + K FS+FGEV +++ +K S Q LG A++W
Sbjct: 56 CTSSVPCNLPSSPKIFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIW 115
Query: 123 FSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
F ++ESA LAV MNGKFFYGRFI V IA+ G SK+ R T YKF
Sbjct: 116 FVKEESAQLAVLEMNGKFFYGRFIYVTIAKPGSSKSSKRATAYKF 160
>gi|42567949|ref|NP_197404.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005259|gb|AED92642.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 172
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 70/101 (69%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G + + S SS + +F+KG +S++EGR+KK FS+FG+V VKI+ + ++Q LG
Sbjct: 61 AGDDETREASSLPSSISSLFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGY 120
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
+VWF+ KE A AVE MNGKFF GRFILVK + GLS+ R
Sbjct: 121 GYVWFNSKEDAQSAVEAMNGKFFDGRFILVKFGQPGLSRRR 161
>gi|225432522|ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Vitis
vinifera]
Length = 145
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 87/140 (62%), Gaps = 13/140 (9%)
Query: 1 MALWLPCPSPFSSLLLGSRQHTKTAIPRPFISKALTSNNS-SSVSVSRIYSHPSLQTKCS 59
MAL+ PS FS LL S +H+ + I+ + T+N VS+S + P L+ C
Sbjct: 1 MALFGWSPSSFS--LLQSHKHSS----KTLITVSTTTNRKIHPVSISS--ASPGLRYPCL 52
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
+++ D SS T IFIKGLP+S EG +KKAFSQFGEV +V+I K+S QPLG A
Sbjct: 53 RCCATD----DESSSTRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFA 108
Query: 120 FVWFSRKESADLAVENMNGK 139
F WF+ +ESA LAV+ M+GK
Sbjct: 109 FAWFTTEESAQLAVKMMDGK 128
>gi|42573423|ref|NP_974808.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|117168081|gb|ABK32123.1| At5g19030 [Arabidopsis thaliana]
gi|332005260|gb|AED92643.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 126
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+KG +S++EGR+KK FS+FG+V VKI+ + ++Q LG +VWF+ KE A AVE MN
Sbjct: 61 FVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAMN 120
Query: 138 GK 139
GK
Sbjct: 121 GK 122
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+KGL S TE ++ +AFS+FGEV++ KIV +K K+P G FV F++K++A+ A E M
Sbjct: 36 VFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGFVTFAKKDAAEKACEGM 95
Query: 137 NGKFFYGRFILVKI 150
NGK GR I V+
Sbjct: 96 NGKLLDGRAIYVRF 109
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + TE + +AFSQ+G+V++ IVT+K++ +P G FV F+ +E+A+ A E M
Sbjct: 39 LFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEM 98
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK GR I V IA+ +++
Sbjct: 99 NGKVLNGRVIYVDIAKAKMNR 119
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T +++ GL TE ++ AF FG++V+V +V +K++ +P G AF+ +S +E ++ A+
Sbjct: 78 KTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAI 137
Query: 134 ENMNGKFFYGRFILVKIAE--TGLSKNRGRRTRY 165
E M+GKF GR I V++A+ + L +N+ +R RY
Sbjct: 138 EGMHGKFLDGRVIFVEVAKPRSELRQNQNQR-RY 170
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+KG+ S TE + +AFSQFGEVV+ KI+ +K +P G A+V F+R++ A+ A+ M
Sbjct: 36 LFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTEM 95
Query: 137 NGKFFYGRFILVKIA 151
NGK GR +LV A
Sbjct: 96 NGKVVDGRTVLVDYA 110
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T +++ GL TE ++ AF FG++V V +V +K++K+P G AF+ + +E A A+
Sbjct: 89 KTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAI 148
Query: 134 ENMNGKFFYGRFILVKIA----ETGLSKNRGRR 162
E M+GKF GR I V++A E S N G R
Sbjct: 149 EGMHGKFLDGRVIFVEVAKPRSELRQSHNYGHR 181
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 67/110 (60%)
Query: 44 SVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQ 103
S ++ Y +L+ + NSS +++ + +F+ GL +E ++ AF FGE+V+
Sbjct: 161 SENKDYEGRNLENSLNMPNSSEASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVE 220
Query: 104 VKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAET 153
VK++ +K+SK+ G AF+ ++ +E+A A++ MNGK G I+V +A+T
Sbjct: 221 VKVIIDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKT 270
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
S +T +++ GL TE ++ AF FG++V+VK+V ++++ +P G AF+ ++ +E +
Sbjct: 85 SPQTKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQK 144
Query: 132 AVENMNGKFFYGRFILVKIAE 152
A+E M+GKF GR I V++A+
Sbjct: 145 AIEGMHGKFLDGRVIFVEVAK 165
>gi|449433509|ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
gi|449490646|ref|XP_004158665.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
Length = 158
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+ ++ LP S E R+++ FS FGE+ +V + ++ +K+P G AF+ ++ ++ A LA+E M
Sbjct: 47 LMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDAMLALETM 106
Query: 137 NGKFFYGRFILVKIAETG 154
+ K F GR I V+IA G
Sbjct: 107 DCKIFDGRMIYVEIATPG 124
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis thaliana]
gi|21536799|gb|AAM61131.1| unknown [Arabidopsis thaliana]
gi|25084257|gb|AAN72206.1| unknown protein [Arabidopsis thaliana]
gi|332642921|gb|AEE76442.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 374
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 50 SHPSLQTKCSGSNSSNSTESDTSS-----RTGIFIKGLPESMTEGRVKKAFSQFGEVVQV 104
S SL G ++ +S + D S +FI GL +E ++ AF FGE+V+V
Sbjct: 252 SFESLNKDYEGDSTQDSRDQDDSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEV 311
Query: 105 KIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAET 153
KI+ +K+SK+ G AF+ ++ +E+A A++ MNGK G I+V +A+T
Sbjct: 312 KIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIVVDVAKT 360
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 34 ALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKK 93
A+ +NS S+++ Y S Q S + +ES +FI GL +E ++
Sbjct: 248 AVVPDNSFE-SLNKDYEGDSTQ----ASRDQDDSESPPIKTKKLFITGLSFYTSEKTLRA 302
Query: 94 AFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAET 153
AF FGE+V+VKI+ +K+SK+ G AF+ ++ +E+A A++ MNGK G I+V +A+T
Sbjct: 303 AFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASAALKEMNGKIINGWMIVVDVAKT 362
>gi|156543304|ref|XP_001603981.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Nasonia
vitripennis]
Length = 139
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
GS+ S D IFI GLP +TEG V FSQ+GE+V + +V +K + + G
Sbjct: 19 GSDRKGSWHDDYKDSAWIFIGGLPYDLTEGDVIAVFSQYGEIVNINLVRDKDTGKQKGYG 78
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ + + S LAV+N+NG GR I V
Sbjct: 79 FLCYEDQRSTILAVDNLNGIKILGRTIRV 107
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
SNSS +++ +F+ GL +E ++ AF FGE+V+VK++ +K+SK+ G AF
Sbjct: 283 SNSSEASQEAPLKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAF 342
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
V ++ +E+A A++ MNGK G I+V +A+
Sbjct: 343 VEYTTEEAASAALKEMNGKIINGWMIVVDVAK 374
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Query: 62 NSSNSTESDTSSRT------GIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQP 115
NS+N +S +S+ +FI GL +E ++ AF FGE+V+VKI+ +K+SK+
Sbjct: 200 NSANPPDSSEASQITHVRTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 259
Query: 116 LGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSK-NRGR 161
G AFV ++ +E+A A++ MNGK G I+V +A++ + +RGR
Sbjct: 260 KGYAFVKYTTEEAASSALKEMNGKIINGWMIVVDVAKSNPPRYSRGR 306
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ GL TE ++ F FG++V V +V +KL+ +P G AF+ ++ +E + A+E
Sbjct: 94 TRLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIE 153
Query: 135 NMNGKFFYGRFILVKIAE 152
M+GKF GR I V++A+
Sbjct: 154 GMHGKFLDGRVIFVEVAK 171
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
gi|223535726|gb|EEF37389.1| RNA binding protein, putative [Ricinus communis]
Length = 371
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 80 KGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGK 139
+GL +E ++ AF FGE+V+VKI+ +K+SK+ G AF+ ++ +E+A+ A++ MNGK
Sbjct: 284 EGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAANAALKEMNGK 343
Query: 140 FFYGRFILVKIAETGLSK-NRGRR 162
G I+V +A+T + +RGRR
Sbjct: 344 IINGWMIVVDVAKTSPPRYSRGRR 367
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 54/78 (69%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I + L + ++ +++ FS+FG++V+V +V +K +K+P G AF+ ++ ++ A LA+ENM
Sbjct: 40 IMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQYTSQDHAMLALENM 99
Query: 137 NGKFFYGRFILVKIAETG 154
+ K+ GR + V++A+ G
Sbjct: 100 DHKYLDGRVVCVELAKPG 117
>gi|297826049|ref|XP_002880907.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326746|gb|EFH57166.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+KG+ S TE + +AFSQ+G+V++V ++ +K+ +P G A+V FS KE A A+ +
Sbjct: 23 LFVKGISFSSTEETLTQAFSQYGQVLRVDVIMDKIRCRPKGIAYVTFSSKEEAGKALLEL 82
Query: 137 NGKFFYGRFILVKIAETG 154
NG+ GR +++ I + G
Sbjct: 83 NGRLVDGRVVILDITKAG 100
>gi|308806371|ref|XP_003080497.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116058957|emb|CAL54664.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 252
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++ GLP ++TEG V FSQFGE+V V +V E+ + + G AFV ++ + S LAV+N+
Sbjct: 38 VYAGGLPFALTEGDVLCVFSQFGEIVDVNVVREEETGKSRGFAFVCYADQRSTVLAVDNL 97
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
NG GR I V+ + +KN
Sbjct: 98 NGSTVGGRIIRVEHVDDYRAKN 119
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 44 SVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQ 103
S ++ Y SLQ +S + + +F+ GL +E ++ AF FGE+V+
Sbjct: 286 SNNKDYGGGSLQNSTDSLDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVE 345
Query: 104 VKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRT 163
VKI+ +K+SK+ G AF+ ++ +E+A A++ MNGK G I+V +A+ K R
Sbjct: 346 VKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPTPQKYSRSRP 405
Query: 164 R 164
R
Sbjct: 406 R 406
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
SLQ +S + + +F+ GL +E ++ AF FGE+V+VKI+ +K+S
Sbjct: 294 SLQNSTDSLDSMEANQPTNIKXKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKIS 353
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
K+ G AF+ +S +E+A A++ MNGK G I+V +A+
Sbjct: 354 KRSKGYAFIEYSTEEAASAALKEMNGKIINGWMIVVDVAK 393
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 44 SVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQ 103
S ++ Y SLQ +S + + +F+ GL +E ++ AF FGE+V+
Sbjct: 192 SNNKDYGGGSLQNSTDSLDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVE 251
Query: 104 VKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRT 163
VKI+ +K+SK+ G AF+ ++ +E+A A++ MNGK G I+V +A+ K R
Sbjct: 252 VKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPTPQKYSRSRP 311
Query: 164 R 164
R
Sbjct: 312 R 312
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
+SS + ++ +FI GL +E ++ AF FG++V+VKI+ +K+SK+ G AFV
Sbjct: 293 DSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFV 352
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRT 163
++ +E+A A++ MNGK G I+V IA+ + G R+
Sbjct: 353 EYTTEEAASAALKEMNGKIINGWMIVVDIAKPSPRRYGGNRS 394
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
+SS + ++ +FI GL +E ++ AF FG++V+VKI+ +K+SK+ G AFV
Sbjct: 293 DSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFV 352
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRT 163
++ +E+A A++ MNGK G I+V IA+ + G R+
Sbjct: 353 EYTTEEAASAALKEMNGKIINGWMIVVDIAKPSPRRYGGNRS 394
>gi|18415425|ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|51971865|dbj|BAD44597.1| putative protein [Arabidopsis thaliana]
gi|107738041|gb|ABF83619.1| At4g20030 [Arabidopsis thaliana]
gi|332658864|gb|AEE84264.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 152
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I ++ LP S +E +K+ FS FGE+ +VK++ ++ K+ G AF+ F+ ++ A LA+E M
Sbjct: 42 IMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETM 101
Query: 137 NGKFFYGRFILVKIAETG 154
+ + + GR I + IA+ G
Sbjct: 102 DRRMYNGRMIYIDIAKPG 119
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
T +F+ GL + T +K+AFS+FGEVVQ ++VT+++S G FV + E A+ +
Sbjct: 51 NTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGI 110
Query: 134 ENMNGKFFYGRFILVKIA 151
E M+GKF G I + A
Sbjct: 111 EGMDGKFLDGWVIFAEYA 128
>gi|340727255|ref|XP_003401963.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
terrestris]
Length = 139
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
SN S S IFI GLP +TEG V FSQ+GEVV + ++ +K + + G F
Sbjct: 20 SNRSISWHDQYGDSAWIFIGGLPYDLTEGDVITVFSQYGEVVNINLIRDKNTGKQKGYGF 79
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILV 148
+ + ++S LAV+N+NG GR I V
Sbjct: 80 LCYENQKSTVLAVDNLNGIKILGRIIRV 107
>gi|350423156|ref|XP_003493401.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
impatiens]
Length = 139
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
SN S S IFI GLP +TEG V FSQ+GEVV + ++ +K + + G F
Sbjct: 20 SNRSTSWHDQYGDSAWIFIGGLPYDLTEGDVITVFSQYGEVVNINLIRDKNTGKQKGYGF 79
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILV 148
+ + ++S LAV+N+NG GR I V
Sbjct: 80 LCYENQKSTVLAVDNLNGIKILGRTIRV 107
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + FSQ+GE+V V +V +K + + G AFV + + S +LAV+N+
Sbjct: 38 VFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAQILGRIIRV 109
>gi|147840589|emb|CAN72715.1| hypothetical protein VITISV_032469 [Vitis vinifera]
Length = 737
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + FSQ+GE+V V +V +K + + G AFV + + S +LAV+N+
Sbjct: 38 VFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAQILGRIIRV 109
>gi|112983436|ref|NP_001037638.1| RNA binding motif protein X-linked 2 [Bombyx mori]
gi|109706821|gb|ABG42997.1| RNA binding motif protein X-linked 2 [Bombyx mori]
Length = 181
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
GS+S S IF+ GLP TEG V FSQ+GE+V + +V +K + +P G A
Sbjct: 19 GSSSKTSWHDQYKDSAWIFVGGLPYDWTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFA 78
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
F+ + + S LAV+N+N GR + V E
Sbjct: 79 FLCYEDQRSTILAVDNLNSIKILGRTLRVDHCE 111
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL TE ++ AF +FG++ +V +V E+++K+P G AF+ ++ +E + A+E M
Sbjct: 69 LYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEGM 128
Query: 137 NGKFFYGRFILVKIA 151
GKF GR I V++A
Sbjct: 129 QGKFLDGRVIFVEVA 143
>gi|260814928|ref|XP_002602165.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
gi|229287472|gb|EEN58177.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
Length = 224
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S+T +++ LP ++T + K F ++G+VV+V ++ +K+++Q G AFV F ++E A
Sbjct: 8 SKTTVYVSNLPFALTNNDLHKIFEKYGKVVKVTVMRDKITRQSKGVAFVLFLKREEAHAC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRYK 166
V +NGK +GR + +A + G + RR YK
Sbjct: 68 VRALNGKVLFGRTVKCSMAKDNGRASEFIRRKVYK 102
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL TE ++ AF +FG++ +V +V E+++K+P G AF+ ++ +E + A+E M
Sbjct: 72 LYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEGM 131
Query: 137 NGKFFYGRFILVKIA 151
GKF GR I V++A
Sbjct: 132 QGKFLDGRVIFVEVA 146
>gi|402226055|gb|EJU06115.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 292
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GLP +TEG V FSQ+GE V V + +K++ +P G AF+ + ++S LAV+N+
Sbjct: 33 IFIGGLPYELTEGDVISIFSQYGEPVNVNMPRDKVTGKPKGFAFLMYEDQQSTVLAVDNL 92
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 93 NGANIVGRTIRV 104
>gi|297804134|ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
gi|297315787|gb|EFH46210.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I ++ LP S +E +K+ FS FGE+ +VK++ ++ K+ G AF+ F+ ++ A LA+E M
Sbjct: 42 IMVRNLPFSTSEDFLKREFSAFGEIAEVKLIRDESMKRSKGYAFIQFTSQDDAFLAIETM 101
Query: 137 NGKFFYGRFILVKIAETG 154
+ + + GR I + IA+ G
Sbjct: 102 DRRMYNGRMIYIDIAKPG 119
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI+GL TE ++ AF +FG++ +V +V ++++K+P G AF+ ++ +E + A+E M
Sbjct: 118 LFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEESKNAMEGM 177
Query: 137 NGKFFYGRFILVKIA 151
+GKF GR I V++A
Sbjct: 178 HGKFLDGRVIFVEVA 192
>gi|225434618|ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
Length = 429
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + FSQ+GE+V V +V +K + + G AFV + + S +LAV+N+
Sbjct: 38 VFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAQILGRIIRV 109
>gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana]
Length = 152
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I ++ LP S +E +K+ FS FGE+ +VK++ ++ ++ G AF+ F+ ++ A LA+E M
Sbjct: 42 IMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIETM 101
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+ + + GR I + IA+ G +G
Sbjct: 102 DRRMYNGRMIYIDIAKPGKRDFQG 125
>gi|224071049|ref|XP_002303346.1| predicted protein [Populus trichocarpa]
gi|222840778|gb|EEE78325.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Query: 18 SRQHTKTAIPRPFISKALTSNNSSSVSVSRIYSHP-SLQTKCSGSNSSNSTESDTSSRTG 76
+R + +IP P ++ A++ N + +P +L+ + S SN + S
Sbjct: 11 TRPLSTVSIPIPSLANAISQRN---------FKNPKTLKLRASISNPNFPLAS------R 55
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I + + S++E ++K FS FGE+ +VK+V ++ K+ AF+ ++ ++ A LA+ENM
Sbjct: 56 IMVTNIGHSISEATLQKEFSNFGEIAEVKLVKDETIKRSKPYAFIQYTSQDDAILALENM 115
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+ K GR I V +A+ G + RG
Sbjct: 116 DRKTLDGRLIFVDLAKPGKDRFRG 139
>gi|351721799|ref|NP_001235686.1| uncharacterized protein LOC100305971 [Glycine max]
gi|255627149|gb|ACU13919.1| unknown [Glycine max]
Length = 150
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
++S D + I +K LP S E ++K FS FG++ +VK+V + +K+ G AF+ +
Sbjct: 30 ASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDMNTKRSKGIAFIQY 89
Query: 124 SRKESADLAVENMNGKFFYGRFILVKIAETG 154
+ ++ A LA+E M+ K FYGR I V+IA G
Sbjct: 90 TCQDDAMLALETMDQKDFYGRTIGVEIARLG 120
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 8 PSPFSSLLLGSRQHTKTAIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNST 67
P+ F+ + S T + PF S+ +SSV V R S T C S++
Sbjct: 5 PAGFAPTVAASTSFGFTIVACPFPSRTHLPA-ASSVGV-RNQQRASTATACLPPPSTSH- 61
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
+ T +++ GL TE ++ AF +FG++ +V +V ++++K+P G AF+ ++ +E
Sbjct: 62 ----GAATRLYVSGLSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGFAFLSYTGEE 117
Query: 128 SADLAVENMNGKFFYGRFILVKIAE 152
A A+E M+GKF GR I V++A+
Sbjct: 118 EARGAMEGMHGKFLDGRVIFVEVAK 142
>gi|449460375|ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Cucumis sativus]
Length = 395
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + F+Q+GE+V V ++ +K + + G AFV + + S +LAV+N+
Sbjct: 38 VFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 98 NGAQILGRIVRV 109
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + TE + +AF+++G+V++ IVT+K++ + G FV F+ +E A+ A + M
Sbjct: 38 LFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKARDEM 97
Query: 137 NGKFFYGRFILVKIAET 153
NGK GR I V IA+
Sbjct: 98 NGKVLNGRVIYVDIAKA 114
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 63 SSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
SS +T+ +F+ GL +E ++ AF FGE+V+VKI+ +K+SK+ G AF+
Sbjct: 276 SSEATQVADVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIE 335
Query: 123 FSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
++ +++ A++ MNG+ G I+V +A+T L +NR
Sbjct: 336 YTTEDAGGAALKAMNGEIINGWMIVVDVAKTNL-RNR 371
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + TE + +AFS++G+V++ +V +K++ P G FV F+ E A+ A E M
Sbjct: 37 LFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREEM 96
Query: 137 NGKFFYGRFILVKIAET 153
NGK GR I V IA+
Sbjct: 97 NGKALNGRVIYVDIAKA 113
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + TE + +AFS++G+V++ +V +K++ P G FV F+ E A+ A E M
Sbjct: 37 LFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREEM 96
Query: 137 NGKFFYGRFILVKIAET 153
NGK GR I V IA+
Sbjct: 97 NGKALNGRVIYVDIAKA 113
>gi|356528571|ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817963 [Glycine max]
Length = 493
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 39 NSSSVSVSRIYSHPSLQTK---------CSGSNSSNSTESDTSSRTGIFIKGLPESMTEG 89
N++++ VS ++P+L + SGSN++ D SRT IF+ + + T+
Sbjct: 277 NANTLKVSNGNANPALDVQKEFSKAHLTASGSNAAGRPSEDVDSRT-IFVSNVHFAATKD 335
Query: 90 RVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
+ + F++FGEV++V IVT+ + QP G+A+V F RKE+AD A+ +++ F R + V
Sbjct: 336 GLSRHFNRFGEVLKVIIVTDAATGQPKGAAYVEFMRKEAADNAL-SLDNTSFMSRILKV 393
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GLP +TEG V FSQ+GE+V + +V +K + +P G AF+ + ++S LAV+N
Sbjct: 37 VFVGGLPYELTEGDVLCVFSQYGEIVNINMVRDKKTGKPKGFAFICYENQKSTVLAVDNF 96
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 97 NGVKIKGRTIRV 108
>gi|195347400|ref|XP_002040241.1| GM19036 [Drosophila sechellia]
gi|195564435|ref|XP_002105824.1| GD16475 [Drosophila simulans]
gi|194121669|gb|EDW43712.1| GM19036 [Drosophila sechellia]
gi|194203185|gb|EDX16761.1| GD16475 [Drosophila simulans]
Length = 466
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+GS S N + T +RT + + LP++MTE ++ FS GE+ VK++ +K Q LG
Sbjct: 129 AGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGY 188
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
FV + R + A+ AV +NG + I V A
Sbjct: 189 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFA 221
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSK-QPLGSAFVWFSRKE 127
SD +++ GLP++MT+ ++ F+ FG ++ +I+ + Q G F+ F ++E
Sbjct: 225 SDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKRE 284
Query: 128 SADLAVENMNG 138
A A+ +NG
Sbjct: 285 EATRAIIALNG 295
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L E + + F FG V VKIV + + Q G FV + + A +A+ +
Sbjct: 387 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 446
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 447 NGYTMGNRVLQV 458
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP +TE + FS G +VQ+ ++ +K++ P G AFV F ++E A A+E
Sbjct: 113 TNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAIE 172
Query: 135 NMNGKFFYGRF--ILVKIAE 152
++NG +GR I VKIAE
Sbjct: 173 HLNGTIPHGRTNPISVKIAE 192
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D SSRT + I LP+++TE + K F G V KI+ + + G FV + + + A
Sbjct: 22 DDSSRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDA 81
Query: 130 DLAVENMNG 138
A++ +NG
Sbjct: 82 IRAIQTLNG 90
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 63 SSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
SS +T+++ ++ +F+ GL +E ++ AF FGE+V+VKI+ +K+SK+ G AF+
Sbjct: 284 SSEATQAEVKTKR-LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIE 342
Query: 123 FSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRY 165
++ +E+ A++ MNG+ G I+V +A+ ++R R+ Y
Sbjct: 343 YTTEEAGGAALKAMNGQIINGWMIVVDVAK---HRSRDRQPPY 382
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 63 SSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
SS +T+++ ++ +F+ GL +E ++ AF FGE+V+VKI+ +K+SK+ G AF+
Sbjct: 254 SSEATQAEVKTKR-LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIE 312
Query: 123 FSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRY 165
++ +E+ A++ MNG+ G I+V +A+ ++R R+ Y
Sbjct: 313 YTTEEAGGAALKAMNGQIINGWMIVVDVAK---HRSRDRQPPY 352
>gi|357611289|gb|EHJ67406.1| RNA binding motif protein X-linked 2 [Danaus plexippus]
Length = 185
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
NS +S IF+ GLP +TEG V FSQ+GE+V + +V +K + + G AF+
Sbjct: 21 NSKSSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINLVRDKDTGRSKGFAFI 80
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIAE 152
+ + S LAV+N+N GR I V E
Sbjct: 81 CYEDQRSTILAVDNLNSIKILGRTIRVDHCE 111
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + TE + +AFS++G+V++ +V +K++ P G FV F+ E A+ A E M
Sbjct: 37 LFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNAREEM 96
Query: 137 NGKFFYGRFILVKIAET 153
NGK GR I V IA+
Sbjct: 97 NGKALNGRVIYVDIAKA 113
>gi|255585455|ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis]
gi|223526734|gb|EEF28964.1| RNA binding protein, putative [Ricinus communis]
Length = 152
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I +K L S+ E ++K FS FGE+ +VK+V + K+ F+ ++ ++ A LA+ENM
Sbjct: 46 IIVKNLGYSVGESSLQKEFSNFGEIAEVKLVKDDERKRSKAFVFIQYTCQDDAILAMENM 105
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+ K F GR I V +A+ G RG
Sbjct: 106 DRKIFDGRLIYVDLAKPGKETFRG 129
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+KGL S TE ++ +AFSQ+G VV+ IV K K+ G +V F+ +E A A M
Sbjct: 34 IFVKGLAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQIGM 93
Query: 137 NGKFFYGRFILVKIAETGLSKNR 159
NGK +GR + V + KN+
Sbjct: 94 NGKILHGRVLYVDMDPPNEQKNK 116
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL TE + +AFS +G+V++ KIVT+++S + G FV F+ ++ A+ A+E+M
Sbjct: 31 LFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIEDM 90
Query: 137 NGKFFYGRFILVKIAETGLS 156
GK GR I V A+ ++
Sbjct: 91 KGKTLNGRVIFVDYAKPNIN 110
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + F+Q+GEVV V +V +K + + G AFV + + S LAV+N+
Sbjct: 38 VFVGGVPYDLTEGDLLAVFAQYGEVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAKVLGRIIRV 109
>gi|297736228|emb|CBI24866.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 35 LTSNNSSSVSVSRIYSHPSLQTK---------CSGSNSSNSTESDTSSRTGIFIKGLPES 85
L N + VSV + P++ T+ GS S+ D SRT IF+ + +
Sbjct: 476 LMKANGNPVSVGNGNAKPAVDTQRESQKMQPSAPGSYSTGRPLEDADSRT-IFVNNVHFA 534
Query: 86 MTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRF 145
T+ + + F++FGEVV+V IVT+ + QP GSA+V F RKE+A+ A+ +++G F R
Sbjct: 535 ATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAAEHAL-SLDGTSFMSRI 593
Query: 146 ILV 148
+ V
Sbjct: 594 LKV 596
>gi|359487356|ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
Length = 700
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 35 LTSNNSSSVSVSRIYSHPSLQTK---------CSGSNSSNSTESDTSSRTGIFIKGLPES 85
L N + VSV + P++ T+ GS S+ D SRT IF+ + +
Sbjct: 482 LMKANGNPVSVGNGNAKPAVDTQRESQKMQPSAPGSYSTGRPLEDADSRT-IFVNNVHFA 540
Query: 86 MTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRF 145
T+ + + F++FGEVV+V IVT+ + QP GSA+V F RKE+A+ A+ +++G F R
Sbjct: 541 ATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAAEHAL-SLDGTSFMSRI 599
Query: 146 ILV 148
+ V
Sbjct: 600 LKV 602
>gi|357164112|ref|XP_003579952.1| PREDICTED: uncharacterized protein LOC100837530 [Brachypodium
distachyon]
Length = 689
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 35 LTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKA 94
+T N+ SV S P + GS+S+ E SRT +F+ + + T+ + +
Sbjct: 473 MTDNSKDSVHSSSFVETPKASSVAGGSHSTGQPEGGPDSRT-VFVNNVHFAATKDALSRH 531
Query: 95 FSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
F++FG V++ IVT+ ++ QP GSA++ F +KESA+ A+ +NG F R + V
Sbjct: 532 FNKFGAVLKTLIVTDGVTGQPTGSAYIEFLQKESAEQAL-TLNGTSFMSRILKV 584
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 57 KCSGSNSSNSTES----DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
K SG + S+E D ++ +F+ GL +E ++ AF FGE+V+VKI+ +++S
Sbjct: 280 KVSGDDGVKSSEGTGAVDIKTKR-LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRIS 338
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAET 153
K+ G AFV ++ +E+ A++ MNG+ G I+V +A+T
Sbjct: 339 KRSKGYAFVEYTTEEAGGAALKAMNGQIINGWMIVVDVAKT 379
>gi|125548231|gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
Length = 113
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + TE + +AFSQ+G+V++ IVT+K++ +P G FV F+ +E+A+ A E M
Sbjct: 39 LFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEM 98
Query: 137 NGK 139
NGK
Sbjct: 99 NGK 101
>gi|380025295|ref|XP_003696412.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Apis florea]
Length = 135
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GLP +TEG V FSQFGEVV + ++ +K + + G F+ + + S LAV+N
Sbjct: 33 IFIGGLPYDLTEGDVITVFSQFGEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNF 92
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 93 NGTKILGRTIRV 104
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL +E ++ AF FGE+V+VKI+ +++SK+ G AFV ++ +E+ A++ M
Sbjct: 301 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKAM 360
Query: 137 NGKFFYGRFILVKIAET 153
NG+ G I+V +A+T
Sbjct: 361 NGQIINGWMIVVDVAKT 377
>gi|356498939|ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 235
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + F+Q+GEVV V +V +K + + G AF+ + + S +LAV+N+
Sbjct: 38 VFVGGIPFDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAQVLGRIIRV 109
>gi|148223425|ref|NP_001086476.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Xenopus laevis]
gi|82236059|sp|Q6DJI9.1|ZCRB1_XENLA RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|49671136|gb|AAH75189.1| MGC82154 protein [Xenopus laevis]
Length = 218
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K S++ G +FV F KESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIAETGLSKNRGRRTRY 165
V +N K +GR I IA K+ GR T +
Sbjct: 68 VRGLNNKQLFGRAIKASIA-----KDNGRATEF 95
>gi|242025632|ref|XP_002433228.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
gi|212518769|gb|EEB20490.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
Length = 121
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GLP +TEG + FSQFGE V + +V +K S + G F+ + + S +LAV+N+
Sbjct: 36 VFVGGLPYDLTEGDIICVFSQFGEPVNINLVRDKDSGKSRGFCFLCYEDQRSTNLAVDNL 95
Query: 137 NGKFFYGRFILVKIAET 153
NG GR I V E
Sbjct: 96 NGVKILGRTIRVDHVEN 112
>gi|147906061|ref|NP_001079913.1| RNA binding motif protein, X-linked 2 [Xenopus laevis]
gi|34783857|gb|AAH56844.1| MGC64376 protein [Xenopus laevis]
Length = 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G S S D IFI GLP +TEG V FSQ+GEVV + + +K S + G
Sbjct: 21 GVKDSVSWHQDYKDSAWIFIGGLPFELTEGDVICVFSQYGEVVNINLARDKSSGRSRGFC 80
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
FV F + S LAV+N+NG GR I V
Sbjct: 81 FVCFEDQRSTVLAVDNLNGIKLKGRTIRV 109
>gi|326520181|dbj|BAK04015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + F+Q+GEVV V +V +K + + G AFV + + S LAV+N+
Sbjct: 38 VFVGGVPFDLTEGDLLAVFAQYGEVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAKVLGRIIRV 109
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
++T +++ GL TE ++ F QFG+++ + +V +K++ +P G AF+ + +E A A
Sbjct: 75 TKTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKA 134
Query: 133 VENMNGKFFYGRFILVKIAET 153
++ M+GKF GR I V+ A+T
Sbjct: 135 IQGMHGKFLDGRVIFVEEAKT 155
>gi|328772157|gb|EGF82196.1| hypothetical protein BATDEDRAFT_34645 [Batrachochytrium
dendrobatidis JAM81]
Length = 153
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP +TEG V FSQFGEVV + +V +K + + G AF+ + + S LAV+N+
Sbjct: 51 IYIGGLPYHLTEGDVICVFSQFGEVVDLDMVRDKETGKSKGFAFLAYEDQRSTVLAVDNL 110
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 111 NGIQISGRVIRV 122
>gi|303320035|ref|XP_003070017.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109703|gb|EER27872.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320034356|gb|EFW16301.1| U2 snRNP component IST3 [Coccidioides posadasii str. Silveira]
Length = 271
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
L+T S S ++ DT+ I+I GLP ++EG + FSQFGE V + +V +K +
Sbjct: 14 ELETAVSPEASWHADYRDTAY---IYIGGLPYDLSEGDILTIFSQFGEPVHLNLVRDKDT 70
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV------KIAETGLSKN 158
+ G AF+ + + S DLAV+N+ G GR + V + E GL N
Sbjct: 71 GKSKGFAFLKYEDQRSTDLAVDNLCGATVMGRLLRVDHMRYKRKEEEGLEDN 122
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
ST S +SSR +F+KG+ S T + +AFS+FGE+V+V I+ +K +P G A+V F+
Sbjct: 27 STNSASSSR--LFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAYVTFAT 84
Query: 126 KESADLAVENMNGKFFYGRFILV 148
+ A A+ MNGK GR + V
Sbjct: 85 ENEAKKALTEMNGKVIDGRPVFV 107
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+GS S N + + +RT + + LP++MTE ++ FS GE+ VK++ +K Q LG
Sbjct: 129 AGSGSQNGSNGSSETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGY 188
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
FV + R + A+ AV +NG + I V A
Sbjct: 189 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFA 221
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSK-QPLGSAFVWFSRKE 127
SD +++ GLP++MT+ ++ F+ FG ++ +I+ + Q G F+ F ++E
Sbjct: 225 SDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKRE 284
Query: 128 SADLAVENMNG 138
A A+ +NG
Sbjct: 285 EATRAIIALNG 295
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L E + + F FG V VKIV + + Q G FV + + A +A+ +
Sbjct: 387 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 446
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 447 NGYTMGNRVLQV 458
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 29 PFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNS----SNSTESDTSSR------TGIF 78
P IS+A+T S+ V + R++ CS ++ S ES T +R T +F
Sbjct: 8 PAISRAVTEVASAPVGLRRLF--------CSNASRFSFLSPQAESQTPARPQAEPSTNLF 59
Query: 79 IKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
+ GL + T ++ AF+QFGEV K+VT+++S G FV ++ E + + M+G
Sbjct: 60 VSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDG 119
Query: 139 KFFYGRFILVKIA 151
KF G I + A
Sbjct: 120 KFLDGWVIFAEYA 132
>gi|356551855|ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 354
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + F+Q+GEVV V +V +K + + G AF+ + + S +LAV+N+
Sbjct: 38 VFVGGIPFDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAQVLGRIIRV 109
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P TEG V F+Q+GEVV + +V +K + + G AF+ + + S +LAV+N+
Sbjct: 38 VFVGGIPFDFTEGDVIAVFAQYGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAQVSGRIIRV 109
>gi|430813261|emb|CCJ29365.1| unnamed protein product [Pneumocystis jirovecii]
Length = 272
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +FI G+ M E +++ FS+FG VV+ IV++ +K+ G FV + E AD A+E
Sbjct: 66 TNLFISGIAPRMDEKELEEIFSRFGNVVKCSIVSDPYTKESRGFGFVTMATPEDADKAIE 125
Query: 135 NMNGKFFYGRFILVKIAETG 154
NG+ +YGR V+ A G
Sbjct: 126 AANGQEYYGRVFSVEKARRG 145
>gi|119183786|ref|XP_001242884.1| hypothetical protein CIMG_06780 [Coccidioides immitis RS]
gi|392865790|gb|EAS31617.2| U2 snRNP component IST3 [Coccidioides immitis RS]
Length = 269
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
L+T S S ++ DT+ I+I GLP ++EG + FSQFGE V + +V +K +
Sbjct: 14 ELETAVSPEASWHADYRDTAY---IYIGGLPYDLSEGDILTIFSQFGEPVHLNLVRDKDT 70
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV------KIAETGLSKN 158
+ G AF+ + + S DLAV+N+ G GR + V + E GL N
Sbjct: 71 GKSKGFAFLKYEDQRSTDLAVDNLCGATVMGRLLRVDHMRYKRKEEEGLEDN 122
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 29 PFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNS----SNSTESDTSSR------TGIF 78
P IS+A+T S+ V + R++ CS ++ S ES T +R T +F
Sbjct: 8 PAISRAVTEVASAPVGLRRLF--------CSNASRFSFLSPQAESQTPARPQAEPSTNLF 59
Query: 79 IKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
+ GL + T ++ AF+QFGEV K+VT+++S G FV ++ E + + M+G
Sbjct: 60 VSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDG 119
Query: 139 KFFYGRFILVKIA 151
KF G I + A
Sbjct: 120 KFLDGWVIFAEYA 132
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T +++ GL TE ++ F QFG ++ + +V +K++ +P G AF+ + +E A A+
Sbjct: 76 KTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAI 135
Query: 134 ENMNGKFFYGRFILVKIAET--GLSKNRGRR 162
+ M+GKF GR I V+ A+T +S+ + RR
Sbjct: 136 QGMHGKFLDGRVIFVEEAKTRSDMSRAKPRR 166
>gi|383847795|ref|XP_003699538.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Megachile
rotundata]
Length = 139
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GLP +TEG V FSQ+GEVV + ++ +K + + G F+ + + S LAV+N
Sbjct: 36 IFIGGLPYDLTEGDVVTIFSQYGEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNF 95
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 96 NGTKILGRTIRV 107
>gi|347964873|ref|XP_309173.5| AGAP000977-PA [Anopheles gambiae str. PEST]
gi|333466517|gb|EAA04971.6| AGAP000977-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG V FSQ+GE+V V +V +K + + G AF+ + + S LAV+N+
Sbjct: 36 IFVGGLPYDLTEGDVLCVFSQYGEIVNVNLVRDKATGKSKGFAFICYEDQRSTVLAVDNL 95
Query: 137 NGKFFYGRFILV 148
NG G+ + V
Sbjct: 96 NGIKLVGKTLRV 107
>gi|328700229|ref|XP_003241188.1| PREDICTED: ELAV-like protein 4-like isoform 2 [Acyrthosiphon pisum]
Length = 392
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
S+ T + S++S + S+T + + LP++MT+ ++ FS GEV K++ +K++
Sbjct: 14 SIHTSSTNSHASQGNSLNEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVT 73
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + R E A+ A+ +NG + I V A
Sbjct: 74 GQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSFA 112
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS-KQPLGS---------AFVWFSRK 126
+++ GLP+ MT+ ++ FS +G ++ +I+ + ++ +Q +G+ F+ F ++
Sbjct: 124 LYVSGLPKHMTQQDLENLFSPYGRIITSRILCDNMTVRQFVGNTGGDHSPCVGFIRFDQR 183
Query: 127 ESADLAVENMNG 138
A+ A++ +NG
Sbjct: 184 IEAERAIQELNG 195
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + + + G FV + + A +A++++
Sbjct: 296 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 355
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 356 NGYTLGNRVLQV 367
>gi|115398724|ref|XP_001214951.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
gi|114191834|gb|EAU33534.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
Length = 292
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG V FSQ+GE V V +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPYDLSEGDVVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRMLRV 106
>gi|328700227|ref|XP_001951393.2| PREDICTED: ELAV-like protein 4-like isoform 1 [Acyrthosiphon pisum]
Length = 383
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
S+ T + S++S + S+T + + LP++MT+ ++ FS GEV K++ +K++
Sbjct: 14 SIHTSSTNSHASQGNSLNEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVT 73
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + R E A+ A+ +NG + I V A
Sbjct: 74 GQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSFA 112
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS-KQPLGS---------AFVWFSRK 126
+++ GLP+ MT+ ++ FS +G ++ +I+ + ++ +Q +G+ F+ F ++
Sbjct: 124 LYVSGLPKHMTQQDLENLFSPYGRIITSRILCDNMTVRQFVGNTGGDHSPCVGFIRFDQR 183
Query: 127 ESADLAVENMNG 138
A+ A++ +NG
Sbjct: 184 IEAERAIQELNG 195
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + + + G FV + + A +A++++
Sbjct: 287 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 346
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 347 NGYTLGNRVLQV 358
>gi|356512219|ref|XP_003524818.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 149
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
++S D + I +K LP S E ++K FS FG++ + K+V + +K+ G AF+ +
Sbjct: 29 ASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEGKLVKDMNTKRSKGIAFIQY 88
Query: 124 SRKESADLAVENMNGKFFYGRFILVKIAETG 154
+ ++ A LA+E M+ K FYGR I V+IA G
Sbjct: 89 TCQDDAMLALETMDQKDFYGRTIGVEIARLG 119
>gi|312379149|gb|EFR25518.1| hypothetical protein AND_09071 [Anopheles darlingi]
Length = 232
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 57 KCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL 116
K G NS + D++ IF+ GLP +TEG V FSQ+GE+V + +V +K S +
Sbjct: 79 KLGGKNSWHDQYRDSA---WIFVGGLPYDLTEGDVICVFSQYGEIVNINLVRDKTSGKSK 135
Query: 117 GSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
G F+ + + S LAV+N+NG G+ + V
Sbjct: 136 GFCFICYEDQRSTVLAVDNLNGIKLVGKTLRV 167
>gi|157129340|ref|XP_001655377.1| RNA-binding protein, putative [Aedes aegypti]
gi|108882112|gb|EAT46337.1| AAEL002461-PA [Aedes aegypti]
Length = 138
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G NS + D++ IF+ GLP +TEG + FSQ+GE+V + +V +K + + G +
Sbjct: 22 GKNSWHDQYKDSA---WIFVGGLPSELTEGDLLAVFSQYGEIVNINLVRDKKTGKSKGFS 78
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ F + S L V+NMNG GR + V
Sbjct: 79 FICFEDQRSTVLTVDNMNGIKLLGRTLRV 107
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL TE ++ AFS +G+VV V+I+ K +++ G FV FS +E A+ A++ M
Sbjct: 90 LFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEEEANTALKEM 149
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
NGK G I V IA+ R R K
Sbjct: 150 NGKILNGWLISVDIAKPTPRSGRAREMPQK 179
>gi|258570729|ref|XP_002544168.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
gi|237904438|gb|EEP78839.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
Length = 263
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQFGE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPYDLSEGDILTIFSQFGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV------KIAETGLSKN 158
G GR + V + E GL N
Sbjct: 95 CGANIMGRLLRVDHMRYKRKEEEGLEDN 122
>gi|226443342|ref|NP_001139887.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
gi|221219686|gb|ACM08504.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
Length = 221
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
SR+ +++ LP S+T + K FS++G+VV+V IV +K +++ G AFV F KESA
Sbjct: 8 SRSTVYVSNLPFSLTNSDLHKLFSKYGKVVKVTIVKDKETRKSKGVAFVLFLDKESAQSC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
++N K +GR + IA + G + RR Y
Sbjct: 68 FRSLNNKQLFGRTVKASIAIDNGRATEFIRRRNY 101
>gi|224104290|ref|XP_002313385.1| predicted protein [Populus trichocarpa]
gi|222849793|gb|EEE87340.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + F+Q+GEVV +V +K + + G AF+ + + S +LAV+N+
Sbjct: 38 VFVGGIPFDLTEGDLLAVFAQYGEVVDANLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAQVLGRIIRV 109
>gi|224104037|ref|XP_002313291.1| predicted protein [Populus trichocarpa]
gi|222849699|gb|EEE87246.1| predicted protein [Populus trichocarpa]
Length = 762
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 31 ISKALTSNNSSSVSVSRIYSHPSLQ-TKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEG 89
+SK ++ N ++ I P + SG ++ D SRT IF+ + + T+
Sbjct: 502 VSKPVSVGNGNAKPAGGIQQEPQKPPSSASGPYTAGCPLEDADSRT-IFVSNVHFAATKD 560
Query: 90 RVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVK 149
+ + F++FGEV++V IVT+ + QP GSA+V F KE+AD A+ +++G F R + V
Sbjct: 561 SLSRHFNKFGEVLKVVIVTDAATGQPTGSAYVEFMHKEAADNAL-SLDGTSFMSRILKVM 619
Query: 150 IAETGLS 156
ET LS
Sbjct: 620 NIETILS 626
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
+SD T ++I LP ++TE ++ F ++G +VQ I+ +KL+ QP G AFV F+++E
Sbjct: 162 QSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFNKRE 221
Query: 128 SADLAVENMNGKFFYG--RFILVKIAE 152
A A+ +N G + ++V++AE
Sbjct: 222 EAQEAISALNNVIPQGGNQPLIVRVAE 248
>gi|425774283|gb|EKV12592.1| hypothetical protein PDIP_51790 [Penicillium digitatum Pd1]
gi|425776284|gb|EKV14506.1| hypothetical protein PDIG_32200 [Penicillium digitatum PHI26]
Length = 281
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG V FSQ+GE V V +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDLSEGDVIAIFSQYGEPVHVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR + V A
Sbjct: 95 GGATVMGRLLRVDHA 109
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ G+P +TEG + F+Q+GEVV V +V +K + + AF+ + + SADLAV+N+
Sbjct: 38 IFVGGIPFDLTEGDLLPVFAQYGEVVDVNLVRDKGTGKSKDFAFLAYEDQRSADLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAQVLGRIIKV 109
>gi|432942753|ref|XP_004083057.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Oryzias latipes]
Length = 221
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + K F+++G+VV+V IV +K ++Q G AFV F +ESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRQSKGVAFVLFLDRESAHNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 ARAINNKQLFGRMIKASIAIDNGRATEFIRRRNY 101
>gi|332026997|gb|EGI67093.1| RNA-binding motif protein, X-linked 2 [Acromyrmex echinatior]
Length = 172
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP ++TEG V FSQ+GEVV + ++ +K + + G F+ + + S LAV+N
Sbjct: 69 IFVGGLPYNLTEGDVIAIFSQYGEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNF 128
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 129 NGIKILGRVIRV 140
>gi|154285756|ref|XP_001543673.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407314|gb|EDN02855.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 232
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 38 IYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 97
Query: 137 NGKFFYGRFILVKIA------ETGLSKN 158
G GR I V A E GL N
Sbjct: 98 GGATILGRMIRVDHARYKRKEEEGLEDN 125
>gi|322798581|gb|EFZ20185.1| hypothetical protein SINV_01390 [Solenopsis invicta]
Length = 523
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ FS GEV K++ +KLS Q LG FV + R E
Sbjct: 21 SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPED 80
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 81 AEKAINTLNGLRLQNKTIKVSYA 103
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G S +D ++I GLP ++EG + FSQ+GE V V +V +K + + G
Sbjct: 17 AGITPEGSWHADYRDTAFVYIGGLPYEVSEGDIVTIFSQYGEPVYVNLVRDKETGKSKGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTR 164
AF+ + + S DLAV+N++G GR ++ + T K G R
Sbjct: 77 AFLKYEDQRSCDLAVDNLSGAKVMGR--IISVDHTRYKKKEGEELR 120
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
+SD T ++I LP ++TE ++ F ++G +VQ I+ +KL+ QP G AFV F+++E
Sbjct: 184 QSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFNKRE 243
Query: 128 SADLAVENMNGKFFYG--RFILVKIAE 152
A A+ +N G + ++V++AE
Sbjct: 244 EAQEAISALNNVIPQGGNQPLIVRVAE 270
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M +GR+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKS-KGFGFVSFEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ + V A+ + +
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVER 272
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS + A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSK--GFGFVCFSSPDEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|91085985|ref|XP_972080.1| PREDICTED: similar to CG10466 CG10466-PA [Tribolium castaneum]
gi|270010180|gb|EFA06628.1| hypothetical protein TcasGA2_TC009547 [Tribolium castaneum]
Length = 266
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP +TEG + FSQ+GEVV + ++ +K S + G F+ + + S DLAV+N
Sbjct: 36 VFIGGLPFDLTEGDIICIFSQYGEVVNINLIRDKDSGKSKGFCFLCYEDQRSTDLAVDNF 95
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRT 163
NG R I V +G++T
Sbjct: 96 NGIKILNRTIRVDHVSNYKVPKQGKKT 122
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M +GR+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKS-KGFGFVSFEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ + V A+ + +
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVER 272
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS + A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSK--GFGFVCFSSPDEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|2827657|emb|CAA16611.1| putative protein [Arabidopsis thaliana]
gi|7268798|emb|CAB79003.1| putative protein [Arabidopsis thaliana]
Length = 115
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 82 LPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFF 141
LP S +E +K+ FS FGE+ +VK++ ++ K+ G AF+ F+ ++ A LA+E M+ + +
Sbjct: 10 LPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMY 69
Query: 142 YGRFILVKIAETGLSKNRG 160
GR I + IA+ G +G
Sbjct: 70 NGRMIYIDIAKPGKRDFQG 88
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP S T+ V+ AF+Q GEV V IVT++ S Q G FV E A A+E
Sbjct: 3 TRLYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIE 62
Query: 135 NMNGKFFYGRFILVKIAE 152
NMNG GR + V AE
Sbjct: 63 NMNGAMMDGRPLRVNEAE 80
>gi|307168947|gb|EFN61833.1| ELAV-like protein 4 [Camponotus floridanus]
Length = 466
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ FS GEV K++ +KLS Q LG FV + R E
Sbjct: 22 SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPED 81
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 82 AEKAINTLNGLRLQNKTIKVSYA 104
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 15/106 (14%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
+ ++I LP+ +TE V + FS +GE++Q ++ +K++ P G AFV FSR E A A+
Sbjct: 113 SNLYITNLPKDVTEDDVHRLFSNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIA 172
Query: 135 NMNGKFFYGRF--ILVKIAET-GLSK------------NRGRRTRY 165
+++GK + V++AE G K NRG++ R+
Sbjct: 173 DLDGKLLENAMLPLSVRVAEDHGRQKAQYLENWSFSMHNRGKKRRF 218
>gi|115456325|ref|NP_001051763.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|122246709|sp|Q10B98.1|C3H25_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=OsC3H25
gi|15042832|gb|AAK82455.1|AC091247_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|18855068|gb|AAL79760.1|AC096687_24 putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
gi|108711850|gb|ABF99645.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550234|dbj|BAF13677.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|125588469|gb|EAZ29133.1| hypothetical protein OsJ_13196 [Oryza sativa Japonica Group]
Length = 312
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+P +TEG + F+Q+GEVV V +V +K + + G AF+ + + S LAV+N+
Sbjct: 38 VFVGGIPYDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 98 NGAKVLGRIVRV 109
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ FS GEV K++ +KLS Q LG FV + R E
Sbjct: 22 SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPED 81
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 82 AEKAINTLNGLRLQNKTIKVSYA 104
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + + + G FV + E A +A++++
Sbjct: 278 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 337
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 338 NGYTLGNRVLQV 349
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana]
gi|330252880|gb|AEC07974.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 116
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 49/72 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+KG+ S TE + +AFSQ+G+V++V ++ +K+ +P G A+V FS KE A+ A+ +
Sbjct: 23 LFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKALLEL 82
Query: 137 NGKFFYGRFILV 148
N + GR +++
Sbjct: 83 NAQLVDGRVVIL 94
>gi|225554554|gb|EEH02851.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 276
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA------ETGLSKN 158
G GR I V A E GL N
Sbjct: 95 GGATILGRMIRVDHARYKRKEEEGLEDN 122
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+KGL S TE + KAFSQ+G V++ I+ K + G +V F+++E A A +M
Sbjct: 35 VFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGYVIFAKEEEACKAQIDM 94
Query: 137 NGKFFYGRFILVKI 150
NGK +GR I V +
Sbjct: 95 NGKILHGRVIYVDV 108
>gi|301619753|ref|XP_002939264.1| PREDICTED: hypothetical protein LOC100497806 [Xenopus (Silurana)
tropicalis]
Length = 280
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G S S D +FI GLP ++EG + FSQ+GEVV + +V +K S + G
Sbjct: 32 GVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFC 91
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ F + S LAV+N+NG GR I V
Sbjct: 92 FLCFEDQRSTVLAVDNLNGIKVKGRTIRV 120
>gi|240277136|gb|EER40645.1| RNA binding domain-containing protein [Ajellomyces capsulatus H143]
gi|325093957|gb|EGC47267.1| RNA binding domain-containing protein [Ajellomyces capsulatus H88]
Length = 276
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA------ETGLSKN 158
G GR I V A E GL N
Sbjct: 95 GGATILGRMIRVDHARYKRKEEEGLEDN 122
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 22 TKTAIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKG 81
T+ A+ P + + NS+S S + + P T T T +F+ G
Sbjct: 3 TRAAVAAPRVLRRFFCTNSASSSFPFVSTLPPGATPAP-------TRPTAEPNTNLFVSG 55
Query: 82 LPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFF 141
L + R+++ F++FGEVV ++VT+++S G FV ++ E A +E M+GKF
Sbjct: 56 LSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFL 115
Query: 142 YGRFILVKIA 151
G I + A
Sbjct: 116 DGWVIFAEYA 125
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL TE + +AFS+FGEVV+VK+V +++S++ G FV ++ + A+ A
Sbjct: 32 TKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAKA 91
Query: 135 NMNGKFFYGRFILV 148
MNGK GR I V
Sbjct: 92 EMNGKVLSGRIIFV 105
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
+ ++I LP+ +TE V + FS +GE++Q ++ +K++ P G AFV FSR E A A+
Sbjct: 113 SNLYITNLPKDVTEDDVHRLFSNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIA 172
Query: 135 NMNGKFFYGRF--ILVKIAET 153
+++GK + V++AE
Sbjct: 173 DLDGKLLENAMLPLSVRVAED 193
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ FS GEV K++ +KL+ Q LG FV + R E
Sbjct: 22 SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRSED 81
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 82 AEKAINTLNGLRLQNKTIKVSYA 104
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-------------GSAFVWF 123
+++ GLP++MT+ ++ FS +G ++ +I+ + ++ + G F+ F
Sbjct: 116 LYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRF 175
Query: 124 SRKESADLAVENMNGKFFYG--RFILVKIAETGLSKNR 159
++ A+ A++ +NG G I VK A + N+
Sbjct: 176 DQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNK 213
>gi|221129809|ref|XP_002164481.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Hydra
magnipapillata]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GLP +TEG V FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 39 IFIGGLPYDLTEGDVLAVFSQYGEIVNINLVRDKKTGKFKGYGFLCYEDQRSTILAVDNF 98
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 99 NGIKLGGRTIRV 110
>gi|170572253|ref|XP_001892040.1| RNA binding motif protein [Brugia malayi]
gi|158603075|gb|EDP39148.1| RNA binding motif protein, putative [Brugia malayi]
Length = 168
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+GSNS S S I+I GLP + EG V FSQ+GE+V + ++ ++ + + G
Sbjct: 23 TGSNSK-SWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQYGEIVNINLIRDRKTGKSRGF 81
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
AFV + + S LAV+N NG R I V E
Sbjct: 82 AFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVE 115
>gi|339247525|ref|XP_003375396.1| RNA-binding motif protein, X-linked 2 [Trichinella spiralis]
gi|316971276|gb|EFV55078.1| RNA-binding motif protein, X-linked 2 [Trichinella spiralis]
Length = 287
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GLP ++EG + FSQ+GEVVQ+ ++ +K + + G F+ + + S LAV+N
Sbjct: 57 IFIGGLPFQLSEGDIICVFSQYGEVVQLNLIRDKKTGKSRGFCFLCYEDQRSTVLAVDNF 116
Query: 137 NGKFFYGRFILVKIAET-GLSKNRG 160
NG GR I V E + K RG
Sbjct: 117 NGIKLLGRIIRVDHVENYRVPKERG 141
>gi|62858501|ref|NP_001016941.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|89268233|emb|CAJ83312.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G S S D +FI GLP ++EG + FSQ+GEVV + +V +K S + G
Sbjct: 21 GVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFC 80
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ F + S LAV+N+NG GR I V
Sbjct: 81 FLCFEDQRSTVLAVDNLNGIKVKGRTIRV 109
>gi|255949586|ref|XP_002565560.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592577|emb|CAP98933.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 279
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V V +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDLSEGDIITIFSQYGEPVHVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR + V A
Sbjct: 95 GGATVMGRLLRVDHA 109
>gi|167560891|ref|NP_001107973.1| zinc finger CCHC-type and RNA binding motif 1 [Xenopus (Silurana)
tropicalis]
gi|165970829|gb|AAI58311.1| zcrb1 protein [Xenopus (Silurana) tropicalis]
Length = 215
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K S++ G AFV F KES+
Sbjct: 8 SKSTVYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRRSKGVAFVLFLDKESSQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
V +N K +GR I IA + G + RR Y
Sbjct: 68 VRGLNNKQLFGRAIKASIAIDNGRATEFIRRRNY 101
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ FS++G+ + VK++T+ K G FV F R E A+ AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSK-GFGFVSFERHEDANKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
+MNGK G+ + V A+ + + + R++
Sbjct: 250 DMNGKDVNGKIMFVGRAQKKVERQAELKRRFE 281
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E+ + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|166796147|gb|AAI59019.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|166796532|gb|AAI59007.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G S S D +FI GLP ++EG + FSQ+GEVV + +V +K S + G
Sbjct: 21 GVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFC 80
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ F + S LAV+N+NG GR I V
Sbjct: 81 FLCFEDQRSTVLAVDNLNGIKVKGRTIRV 109
>gi|443722948|gb|ELU11589.1| hypothetical protein CAPTEDRAFT_212631 [Capitella teleta]
Length = 240
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
SR+ +++ P S+T + K F ++G+VV+V I+ +K +++ G AFV F KESA
Sbjct: 8 SRSTVYVSNFPFSLTNNDLHKIFEKYGKVVKVTILCDKNTRRSKGVAFVLFLEKESAHQC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
V+ MN +GR I IA + G +++ RR Y
Sbjct: 68 VKAMNSTEMFGRTIKCSIANDNGRAQDFIRRKVY 101
>gi|307194503|gb|EFN76795.1| ELAV-like protein 2 [Harpegnathos saltator]
Length = 349
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ FS GEV K++ +KLS Q LG FV + R E
Sbjct: 21 SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPED 80
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 81 AEKAISTLNGLRLQNKTIKVSYA 103
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + + + G FV + E A +A++++
Sbjct: 268 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 327
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 328 NGYTLGNRVLQV 339
>gi|238499545|ref|XP_002381007.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|83772685|dbj|BAE62813.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692760|gb|EED49106.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|391869311|gb|EIT78510.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 291
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V V +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGSTVLGRILRV 106
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+G +++AF FGEVVQ K++T++ + + G FV F+ + S + A+++MN
Sbjct: 8 FVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDMN 67
Query: 138 GKFFYGRFILVKIA 151
GK GR I V A
Sbjct: 68 GKELDGRNITVNQA 81
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I L TE ++KAF FGEV V+I+T+KLS + G AFV + KE + A++ +
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAIDGL 62
Query: 137 NGKFFYGRFILVKIA 151
NG GR I V A
Sbjct: 63 NGTQIRGREIKVNEA 77
>gi|301624826|ref|XP_002941699.1| PREDICTED: polyadenylate-binding protein 4-like [Xenopus (Silurana)
tropicalis]
Length = 632
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ FS++G+ + VK++T+ K G FV F R E A+ AV+
Sbjct: 197 TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSK-GFGFVSFERHEDANKAVD 255
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
+MNGK G+ + V A+ + + + R++
Sbjct: 256 DMNGKDVNGKIMFVGRAQKKVERQAELKRRFE 287
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 67 TESDTSSRT----GIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
+E D S R +FIK L +S+ + FS FG ++ K+V ++ + G AFV
Sbjct: 93 SERDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVH 150
Query: 123 FSRKESADLAVENMNG------KFFYGRF 145
F +++AD A+E MNG K F GRF
Sbjct: 151 FETQDAADRAIEKMNGMLLNDRKVFVGRF 179
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E+ + G FV FS E A AV M
Sbjct: 302 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFG--FVCFSSPEEATKAVTEM 359
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 360 NGRIVGSKPLYVALAQ 375
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP +++E ++ AFS+FGEV I+T+K S + G FV ++A A+E+M
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESM 62
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRY 165
+ K F GR I+V A+ + RR RY
Sbjct: 63 HNKDFKGRSIMVNEAKP-REERAPRRDRY 90
>gi|134076074|emb|CAK39433.1| unnamed protein product [Aspergillus niger]
Length = 289
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPYDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRVLRV 106
>gi|162312534|ref|XP_001713104.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|1723533|sp|Q10422.1|YDC1_SCHPO RecName: Full=Uncharacterized RNA-binding protein C25G10.01
gi|159884012|emb|CAB16378.2| RNA-binding protein [Schizosaccharomyces pombe]
Length = 297
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+ M E +++ FS+FG V V+I+ E ++K G F+ FS E A A++N+
Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162
Query: 137 NGKFFYGRFILVKIA 151
N + FYGR + V+ A
Sbjct: 163 NSQEFYGRVLNVQKA 177
>gi|395509895|ref|XP_003759222.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Sarcophilus
harrisii]
Length = 274
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GLP +TEG V FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFIGGLPYELTEGDVICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIRGRTIRV 109
>gi|121713176|ref|XP_001274199.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402352|gb|EAW12773.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 284
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V V ++ +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDISEGDIVTIFSQYGEPVHVNLIRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR + V A
Sbjct: 95 GGATVLGRILRVDHA 109
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G N S S S+ IF+ G P +TEG + FSQ+GE+V + +V +K + + G
Sbjct: 21 GVNESVSWHSEYKDSAWIFVGGFPYELTEGDLICVFSQYGEIVNINLVRDKKTGKSKGFC 80
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ + + S LAV+N NG GR I V
Sbjct: 81 FICYEDQRSTILAVDNFNGIKIKGRTIRV 109
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++TE +V++ FS+FG++VQ I+ +KL+ P G AFV + ++E A A+
Sbjct: 185 TNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAIN 244
Query: 135 NMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 245 QLHGTIPEGGSEPLSVKIAE 264
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S RT + I LP+SMTE + F G V +++ + + G FV +++ E
Sbjct: 93 SRNDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAED 152
Query: 129 ADLAVENMNG 138
A A+ +NG
Sbjct: 153 ALTAINTLNG 162
>gi|317150318|ref|XP_001823946.2| U2 snRNP component ist3 [Aspergillus oryzae RIB40]
Length = 221
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V V +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGSTVLGRILRV 106
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + + +K AFS FG+VV K++T++ S + G FV FS ESA A+ M
Sbjct: 38 LFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAM 97
Query: 137 NGKFFYGRFILVKIAE 152
+GK GR I V A
Sbjct: 98 DGKDLNGRSIRVSYAN 113
>gi|225447115|ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|297739201|emb|CBI28852.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL S+ E +K AFS FG+V +V+I+ +K S + G FV+FS++ A A +
Sbjct: 38 TKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKD 97
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRG 160
M+GK F GR + V A L K RG
Sbjct: 98 AMDGKAFLGRPLRVSYA---LEKVRG 120
>gi|402582034|gb|EJW75980.1| Rbmx2 protein, partial [Wuchereria bancrofti]
Length = 147
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+GSN+ S S I+I GLP + EG V FSQ+GE+V + ++ ++ + + G
Sbjct: 23 TGSNNK-SWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQYGEIVNINLIRDRKTGKSRGF 81
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
AFV + + S LAV+N NG R I V E
Sbjct: 82 AFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVE 115
>gi|126324409|ref|XP_001377779.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 198
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GLP +TEG + FSQ+GE+V + +V +K +++ G F+ + + S LAV+N
Sbjct: 38 VFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTRKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIRGRTIRV 109
>gi|317029441|ref|XP_001391597.2| U2 snRNP component ist3 [Aspergillus niger CBS 513.88]
Length = 280
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPYDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRVLRV 106
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
SN T + ++ +F+ +P +TE +K+ FS+ G V+ ++VT++ + +P G F +
Sbjct: 2 SNKTRASSAKERSVFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEY 61
Query: 124 SRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
+ +A A+ N+NG GR + V A+ G N R R+
Sbjct: 62 ADGATALSAMRNLNGYEINGRNLRVDFADGGDKSNSAERKRHD 104
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL TE + AFS +G+VV+ K++T+++S++ G FV F+ ++ A+ A+ M
Sbjct: 34 LFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITEM 93
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
N K GR + V A+ ++ G
Sbjct: 94 NEKALNGRVVFVDYAKPDTKRSMG 117
>gi|405960385|gb|EKC26312.1| RNA-binding motif protein, X-linked 2 [Crassostrea gigas]
Length = 233
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP +TEG V FSQ+GE+V + +V + + + G F+ + + S LAV+N+
Sbjct: 26 VFIGGLPYDLTEGDVIAVFSQYGELVNINLVRDGKTGKSRGFCFLCYEDQRSTVLAVDNL 85
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V E
Sbjct: 86 NGIKLLGRTIRVDHVE 101
>gi|345493619|ref|XP_003427110.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Nasonia vitripennis]
Length = 383
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
GSN S++ + S+T + + LP++MT+ ++ FS GEV K++ +KL+ Q LG
Sbjct: 15 GSNLGQSSQEE--SKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYG 72
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
FV + R E A+ A+ +NG + I V A
Sbjct: 73 FVNYHRPEDAEKAINTLNGLRLQNKTIKVSYA 104
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + + + G FV + E A +A++++
Sbjct: 302 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 361
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 362 NGYTLGNRVLQV 373
>gi|291400895|ref|XP_002716702.1| PREDICTED: RNA binding motif protein, X-linked 2 [Oryctolagus
cuniculus]
Length = 198
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 37 VFVGGLPYELTEGDILCVFSQYGEIVNIHLVRDKKTGKSRGFGFICYEDQRSTVLAVDNF 96
Query: 137 NGKFFYGRFILVKIA 151
NG GR I V A
Sbjct: 97 NGIKIKGRTIRVDHA 111
>gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]
Length = 325
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SDT ++I GLP+SMT+ V+ FSQFG ++ +++ ++ + G AF+ F ++
Sbjct: 99 SDTIKDANLYISGLPKSMTQKDVEDMFSQFGRIINSRVLVDQATGVSRGVAFIRFDKRAE 158
Query: 129 ADLAVENMNGK 139
A+ A+ N+NG+
Sbjct: 159 AEDAINNLNGQ 169
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
E ++T + + LP++M++ ++ FS GEV K++ +K++ LG FV +
Sbjct: 12 EEGKDAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPS 71
Query: 128 SADLAVENMNG 138
A+ A+ +NG
Sbjct: 72 DAERAISTLNG 82
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 71 TSSRTG--IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
TSS G IFI L + E + + F FG V VK++ + + + G FV S E
Sbjct: 237 TSSNNGWCIFIYNLGQEADETILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMSNYED 296
Query: 129 ADLAVENMNG 138
A +A+ ++NG
Sbjct: 297 AAMAIASLNG 306
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
T +++ LP ++TE +V++ FS+FG++VQ I+ +KL+ P G AFV + ++E A A+
Sbjct: 167 ETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAI 226
Query: 134 ENMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 227 NQLHGTIPEGGSEPLSVKIAE 247
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S RT + I LP+SMTE + F G V +++ + + G FV +++ E
Sbjct: 76 SRNDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAED 135
Query: 129 ADLAVENMNG 138
A A+ +NG
Sbjct: 136 ALTAINTLNG 145
>gi|328792242|ref|XP_394166.4| PREDICTED: ELAV-like protein 2-like [Apis mellifera]
Length = 378
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ FS GEV K++ +KL+ Q LG FV + R E
Sbjct: 22 SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPED 81
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 82 AEKAINTLNGLRLQNKTIKVSYA 104
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 31/114 (27%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVT-----------------EKLSKQPL--- 116
+++ GLP++MT+ ++ FS +G ++ +I+ EK+ PL
Sbjct: 116 LYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPEKMMMDPLNNL 175
Query: 117 ---------GSAFVWFSRKESADLAVENMNGKFFYG--RFILVKIAETGLSKNR 159
G F+ F ++ A+ A++ +NG G I VK A + N+
Sbjct: 176 NRLPTGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNK 229
>gi|291408201|ref|XP_002720429.1| PREDICTED: CG10466-like [Oryctolagus cuniculus]
Length = 431
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG V FSQ+GEVV + +V +K + + G F+ + + S LAV+N
Sbjct: 140 IFLGGLPYELTEGDVICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 199
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 200 NGIKIKGRTIRV 211
>gi|119479609|ref|XP_001259833.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119407987|gb|EAW17936.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 294
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V V ++ +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDLSEGDIITIFSQYGEPVHVDLIRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR + V A
Sbjct: 95 TGATVLGRVLRVDHA 109
>gi|170060753|ref|XP_001865940.1| RNA-binding motif protein [Culex quinquefasciatus]
gi|167879121|gb|EDS42504.1| RNA-binding motif protein [Culex quinquefasciatus]
Length = 137
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 57 KCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL 116
K G NS + D++ IF+ GLP +TEG + FSQ+GE+V + +V ++ + +
Sbjct: 19 KFGGKNSWHDQYRDSAW---IFVGGLPSELTEGDLLAVFSQYGEIVNINLVRDRKTGKSK 75
Query: 117 GSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
G F+ F + S L V+N+NG GR + V
Sbjct: 76 GFGFICFEDQRSTVLTVDNLNGIKLLGRTLRV 107
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
F+ L S T+ +K AFS++G+V + K+V +K S + G AFV F K++ + A+E+M
Sbjct: 9 CFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDM 68
Query: 137 NGKFFYGRFILVKIAE-TGLSKNR 159
NG GR I V A+ G+ ++R
Sbjct: 69 NGLDLEGRAITVDKAQPQGVGRDR 92
>gi|145348674|ref|XP_001418770.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579000|gb|ABO97063.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 122
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++ GL +MTEG + FSQFGEVV V +V ++ + G AF+ ++ + S LAV+N+
Sbjct: 38 VYAGGLAFNMTEGDILAVFSQFGEVVDVNLVRDEEKGRSRGFAFICYADQRSTVLAVDNL 97
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
NG GR I V + KN
Sbjct: 98 NGATVVGRTIKVDHVDDYKMKN 119
>gi|187097098|ref|NP_001119609.1| sex-lethal [Acyrthosiphon pisum]
gi|98986311|tpe|CAJ55783.1| TPA: sex-lethal [Acyrthosiphon pisum]
gi|239792967|dbj|BAH72757.1| ACYPI000005 [Acyrthosiphon pisum]
Length = 205
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++++ LP S+TE ++ F+ +G++VQ I+ +K S P G AFV +++KE A A+
Sbjct: 95 TNLYVQNLPRSITERELEDLFAPYGQIVQKNILKDKYSGLPRGVAFVRYNKKEDAQKAII 154
Query: 135 NMNGKFFYG--RFILVKIAE 152
+NG G + VKIAE
Sbjct: 155 QLNGVLLEGCTEHLSVKIAE 174
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
E +S T + I LP+SMT+ ++ + F+Q G++ +++ + + G FV F R E
Sbjct: 2 EPQDTSMTNLIINYLPQSMTDKKLHQMFTQIGQIEACRVMKDVKTGYSFGFGFVNFVRPE 61
Query: 128 SADLAVENMNG 138
A A+E MNG
Sbjct: 62 DASKAIEVMNG 72
>gi|242790685|ref|XP_002481602.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218718190|gb|EED17610.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V V +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVMGRVLRV 106
>gi|345493621|ref|XP_003427111.1| PREDICTED: ELAV-like protein 3-like isoform 3 [Nasonia vitripennis]
gi|345493623|ref|XP_001603257.2| PREDICTED: ELAV-like protein 3-like isoform 1 [Nasonia vitripennis]
Length = 349
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
GSN S++ + S+T + + LP++MT+ ++ FS GEV K++ +KL+ Q LG
Sbjct: 15 GSNLGQSSQEE--SKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYG 72
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
FV + R E A+ A+ +NG + I V A
Sbjct: 73 FVNYHRPEDAEKAINTLNGLRLQNKTIKVSYA 104
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-------------GSAFVWF 123
+++ GLP++MT+ ++ FS +G ++ +I+ + ++ + G F+ F
Sbjct: 116 LYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDNLPGLSKGVGFIRF 175
Query: 124 SRKESADLAVENMNGKFFYG--RFILVKIAETGLSKNR 159
++ A+ A++ +NG G I VK A + N+
Sbjct: 176 DQRVEAERAIQELNGTIPKGSTEPITVKFANNPSNNNK 213
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + + + G FV + E A +A++++
Sbjct: 268 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 327
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 328 NGYTLGNRVLQV 339
>gi|380027075|ref|XP_003697261.1| PREDICTED: ELAV-like protein 2-like [Apis florea]
Length = 362
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ FS GEV K++ +KL+ Q LG FV + R E
Sbjct: 22 SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPED 81
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 82 AEKAINTLNGLRLQNKTIKVSYA 104
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-------------GSAFVWF 123
+++ GLP++MT+ ++ FS +G ++ +I+ + ++ + G F+ F
Sbjct: 116 LYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRF 175
Query: 124 SRKESADLAVENMNG 138
++ A+ A++ +NG
Sbjct: 176 DQRVEAERAIQELNG 190
>gi|67536990|ref|XP_662269.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|40741517|gb|EAA60707.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|259482500|tpe|CBF77042.1| TPA: hypothetical protein ANIA_04665 [Aspergillus nidulans FGSC A4]
Length = 279
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRVLRV 106
>gi|444517993|gb|ELV11894.1| RNA-binding motif protein, X-linked 2, partial [Tupaia chinensis]
Length = 323
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GEVV + +V +K + + G F+ + + S LAV+N
Sbjct: 35 IFLGGLPYELTEGDIICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 94
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 95 NGIKIKGRTIRV 106
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++TE +V++ FS+FG++VQ I+ +KL+ P G AFV + ++E A A+
Sbjct: 124 TNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAIN 183
Query: 135 NMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 184 QLHGTIPEGGSEPLSVKIAE 203
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S RT + I LP+SMTE + F G V +++ + + G FV +++ E
Sbjct: 32 SRNDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAED 91
Query: 129 ADLAVENMNG 138
A A+ +NG
Sbjct: 92 ALTAINTLNG 101
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+G +++AF FGEVVQ K++T++ + + G FV F+ + S + A+++MN
Sbjct: 5 FVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDMN 64
Query: 138 GKFFYGRFILVKIA 151
GK GR I V A
Sbjct: 65 GKELDGRNITVNQA 78
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
DT+S +++ GL TE +K++F QFGEVV VKIV ++ S + G FV FS +
Sbjct: 2 DDTNS---VYVGGLSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRA 58
Query: 129 ADLAVENMNGKFFYGRFILV 148
A +A+++M+G+ GR I V
Sbjct: 59 ATVAIQDMDGRQIEGRTIRV 78
>gi|328876029|gb|EGG24393.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 280
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
SG++ ++S D S IF G+P + EG V FSQ+GEV + +V K + + G
Sbjct: 17 SGASETSSWHEDYSHSCWIFAGGMPFDLNEGDVVTVFSQYGEVDEYDLVRNKETGKSQGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILV 148
AF+ + ++S LAV+N+NG GR I V
Sbjct: 77 AFIKYMDQKSTILAVDNLNGVKILGRTIRV 106
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + + +K AFS FG+VV K++T++ S + G FV FS ESA A+ M
Sbjct: 38 LFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAM 97
Query: 137 NGKFFYGRFILVKIAE 152
+GK GR I V A
Sbjct: 98 DGKDLDGRSIRVSYAN 113
>gi|239938028|gb|ACS36113.1| RNA-binding protein Elav1 [Capitella teleta]
Length = 143
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
S+T + + LP+SMT+ ++ FS GEV K++ +K + Q LG FV + R+E A
Sbjct: 25 DSKTNLIVNYLPQSMTQDDIRSLFSSIGEVESCKLIRDKATGQSLGYGFVNYKRQEDASK 84
Query: 132 AVENMNGKFFYGRFILVKIA 151
A+ ++NG + I V +A
Sbjct: 85 AITSLNGLRLQNKTIKVSVA 104
>gi|452823797|gb|EME30804.1| RNA-binding protein [Galdieria sulphuraria]
Length = 147
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP E +K FSQFGEV++V++ + +P G AFV F+ +E A++A M
Sbjct: 10 IYIGHLPHGFYENELKGFFSQFGEVLKVRVARSVKTFRPKGYAFVMFANREVAEIACSAM 69
Query: 137 NGKFFYGRFILVKIA 151
+G F Y + ++ K+
Sbjct: 70 DGYFMYNKILVCKVV 84
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FSQ+G++V VK++T+ K G FV F E+A AVE
Sbjct: 190 TNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSK-GFGFVSFDTHEAAQRAVE 248
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ + V A+
Sbjct: 249 YMNGKDICGQMVFVGRAQ 266
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L S+ + + FS FG+++ K++++ K G AFV F + +AD A+E M
Sbjct: 100 VFIKNLDRSIDNKMLYEHFSAFGKILSSKVMSD--DKGSRGYAFVHFQSQSAADRAIEEM 157
Query: 137 NG 138
NG
Sbjct: 158 NG 159
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L E++ E ++++AFS FG + +VK++ E+ + G + FS E A A+ M
Sbjct: 295 LYIKNLDETIDEEQLRRAFSSFGSMSRVKVMEEEGRSKGFG--LICFSCPEEATKAMAEM 352
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + I + +A+
Sbjct: 353 NGQVLGSKAINIALAQ 368
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ LP +TE + + F+ G V+ ++I + ++++ LG A+V F A ++ M
Sbjct: 12 LYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLDTM 71
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 72 NFDMIQGKSI 81
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I L TE ++KAF FGEV V+I+T+KLS + G AFV + K+ + A++ +
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAIDGL 62
Query: 137 NGKFFYGRFILVKIA 151
NG GR I V A
Sbjct: 63 NGTQIRGREIKVNEA 77
>gi|410989439|ref|XP_004000969.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Felis catus]
Length = 507
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 219 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 278
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 279 NGIKIKGRTIRV 290
>gi|340720106|ref|XP_003398484.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus terrestris]
Length = 331
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+++ I++ GL E + E + AF FGE+V V+I + S++ G AF+ F E A
Sbjct: 41 TNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 100
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
A++NMN +GR I V IA+
Sbjct: 101 AAIDNMNDSELFGRTIRVNIAK 122
>gi|239612039|gb|EEQ89026.1| U2 snRNP component IST3 [Ajellomyces dermatitidis ER-3]
Length = 258
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 15 IYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 74
Query: 137 NGKFFYGRFILV------KIAETGLSKN 158
G GR I V + E GL N
Sbjct: 75 GGATVLGRMIRVDHVRYKRKEEEGLEDN 102
>gi|224059648|ref|XP_002299951.1| predicted protein [Populus trichocarpa]
gi|222847209|gb|EEE84756.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D SRT IF+ + + T+ + + F++FGEV++V +VT+ + QP GSA+V F RKE+A
Sbjct: 501 DADSRT-IFVSNVHFAATKDSLSRHFNKFGEVLKVVLVTDAATGQPTGSAYVEFMRKEAA 559
Query: 130 DLAVENMNGKFFYGRFILV 148
D A+ +++G F R + V
Sbjct: 560 DNAL-SLDGTSFMSRIVKV 577
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T+ +++AFS+FG V++ ++VT+K++ G AFV ++ +E AD E M
Sbjct: 49 LFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQEEADKGKEGM 108
Query: 137 NGKFFYGRFILVKIA 151
+GKF G I A
Sbjct: 109 DGKFLDGWVIFADYA 123
>gi|361127085|gb|EHK99065.1| putative Zinc finger CCCH domain-containing protein 42 [Glarea
lozoyensis 74030]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D T I+I GLP ++EG + FSQFGE V + ++ +K + + G AF+ + + S
Sbjct: 37 DKPRTTYIYIGGLPFELSEGDIITIFSQFGEPVYINLIRDKETGKSKGFAFLKYEDQRST 96
Query: 130 DLAVENMNGKFFYGRFILV 148
DLAV+N+ G GR + V
Sbjct: 97 DLAVDNLGGSVIMGRTLKV 115
>gi|403279255|ref|XP_003931175.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 117
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 118 NGIKIKGRTIRV 129
>gi|296411281|ref|XP_002835362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629140|emb|CAZ79519.1| unnamed protein product [Tuber melanosporum]
Length = 322
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
S S +D S ++I GLP ++EG + FSQFGE V V ++ +K + + G AF+ +
Sbjct: 22 SASWHTDWSDTAYVYIGGLPYELSEGDIITIFSQFGEPVHVNLIRDKDTGKSKGFAFLKY 81
Query: 124 SRKESADLAVENMNGKFFYGRFILV 148
+ S +LAV+N+ G GR I V
Sbjct: 82 EDQRSTNLAVDNLGGATILGRIIRV 106
>gi|453088501|gb|EMF16541.1| RRM_1-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 114
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 57 KCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL 116
KC SN+S T D ++I GLP ++EG + FSQ+G V + +V +K + +
Sbjct: 17 KCIPSNASWHT--DYRDTAYLYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKDTGKSR 74
Query: 117 GSAFVWFSRKESADLAVENMNGKFFYGRFILVK 149
G F+ + + S DLAV+N++G GR I V
Sbjct: 75 GFCFLKYEDQRSCDLAVDNLSGAGVMGRVISVD 107
>gi|350410727|ref|XP_003489121.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus impatiens]
Length = 361
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+++ I++ GL E + E + AF FGE+V V+I + S++ G AF+ F E A
Sbjct: 71 TNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 130
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
A++NMN +GR I V IA+
Sbjct: 131 AAIDNMNDSELFGRTIRVNIAK 152
>gi|395545903|ref|XP_003775408.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Sarcophilus harrisii]
Length = 310
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 19 VFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 78
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 79 NGIKIRGRTIRV 90
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ F+ GEV K++ +KL+ Q LG FV + R E
Sbjct: 22 SQEESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPED 81
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 82 AEKAINTLNGLRLQNKTIKVSYA 104
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/75 (20%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-------------GSAFVWF 123
+++ GLP++MT+ ++ F+ +G ++ +I+ + ++ + G F+ F
Sbjct: 116 LYVSGLPKNMTQQDLENLFNPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRF 175
Query: 124 SRKESADLAVENMNG 138
++ A+ A++ +NG
Sbjct: 176 DQRVEAERAIQELNG 190
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ L S+T + FS FG++ +V IV +K +++ G AF+ ++ ++ A A
Sbjct: 17 SKSTVYVSNLDFSLTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFILYASRDDAHAA 76
Query: 133 VENMNGKFFYGRFILVKIAE-TGLSKNRGRRTRYK 166
V+ MNGK R + V IAE G +K RR YK
Sbjct: 77 VKTMNGKILNKRTLKVSIAEDNGRAKEFIRRREYK 111
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 197 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSK-GFGFVSFEKHEDANKAVE 255
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ + V A+ + + + R++
Sbjct: 256 EMNGKDINGKMVFVGRAQKKVERQAELKRRFE 287
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 107 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 164
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 165 NGMLLNDRKVFVGRF 179
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 302 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 359
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 360 NGRIVGSKPLYVALAQ 375
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
F+ L S T+ +K AFS++G+V + K+V +K S + G AFV F K++ + A+E+M
Sbjct: 45 CFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDM 104
Query: 137 NGKFFYGRFILVKIAE-TGLSKNR 159
NG GR I V A+ G+ ++R
Sbjct: 105 NGLDLEGRAITVDKAQPQGVGRDR 128
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK L E M + R++ FS+FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDESGKSK-GFGFVSFERHEDARKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
MNGK G+ I V A+ + R ++KF
Sbjct: 250 EMNGKDLNGKQIYVGRAQKKVE--RQTELKHKF 280
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L S+ + FS FG ++ K+V ++ + G FV F +E A+ A+E M
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEEAERAIEKM 158
Query: 137 NGKFFYGRFILV 148
NG F R + V
Sbjct: 159 NGMFLNDRKVFV 170
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K+ E + G FV FS E A AV M
Sbjct: 306 LYVKNLDDGIDDERLRKEFSPFGTITSAKVTMEGGRSKGFG--FVCFSSPEEATKAVTEM 363
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 364 NGRIVATKPLYVALAQ 379
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ ++K AF +FG++ + K+V +K S + G FV F K++ D A++ M
Sbjct: 9 CFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGMDLDGRTITVDKAQ 84
>gi|355705153|gb|EHH31078.1| RNA-binding motif protein, X-linked 2, partial [Macaca mulatta]
Length = 321
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 37 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 96
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 97 NGIKIKGRTIRV 108
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
FI GL S ++ R+K AF ++G++V+ K+V +K S + G FV F KE+ + A+E MN
Sbjct: 232 FIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEAMN 291
Query: 138 GKFFYGRFILVKIAE 152
G GR I V A+
Sbjct: 292 GIDLDGRTITVDKAQ 306
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK L E M + R++ F +FG + VK++T++ K G FV F R E A AVE
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSK-GFGFVSFERHEDARKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
MNGK G+ I V A+ + R ++KF
Sbjct: 250 EMNGKDLNGKQIYVGRAQKKV--ERQTELKHKF 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L S+ + FS FG ++ K+V ++ + G FV F +E A+ A+E M
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEEAERAIEKM 158
Query: 137 NGKF------FYGRF 145
NG F F GRF
Sbjct: 159 NGMFLNDHKVFVGRF 173
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K+ E + G FV FS E A AV M
Sbjct: 306 LYVKNLDDGIDDERLRKEFSPFGTITSAKVTMEGGRSKGFG--FVCFSSPEEATKAVTEM 363
Query: 137 NGKFFYGRFILVKIAE 152
NGK + + V +A+
Sbjct: 364 NGKIVATKPLYVALAQ 379
>gi|348552954|ref|XP_003462292.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cavia
porcellus]
Length = 388
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG V FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 90 IFLGGLPYELTEGDVICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 149
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 150 NGIKIKGRTIRV 161
>gi|443897423|dbj|GAC74764.1| hsp27-ere-tata-binding protein/Scaffold attachment factor
[Pseudozyma antarctica T-34]
Length = 285
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D + + + GL ++ TE +++AF ++G + + +++ + +++P G AFV + + E A
Sbjct: 69 DNNPGNNLHVSGLSKTTTERDLEEAFGKYGAIQRAQVMYDPHTREPRGFAFVTYEKAEDA 128
Query: 130 DLAVENMNGKFFYGRFILVKIAETGLSK 157
+ A+ MNG F GR I V A G ++
Sbjct: 129 EAAITAMNGSDFQGRKITVDKARRGRAR 156
>gi|223946841|gb|ACN27504.1| unknown [Zea mays]
gi|407232618|gb|AFT82651.1| C3H30 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414873727|tpg|DAA52284.1| TPA: RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ G+P +TEG + F+Q+GEVV V +V +K + + G AF+ + + S LAV+N+
Sbjct: 38 VYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAKVLGRIIKV 109
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + +++AFSQ+GEVV+ KI+ ++ + + G FV FS ++S + A+E MN
Sbjct: 11 FVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIEGMN 70
Query: 138 GKFFYGRFILVKIAE 152
G+ GR I V A+
Sbjct: 71 GQNLDGRNITVNEAQ 85
>gi|344267834|ref|XP_003405770.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Loxodonta africana]
Length = 217
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRMIKASIAIDNGRAAEFIRRRHY 101
>gi|212534622|ref|XP_002147467.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210069866|gb|EEA23956.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V V ++ +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHVNLIRDKDTGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVMGRVLRV 106
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK L E M + R++ F +FG + VK++T++ K G FV F R E A AVE
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSK-GFGFVSFERHEDARKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
MNGK G+ I V A+ + R ++KF
Sbjct: 250 EMNGKDLNGKQIYVGRAQKKV--ERQTELKHKF 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L S+ + FS FG ++ K+V ++ + G FV F +E A+ A+E M
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEEAERAIEKM 158
Query: 137 NGKF------FYGRF 145
NG F F GRF
Sbjct: 159 NGMFLNDHKVFVGRF 173
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K+ E + G FV FS E A AV M
Sbjct: 306 LYVKNLDDGIDDERLRKEFSPFGTITSAKVTMEGGRSKGFG--FVCFSSPEEATKAVTEM 363
Query: 137 NGKFFYGRFILVKIAE 152
NGK + + V +A+
Sbjct: 364 NGKIVATKPLYVALAQ 379
>gi|432900542|ref|XP_004076708.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Oryzias
latipes]
Length = 255
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G N S S+ IF+ G P +TEG + FSQ+GE+V V +V +K + + G
Sbjct: 21 GVNEKVSWHSEYRDSAWIFVGGFPYELTEGDLLCVFSQYGEIVNVNLVRDKKTGKSKGFC 80
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ + + S LAV+N NG GR I V
Sbjct: 81 FICYEDQRSTILAVDNFNGIKIKGRTIRV 109
>gi|226496357|ref|NP_001149007.1| RNA-binding motif protein, X-linked 2 [Zea mays]
gi|195623912|gb|ACG33786.1| RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ G+P +TEG + F+Q+GEVV V +V +K + + G AF+ + + S LAV+N+
Sbjct: 38 VYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAKVLGRIIKV 109
>gi|426258338|ref|XP_004022771.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ovis aries]
Length = 461
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 136 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 195
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 196 NGIKIKGRTIRV 207
>gi|358335067|dbj|GAA28104.2| RNA-binding motif protein X-linked 2 [Clonorchis sinensis]
Length = 314
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL +TEG + FSQ+GEVV + +V +K + G AF+ + + S LA +N+
Sbjct: 39 IFIGGLNFELTEGDIICVFSQYGEVVNINLVRDKKTGISKGFAFLCYEDQRSTVLATDNL 98
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V E
Sbjct: 99 NGIKLAGRIIRVDHVE 114
>gi|242037549|ref|XP_002466169.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
gi|241920023|gb|EER93167.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
Length = 298
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ G+P +TEG + F+Q+GEVV V +V +K + + G AF+ + + S LAV+N+
Sbjct: 38 VYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGAKVLGRIIRV 109
>gi|149745621|ref|XP_001500162.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Equus
caballus]
Length = 327
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|15232729|ref|NP_190296.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
gi|75337070|sp|Q9SD61.1|C3H42_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 42;
Short=AtC3H42
gi|6522593|emb|CAB61958.1| putative RNA binding protein [Arabidopsis thaliana]
gi|27311733|gb|AAO00832.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|34098859|gb|AAQ56812.1| At3g47120 [Arabidopsis thaliana]
gi|332644724|gb|AEE78245.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
Length = 352
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ G+P +TEG + FSQ+GE+V V ++ +K + + G AF+ + + S LAV+N+
Sbjct: 38 VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGALVLGRTIKV 109
>gi|9293999|dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]
Length = 396
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 50 SHPSLQTKCSGSNSSNSTESDTSSR-----TGIFIKGLPESMTEGRVKKAFSQFGEVVQV 104
S SL G ++ +S + D S +FI GL +E ++ AF FGE+V+V
Sbjct: 252 SFESLNKDYEGDSTQDSRDQDDSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEV 311
Query: 105 KIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGK 139
KI+ +K+SK+ G AF+ ++ +E+A A++ MNGK
Sbjct: 312 KIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGK 346
>gi|328782599|ref|XP_003250169.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Apis mellifera]
Length = 331
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+++ I++ GL E + E + AF FGE+V V+I + S++ G AF+ F E A
Sbjct: 41 TNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 100
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
A++NMN +GR I V IA+
Sbjct: 101 AAIDNMNDSELFGRTIRVNIAK 122
>gi|27734072|ref|NP_775552.1| RNA-binding motif protein, X-linked 2 [Mus musculus]
gi|61230302|sp|Q8R0F5.1|RBMX2_MOUSE RecName: Full=RNA-binding motif protein, X-linked 2
gi|20071694|gb|AAH26976.1| RNA binding motif protein, X-linked 2 [Mus musculus]
gi|26345092|dbj|BAC36195.1| unnamed protein product [Mus musculus]
gi|74207503|dbj|BAE40004.1| unnamed protein product [Mus musculus]
Length = 326
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|345807592|ref|XP_549256.3| PREDICTED: RNA-binding motif protein, X-linked 2 [Canis lupus
familiaris]
Length = 336
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP S+TE +++ F QFG+V K+V +++S + G AFV S E + A+E +
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 137 NGKFFYGRFILVKIA 151
NG GR I+V A
Sbjct: 63 NGHELDGRTIVVNKA 77
>gi|295666436|ref|XP_002793768.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277421|gb|EEH32987.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 280
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV------KIAETGLSKN 158
G GR I V + E GL N
Sbjct: 95 GGATILGRMIRVDHVRYKRKEEEGLEDN 122
>gi|405963075|gb|EKC28679.1| ELAV-like protein 2 [Crassostrea gigas]
Length = 502
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 64 SNSTESDTSSR-TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
S + ++D+ S+ I+I +P S E + F QFGE++QV+++ +K + + G FV+
Sbjct: 265 SYARKNDSESKGANIYIANIPRSFGEEELGAHFRQFGEIIQVRLLRDKSTNESKGVGFVY 324
Query: 123 FSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGR 161
++++ A A+E MNGK + + I ++ +GR
Sbjct: 325 YTKRSEAAAALEAMNGKTLLKGYPALSIKFADINARKGR 363
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T + + LP+++++ K+ F + G + KIV +K + G FV + +E A+ A+
Sbjct: 191 TNLIVNYLPQTLSDEDFKELFEKIGPLKSYKIVRDKATNYSYGFGFVDYVNEEDAERAIH 250
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRG 160
MNG+ + I V A S+++G
Sbjct: 251 EMNGQKMDHKTIKVSYARKNDSESKG 276
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+SMT+ ++ F+ GEV K++ +KL+ Q LG FV + R E
Sbjct: 22 SQEESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPED 81
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A+ A+ +NG + I V A
Sbjct: 82 AEKAINTLNGLRLQNKTIKVSYA 104
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/75 (20%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-------------GSAFVWF 123
+++ GLP++MT+ ++ F+ +G ++ +I+ + ++ + G F+ F
Sbjct: 116 LYVSGLPKNMTQQDLENLFNPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRF 175
Query: 124 SRKESADLAVENMNG 138
++ A+ A++ +NG
Sbjct: 176 DQRVEAERAIQELNG 190
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SDT ++I GLP+SMT+ V+ FS+FG ++ +++ ++ + G AF+ F ++
Sbjct: 115 SDTIKDANLYISGLPKSMTQKDVEDMFSRFGRIINSRVLVDQATGASRGVAFIRFDKRAE 174
Query: 129 ADLAVENMNGK 139
A+ AV N+NG+
Sbjct: 175 AEDAVNNLNGQ 185
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
++T + + LP++M++ ++ FS GEV K++ +K++ LG FV + A+
Sbjct: 32 DAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKIAGHSLGYGFVNYVTPSDAER 91
Query: 132 AVENMNG 138
A+ +NG
Sbjct: 92 AINTLNG 98
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 71 TSSRTG--IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
T+S G IFI L + E + + F FG V VK++ + + + G FV S E
Sbjct: 253 TNSNNGWCIFIYNLGQEADETILWQMFGPFGAVTNVKVIRDFTTNKCKGFGFVTMSNYED 312
Query: 129 ADLAVENMNG 138
A +A+ ++NG
Sbjct: 313 AAMAIASLNG 322
>gi|327352804|gb|EGE81661.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 278
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV------KIAETGLSKN 158
G GR I V + E GL N
Sbjct: 95 GGATVLGRMIRVDHVRYKRKEEEGLEDN 122
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL M + ++++F+++GEV++ +I+ ++ + + G F+ F+ E A A+ M
Sbjct: 42 LFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAAAITGM 101
Query: 137 NGKFFYGRFILVKIA 151
+GK +GR + V A
Sbjct: 102 DGKDLHGRLVHVNYA 116
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 20/127 (15%)
Query: 25 AIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPE 84
A+P+ F+S+ + N S+S + ST+ DT+ IF+ L
Sbjct: 18 ALPKTFLSREMKGNWSNS--------------------PAGSTKPDTNKHFHIFVGDLSS 57
Query: 85 SMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGR 144
+ ++++AF+ FGE+ ++V + +++ G FV F RK+ A+ A+ MNG++ GR
Sbjct: 58 DVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAMNGQWLGGR 117
Query: 145 FILVKIA 151
I A
Sbjct: 118 VIRTNWA 124
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
++ GL + ++E ++K FS +G + ++++ +K G AFV F+ KESA A+
Sbjct: 166 VYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKDK------GYAFVRFATKESATHAI 216
>gi|296236404|ref|XP_002763305.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Callithrix
jacchus]
Length = 342
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 117
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 118 NGIKIKGRTIRV 129
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + ++ AF+ FG+VV +++ ++ S +P G FV FS E A+ A++
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRPRGFGFVNFSDDECANEAIK 97
Query: 135 NMNGKFFYGRFILVKIAE 152
M+G+ GR I V IA+
Sbjct: 98 AMDGQELQGRNIRVSIAQ 115
>gi|182888560|ref|NP_001107258.2| RNA-binding motif protein, X-linked 2 [Rattus norvegicus]
gi|374253659|sp|B0BN49.1|RBMX2_RAT RecName: Full=RNA-binding motif protein, X-linked 2
gi|165970686|gb|AAI58685.1| Rbmx2 protein [Rattus norvegicus]
Length = 328
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|388453455|ref|NP_001253777.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|380813648|gb|AFE78698.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|383419077|gb|AFH32752.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|384947606|gb|AFI37408.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|226286984|gb|EEH42497.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 280
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV------KIAETGLSKN 158
G GR I V + E GL N
Sbjct: 95 GGATILGRMIRVDHVRYKRKEEEGLEDN 122
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+GR++ AF FGEVVQ K+++++ + + G FV F+ + S + A++ MN
Sbjct: 10 FVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAIKEMN 69
Query: 138 GKFFYGRFILVKIAET 153
G+ GR I V A++
Sbjct: 70 GQELDGRNITVNQAQS 85
>gi|402911397|ref|XP_003919621.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Papio anubis]
Length = 322
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|375268714|ref|NP_001243518.1| RNA binding motif protein, X-linked 2 [Bos taurus]
gi|296471256|tpg|DAA13371.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 358
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 117
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 118 NGIKIKGRTIRV 129
>gi|301766430|ref|XP_002918652.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ailuropoda
melanoleuca]
Length = 325
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|225683370|gb|EEH21654.1| U2 snRNP component IST3 [Paracoccidioides brasiliensis Pb03]
Length = 280
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV------KIAETGLSKN 158
G GR I V + E GL N
Sbjct: 95 GGATILGRMIRVDHVRYKRKEEEGLEDN 122
>gi|355757697|gb|EHH61222.1| RNA-binding motif protein, X-linked 2 [Macaca fascicularis]
Length = 334
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 50 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 109
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 110 NGIKIKGRTIRV 121
>gi|47222076|emb|CAG12102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 215
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + K F+++G+VV+V IV +K +++ G AFV F +ESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRRSKGVAFVLFLDRESARNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
V +N K +GR + IA + G + RR Y
Sbjct: 68 VRAVNNKQLFGRTVKASIAIDNGRATEFIRRRNY 101
>gi|261202032|ref|XP_002628230.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590327|gb|EEQ72908.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 258
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++EG + FSQ+GE V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV------KIAETGLSKN 158
G GR I V + E GL N
Sbjct: 95 GGATVLGRMIRVDHVRYKRKEEEGLEDN 122
>gi|390352150|ref|XP_791635.3| PREDICTED: RNA-binding motif protein, X-linked 2-like
[Strongylocentrotus purpuratus]
Length = 232
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI G+P +TEG V FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 64 IFIGGMPFELTEGDVLCVFSQYGEIVNINLVRDKKTGKSKGYCFIAYEDQRSTILAVDNF 123
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 124 NGIKLKGRTLRV 135
>gi|157112564|ref|XP_001657567.1| hypothetical protein AaeL_AAEL006197 [Aedes aegypti]
gi|108878012|gb|EAT42237.1| AAEL006197-PA [Aedes aegypti]
Length = 207
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
+S+R+ ++ LP +T V+K F ++G+VV+V I+ +K +++ G AFV FS + AD
Sbjct: 7 SSTRSTVYASSLPFDLTNIDVRKIFEKYGQVVRVTILRDKQTRKSKGVAFVLFSNAKEAD 66
Query: 131 LAVENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
L ++N +GR + V IA + G + +R Y
Sbjct: 67 LCCTSLNNVEMFGRTLKVSIAKDNGKADEFAKRREY 102
>gi|449449318|ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202917 [Cucumis sativus]
gi|449487254|ref|XP_004157539.1| PREDICTED: uncharacterized protein LOC101231083 [Cucumis sativus]
Length = 286
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL +TE +++ AF++FG+++ +I+ EK + +P G F+ FS + D A+ M
Sbjct: 9 IFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREM 68
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
+G+ F R I V AE + ++
Sbjct: 69 HGQEFGERIISVNKAEPKMGED 90
>gi|395835423|ref|XP_003790679.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Otolemur
garnettii]
Length = 331
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|383862957|ref|XP_003706949.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like, partial [Megachile rotundata]
Length = 326
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+++ I++ GL E + E + AF FGE+V V+I + S++ G AF+ F E A
Sbjct: 36 TNTKRTIYVGGLAEEVDEKILHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 95
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
A++NMN +GR I V IA+
Sbjct: 96 TAIDNMNDSELFGRTIRVNIAK 117
>gi|380015375|ref|XP_003691678.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Apis florea]
Length = 293
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+++ I++ GL E + E + AF FGE+V V+I + S++ G AF+ F E A
Sbjct: 3 TNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 62
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
A++NMN +GR I V IA+
Sbjct: 63 AAIDNMNDSELFGRTIRVNIAK 84
>gi|327284806|ref|XP_003227126.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Anolis
carolinensis]
Length = 287
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 VFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|403220621|dbj|BAM38754.1| RNA-binding motif protein, X-linked 2 [Theileria orientalis strain
Shintoku]
Length = 291
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL MTEG + FSQFG+ + + + +K++ + LG F+ + + S LAV+N
Sbjct: 41 IFIGGLDTRMTEGDIIIVFSQFGDPIDINLKRDKITGKSLGYCFLGYRDQRSTILAVDNF 100
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 101 NGSTLLGRRIRV 112
>gi|344286268|ref|XP_003414881.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 401
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GLP +TEG + FSQ+GEVV + +V +K + + G F+ + + S LAV+N
Sbjct: 112 VFLGGLPYELTEGDIICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 171
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 172 NGIKIKGRTIRV 183
>gi|431908562|gb|ELK12156.1| RNA-binding motif protein, X-linked 2 [Pteropus alecto]
Length = 346
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 117
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 118 NGIKIKGRTIRV 129
>gi|281351269|gb|EFB26853.1| hypothetical protein PANDA_007127 [Ailuropoda melanoleuca]
Length = 334
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 47 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 106
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 107 NGIKIKGRTIRV 118
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK L E M + R++ FS+FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDESGKSK-GFGFVSFERHEDARKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
MNGK G+ I V A+ + R ++KF
Sbjct: 250 EMNGKDLNGKQIYVGRAQKKV--ERQTELKHKF 280
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L S+ + FS FG ++ K+V ++ + G FV F +E A+ A+E M
Sbjct: 101 IFVKNLDRSIDSKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEEAERAIEKM 158
Query: 137 NGKFFYGRFILV 148
NG F R + V
Sbjct: 159 NGMFLNDRKVFV 170
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K+ E + G FV FS E A AV M
Sbjct: 306 LYVKNLDDGIDDERLRKEFSPFGTITSAKVTMEGGRSKGFG--FVCFSSPEEATKAVTEM 363
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 364 NGRIVATKPLYVALAQ 379
>gi|397496325|ref|XP_003846130.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pan paniscus]
Length = 350
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 49/75 (65%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI G+ SM E +++AF+++GEVV+ +++ ++ + + G FV F+ E+A A++ +
Sbjct: 42 LFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101
Query: 137 NGKFFYGRFILVKIA 151
+G+ +GR + V A
Sbjct: 102 DGRDLHGRVVKVNYA 116
>gi|373958223|ref|ZP_09618183.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373894823|gb|EHQ30720.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 104
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI LP + E +++ F +GE+ +KI+T+K + Q G F +ESA A+E++
Sbjct: 3 IFIGNLPYKIQESELRELFEDYGELTSLKIITDKQTGQSKGFGFAEMPDRESALKALEDL 62
Query: 137 NGKFFYGRFILVKIAE 152
N YGR I+VK AE
Sbjct: 63 NAAEIYGRNIVVKEAE 78
>gi|432093575|gb|ELK25559.1| RNA-binding motif protein, X-linked 2 [Myotis davidii]
Length = 337
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|93003136|tpd|FAA00151.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 189
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + K F + G+VV+V + K +++ G AFV + +KE A A
Sbjct: 5 SKSTVYVSNLPFSLTNNDLHKIFGKMGKVVKVTVTKNKENRESTGLAFVLYLKKEDAMKA 64
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRYK 166
V M+GK GR + IA + G +K +R YK
Sbjct: 65 VHIMDGKQLLGRKLKCSIAKDNGRTKEFIKRKEYK 99
>gi|443724444|gb|ELU12456.1| hypothetical protein CAPTEDRAFT_172701 [Capitella teleta]
Length = 359
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 52 PSLQTKCSGSNSSNSTESDT-SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEK 110
P++Q ++ + D S+T + + LP+SMT+ ++ FS GEV K++ +K
Sbjct: 4 PTIQQNGGSESAVQVLQRDMKDSKTNLIVNYLPQSMTQDDIRSLFSSIGEVESCKLIRDK 63
Query: 111 LSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
+ Q LG FV + R+E A A+ ++NG + I V +A
Sbjct: 64 ATGQSLGYGFVNYKRQEDASKAITSLNGLRLQNKTIKVSVA 104
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I GLP++MT+ ++ F+ G ++ +I+ ++ + G F+ F ++ A+ A++ +
Sbjct: 116 LYISGLPKNMTQVDLENMFNHCGNIITSRILCDQNTGISKGVGFIRFDQRHEAERAIKML 175
Query: 137 NGKFFYGRF--ILVKIAE 152
NG G I VK A+
Sbjct: 176 NGTIPEGATDPITVKFAQ 193
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 54 LQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSK 113
LQ + G+N+ + + + S +F+ L E + + F FG V VK+V + +
Sbjct: 257 LQQRLVGANNFVAGNAVSGSGYCLFVYNLAPETEENVLWQLFGPFGAVQNVKVVRDYATL 316
Query: 114 QPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
+ G FV + E A +A+ +NG R + V
Sbjct: 317 KCKGFGFVTMTNYEEALMAIHALNGIALGDRVLQV 351
>gi|74227727|dbj|BAE35704.1| unnamed protein product [Mus musculus]
Length = 165
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|255585355|ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 276
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL +TE +++ AF+++G++V+ +++ E+ + +P G F+ FS + S D A+ M
Sbjct: 9 IFVGGLSWDVTERQLENAFNRYGKIVECQVMLERDTGRPRGFGFITFSDRRSMDDAIREM 68
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
+G+ F R I V A+ + +
Sbjct: 69 HGREFGDRVISVNKAQPKMGDD 90
>gi|224067168|ref|XP_002302389.1| predicted protein [Populus trichocarpa]
gi|222844115|gb|EEE81662.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G NS NST + + IF+ GL S+TE + K F QFG V V ++ + L+ +P G
Sbjct: 78 GMNSDNSTSAKNNRTKKIFVGGLASSLTEEQFKNYFEQFGRTVDVVVMQDSLTNRPRGFG 137
Query: 120 FVWFSRKESAD----LAVENMNGK 139
FV F +ES D + +NGK
Sbjct: 138 FVTFDSEESVDKVLLIGSHELNGK 161
>gi|410212532|gb|JAA03485.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410251714|gb|JAA13824.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410308778|gb|JAA32989.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410333627|gb|JAA35760.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
Length = 322
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|119632204|gb|EAX11799.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Homo sapiens]
Length = 321
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 37 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 96
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 97 NGIKIKGRTIRV 108
>gi|109077776|ref|XP_001110036.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKVKGRTIRV 109
>gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens]
Length = 276
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|343887401|ref|NP_001230600.1| RNA binding motif protein, X-linked 2 [Sus scrofa]
Length = 329
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|332226384|ref|XP_003262369.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Nomascus
leucogenys]
Length = 322
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|4929627|gb|AAD34074.1|AF151837_1 CGI-79 protein [Homo sapiens]
Length = 351
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|355715858|gb|AES05425.1| RNA binding motif protein, X-linked 2 [Mustela putorius furo]
Length = 182
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 45 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 104
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 105 NGIKIKGRTIRV 116
>gi|118600973|ref|NP_057108.2| RNA-binding motif protein, X-linked 2 [Homo sapiens]
gi|62512110|sp|Q9Y388.2|RBMX2_HUMAN RecName: Full=RNA-binding motif protein, X-linked 2
gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens]
gi|62020769|gb|AAH33750.1| RNA binding motif protein, X-linked 2 [Homo sapiens]
gi|119632205|gb|EAX11800.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Homo sapiens]
gi|158259171|dbj|BAF85544.1| unnamed protein product [Homo sapiens]
Length = 322
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL +TEG V FSQ+GEVV + + EK + + G AF+ + + S LAV+N+
Sbjct: 34 IFIGGLNYELTEGDVITVFSQYGEVVDIDMPREKSTGKRRGFAFLMYEDQRSTVLAVDNL 93
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 94 NGAELAGRTLRV 105
>gi|355750033|gb|EHH54371.1| hypothetical protein EGM_15194 [Macaca fascicularis]
Length = 310
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKVKGRTIRV 109
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL +TEG V FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 32 IFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTGKSKGFCFIGYEDQRSTILAVDNF 91
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 92 NGIKLCGRSIRV 103
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI L S T+ +K AF +FG V + K+V +K S + G AFV F K+ + A+E+M
Sbjct: 9 CFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIEDM 68
Query: 137 NGKFFYGRFILVKIAE-TGLSKNR 159
NG GR I V A+ G ++R
Sbjct: 69 NGLDLDGRAITVDKAQPQGAGRDR 92
>gi|261330753|emb|CBH13738.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 666
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S+ + R+ +FI GL S+T+ + + FS FG + K++ + + + G AFV F R
Sbjct: 266 SEDAIRSNLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKFVRLCD 325
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
A AVE +NG F G I V++A+ + G T F
Sbjct: 326 AQRAVEALNGSIFCGETITVRVAKPNAAYRPGAPTNKTF 364
>gi|426397384|ref|XP_004064898.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Gorilla gorilla
gorilla]
Length = 322
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + +++AFSQ+GE++ KI+ ++ + + G FV F +ES A+E MN
Sbjct: 9 FVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMN 68
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 69 GKELDGRNITVNEAQS 84
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+ T T ++IK E M E R+ K F +FG + VK++ + + G FV F + E
Sbjct: 284 AQTREFTNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGRSK-GFGFVNFQKHED 342
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSK 157
A A++NMNGK GR I A+ L +
Sbjct: 343 AQNAIDNMNGKELNGRQIYAGRAQKKLER 371
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+K L +S+ + AFS FG ++ K++T+ + G FV F +ESA+ A++ M
Sbjct: 200 VFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNGSK--GYGFVHFEHRESAERAIQKM 257
Query: 137 NG------KFFYGRFILVKIAETGL 155
NG K F G F K E+ L
Sbjct: 258 NGILLNDLKIFVGHFKSRKDRESEL 282
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L + + + ++K FS FG + K++ + G FV FS E A AV M
Sbjct: 395 LYIKNLDDDIDDENLRKEFSSFGTITSAKVMMNNGRSKGFG--FVCFSAPEEATTAVTEM 452
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 453 NGRLVASKPLYVALAQ 468
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N S S+ +++ L +TE + + FS G ++ +++ + ++ + LG A+V F
Sbjct: 100 NVPNSPNSTMASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQ 159
Query: 125 RKESADLAVENMNGKFFYGR 144
A+ + +MN G+
Sbjct: 160 HLADAERVMTDMNLYIIKGK 179
>gi|358368597|dbj|GAA85213.1| RNA binding domain protein [Aspergillus kawachii IFO 4308]
Length = 289
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+D I+I GLP ++EG + FSQ+GE V + +V +K + + G F+ + + S
Sbjct: 27 ADYRDTAYIYIGGLPYDLSEGDIITIFSQYGEPVHINLVRDKETGKSRGFCFLKYEDQRS 86
Query: 129 ADLAVENMNGKFFYGRFILV 148
DLAV+N+ G GR + V
Sbjct: 87 TDLAVDNLGGATVLGRVLRV 106
>gi|356555297|ref|XP_003545970.1| PREDICTED: uncharacterized protein LOC100787464 [Glycine max]
Length = 481
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 29 PFISKALTSNNSSSVSVSR-IYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMT 87
P S L N+S++ VS S L T CS N++ D SRT IF+ + + T
Sbjct: 262 PRSSTRLVKENASTLKVSNGNVSFQYLLTFCS--NAAGRPSEDVDSRT-IFVSNVHFAAT 318
Query: 88 EGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFIL 147
+ + + F++FG+V++V IVT+ + QP G+A+V F RKE+AD A+ +++ F R +
Sbjct: 319 KDGLSRHFNRFGDVLKVIIVTDAATGQPKGAAYVEFMRKEAADNAL-SLDNTSFMSRILK 377
Query: 148 V 148
V
Sbjct: 378 V 378
>gi|321262344|ref|XP_003195891.1| hypothetical protein CGB_H5040W [Cryptococcus gattii WM276]
gi|317462365|gb|ADV24104.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 401
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GLP +TEG + FSQ+GE++ V +V +K + + G F+ + + S LAV+NM
Sbjct: 33 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 92
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRR 162
NG GR + K+ T + +G+R
Sbjct: 93 NGTQVMGRTL--KVDHTRNYRQQGKR 116
>gi|116283305|gb|AAH03676.1| RBMX2 protein [Homo sapiens]
Length = 163
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|111494063|gb|AAI05583.1| RBMX2 protein [Homo sapiens]
Length = 173
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|72393389|ref|XP_847495.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359593|gb|AAX80026.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803525|gb|AAZ13429.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 666
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S+ + R+ +FI GL S+T+ + + FS FG + K++ + + + G AFV F R
Sbjct: 266 SEDAIRSNLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKFVRLCD 325
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
A AVE +NG F G I V++A+ + G T F
Sbjct: 326 AQRAVEALNGSIFCGETITVRVAKPNAAYRPGAPTNKTF 364
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
SN D + + + GL T+ ++ AF ++G + + +++ + S++P G AF
Sbjct: 62 SNRGGRDAGDNNPGNNLHVSGLSNRTTDRDLEDAFGKYGAIERAQVMYDPHSREPRGFAF 121
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSK 157
V F + E A+ A+ MNG F GR I V A G ++
Sbjct: 122 VTFVKAEDAEAAITAMNGTEFLGRKITVDKARRGRAR 158
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 TGIFIKGLP-ESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
T +++ LP +TE + FS G +VQ+ ++ +K++ P G AFV F ++E A A+
Sbjct: 113 TNLYVTNLPSRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAI 172
Query: 134 ENMNGKFFYGRF--ILVKIAE 152
E++NG +GR I VKIAE
Sbjct: 173 EHLNGTIPHGRTNPISVKIAE 193
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D SSRT + I LP+++TE + K F G V KI+ + + G FV + + + A
Sbjct: 22 DDSSRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDA 81
Query: 130 DLAVENMNG 138
A++ +NG
Sbjct: 82 IRAIQTLNG 90
>gi|242015115|ref|XP_002428219.1| RNA recognition motif containing protein, putative [Pediculus
humanus corporis]
gi|212512780|gb|EEB15481.1| RNA recognition motif containing protein, putative [Pediculus
humanus corporis]
Length = 221
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T S++ +++ L S+T + K FS++G+VV+V ++ ++ +++ G AFV F +KE A
Sbjct: 8 TPSKSTVYVSNLSFSLTNNDLHKVFSEYGKVVKVTVMKDRKTRKSKGVAFVLFLKKEDAQ 67
Query: 131 LAVENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+ +NGK +GR + IA + G S RR Y
Sbjct: 68 NCCKMLNGKEMFGRTLKASIASDNGRSAQFIRRRDY 103
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M +GR+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSK-GFGFVSFEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ + V A+ + + + +++
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRKFE 281
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS + A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPDEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 44/83 (53%)
Query: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
+T + + +++ L +TE + + FS G V+ +++ + ++++ LG A+V F +
Sbjct: 2 NTAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 126 KESADLAVENMNGKFFYGRFILV 148
A+ A++ MN G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|300176697|emb|CBK24362.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEK----LSKQPLG 117
N SN +FI L +TE +K FSQFG++ I+ +SK G
Sbjct: 86 NKSNKDRPTLDVGADLFISNLAPDVTEDMIKTTFSQFGQLACEPIIARDPETNISK---G 142
Query: 118 SAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
AFV ++ ES+D +E+MNG++F+GR I+V+ A
Sbjct: 143 HAFVNYTSFESSDFVIESMNGQYFHGRPIVVQYA 176
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL E + E + + F QFG VV V + +K+ + + AF+ + + A+ A
Sbjct: 14 LYVGGLDERVDEELLWELFLQFGPVVSVSMPKDKVLNKHMEFAFIEYQSEIDAEYASHVC 73
Query: 137 NGKFFYGRFILV 148
+ YGR I V
Sbjct: 74 DNITLYGRKIRV 85
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ LP ++E ++ F + GEVV V ++ ++ S +P G FV + ++SA AV N+
Sbjct: 137 LFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKDAVSNL 196
Query: 137 NGKFFYGRFILVKIAETGLSKNR 159
NG GR I V I+E + NR
Sbjct: 197 NGMPLDGREISVSISEDKFAANR 219
>gi|297806401|ref|XP_002871084.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
gi|297316921|gb|EFH47343.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL +TE +++AFS+FG+++ +I+ E+ + + G F+ F+ + + D ++ M
Sbjct: 9 IFVGGLSPEVTERDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREM 68
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+G+ F R I V AE L ++ G
Sbjct: 69 HGRDFGDRVISVNRAEPKLGRDDG 92
>gi|242025166|ref|XP_002432997.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518506|gb|EEB20259.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 211
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
D T +++ LP+++TE + F +G +VQ I+ +K++ P G AFV + +KE
Sbjct: 98 GDDIKDTNLYVTNLPKNITEQELDNIFGPYGFIVQKNILKDKVTGMPRGVAFVRYDKKEE 157
Query: 129 ADLAVENMNGKFFYG--RFILVKIAE 152
A A+ N+NG G I VKIAE
Sbjct: 158 AQAAISNLNGVVPDGATEAIQVKIAE 183
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
N ++D +T + I LP+ MT+ + F G V +++ + + G F
Sbjct: 4 QNQGQGVKNDCDDKTNLIINYLPQHMTDKELYSMFVTIGPVQSCRVMKDFKTGYSYGFGF 63
Query: 121 VWFSRKESADLAVENMNG 138
V + ++E A A+ +NG
Sbjct: 64 VKYCKEEDASRAIGTLNG 81
>gi|126324405|ref|XP_001377748.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 171
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 VFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIRGRTIRV 109
>gi|84999532|ref|XP_954487.1| RNA-binding protein [Theileria annulata]
gi|65305485|emb|CAI73810.1| RNA-binding protein, putative [Theileria annulata]
Length = 292
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL MTEG + FSQFGE + + + +K + + LG F+ + + S LAV+N
Sbjct: 41 IFIGGLDHRMTEGDIIIVFSQFGEPIDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNF 100
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 101 NGSTLLGRRIRV 112
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
ST+ DTS+ IF+ + + +++ FS FG V + KI+ + +++P G FV ++
Sbjct: 104 STQEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVAYAT 163
Query: 126 KESADLAVENMNGKFFYGRFI 146
KE A+ A+ MNGKF R I
Sbjct: 164 KEEAEEALNKMNGKFLGTRQI 184
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+ + S I++ G+ + E ++++F +FG++++V+I EK G AFV F E
Sbjct: 212 ASSESNCTIYVGGITNGLCEELLRESFKEFGDILEVRIFKEK------GYAFVRFDSHEG 265
Query: 129 ADLAVENMNGK 139
A A+ M+GK
Sbjct: 266 ATQAIIRMHGK 276
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL TE + +AFSQ+G+VV+ KIV ++ + G FV ++ ++ A A++
Sbjct: 39 TKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKALD 98
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK GR I V A+
Sbjct: 99 EMNGKALNGRVIYVDYAK 116
>gi|443697654|gb|ELT98021.1| hypothetical protein CAPTEDRAFT_86725, partial [Capitella teleta]
Length = 156
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
L+ +GS +S E S+ ++ GLP +TEG V FSQ+GE+V V ++ +K +
Sbjct: 11 ELELGLAGSGASWHKEFKESAW--VYCGGLPYDLTEGDVVCVFSQYGEIVNVNLIRDKGT 68
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
+ G F+ + + S LAV+N+NG GR I V
Sbjct: 69 GKSKGFCFLCYEDQRSTILAVDNLNGFKILGRTIRV 104
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL T+ +K+AFS FGEV +VKI+ ++ + + G FV F+ + A+ A++ +
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQAL 103
Query: 137 NGKFFYGRFILVKIA 151
+G+ GR I V A
Sbjct: 104 DGRDLAGRTIRVNYA 118
>gi|17532863|ref|NP_496057.1| Protein EXC-7 [Caenorhabditis elegans]
gi|3876753|emb|CAA85327.1| Protein EXC-7 [Caenorhabditis elegans]
Length = 456
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 33 KALTSNNSSSVSVSRIYS-HPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRV 91
+AL + N+++V S + + + S Q CS N S+T + I LP+ MT+ V
Sbjct: 4 EALLTPNNNNVPTSPVQTTYTSTQRYCSAPNVDIG-----ESKTNLIINYLPQGMTQEEV 58
Query: 92 KKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
+ F+ GE+ K+V +K++ Q LG FV + R+E A AV + NG + I V A
Sbjct: 59 RSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYA 118
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+D + +++ G+P+SMT ++ F FG+++ +I+++ ++ G FV F +K+
Sbjct: 122 NDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDE 181
Query: 129 ADLAVENMNGKFFYG--RFILVKIAETGLSKN 158
AD+A++ +NG G I VK A S N
Sbjct: 182 ADVAIKTLNGSIPSGCSEQITVKFANNPASNN 213
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 45 VSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQV 104
V+ + +H L + S S ++ SDT+ +F+ L + + + FSQFG +V V
Sbjct: 346 VAGLAAHAQL-SALSASVAATLPPSDTAGYC-LFVYNLSSDTDDTLLWQLFSQFGAIVNV 403
Query: 105 KIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
KI+ + L++Q G AFV S A A+ ++NG G+ + V
Sbjct: 404 KILRD-LTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L +S+TE ++ FSQFG ++ +IV + + + G AFV + E+AD A+ M
Sbjct: 101 IFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDESKGYAFVSYDNFEAADAAINTM 160
Query: 137 NGKFFYGRFILVKIA 151
NG+FF + I V+ A
Sbjct: 161 NGQFFGSKKINVQYA 175
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL T+ +K+AFS FGEV +VKI+ ++ + + G FV F+ + A+ A++ +
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQAL 103
Query: 137 NGKFFYGRFILVKIA 151
+G+ GR I V A
Sbjct: 104 DGRDLAGRTIRVNYA 118
>gi|15021899|dbj|BAB62225.1| Hu/elav class neuron-specific RNA binding protein [Branchiostoma
belcheri]
Length = 326
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
SGS + S S+T + + LP++MT+ +K FS GEV K++ +K++ Q LG
Sbjct: 7 SGSPDGRTGSSTKDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQSLGY 66
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
FV + + + A+ A+ +NG + I V A
Sbjct: 67 GFVNYVKPQDAEKAINTLNGLRLQAKTIKVSYA 99
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ ++ F G ++ +I+ + ++ Q G FV F ++ A+ A+ +
Sbjct: 111 LYVSGLPKTMTQQDLEGLFEAHGRIITSRILFDPVTGQSRGVGFVRFDQRVEAERAITEL 170
Query: 137 NG 138
NG
Sbjct: 171 NG 172
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L + + + F FG V VK++ + + + G FV + + A +A+ +
Sbjct: 245 IFVYNLAPDTEDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFVTMAHYDEAVVAIAQL 304
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
NG GR + V KN
Sbjct: 305 NGYCLGGRVLQVSFKTNKAHKN 326
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGKS-KGFGFVSFEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ + V A+ + +
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVER 272
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS + A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSK--GFGFVCFSSPDEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL T+ ++++AFS FG++V K+VT++ + + G AFV +S + A+ A E M
Sbjct: 42 LFISGLSRLTTDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEM 101
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 102 NAKFLDGWVIFVDPAK 117
>gi|168033388|ref|XP_001769197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679462|gb|EDQ65909.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL +E VKKAF +FGEVV VKIV ++ S + G FV F+ SA +A+ +M
Sbjct: 7 VYVGGLSYESSEDTVKKAFMEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMAIRDM 66
Query: 137 NGKFFYGRFILV 148
+G GR I V
Sbjct: 67 DGGQIEGRTIRV 78
>gi|346467825|gb|AEO33757.1| hypothetical protein [Amblyomma maculatum]
Length = 306
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+S+ +++ GL E + E + AF FG++V V+I + +++ G AFV F + E A
Sbjct: 3 TTSKRMVYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETQKHRGFAFVEFEQAEDAA 62
Query: 131 LAVENMNGKFFYGRFILVKIA 151
A++NMN +GR I V IA
Sbjct: 63 AAIDNMNDSELFGRTIRVNIA 83
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M+ R+++ FS FG+ + VK++T+ + + G FV F + + A AVE
Sbjct: 191 TNVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNIGRS-KGFGFVNFEKHQDAQKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
+MNGK GR + V A+ + +
Sbjct: 250 DMNGKEINGRMLYVGRAQKRMER 272
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS +G + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVSTKPLYVALAQ 369
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F E+A+ A+ M
Sbjct: 101 IFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSR--GYGFVHFETHEAANRAIATM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|303272303|ref|XP_003055513.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463487|gb|EEH60765.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 104
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F GL +TEG V FSQ+GE+V V +V + + + G AF+ + + S LAV+N+
Sbjct: 22 VFAGGLSFDLTEGDVLAVFSQYGEIVDVNLVRHEDTGKSRGFAFICYEDQRSTVLAVDNL 81
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V E
Sbjct: 82 NGAKVLGRIIKVDHVE 97
>gi|71032247|ref|XP_765765.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352722|gb|EAN33482.1| RNA-binding protein, putative [Theileria parva]
Length = 310
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL MTEG + FSQFGE + + + +K + + LG F+ + + S LAV+N
Sbjct: 41 IFIGGLDHRMTEGDIIIVFSQFGEPIDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNF 100
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 101 NGSTLLGRRIRV 112
>gi|403221389|dbj|BAM39522.1| nucleolar phosphoprotein [Theileria orientalis strain Shintoku]
Length = 194
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
++R I++ LP+ +TE +KK F QFG+VV+++++ K + + G AFV F E A +
Sbjct: 10 NNRDIIYVGNLPKELTEQHLKKYFDQFGDVVKIRLMKSKKTNRSKGYAFVQFENSEIAQI 69
Query: 132 AVENMNGKFFYGRFILVKIAE 152
A E M+ G+ + V + +
Sbjct: 70 AAETMDKYLIDGKALKVHVKD 90
>gi|126339500|ref|XP_001362144.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRALNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|330864692|ref|NP_001193477.1| RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 330
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI G+ SM E +++AF+++GEVV +++ ++ + + G FV F+ E+A A++ +
Sbjct: 42 LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101
Query: 137 NGKFFYGRFILVKIA 151
+G+ +GR + V A
Sbjct: 102 DGRDLHGRVVKVNYA 116
>gi|21553602|gb|AAM62695.1| glycine-rich RNA-binding protein-like [Arabidopsis thaliana]
Length = 337
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP +TE V++ FS +G V+ VKIV ++ S + FV FS + SAD A+E+M
Sbjct: 9 VYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDR-SVRGKCYGFVTFSNRRSADDAIEDM 67
Query: 137 NGKFFYGRFILV 148
+GK GR + V
Sbjct: 68 DGKSIGGRAVRV 79
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL +TEG V FSQ+GE++ + + EK + +P G AFV + + S LAV+N+
Sbjct: 34 IFVGGLNRELTEGDVITIFSQYGEIMDINMPREKETGKPKGFAFVMYEDQRSTVLAVDNL 93
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 94 NGSKVAERTLRV 105
>gi|449304345|gb|EMD00352.1| hypothetical protein BAUCODRAFT_28706 [Baudoinia compniacensis UAMH
10762]
Length = 304
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 57 KCSGSNSSNSTE-SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQP 115
KC N+S T+ DT+ I+I GLP ++EG V FSQ+G V + +V +K + +
Sbjct: 17 KCVPPNASWHTDYRDTAY---IYIGGLPFELSEGDVLTIFSQYGNPVHINLVRDKETGKS 73
Query: 116 LGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
G AF+ + + S DLAV+N++G GR I V
Sbjct: 74 KGFAFLKYEDQRSCDLAVDNLSGAGVMGRVISV 106
>gi|18420085|ref|NP_568388.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260444|gb|AAM13120.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
gi|28059296|gb|AAO30045.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
gi|332005391|gb|AED92774.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 337
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP +TE V++ FS +G V+ VKIV ++ S + FV FS + SAD A+E+M
Sbjct: 9 VYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDR-SVRGKCYGFVTFSNRRSADDAIEDM 67
Query: 137 NGKFFYGRFILV 148
+GK GR + V
Sbjct: 68 DGKSIGGRAVRV 79
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ ++K AF +FG++ + K+V +K S + G FV F K++ D A++ M
Sbjct: 9 CFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAM 68
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 69 NGMDLDGRTITV 80
>gi|332028166|gb|EGI68217.1| Peptidyl-prolyl cis-trans isomerase E [Acromyrmex echinatior]
Length = 293
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S + RT I++ GL E + E + AF FGE+V V+I + S++ G AF+ F E
Sbjct: 2 SGNTKRT-IYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFETAED 60
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A A++NMN +GR I V IA+
Sbjct: 61 AAAAIDNMNDSELFGRTIRVNIAK 84
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + ++ AF+ FGEVV K++ ++ + +P G FV FS + +A A+
Sbjct: 36 TKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAIS 95
Query: 135 NMNGKFFYGRFILVKIA 151
M+GK GR I V A
Sbjct: 96 EMDGKDLNGRNIRVNPA 112
>gi|340546033|gb|AEK51815.1| cytoplasmic poly(A) binding protein 1 [Ichthyophis bannanicus]
Length = 177
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 88 TNVYIKNFGDDMDDERLKEMFSKYGKTLSVKVMTDSTGKSK-GFGFVSFEKHEDANKAVE 146
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ + V A+
Sbjct: 147 EMNGKDVNGKMVFVGRAQ 164
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 80 KGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG- 138
K L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E MNG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKMNGM 58
Query: 139 -----KFFYGRF 145
K F GRF
Sbjct: 59 LLNDRKVFVGRF 70
>gi|302765773|ref|XP_002966307.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
gi|300165727|gb|EFJ32334.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
Length = 289
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
S +T +++ GL +TE ++ F +FGE+ +VKI+ + Q G F+ F+ E+A+
Sbjct: 4 SDQTSVYVGGLAYDVTEDLIRSTFEEFGEIDKVKIIQDH-DGQSRGYGFITFATSEAANG 62
Query: 132 AVENMNGKFFYGRFILVKIAETGLSKNRG 160
A+ MNGK GR I V KNRG
Sbjct: 63 AIYGMNGKVVAGRSIRVNEV-----KNRG 86
>gi|296470918|tpg|DAA13033.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 417
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 125 IFLGGLPYELTEGDIICVFSQYGEIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNF 184
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 185 NGIKIKGRTIRV 196
>gi|340387228|ref|XP_003392109.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Amphimedon queenslandica]
Length = 123
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL +TEG V FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 32 IFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTGKSKGFCFIGYEDQRSTILAVDNF 91
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 92 NGIKVCGRSIRV 103
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F++ LP + TE +++ FS+FG V QV +V K +K+ G A+V F+ ESA A+E +
Sbjct: 231 LFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEEL 290
Query: 137 NGKFFYGRFILV 148
+ F GR + V
Sbjct: 291 DNSIFQGRLLHV 302
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 67 TESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRK 126
+ D SS T + ++ + TE +++ FS FG++ +++ + S + G AFV F K
Sbjct: 639 VDKDKSS-TKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEFVTK 695
Query: 127 ESADLAVENMNGKFFYGRFILVKIAETGLSKNRGR-RTRYKF 167
+ A A++ ++ YGR ++++ A+ G S R RT +F
Sbjct: 696 QEAQNALQALSSTHLYGRHLVMERAKEGESLEELRARTAAQF 737
>gi|395538109|ref|XP_003771028.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Sarcophilus harrisii]
Length = 217
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRALNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + +++AFSQFGE+++ KI+ ++ + + G FV FS ++S A+E MN
Sbjct: 11 FVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
G+ GR I V A++
Sbjct: 71 GQNLDGRNITVNEAQS 86
>gi|15237666|ref|NP_196048.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260152|gb|AAM12974.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|21387121|gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332003340|gb|AED90723.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 310
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 51/84 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL +T+ +++AFS+FG+++ +I+ E+ + + G F+ F+ + + D ++ M
Sbjct: 9 IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREM 68
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+G+ F R I V AE L ++ G
Sbjct: 69 HGRDFGDRVISVNRAEPKLGRDDG 92
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 62 NSSNSTESDTSSRTG-----------IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEK 110
N+ N+ E D S++ +FI GL MTEG V FSQ+GE++ V + +K
Sbjct: 8 NAINARELDLGSQSASWHDQYKDSAYVFIGGLHVDMTEGDVITIFSQYGEIMDVNLPRDK 67
Query: 111 LSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVK 149
+ + G F+ + + S LAV+N+NG GR + V
Sbjct: 68 TTGKQRGFGFLMYEDQRSTVLAVDNLNGAQVLGRTLRVD 106
>gi|307189573|gb|EFN73937.1| Peptidyl-prolyl cis-trans isomerase E [Camponotus floridanus]
Length = 293
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S + RT I++ GL E + E + AF FGE+V V+I + S++ G AF+ F E
Sbjct: 2 SGNTKRT-IYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFEMAED 60
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A A++NMN +GR I V IA+
Sbjct: 61 AAAAIDNMNDSELFGRTIRVNIAK 84
>gi|189191842|ref|XP_001932260.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973866|gb|EDU41365.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 296
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G N S +D I+I GLP ++EG + FSQ+GE V +K+ ++ + + G
Sbjct: 17 AGINPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
A++ + + S DLAV+N+ G R I V A
Sbjct: 77 AWIKYEDQRSCDLAVDNLGGANIMDRIIRVDHA 109
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GLP +TEG + FSQ+GE++ V +V +K + + G F+ + + S LAV+NM
Sbjct: 162 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 221
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRR 162
NG GR +K+ T + +G+R
Sbjct: 222 NGTQIIGR--TLKVDHTRNYRQQGKR 245
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
T +++ LP ++TE ++ + FS++G +VQ I+ +KL+ P G AFV F ++E A A+
Sbjct: 180 ETNLYVTNLPRNITESQIDELFSKYGNIVQKNILRDKLTGLPRGVAFVRFDKREEAQEAI 239
Query: 134 ENMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 240 ARLHGTIPEGGSEPLSVKIAE 260
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL T+ ++K+AFS FG++++ K++T+++S + G FV ++ E A+ A E M
Sbjct: 36 LFVSGLSRLTTDEKLKEAFSPFGQLLEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREGM 95
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 96 NAKFLDGWVIFVDPAK 111
>gi|256087425|ref|XP_002579870.1| rna recognition motif containing protein [Schistosoma mansoni]
Length = 279
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GL +TEG V FSQ+GE+V + +V +K + G AFV + + S LA +N+
Sbjct: 60 IYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNL 119
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V E
Sbjct: 120 NGIKLGGRIIRVDHVE 135
>gi|72062514|ref|XP_796219.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Strongylocentrotus purpuratus]
Length = 233
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP ++T +++ F +FG+V +V IV +K +++ G AFV F ++SA +
Sbjct: 8 SKSTVYVSNLPFTLTNNDLQQIFGRFGQVARVTIVKDKETRKSKGLAFVLFVERDSAYKS 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
++++NG+ +GR V IA + G + + RR Y
Sbjct: 68 IKSLNGRELFGRKWKVSIADDNGRAADFIRRRNY 101
>gi|345315508|ref|XP_001517482.2| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ornithorhynchus anatinus]
Length = 217
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKGKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRTLNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|328698189|ref|XP_001949636.2| PREDICTED: hypothetical protein LOC100169481 [Acyrthosiphon pisum]
Length = 297
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP ++EG + FSQ+GE+ + +V +K + + G FV + + S LAV+N
Sbjct: 36 IFVGGLPYDLSEGDIMSIFSQYGEITNLNLVRDKDTGKQKGFCFVCYEDQRSTILAVDNF 95
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 96 NGTRVLGRILRV 107
>gi|296484918|tpg|DAA27033.1| TPA: zinc finger CCHC-type and RNA binding motif 1-like [Bos
taurus]
Length = 217
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAELIRRRNY 101
>gi|392579140|gb|EIW72267.1| hypothetical protein TREMEDRAFT_24060, partial [Tremella
mesenterica DSM 1558]
Length = 111
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL MTEG V FSQ+GEVV + + +K + + G F+ + + S LAV+NM
Sbjct: 32 VFIGGLSYEMTEGDVIIVFSQWGEVVDINLPRDKETGKTRGFGFLMYEDQRSTVLAVDNM 91
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 92 NGAQILGRTIRV 103
>gi|327272940|ref|XP_003221242.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Anolis carolinensis]
Length = 216
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRALNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
T +++ LP ++TE ++ FS++G +VQ I+ +KL+ P G AFV F ++E A A+
Sbjct: 170 ETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAI 229
Query: 134 ENMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 230 ARLHGTIPEGGSEPLSVKIAE 250
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 8 PSPFSSLLLGSRQHTKTAIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNST 67
P P +S L+ S Q + P + + ++ + + T
Sbjct: 25 PEPHNSQLVASNQELQNQTPNQKVDQEF-------AKMTDQREQQPQPQQQQQAQQQQQT 77
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
+ + RT + I LP+SMTE + F G V +++ + + G FV +++ E
Sbjct: 78 KGNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAE 137
Query: 128 SADLAVENMNG 138
A A+ +NG
Sbjct: 138 DAATAISTLNG 148
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 358 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVD 416
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 417 EMNGKELNGKQIYVGRAQKKVERQ 440
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 268 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 325
Query: 137 NG------KFFYGRFILVKIAETGL 155
NG K F GRF K E L
Sbjct: 326 NGMLLNDRKVFVGRFKSRKEREAEL 350
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 463 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 520
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 521 NGRIVATKPLYVALAQ 536
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ S G FV F R E A AVE
Sbjct: 260 TNVYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTDE-SGTSKGFGFVNFERHEDAQKAVE 318
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRR 162
MNGK G+ I V G ++ +G R
Sbjct: 319 EMNGKELNGKKIYV-----GRAQKKGER 341
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +++A+ A++ M
Sbjct: 170 IFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSK--GYGFVHFETRDAAERAIDKM 227
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 228 NGMLLNDRKVFVGRF 242
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 365 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 422
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 423 NGRIVATKPLYIALAQ 438
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F++ LP + TE +++ FS+FG V QV +V K +K+ G A+V F+ ESA A+E +
Sbjct: 447 LFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEEL 506
Query: 137 NGKFFYGRFILV 148
+ F GR + V
Sbjct: 507 DNSIFQGRLLHV 518
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I +K LP+ + E R++ FSQ GE+ K++ K K AF+ F ++ A+ A++
Sbjct: 121 ICVKNLPKYVAEDRLRDHFSQKGEITDAKLMRTKEGK-SRQFAFIGFRTEQEAEEALKFF 179
Query: 137 NGKFFYGRFILVKIA 151
N + I +IA
Sbjct: 180 NNSYLDTCRITCEIA 194
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 67 TESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRK 126
+ D SS T + ++ + TE +++ FS FG++ +++ + S + G AFV F K
Sbjct: 855 VDKDKSS-TKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEFVTK 911
Query: 127 ESADLAVENMNGKFFYGRFILVKIAETGLS 156
+ A A++ ++ YGR ++++ A+ G S
Sbjct: 912 QEAQNALQALSSTHLYGRHLVMERAKEGES 941
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 127 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVD 185
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 186 EMNGKELNGKQIYVGRAQKKVER 208
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 37 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 94
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 95 NGMLLNDRKVFVGRF 109
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 232 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 289
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 290 NGRIVATKPLYVALAQ 305
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 52 PSLQTKCSGS-NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEK 110
P++ +K SG N++ T S ++T + I LP +M++ V+ FS GEV K+V EK
Sbjct: 96 PTVTSKNSGPVNNTAVTNSPPENKTNLIINYLPPNMSQEEVRALFSSIGEVESCKLVREK 155
Query: 111 LSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
S + LG AFV F A A++ +NG + + V +A
Sbjct: 156 TSGESLGYAFVKFYDPLDAGKAIKTLNGLRLQNKTVKVSLA 196
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I GLP MT+ ++K FS G ++ +I+ + + G AF+ + ++ A+ A+ +
Sbjct: 208 LYICGLPRKMTQPELEKLFSACGHIITARILYDTKTGLSRGVAFIRYDQRTEAEAAIRKL 267
Query: 137 NGKFFYG--RFILVKIAETGLSKNRGRRTRYKF 167
NG G I VK A + S NR F
Sbjct: 268 NGYLPPGASEPITVKFANS-PSSNRAENMNLGF 299
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + ++ + G FV S E A LA+ ++
Sbjct: 532 IFVYNLAPDTEESTLWQLFGPFGAVQTVKVIRDPITSKCKGFGFVTMSNYEEALLAIHSL 591
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
NG R + V T SK+
Sbjct: 592 NGFNLGNRVLQVSFKTTPNSKH 613
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL +TE +++ AF +FG++V+ +++ E+ + +P G F+ F+ + + D A+ M
Sbjct: 5 IFVGGLSWDITERQLENAFDRFGKIVECQVMLERDTGRPRGFGFITFADRRAMDDAIREM 64
Query: 137 NGKFFYGRFILVKIAE---TGLSKNRGRRTRY 165
+G+ F R I V A+ G + G R Y
Sbjct: 65 HGRDFGDRVISVNKAQPKMGGDDSDHGYRGGY 96
>gi|126310751|ref|XP_001371554.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRALNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|449468384|ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
gi|449522522|ref|XP_004168275.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 145
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 52 PSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKL 111
P L +C S S++ S S +F+ GL SM E +K AFS FGEV +V+IV +K
Sbjct: 21 PFLGFRCFCSQSTSPLSSSPSPNNKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKD 80
Query: 112 SKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRG 160
S + G FV F+ A A + M+GK GR + + A L K RG
Sbjct: 81 SGRSRGFGFVNFANGNDAQCAKDAMDGKAVLGRPLRISFA---LDKVRG 126
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 211 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVD 269
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 270 EMNGKELNGKQIYVGRAQKKVERQ 293
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 121 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 178
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 179 NGMLLNDRKVFVGRF 193
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 316 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 373
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 374 NGRIVATKPLYVALAQ 389
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 169 NALNGLRLQNKTIKVSIA 186
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 40/62 (64%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ G F+ F ++ AD A++ +
Sbjct: 198 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKEL 257
Query: 137 NG 138
NG
Sbjct: 258 NG 259
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 358 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 418 NGYTLGNRVLQV 429
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I L TE V+ F+Q G V +V ++ +K++ + G FV S KE AD AV+N+
Sbjct: 4 LYIGNLSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQNL 63
Query: 137 NGKFFYGRFILVKIA 151
NGK + GR + V A
Sbjct: 64 NGKQWQGRALTVNEA 78
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++I L S+T+ +K AF +FG V K+VT++ S++ G FV F + E A A+E
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 135 NMNGKFFYGRFILVKIA 151
MN + GR I V ++
Sbjct: 62 EMNEQELEGRRIKVDVS 78
>gi|312072049|ref|XP_003138888.1| hypothetical protein LOAG_03303 [Loa loa]
gi|307765946|gb|EFO25180.1| hypothetical protein LOAG_03303 [Loa loa]
Length = 312
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 63 SSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
SS S S+ I++ GLP + EG V FSQ+GE+V + ++ ++ + + G AFV
Sbjct: 26 SSKSWHQKYSNSAWIYVGGLPFDLNEGDVIAVFSQYGEIVNINLIRDRKTGKSRGFAFVC 85
Query: 123 FSRKESADLAVENMNGKFFYGRFILVKIAE 152
+ + S LAV+N NG R I V E
Sbjct: 86 YEDQRSTILAVDNFNGIKLLKRIIRVDHVE 115
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ +K+AF +FG +V+ K+V +K S + G FV F K++ D A++ M
Sbjct: 9 CFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGMDLDGRSITVDKAQ 84
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L ++E + K F+ FGEV+ KI+T++ + Q G FV F+ KE+A+ A++ +
Sbjct: 3 LYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKEL 62
Query: 137 NGKFFYGRFILVKIA 151
NG F GR I+V A
Sbjct: 63 NGSNFEGRSIVVNEA 77
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 97 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 156
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 157 NALNGLRLQNKTIKVSIA 174
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 186 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAQGLSKGVGFIRFDQRFEADR 245
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 246 AIKELNG 252
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 351 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 410
Query: 137 NGKFFYGRFI 146
NG R +
Sbjct: 411 NGYTLGNRVL 420
>gi|360044342|emb|CCD81889.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 258
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GL +TEG V FSQ+GE+V + +V +K + G AFV + + S LA +N+
Sbjct: 39 IYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNL 98
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V E
Sbjct: 99 NGIKLGGRIIRVDHVE 114
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
T +++ LP ++TE ++ FS++G +VQ I+ +KL+ P G AFV F ++E A A+
Sbjct: 170 ETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAI 229
Query: 134 ENMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 230 ARLHGTIPEGGSEPLSVKIAE 250
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 67 TESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRK 126
T+ + RT + I LP+SMTE + F G V +++ + + G FV +++
Sbjct: 77 TKGNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKA 136
Query: 127 ESADLAVENMNG 138
E A A+ +NG
Sbjct: 137 EDAATAISTLNG 148
>gi|255544232|ref|XP_002513178.1| poly-A binding protein, putative [Ricinus communis]
gi|223547676|gb|EEF49169.1| poly-A binding protein, putative [Ricinus communis]
Length = 514
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 39 NSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQF 98
N+ V+ S LQ+ GS ++ D SRT IF+ + + T+ + + F++F
Sbjct: 305 NAKPVADMHKESQKPLQS-APGSYATGRPLEDADSRT-IFVSNVHFAATKDSLSRHFNKF 362
Query: 99 GEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
G+V++V I+ + + QP+GSA++ F RKE+AD A+ +++G F R + V
Sbjct: 363 GDVLKVVIMADAATGQPMGSAYIEFMRKEAADNAL-SLDGTSFMSRILKV 411
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 123 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 182
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 183 NALNGLRLQNKTIKVSIA 200
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 212 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADR 271
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 272 AIKELNG 278
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
TSS IF+ L E + + F FG V VK++ + S + G FV + E A
Sbjct: 371 TSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAV 430
Query: 131 LAVENMNGKFFYGRFI 146
LA++++NG R +
Sbjct: 431 LAIQSLNGYTLGNRVL 446
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + ++ AF+ FG+VV +++ ++ S + G FV FS ESA+ A++
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 135 NMNGKFFYGRFILVKIAE 152
M+G+ GR I V IA+
Sbjct: 98 AMDGQELQGRNIRVSIAQ 115
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + ++ AF+ FG+VV +++ ++ S + G FV FS ESA+ A++
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 135 NMNGKFFYGRFILVKIAE 152
M+G+ GR I V IA+
Sbjct: 98 AMDGQELQGRNIRVSIAQ 115
>gi|342837655|tpg|DAA34917.1| TPA_inf: embryonic lethal abnormal vision 1-like protein [Schmidtea
mediterranea]
Length = 466
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%)
Query: 63 SSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
S++S + ++T + + LP +MT+ V+ F+ GEV K+V +K + + LG AFV
Sbjct: 91 SNDSLNMNCENKTNLIVNYLPPNMTQEEVRALFTSIGEVESCKLVRDKTTGESLGYAFVK 150
Query: 123 FSRKESADLAVENMNGKFFYGRFILVKIA 151
F R A+ A++ +NG + I V +A
Sbjct: 151 FVRPNDAEKAIKTLNGLRLQNKTIKVSLA 179
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 41/64 (64%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I GLP+ MT+ +++ FSQ G+++ +I+ + + G AF+ F ++ A++A++ +
Sbjct: 191 LYICGLPKKMTQVELEEQFSQCGKIITARILYDNKTGLSRGVAFIRFDQRCEAEMAIKKL 250
Query: 137 NGKF 140
NG
Sbjct: 251 NGHM 254
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VKIV + + + G FV S E A L+++++
Sbjct: 357 IFVYNLSPETEEATLWQLFGPFGAVQTVKIVRDSTTNKCKGFGFVTMSNYEEALLSIQSL 416
Query: 137 NGKFFYGRFIL 147
NG F G +L
Sbjct: 417 NG-FALGNRVL 426
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
T +++ LP ++TE ++ FS++G +VQ I+ +KL+ P G AFV F ++E A A+
Sbjct: 170 ETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAI 229
Query: 134 ENMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 230 ARLHGTIPEGGSEPLSVKIAE 250
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 67 TESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRK 126
T+ + RT + I LP+SMTE + F G V +++ + + G FV +++
Sbjct: 77 TKGNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKA 136
Query: 127 ESADLAVENMNG 138
E A A+ +NG
Sbjct: 137 EDAATAISTLNG 148
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL T+ ++K AF+ FG++++ K++T+++S + G FV ++ E A+ A + M
Sbjct: 69 LFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQEM 128
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 129 NAKFLDGWVIFVDPAK 144
>gi|351695842|gb|EHA98760.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 709
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 281 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVD 339
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 340 EMNGKELNGKQIYVGRAQKKVERQ 363
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 191 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 248
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 249 NGMLLNDRKVFVGRF 263
>gi|396499970|ref|XP_003845608.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
gi|312222189|emb|CBY02129.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
Length = 325
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G N S +D I+I GLP ++EG + FSQ+GE V +K+ +K + + G
Sbjct: 17 AGINPEASWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
A++ + + S DLAV+N+ G R I V A
Sbjct: 77 AWIKYEDQRSCDLAVDNLGGATIMDRVIRVDHA 109
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSK-GFGFVSFEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ + V A+ + + + R++
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRRFE 281
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + T +++AF +FGEVV ++VT+++S G FV ++ E A +E
Sbjct: 51 TNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIE 110
Query: 135 NMNGKFFYGRFILVKIA 151
M+GKF G I + A
Sbjct: 111 GMDGKFLEGWVIFAEYA 127
>gi|367034235|ref|XP_003666400.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
gi|347013672|gb|AEO61155.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
Length = 347
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G + S +D I+ GLP +TEG V FSQFGE V +K+V +K + + G
Sbjct: 17 NGVSPEASWHADYRDTAFIYFGGLPYELTEGDVITIFSQFGEPVFLKLVRDKETGKSKGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
++ + + S DLAV+N+ G GR I V A
Sbjct: 77 GWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHA 109
>gi|297808057|ref|XP_002871912.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297317749|gb|EFH48171.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 335
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP +TE V++ FS +G ++ VKIV ++ S + FV FS + SAD A+E+M
Sbjct: 9 VYVGGLPYDITEEAVRRVFSIYGTILTVKIVNDR-SVRGKCYGFVTFSNRRSADDAIEDM 67
Query: 137 NGKFFYGRFILV 148
+GK GR + V
Sbjct: 68 DGKSIGGRAVRV 79
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + ++ AF+ FG+VV +++ ++ S + G FV FS ESA+ A++
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 135 NMNGKFFYGRFILVKIAE 152
M+G+ GR I V IA+
Sbjct: 98 AMDGQELQGRNIRVSIAQ 115
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++TE ++ + FS++G +VQ I+ +KL+ P G AFV F ++E A A+
Sbjct: 115 TNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAIA 174
Query: 135 NMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 175 RLHGTIPEGGSEPLSVKIAE 194
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + +++AFSQFGE+++ KI+ ++ + + G FV FS ++S A+E MN
Sbjct: 11 FVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMN 70
Query: 138 GKFFYGRFILVKIAE 152
G+ GR I V A+
Sbjct: 71 GQNLDGRNITVNEAQ 85
>gi|403269360|ref|XP_003926714.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Saimiri boliviensis boliviensis]
Length = 217
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|18490399|gb|AAH22543.1| Zinc finger CCHC-type and RNA binding motif 1 [Homo sapiens]
gi|123982552|gb|ABM83017.1| zinc finger CCHC-type and RNA binding motif 1 [synthetic construct]
gi|123997217|gb|ABM86210.1| zinc finger CCHC-type and RNA binding motif 1 [synthetic construct]
Length = 217
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|431930897|ref|YP_007243943.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829200|gb|AGA90313.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 90
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP ++ + +++ FS+FGEV QV ++ ++L+ + G FV S AD A++ +
Sbjct: 3 IYVGNLPYNVKDADLRETFSRFGEVSQVTVIMDRLTGESKGFGFVEMSSNSQADAAIKGL 62
Query: 137 NGKFFYGRFILVKIAE-TGLSKNRGRR 162
NG GR I V A+ S +RG+R
Sbjct: 63 NGTDLNGRNITVNQAKPKSDSSSRGKR 89
>gi|342319853|gb|EGU11798.1| RNA-binding protein Cwf29 [Rhodotorula glutinis ATCC 204091]
Length = 300
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I + GLP ++TEG V FSQ+GE+V + + + + +P G A++ ++ + S LAV+N+
Sbjct: 33 INVGGLPYNLTEGDVITIFSQYGEIVDINMPRDPQTGKPRGFAWLMYADQRSTVLAVDNL 92
Query: 137 NGKFFYGRFILVK 149
NG GR + V
Sbjct: 93 NGAQVLGRTLRVD 105
>gi|193678935|ref|XP_001949378.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Acyrthosiphon pisum]
Length = 226
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S+ +++ LP ++T + K F ++G++V+V IV +K ++Q G AFV F + A++
Sbjct: 7 SKCTVYVSNLPFNLTNNDLHKVFEKYGKLVKVTIVKDKTTRQSKGVAFVLFLNQNEANIC 66
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
V++ NG +GR + IA + G S R+ +Y
Sbjct: 67 VKSTNGIQMFGRTLKSSIAVDNGRSTEFIRKRQY 100
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD SRT +FI +P M + ++ F+ +G+++ ++ + LG+AFV ++ E
Sbjct: 109 SDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGNSLGTAFVRYATTEE 168
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A A+E M+GK GR I V+ A+
Sbjct: 169 AMRAIEGMSGKRIGGRAIAVQWAK 192
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + ++ AF+ FG+VV +++ ++ S + G FV FS ESA+ A++
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 135 NMNGKFFYGRFILVKIAE 152
M+G+ GR I V IA+
Sbjct: 98 AMDGQELQGRNIRVSIAQ 115
>gi|426372226|ref|XP_004053029.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|426372228|ref|XP_004053030.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Gorilla gorilla gorilla]
Length = 217
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + ++ AF+ FG+VV +++ ++ S + G FV FS ESA+ A++
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 135 NMNGKFFYGRFILVKIAE 152
M+G+ GR I V IA+
Sbjct: 98 AMDGQELQGRNIRVTIAQ 115
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + +++AFSQFGE+ KI+ ++ + + G FV FS ES A+E MN
Sbjct: 8 FVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAIEGMN 67
Query: 138 GKFFYGRFILVKIAE 152
G+ GR I V A+
Sbjct: 68 GQDLDGRNITVNEAQ 82
>gi|452848098|gb|EME50030.1| hypothetical protein DOTSEDRAFT_122130, partial [Dothistroma
septosporum NZE10]
Length = 114
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 57 KCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL 116
KC N+S T D ++I GLP ++EG + FSQ+G V + +V +K + +
Sbjct: 17 KCVPLNASWHT--DYRDTAYVYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKETGKSK 74
Query: 117 GSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
G F+ + + S DLAV+N++G GR + V
Sbjct: 75 GFCFIKYEDQRSCDLAVDNLSGAGVMGRVMSV 106
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+KGL S TE ++ +AFSQ+G+V++ IV + + G +V F+++E A A M
Sbjct: 71 IFVKGLAFSTTEDKLAEAFSQYGKVLKADIVLNRAKTRSKGFGYVTFAKEEDAQKAQIGM 130
Query: 137 NGKFFYGRFILVKI 150
N K +GR + V +
Sbjct: 131 NRKILHGRVLYVDM 144
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 48/76 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL +TE +++ AF +FG++V+ +++ E+ + +P G F+ F+ + + D A+ M
Sbjct: 9 IFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRAMDDAIREM 68
Query: 137 NGKFFYGRFILVKIAE 152
+G+ F R I V A+
Sbjct: 69 HGRDFGDRVISVNKAQ 84
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T R+++ F++FGEVV ++VT+++S G FV ++ E A +E M
Sbjct: 51 LFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGM 110
Query: 137 NGKFFYGRFILVKIA 151
+GKF G I + A
Sbjct: 111 DGKFLDGWVIFAEYA 125
>gi|407860731|gb|EKG07463.1| hypothetical protein TCSYLVIO_001404 [Trypanosoma cruzi]
Length = 601
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
NS + + R+ +F+ GL S+T+ + K F FGE+ K++ + + + G AFV
Sbjct: 224 NSQSRRDPQDEIRSNLFVSGLHASVTDNELYKHFHLFGEIESAKVMLDIHTGKSRGIAFV 283
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
F +A+ A E MN F+G I V++A+ + G T F
Sbjct: 284 KFKEVANAEKAAEEMNNSVFHGETIAVRVAKPHAAYRPGAPTNKTF 329
>gi|195998405|ref|XP_002109071.1| hypothetical protein TRIADDRAFT_35408 [Trichoplax adhaerens]
gi|190589847|gb|EDV29869.1| hypothetical protein TRIADDRAFT_35408, partial [Trichoplax
adhaerens]
Length = 216
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
SR+ +++ LP SMT + K F + G++V+V I+ K +++ G AF+ F + SA A
Sbjct: 8 SRSTVYVSNLPFSMTNNDIHKLFCKHGKIVKVTIMKNKETRESKGVAFILFLERPSALAA 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
VE +N GR I IA + G + + +R Y
Sbjct: 68 VEALNNTEVIGRTIKCSIAHDNGRASDYIKRKNY 101
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 227 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVD 285
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 286 EMNGKELNGKQIYVGRAQKKVERQ 309
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 137 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 194
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 195 NGMLLNDRKVFVGRF 209
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 332 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 389
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 390 NGRIVATKPLYVALAQ 405
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF GL +TEG V FSQ+GE++ V + +K + +P G AFV + + S LAV+N+
Sbjct: 33 IFAGGLNTELTEGDVITIFSQYGEIMDVNMPRDKETGKPKGFAFVMYEDQRSTVLAVDNL 92
Query: 137 NGKFFYGRFILV 148
NG R I V
Sbjct: 93 NGAKILERTIRV 104
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 154 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVD 212
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 213 EMNGKELNGKQIYVGRAQKKVER 235
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 64 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 121
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 122 NGMLLNDRKVFVGRF 136
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 259 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 316
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 317 NGRIVATKPLYVALAQ 332
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 101 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 160
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 161 NALNGLRLQNKTIKVSIA 178
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 190 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADR 249
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 250 AIKELNG 256
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
TSS IF+ L E + + F FG V VK++ + S + G FV + E A
Sbjct: 349 TSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAV 408
Query: 131 LAVENMNGKFFYGRFI 146
LA++++NG R +
Sbjct: 409 LAIQSLNGYTLGNRVL 424
>gi|51243065|ref|NP_149105.3| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Homo sapiens]
gi|114645274|ref|XP_001167603.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 4 [Pan troglodytes]
gi|397510820|ref|XP_003825785.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Pan paniscus]
gi|397510822|ref|XP_003825786.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Pan paniscus]
gi|410046827|ref|XP_003952268.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Pan troglodytes]
gi|158931154|sp|Q8TBF4.2|ZCRB1_HUMAN RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein; Short=U11/U12-31K
gi|14211667|dbj|BAB56132.1| ZCRB1 protein [Homo sapiens]
gi|48427638|tpg|DAA05498.1| TPA_exp: U11/U12 snRNP 31K [Homo sapiens]
gi|119578246|gb|EAW57842.1| zinc finger CCHC-type and RNA binding motif 1, isoform CRA_a [Homo
sapiens]
gi|119578247|gb|EAW57843.1| zinc finger CCHC-type and RNA binding motif 1, isoform CRA_a [Homo
sapiens]
gi|261861064|dbj|BAI47054.1| zinc finger CCHC-type and RNA binding motif containing protein 1
[synthetic construct]
gi|410209170|gb|JAA01804.1| zinc finger CCHC-type and RNA binding motif 1 [Pan troglodytes]
gi|410248970|gb|JAA12452.1| zinc finger CCHC-type and RNA binding motif 1 [Pan troglodytes]
gi|410294196|gb|JAA25698.1| zinc finger CCHC-type and RNA binding motif 1 [Pan troglodytes]
gi|410336591|gb|JAA37242.1| zinc finger CCHC-type and RNA binding motif 1 [Pan troglodytes]
Length = 217
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
+T ++T + + LP+++TE +K+ FSQFG V+ K++ +K S LG FV + E A
Sbjct: 19 ETKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSAEEA 78
Query: 130 DLAVENMNG 138
+ A++ MNG
Sbjct: 79 EHAIQKMNG 87
>gi|332375218|gb|AEE62750.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
DT+ + +++ GL E + E +K AF FG++V ++I + S++ G AF+ F E A
Sbjct: 3 DTNKKI-VYVGGLAEEICEEVLKAAFIPFGDIVDIQIPLDYESEKHRGFAFIEFETSEDA 61
Query: 130 DLAVENMNGKFFYGRFILVKIA 151
AV+NMN +GR I V +A
Sbjct: 62 GAAVDNMNDAELFGRTIRVNLA 83
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL S+ E +K AFS FG+V +V+IV +K S + G FV FS +++A A + M
Sbjct: 38 LFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDAM 97
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+GK GR + + A L K RG
Sbjct: 98 DGKALLGRPLRINFA---LEKPRG 118
>gi|351713220|gb|EHB16139.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Heterocephalus glaber]
Length = 264
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 54 LQTKCSGSNSSNSTESDTS-SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
L+ +C+G+ + S++ +++ LP S+T + + FS++G+VV+V I+ +K +
Sbjct: 99 LKPRCAGAAVPEEMSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDT 158
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
++ G AF+ F K+SA +N K +GR I IA + G + RR Y
Sbjct: 159 RKSKGVAFILFLDKDSAQNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 212
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 118 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 177
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 178 NALNGLRLQNKTIKVSIA 195
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 207 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAPGLSKGVGFIRFDQRFEADR 266
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 267 AIKELNG 273
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 372 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 431
Query: 137 NGKFFYGRFI 146
NG R +
Sbjct: 432 NGYTLGNRVL 441
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 57 KCSGSNS---SNS--TESDTSSR-TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEK 110
+C S+S SNS ESD ++ T + I LP++MT+ V FS GE+ K+V +K
Sbjct: 61 QCYASSSMLPSNSPILESDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDK 120
Query: 111 LSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
++ Q LG FV + R+E A AV ++NG + I V A
Sbjct: 121 VTGQSLGYGFVNYVRQEDAYKAVTSLNGLRLQNKTIKVSFA 161
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL ++M++ ++ F FG+++ +I+++ ++ G FV F RK A+ A++ +
Sbjct: 173 LYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIDKL 232
Query: 137 NGKFFYG 143
NGK G
Sbjct: 233 NGKIPAG 239
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 237 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 295
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 296 EMNGKELNGKQIYVGRAQKKVER 318
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 147 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 204
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 205 NGMLLNDRKVFVGRF 219
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 342 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 399
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 400 NGRIVATKPLYVALAQ 415
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 30 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 87
Query: 137 NGKFF 141
NG
Sbjct: 88 NGMLL 92
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ ++K F +FG++++ K+V +K S + G FV F K++ D A++ M
Sbjct: 9 CFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGMDLDGRTITVDRAQ 84
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVER 272
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ + +
Sbjct: 73 NFDVIKGKPVRI 84
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V +K+ +K + + G A++ + + S DLAV+N+
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G R I V A
Sbjct: 95 GGASIMDRIIRVDHA 109
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I+IK E+M + R+ + F+++G + VK++T+ + G FV F E A AV+
Sbjct: 225 TNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDCGRSK-GFGFVSFQSHEDAQAAVD 283
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
+MNGK G+ I V A+ K R R+T K
Sbjct: 284 DMNGKQLNGKQIYVGRAQ----KKRERQTELK 311
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+K L +S+ + FS FG ++ K+++++ + G FV F +ESA A+E M
Sbjct: 135 VFVKNLEKSIDNKALYDTFSTFGRILSCKVISDENGSK--GYGFVHFETQESAGKAIEKM 192
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 193 NGMLLNNLKVFVGRF 207
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++K FS FG + K++ E + G FV FS + A A M
Sbjct: 330 LYIKNLDDTINDEHLRKEFSPFGTITSAKVMMENGRSKGFG--FVCFSSSKDAAKASREM 387
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
NGK + + V +A+ + + +Y +
Sbjct: 388 NGKLVASKPLYVSLAQRKEERRMHLKNQYMY 418
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
GS+ ++ S T+S +++ L +TE + + FS G ++ +++ + +++ LG A
Sbjct: 33 GSHGHSTPNSPTAS---LYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYA 89
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTR 164
+V F + A+ + MN G I + ++ ++ G+R R
Sbjct: 90 YVNFQHRAHAEWVLATMNLDVIKGNPIRIMWSQ----RDPGQRKR 130
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 161 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 219
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
NGK G+ I V A+ + +
Sbjct: 220 NGKELNGKHIYVGRAQKKVERQ 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 264 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 321
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 322 NGRIVATKPLYVALAQ 337
>gi|349931692|dbj|GAA40288.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 941
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D +++T + + LP M++ VK FS GEV K+V EK + + LG AFV + R A
Sbjct: 357 DNANKTNLIVNYLPPFMSQEEVKALFSSIGEVESCKLVREKATGESLGYAFVKYIRAADA 416
Query: 130 DLAVENMNGKFFYGRFILVKIA 151
+ A+ +NG + I V +A
Sbjct: 417 EKAIRTLNGLRLQNKTIKVSLA 438
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I GLP+ MT+ ++ F Q G ++ +I+ + + G AF+ F ++ A+LA+ +
Sbjct: 450 LYICGLPKKMTQTELEDLFKQCGRIITARILYDNKTGLSRGVAFIRFDQRHEAELAIRRL 509
Query: 137 NG 138
NG
Sbjct: 510 NG 511
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VKI+ + S + G FV S E A LA+ ++
Sbjct: 649 IFVYNLAPETEEANLWQLFGPFGAVQTVKIIRDPTSNKCKGFGFVTMSNYEEALLAIHSL 708
Query: 137 NGKFFYGRFILVKIAETGLSKNR 159
NG R + V T SK R
Sbjct: 709 NGFALGNRVLQVSFKTTPNSKLR 731
>gi|119358437|ref|YP_913081.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119355786|gb|ABL66657.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP +TE ++ AFSQFG+V I+T+K S + G FV + A A+E+M
Sbjct: 3 IYIGNLPYQVTEDDLRDAFSQFGQVDSANIITDKFSGRSKGFGFVDMPHDDEAREAIESM 62
Query: 137 NGKFFYGRFILV 148
N K GR I V
Sbjct: 63 NDKDLKGRTIKV 74
>gi|410918793|ref|XP_003972869.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Takifugu rubripes]
Length = 216
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + K F+++G+VV+V IV +K +++ G AFV F +ESA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRRSKGVAFVLFLDRESARNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
V +N K + R + IA + G + RR Y
Sbjct: 68 VRAINNKQLFSRTVKASIAIDNGRATEFIRRRNY 101
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL TE +++AFS FG+V++ ++VTE+ + + G FV FS +AD A+ M
Sbjct: 9 IFVGGLSWDTTERTLERAFSDFGKVIETQVVTERDTGRSRGFGFVTFSEPRAADAAIREM 68
Query: 137 NGKFFYGRFILVKIAE 152
+ GR I V A+
Sbjct: 69 HNGELDGRTISVNKAQ 84
>gi|429328603|gb|AFZ80363.1| hypothetical protein BEWA_032160 [Babesia equi]
Length = 291
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 41 SSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGE 100
+++S + S LQT G +S ++ D+ I+I GL + MTEG + FSQFGE
Sbjct: 8 ANISAIQRLSELELQTGAIGESSWHNRYKDSCY---IYIGGLDKRMTEGDIIIVFSQFGE 64
Query: 101 VVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVK 149
+ + + + + LG F+ + + S LAV+N NG GR I V
Sbjct: 65 PIDINLKRNGKTGESLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVD 113
>gi|307176221|gb|EFN65860.1| Sex-lethal-like protein [Camponotus floridanus]
Length = 272
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++TE ++ + FS++G +VQ I+ +KL+ P G AFV F ++E A A+
Sbjct: 76 TNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAIA 135
Query: 135 NMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 136 QLHGTIPEGGSEPLSVKIAE 155
>gi|306922392|ref|NP_001182450.1| zinc finger CCHC-type and RNA binding motif 1 [Macaca mulatta]
gi|296211431|ref|XP_002752407.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Callithrix jacchus]
gi|332206508|ref|XP_003252335.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Nomascus leucogenys]
gi|402885675|ref|XP_003906274.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Papio anubis]
gi|402885677|ref|XP_003906275.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Papio anubis]
gi|441632478|ref|XP_004089692.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Nomascus leucogenys]
gi|380783333|gb|AFE63542.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Macaca mulatta]
gi|383422349|gb|AFH34388.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Macaca mulatta]
gi|384949990|gb|AFI38600.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Macaca mulatta]
Length = 217
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AFS FGE++ KI+ ++ + + G FV F+ +ES A+E MN
Sbjct: 7 FVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAIEGMN 66
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 67 GKELDGRSITVNQAQS 82
>gi|344276873|ref|XP_003410230.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 303
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP +TEG + FSQ+GE+V + +V + + + G F+ + + S LAV+N
Sbjct: 38 IFLGGLPYELTEGDILCVFSQYGEIVNINLVRNRKTGKSKGFCFICYEDQRSTVLAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|297691580|ref|XP_002823157.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Pongo abelii]
gi|297691582|ref|XP_002823158.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Pongo abelii]
Length = 217
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ ++K F +FG++++ K+V +K S + G FV F K++ D A++ M
Sbjct: 9 CFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGIDLDGRTITVDRAQ 84
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVER 272
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ + +
Sbjct: 73 NFDVIKGKPVRI 84
>gi|301772778|ref|XP_002921809.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ailuropoda melanoleuca]
gi|281341848|gb|EFB17432.1| hypothetical protein PANDA_010724 [Ailuropoda melanoleuca]
Length = 217
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
SN + + ++ +F+ +P +TE +K+ FS+ G VV ++VT++ + +P G F +
Sbjct: 2 SNKSRASSAKERSVFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEY 61
Query: 124 SRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
+ +A A+ N+NG GR + V A+ G R R+
Sbjct: 62 ADGATALSAMRNLNGYEINGRNLRVDFADGGDKSGGADRKRHD 104
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G N S +D I+I GLP ++EG + FSQ+GE V +K+ ++ + + G
Sbjct: 17 AGINPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
A++ + + S DLAV+N+ G R I V A
Sbjct: 77 AWIKYEDQRSCDLAVDNLGGANIMDRIIRVDHA 109
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL E +K AFSQ G ++QVK++ ++ + G FV F+ ++ A A+ M
Sbjct: 126 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 185
Query: 137 NGKFFYGRFILVKIAETG 154
G+ GR I V A +G
Sbjct: 186 GGEVIDGRNIRVHYANSG 203
>gi|357617301|gb|EHJ70708.1| putative peptidyl-prolyl cis-trans isomerase E [Danaus plexippus]
Length = 303
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S +S+ I++ GL E + E + AF FG++V V+I + S++ G AF+ F E
Sbjct: 3 SKPNSKRTIYVGGLAEEVDEKILNAAFIPFGDLVDVQIPLDYESEKHRGFAFIEFENAED 62
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A A++NMN +GR I V IA
Sbjct: 63 AAAAIDNMNDSELFGRTIRVNIA 85
>gi|395841539|ref|XP_003793592.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Otolemur garnettii]
Length = 217
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRMIKASIAIDNGRAAEFIRRRNY 101
>gi|359478318|ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|296084274|emb|CBI24662.3| unnamed protein product [Vitis vinifera]
Length = 108
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 81 GLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKF 140
GL E +K AF Q+GE+++VK++ + +S + G FV F+ + A +A++ M+G+
Sbjct: 35 GLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQS 94
Query: 141 FYGRFILVKIAETG 154
GR I V A G
Sbjct: 95 LDGRNIRVTYAHKG 108
>gi|198438021|ref|XP_002129706.1| PREDICTED: similar to cold inducible RNA binding protein [Ciona
intestinalis]
Length = 469
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL +E ++KAF FG++ QV ++ ++ + G AF+ F ++SAD A+ M
Sbjct: 10 IFIGGLDLDCSEQDLEKAFGMFGDISQVMVLRDRETNVSRGFAFMSFESQDSADEAIRRM 69
Query: 137 NGKFFYGRFILVKIAE 152
+G GR + V+ AE
Sbjct: 70 HGVEIMGRCVTVRKAE 85
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 55 QTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQ 114
QT+C S S +S +F+ GL S+ +K+AFS FG+V +V IV +K S +
Sbjct: 22 QTQCRFYCSPPSH----ASSNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGR 77
Query: 115 PLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRG 160
G FV FS ++ A A + M+GK GR + + A L K RG
Sbjct: 78 SRGFGFVIFSNEDDAKCAKDAMDGKALLGRPLRINFA---LEKARG 120
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKHIYVGRAQKKVER 272
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGTLLNDRKVFVGRF 173
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL T+ + +AFSQ+G+V++ +V +++S + G FV F+ + A A+
Sbjct: 35 TKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALS 94
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK GR I V A+
Sbjct: 95 EMNGKPLNGRVIFVNYAK 112
>gi|255080758|ref|XP_002503952.1| predicted protein [Micromonas sp. RCC299]
gi|226519219|gb|ACO65210.1| predicted protein [Micromonas sp. RCC299]
Length = 90
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF GL +TEG + FSQ+GE+V V +V + + + G AF+ + + S LAV+N+
Sbjct: 12 IFAGGLSFDLTEGDILAVFSQYGEIVDVNLVRNEETGKSRGFAFICYEDQRSTVLAVDNL 71
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V+ E
Sbjct: 72 NGAKVLGRTIKVEHVE 87
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVER 272
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|426232956|ref|XP_004010483.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ovis aries]
Length = 217
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|70778746|ref|NP_001020489.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Bos taurus]
gi|426224667|ref|XP_004006490.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Ovis aries]
gi|426247121|ref|XP_004017335.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ovis aries]
gi|75069805|sp|Q56JZ7.1|ZCRB1_BOVIN RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|58760376|gb|AAW82098.1| MADP-1 protein-like [Bos taurus]
gi|296487721|tpg|DAA29834.1| TPA: zinc finger CCHC-type and RNA-binding motif-containing protein
1 [Bos taurus]
Length = 217
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 16 LGSRQHTKTA---IPRPFI--SKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESD 70
LGS H IP ++ S A+ N++ + +Y H L G++ +NST
Sbjct: 188 LGSNGHGMPGYYPIPPSYMDASGAMIPNSAHMIYRQPVYMHQHL----GGNDPTNST--- 240
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG--SAFVWFSRKES 128
IFI LP +MT ++K F FGE+V KI P G FV F ++S
Sbjct: 241 ------IFIGALPATMTNDDLRKHFLPFGEIVYTKI--------PFGKRCGFVQFIHRQS 286
Query: 129 ADLAVENMNGKFFYG 143
A++A++ M+GK G
Sbjct: 287 AEMAIQEMDGKVIGG 301
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AFSQ+GE++ KI+ ++ + + G FV F +ES A+E MN
Sbjct: 9 FVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMN 68
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 69 GKELDGRSITVNEAQS 84
>gi|260821286|ref|XP_002605964.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
gi|229291301|gb|EEN61974.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
Length = 330
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
GS + S S+T + + LP++MT+ +K FS GEV K++ +K++ Q LG
Sbjct: 12 GSPDGRTGSSTEDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQSLGYG 71
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
FV + + + A+ A+ +NG + I V A
Sbjct: 72 FVNYVKPQDAEKAINTLNGLRLQAKTIKVSYA 103
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ ++ F G ++ +I+ + ++ Q G FV F ++ A+ A+ +
Sbjct: 115 LYVSGLPKTMTQQDLEGLFEAHGRIITSRILFDPVTGQSRGVGFVRFDQRVEAERAITEL 174
Query: 137 NG 138
NG
Sbjct: 175 NG 176
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L + + + F FG V VK++ + + + G FV + + A +A+ +
Sbjct: 249 IFVYNLAPDTEDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFVTMAHYDEAVVAIAQL 308
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
NG GR + V KN
Sbjct: 309 NGYCLGGRVLQVSFKTNKAHKN 330
>gi|156376506|ref|XP_001630401.1| predicted protein [Nematostella vectensis]
gi|156217421|gb|EDO38338.1| predicted protein [Nematostella vectensis]
Length = 215
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + K F ++G+VV+V I+ +K +++ G AF+ F ++SA A
Sbjct: 8 SKSTVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNA 67
Query: 133 VENMNGKFFYGRFILVKIAETGLSKNRGR 161
V +N K +GR I IA K+ GR
Sbjct: 68 VAAVNKKQMFGRTIKCTIA-----KDNGR 91
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL T+ ++K AF+ FG++++ K++T+++S + G FV ++ E A+ A + M
Sbjct: 69 LFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQEM 128
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 129 NAKFLDGWVIFVDPAK 144
>gi|159474400|ref|XP_001695313.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158275796|gb|EDP01571.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 133
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF GL +TEG + F+QFGEVV + ++ +K S + G AFV + + S LA +N
Sbjct: 38 IFAGGLDYDLTEGDLLAVFAQFGEVVDLNLIRDKDSGKSKGFAFVAYEDQRSTVLATDNF 97
Query: 137 NGKFFYGRFILVK 149
NG GR I V+
Sbjct: 98 NGAKVAGRTIRVE 110
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + T ++++ F++FGEVV ++VT+++S G FV ++ E A ++
Sbjct: 44 TNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKGIQ 103
Query: 135 NMNGKFFYGRFILVKIAET 153
M+GKF G I + A++
Sbjct: 104 GMDGKFLDGWVIFAEYAKS 122
>gi|299748212|ref|XP_001837545.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
gi|298407867|gb|EAU84461.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL +TEG V FSQ+GE++ + + +K + +P G AF+ + + S LAV+N+
Sbjct: 33 IFVGGLHNDLTEGDVITIFSQYGEIMDINMPRDKETGKPRGFAFLMYEDQRSTILAVDNL 92
Query: 137 NGKFFYGRFILVK 149
NG R + V
Sbjct: 93 NGAKVLERTLRVD 105
>gi|431901430|gb|ELK08456.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Pteropus alecto]
Length = 217
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|348510833|ref|XP_003442949.1| PREDICTED: ELAV-like protein 1-like [Oreochromis niloticus]
Length = 341
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 46/71 (64%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SDT ++I GLP++MT+ V+ FS++G ++ +++ ++ + G AF+ F ++
Sbjct: 115 SDTIKDANLYISGLPKNMTQKDVEDMFSRYGRIINSRVLVDQGTGSSRGVAFIRFDKRAE 174
Query: 129 ADLAVENMNGK 139
A+ AV+N+NG+
Sbjct: 175 AEEAVKNLNGQ 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
++T + + LP++MT+ ++ FS GEV K++ +K++ LG FV + A+
Sbjct: 32 DAKTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAER 91
Query: 132 AVENMNG 138
A+ +NG
Sbjct: 92 AISTLNG 98
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
GS S +++S IFI L + E + + F FG V VK++ + + + G
Sbjct: 244 GSMGGVSVPGNSTSGWCIFIYNLGQDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFG 303
Query: 120 FVWFSRKESADLAVENMNG 138
FV + E A +A+ ++NG
Sbjct: 304 FVTMTNYEEAAMAIASLNG 322
>gi|307108981|gb|EFN57220.1| hypothetical protein CHLNCDRAFT_14185, partial [Chlorella
variabilis]
Length = 116
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F GLP +TEG + F+Q+GEVV V +V +K + + G AF+ + + S LAV+N+
Sbjct: 38 VFSGGLPFELTEGDLLAVFAQYGEVVDVHLVRDKKTGKSRGFAFLAYEDQRSTVLAVDNL 97
Query: 137 NGKFFYGRFILVK 149
G GR I V+
Sbjct: 98 GGARVAGRVIRVE 110
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
+NS+ ST + ++I L + + +G + + F QFG V+ ++V + + + LG F
Sbjct: 87 ANSTPSTGDELDVGAKLYIGNLSQDVNDGNLLQTFRQFGNVLHARVVVDPATGKSLGHGF 146
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKIA 151
V + ++AD A + MNG++F G+ I V A
Sbjct: 147 VAYDSFDAADKAKKAMNGEYFGGQPITVSYA 177
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D + +F+ + E +TE + + F Q G VV V I ++++ + G AFV F ++
Sbjct: 7 DQNKDCTLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDC 66
Query: 130 DLAVENMNGKFFYG 143
A+ M G +G
Sbjct: 67 MYALSVMQGVKLFG 80
>gi|116283271|gb|AAH05099.1| ZCRB1 protein [Homo sapiens]
Length = 141
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|33873902|gb|AAH10177.1| ZCRB1 protein [Homo sapiens]
Length = 140
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 112 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 171
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 172 NALNGLRLQNKTIKVSIA 189
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 40/62 (64%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ ++ FS FG+++ +I+ + ++ G F+ F ++ AD A++ +
Sbjct: 201 LYVSGLPKNMTQSDLESLFSPFGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKEL 260
Query: 137 NG 138
NG
Sbjct: 261 NG 262
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
TSS IF+ L E + + F FG V VK++ + S + G FV + E A
Sbjct: 355 TSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAV 414
Query: 131 LAVENMNGKFFYGRFI 146
LA++++NG R +
Sbjct: 415 LAIQSLNGYTLGNRVL 430
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL T+ + +AFSQ+G+V++ +V +++S + G FV F+ + A A+
Sbjct: 35 TKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALS 94
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK GR I V A+
Sbjct: 95 EMNGKPLNGRVIFVNYAK 112
>gi|241149709|ref|XP_002406178.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
gi|215493819|gb|EEC03460.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
Length = 292
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
+SS+ +++ GL E + E + AF FG+VV V+I + +++ G AFV F + E A
Sbjct: 3 SSSKRIVYVGGLAEEVDEKVLHAAFIPFGDVVDVQIPLDYETEKHRGFAFVEFEQAEDAV 62
Query: 131 LAVENMNGKFFYGRFILVKIA 151
A++NMN +GR I V +A
Sbjct: 63 AAIDNMNDSELFGRTIRVNVA 83
>gi|357457685|ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355488171|gb|AES69374.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 685
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 39 NSSSVSVSRIYSHPSLQTKCS------GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVK 92
N+ +S + P +Q + S GS+ + D SRT IF+ + + T+ +
Sbjct: 470 NALKISNGNVNLAPDVQKESSKAHCTPGSSVAGRPTEDVDSRT-IFVSNVHFAATKDALS 528
Query: 93 KAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
+ F++FGEV++V IVT+ + QP G+A+V F KE+AD A+ +++G F R + V
Sbjct: 529 RHFNKFGEVLKVIIVTDAATGQPKGAAYVEFMLKEAADNAL-SLDGTSFMSRILKV 583
>gi|321474055|gb|EFX85021.1| hypothetical protein DAPPUDRAFT_194198 [Daphnia pulex]
Length = 247
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GLP ++EG + FSQ+GEV + +V +K++ + G F+ + + S LAV+N+
Sbjct: 38 IFIGGLPYELSEGDIICIFSQYGEVANINLVRDKVTGKSKGFCFLCYEDQRSTILAVDNL 97
Query: 137 NGKFFYGRFILVKIAE 152
N GR + V E
Sbjct: 98 NSIKVCGRTLRVDHVE 113
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 62/112 (55%)
Query: 48 IYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIV 107
+ H +L + + S+S + T +F+ GL + + ++++AFS FG+V + +++
Sbjct: 10 LLRHSALASGVAASSSPAVFNAARLMSTKLFVGGLSWGVDDMKLREAFSGFGDVTEARVI 69
Query: 108 TEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
T++ + + G FV ++ ++A+ A+ M+GK GR + V IA + NR
Sbjct: 70 TDRDTGKSRGFGFVNYTSSDAANAAISGMDGKEIDGRPVRVNIANDRPAGNR 121
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + +G +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSK-GFGFVSYEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 250 EMNGKEMSGKAIFVGRAQ 267
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++++ FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVMKGKPIRI 84
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 169 NALNGLRLQNKTIKVSIA 186
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 40/62 (64%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ G F+ F ++ AD A++ +
Sbjct: 198 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKEL 257
Query: 137 NG 138
NG
Sbjct: 258 NG 259
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 358 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 137 NGKFFYGRFI 146
NG R +
Sbjct: 418 NGYTLGNRVL 427
>gi|449272006|gb|EMC82136.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Columba livia]
Length = 216
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP ++T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRALNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|50728210|ref|XP_416034.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Gallus gallus]
Length = 216
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP ++T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRALNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|326911410|ref|XP_003202052.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Meleagris gallopavo]
Length = 216
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP ++T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRALNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|198416260|ref|XP_002128081.1| PREDICTED: similar to zinc finger protein [Ciona intestinalis]
Length = 211
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + K F + G+V +V + K ++ G AFV + +KE A A
Sbjct: 8 SKSTVYVSNLPFSLTNNDLHKIFGKMGKVAKVTVTKNKEDRESTGLAFVLYLKKEDAMKA 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRYK 166
V M+GK GR + IA + G +K +R YK
Sbjct: 68 VHIMDGKQLLGRKLKCSIAKDNGRTKEFIKRKEYK 102
>gi|71414344|ref|XP_809277.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70873635|gb|EAN87426.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 601
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
NS + + R+ +F+ GL S+T+ + K F +GE+ K++ + + + G AFV
Sbjct: 224 NSQSRRDPQDEIRSNLFVSGLHASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGIAFV 283
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
F +A+ A E MN F+G I V++A+ + G T F
Sbjct: 284 KFKEVANAEKAAEEMNNSVFHGETIAVRVAKPHAAYRPGAPTNKTF 329
>gi|291401141|ref|XP_002716956.1| PREDICTED: zinc finger CCHC-type and RNA binding motif 1-like
[Oryctolagus cuniculus]
Length = 217
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|168006572|ref|XP_001755983.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692913|gb|EDQ79268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 234
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GL +TEG V F+Q+GEVV V +V +K + + G AF+ + + S LAV+N+
Sbjct: 38 IYVGGLSFGLTEGDVLAVFAQYGEVVDVNLVRDKATGKSKGFAFLAYEDQRSTVLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG R I V
Sbjct: 98 NGARVDSRIIKV 109
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + +K+AFS FG++V+ K++T++ S + G AFV ++ E A+ A E M
Sbjct: 35 LFVSGLSRLTKDENLKEAFSSFGQLVEAKVITDRASGRSKGFAFVTYTTIEEAERAREGM 94
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 95 NAKFLDGWVIFVDPAK 110
>gi|67972060|dbj|BAE02372.1| unnamed protein product [Macaca fascicularis]
Length = 151
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|71407577|ref|XP_806247.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869937|gb|EAN84396.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 601
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
NS + + R+ +F+ GL S+T+ + K F +GE+ K++ + + + G AFV
Sbjct: 224 NSQSRRDPQDEIRSNLFVSGLHASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGIAFV 283
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
F +A+ A E MN F+G I V++A+ + G T F
Sbjct: 284 KFKEVANAEKAAEEMNNSVFHGETIAVRVAKPHAAYRPGAPTNKTF 329
>gi|81673115|gb|AAI09900.1| ZCRB1 protein [Bos taurus]
Length = 139
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|406859423|gb|EKD12489.1| RNA binding domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 304
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG V FSQFGE + ++ +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFELSEGDVVTIFSQFGEPTYINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGTVIMGRTLKV 106
>gi|156058602|ref|XP_001595224.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980]
gi|154701100|gb|EDO00839.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 269
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG V FSQ+GE + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFELSEGDVLTIFSQYGEPTYINLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGAVIAGRTLKV 106
>gi|124248380|gb|ABM92810.1| IP15810p [Drosophila melanogaster]
Length = 647
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 312 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 371
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 372 NALNGLRLQNKTIKVSIA 389
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 401 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADR 460
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 461 AIKELNG 467
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 566 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 625
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 626 NGYTLGNRVLQV 637
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + +G +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 120 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSK-GFGFVSYEKHEDANKAVE 178
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 179 EMNGKEMSGKAIFVGRAQKKVERQ 202
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L ES+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 30 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 87
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 88 NGMLLNDRKVFVGRF 102
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++++ FS FG + K++ E + G FV FS E A AV M
Sbjct: 225 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 282
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 283 NGRIVGSKPLYVALAQ 298
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL E +K AFSQ G ++QVK++ ++ + G FV F+ ++ A A+ M
Sbjct: 39 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 98
Query: 137 NGKFFYGRFILVKIAETG 154
G+ GR I V A +G
Sbjct: 99 GGEVIDGRNIRVHYANSG 116
>gi|154303176|ref|XP_001551996.1| hypothetical protein BC1G_09608 [Botryotinia fuckeliana B05.10]
Length = 195
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G + S S +D I+I GLP ++EG + FSQ+GE + ++ +K + + G
Sbjct: 17 NGVSPSASWHTDYRDTAYIYIGGLPFELSEGDILTIFSQYGEPTYINLIRDKETGKSKGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILV 148
AF+ + + S DLAV+N+ G GR + V
Sbjct: 77 AFLKYEDQRSTDLAVDNLGGAVIAGRTLKV 106
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + +G +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSK-GFGFVSYEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 250 EMNGKEMSGKAIFVGRAQ 267
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVMKGKPIRI 84
>gi|348580279|ref|XP_003475906.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cavia porcellus]
Length = 215
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|343427687|emb|CBQ71214.1| related to Transformer-2 protein homolog [Sporisorium reilianum
SRZ2]
Length = 341
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
++ D++ + + GL + T+ +++AF ++G + + +++ + S++P G AFV F
Sbjct: 62 ADRDNGDSNPGNNLHVSGLSKGTTDRDLEEAFGKYGPIQKAQVMYDPHSREPRGFAFVTF 121
Query: 124 SRKESADLAVENMNGKFFYGRFILVKIAETGLSK 157
+ E A+ A+ MN F GR I V+ A G ++
Sbjct: 122 EKAEDAEAAITAMNNTEFLGRKITVEKARRGRAR 155
>gi|344277245|ref|XP_003410413.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Loxodonta africana]
Length = 602
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G + VK++T+ K G FV F+ E+A AVE
Sbjct: 383 TNVYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTDSSGKSK-GFGFVSFASHEAAKNAVE 441
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 442 EMNGKDINGQLIFVGRAQKKIER 464
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD A+E M
Sbjct: 293 VFIKNLDKSIDNKTLYEHFSTFGKILSSKVMSDDQGSK--GYAFVHFQNQSAADRAIEEM 350
Query: 137 NG------KFFYGRFILVKIAETGL 155
NG + F RF K E+ L
Sbjct: 351 NGTLLKNCRVFVSRFKSRKDRESEL 375
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K F+ FG + +VK++ E+ + G + FS E A A+ M
Sbjct: 488 LYIKNLDDTIDDEKLRKEFASFGSISRVKVMQEEGRSKGFG--LICFSSHEEAIKAMTEM 545
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRT 163
NG+ + + + +A+ +N R+T
Sbjct: 546 NGRILGSKPLNIALAQ----RNEERKT 568
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + K FS G V+ ++I + ++++ LG A+V F A A++ M
Sbjct: 205 LYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLHVADAQKALDTM 264
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 265 NFDVIKGKSI 274
>gi|195342135|ref|XP_002037657.1| GM18380 [Drosophila sechellia]
gi|194132507|gb|EDW54075.1| GM18380 [Drosophila sechellia]
Length = 650
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 315 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 374
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 375 NALNGLRLQNKTIKVSIA 392
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 404 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADR 463
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 464 AIKELNG 470
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 569 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 628
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 629 NGYTLGNRVLQV 640
>gi|427782335|gb|JAA56619.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 812
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL +TEG V FSQ+GEVV + ++ +K + + G F+ + + S L+V+N+
Sbjct: 38 IFIGGLDYQLTEGDVICVFSQYGEVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNL 97
Query: 137 NGKFFYGRFILVKIAET 153
NG R I V E
Sbjct: 98 NGISLCKRTIRVDHVEN 114
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL T+ + +AFSQ+G+VV+ IV++++ + G FV F+ ++ A A+
Sbjct: 31 TKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAHNALS 90
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK GR I V A+
Sbjct: 91 EMNGKTLNGRVIYVDYAK 108
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + T ++ +AF++FGEV ++VT++++ G FV ++ E A +E
Sbjct: 79 TNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLEDAAKGIE 138
Query: 135 NMNGKFFYGRFILVKIA 151
M+GKF G I + A
Sbjct: 139 GMDGKFLDGWVIFAEYA 155
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ +K+AF +FG +++ K+V +K S + G FV F K++ + A+E M
Sbjct: 9 CFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEEM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGMDLDGRTITVDKAQ 84
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + T +++AFS+FGEVVQ ++VT+++S G FV ++ E A ++
Sbjct: 55 TNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIK 114
Query: 135 NMNGKFFYGRFILVKIA 151
M+G+F G I + A
Sbjct: 115 GMDGQFLDGWVIFAEYA 131
>gi|449507141|ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 33/156 (21%)
Query: 22 TKTAIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSN------SSNSTESDTSS-- 73
T TA P+PF T ++S S + +R+ S+Q+K + S+ S+ T+S + S
Sbjct: 8 TVTAAPKPFFQLQTTHHSSISSTETRMRIR-SIQSKLAYSSTPLPFFSARKTQSISDSLL 66
Query: 74 ---------------------RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
T ++I GL TE ++ AF FG++V+V +V ++L+
Sbjct: 67 FSVACVSSSPSSSSSPRRYTPSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLA 126
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
+P G AF+ ++ +E + A+E M+GK G F+ V
Sbjct: 127 NRPRGFAFLRYASEEESQKAIEGMHGK---GDFVEV 159
>gi|347964852|ref|XP_309157.5| AGAP000965-PA [Anopheles gambiae str. PEST]
gi|333466508|gb|EAA04954.5| AGAP000965-PA [Anopheles gambiae str. PEST]
Length = 340
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
S+T + + LP++MT+ VK FS G+V K++ +K++ Q LG FV + R E A+
Sbjct: 24 DSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGQSLGYGFVNYHRPEDAEK 83
Query: 132 AVENMNGKFFYGRFILVKIA 151
A+ NG + I V A
Sbjct: 84 AINTFNGLRLQNKTIKVSFA 103
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 41/70 (58%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD +++ GL +SMT+ ++ F+ +G+++ +I+ + ++ G F+ F ++
Sbjct: 107 SDAIKGANLYVSGLSKSMTQQDLENLFNAYGQIITSRILCDNITGLSKGVGFIRFDQRSE 166
Query: 129 ADLAVENMNG 138
A+ A++ +NG
Sbjct: 167 AERAIQQLNG 176
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + + + G FV + + A +AV+++
Sbjct: 257 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSL 316
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 317 NGYTLGNRVLQV 328
>gi|170055898|ref|XP_001863788.1| RNA-binding protein [Culex quinquefasciatus]
gi|167875756|gb|EDS39139.1| RNA-binding protein [Culex quinquefasciatus]
Length = 263
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
+SD T ++I LP ++T+ ++ F ++G +VQ I+ +KL+ P G AFV F+++E
Sbjct: 145 QSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGHPRGVAFVRFNKRE 204
Query: 128 SADLAVENMN 137
A A+ +N
Sbjct: 205 EAQEAISALN 214
>gi|302505870|ref|XP_003014892.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291178463|gb|EFE34252.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 312
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+G V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRVLRV 106
>gi|297793411|ref|XP_002864590.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
gi|297310425|gb|EFH40849.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
Length = 173
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TEG + F+Q+GEVV V + +K + + G AFV + + S +LAV+N+
Sbjct: 38 VYVGELLYDLTEGDLLAVFAQYGEVVDVNLARDKGTGKSKGFAFVAYEDQRSTNLAVDNL 97
Query: 137 NGKFFYGRFILVK 149
NG GR I V+
Sbjct: 98 NGAKVLGRIIKVE 110
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL +G +K+AFS FGEV + +++T++ + + G FV FS +E A A +M
Sbjct: 39 LFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASSM 98
Query: 137 NGKFFYGRFILVKIA 151
+G+ GR + V A
Sbjct: 99 DGQELDGRSVRVNFA 113
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD R F+ GL + + +++AFSQ+GE+V+ KI+ ++ + + G FV F+ ++S
Sbjct: 40 SDVEYRC--FVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQS 97
Query: 129 ADLAVENMNGKFFYGRFILVKIAET 153
A+E MNG+ GR I V A++
Sbjct: 98 MKDAIEGMNGQNLDGRNITVNEAQS 122
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP +++E ++ AFS+FG+V I+ +K S + G FV S ++A A+E M
Sbjct: 3 IYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAM 62
Query: 137 NGKFFYGRFILVKIA 151
+ K F GR I+V A
Sbjct: 63 HNKDFMGRSIMVNEA 77
>gi|340386042|ref|XP_003391517.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Amphimedon queenslandica]
Length = 393
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 73 SRTG-IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
SR G IFIK L S+ + FS FG ++ K+ T+ L+ Q G FV F +E+ADL
Sbjct: 96 SRAGHIFIKNLERSIDHKALYDTFSAFGNILSCKVATD-LNGQSKGIGFVHFDEQEAADL 154
Query: 132 AVENMNGKFFYGRFILV 148
A+E +NG+ R + V
Sbjct: 155 AIEKVNGQLLNNRKVHV 171
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+ + +AFSQ+GEVV+ KI+ ++ + + G FV F +++ A+E MN
Sbjct: 9 FVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMN 68
Query: 138 GKFFYGRFILVKIAET 153
G+ GR I V A++
Sbjct: 69 GQDLDGRNITVNEAQS 84
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
T +++ LP ++TE ++ FS++G +VQ I+ +K++ P G AFV F ++E A A+
Sbjct: 198 ETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKITGLPRGVAFVRFDKREEAQEAI 257
Query: 134 ENMNGKFFYG--RFILVKIAE 152
++G G + VKIAE
Sbjct: 258 ARLHGTIPEGGSEPLSVKIAE 278
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
+S+ RT + I LP+SMTE + F G V +++ + + G FV +++ E
Sbjct: 106 KSNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAE 165
Query: 128 SADLAVENMNG 138
A A+ +NG
Sbjct: 166 DAATAINTLNG 176
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL S T+ +++ F G + + IV ++ + + G FV F + SA+ AV +
Sbjct: 5 LFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAVSEL 64
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
NGK GR I+V +AE +R R T KF
Sbjct: 65 NGKDLDGRNIVVSVAEDKSRSDRNRNTNRKF 95
>gi|449433511|ref|XP_004134541.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 2 [Cucumis sativus]
gi|449490650|ref|XP_004158666.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 2 [Cucumis sativus]
Length = 153
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+ ++ LP S E R+++ FS F V + ++ +K+P G AF+ ++ ++ A LA+E M
Sbjct: 47 LMVRNLPYSTNESRLQEEFSNF-----VLLAKDRSTKRPKGYAFIQYTCQDDAMLALETM 101
Query: 137 NGKFFYGRFILVKIAETG 154
+ K F GR I V+IA G
Sbjct: 102 DCKIFDGRMIYVEIATPG 119
>gi|224093656|ref|XP_002196012.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Taeniopygia guttata]
Length = 216
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP ++T + + FS++G+VV+V I+ +K +++ G AF+ F KESA
Sbjct: 8 SKSTVYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 SRALNNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|171683191|ref|XP_001906538.1| hypothetical protein [Podospora anserina S mat+]
gi|170941555|emb|CAP67207.1| unnamed protein product [Podospora anserina S mat+]
Length = 398
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 36 TSNNSSSVSVSRIYSHPSLQTKC--SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKK 93
T++N +S +++I + +L K +G S S +D ++ GLP +TEG V
Sbjct: 14 TTSNHASQKMNQIRAIQALNKKELENGIPPSASWHTDYRDTAFVYFGGLPYELTEGDVIT 73
Query: 94 AFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
FSQ+GE +K+V +K + + G ++ + + S DLAV+N+ G GR I V A
Sbjct: 74 IFSQYGEPTFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIAGRLIRVDHA 131
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + T +K+AF++FGEV+ ++VT++++ G FV ++ E A +E M
Sbjct: 38 LFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGM 97
Query: 137 NGKFFYGRFILVKIA 151
+GKF G I + A
Sbjct: 98 DGKFLDGWVIFAEYA 112
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 169 NALNGLRLQNKTIKVSIA 186
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 198 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADR 257
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 258 AIKELNG 264
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 363 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 422
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 423 NGYTLGNRVLQV 434
>gi|410964145|ref|XP_003988616.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Felis catus]
Length = 217
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQVFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 111 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 170
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 171 NALNGLRLQNKTIKVSIA 188
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 200 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADR 259
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 260 AIKELNG 266
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 365 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 424
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 425 NGYTLGNRVLQV 436
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ LP + E +K+ F +FGEV VKI+T++ + + G F+ E+A A+ +
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 137 NGKFFYGRFILVKIAE 152
NG YGR I+V AE
Sbjct: 63 NGAELYGRTIVVNQAE 78
>gi|324512454|gb|ADY45159.1| ELAV-like protein 1 [Ascaris suum]
Length = 477
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S+T + I LP++M++ V+ FS GE+ K+V +K++ Q LG FV + R+E A A
Sbjct: 101 SKTNLIINYLPQTMSQEEVRSLFSSMGEIDSCKLVRDKITGQSLGYGFVNYVRQEDALKA 160
Query: 133 VENMNGKFFYGRFILVKIA 151
V +NG + I V A
Sbjct: 161 VSTLNGLRLQNKTIKVSFA 179
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP+SM++ ++ F +G+++ +I+++ ++ G FV F RK A++A+ +
Sbjct: 191 LYVSGLPKSMSQPELENLFRPYGQIITSRILSDNITGLSKGVGFVRFDRKGEAEVAISKL 250
Query: 137 NGKFFYG 143
NG G
Sbjct: 251 NGTIPAG 257
>gi|427776735|gb|JAA53819.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Rhipicephalus pulchellus]
Length = 306
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+S+ +++ GL E + E + AF FG++V V+I + +++ G AFV F E A
Sbjct: 3 TTSKRIVYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETEKHRGFAFVEFESAEDAA 62
Query: 131 LAVENMNGKFFYGRFILVKIA 151
A++NMN +GR I V IA
Sbjct: 63 AAIDNMNDSELFGRTIRVNIA 83
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + EG ++ AFS +GE++ KI+ ++ + + G F+ ++ +E A A+ +
Sbjct: 33 LFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMAL 92
Query: 137 NGKFFYGRFILVKIA 151
+GK +GR + V A
Sbjct: 93 DGKDLHGRNLRVSAA 107
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + +G +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSK-GFGFVSYEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 250 EMNGKEMSGKAIFVGRAQKKVERQ 273
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++++ FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVMKGKPIRI 84
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++I L S+T+ +K AF +FG V K+VT++ S++ G FV F + E A A+E
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 135 NMNGKFFYGRFILVKIA 151
MN + GR I V ++
Sbjct: 62 EMNEQELEGRRIKVDVS 78
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 120 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 179
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 180 NALNGLRLQNKTIKVSIA 197
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 209 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAPGLSKGVGFIRFDQRFEADR 268
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 269 AIKELNG 275
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 374 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 433
Query: 137 NG 138
NG
Sbjct: 434 NG 435
>gi|296816707|ref|XP_002848690.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
gi|238839143|gb|EEQ28805.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
Length = 276
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+G V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRVLRV 106
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + +G +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 208 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSK-GFGFVSYEKHEDANKAVE 266
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 267 EMNGKEMSGKAIFVGRAQKKVERQ 290
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 118 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 175
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 176 NGMLLNDRKVFVGRF 190
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++++ FS FG + K++ E + G FV FS E A AV M
Sbjct: 313 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 370
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 371 NGRIVGSKPLYVALAQ 386
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 30 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 89
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 90 NFDVMKGKPIRI 101
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + +++AF+ FG+V+ K++T++ + + G FV FS ++S A+ENMN
Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNQAQS 86
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + T +++AFS+FGEVVQ K+VT++ S G FV + E A ++
Sbjct: 54 TNLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIK 113
Query: 135 NMNGKFFYGRFILVKIA 151
M+G+F G I + A
Sbjct: 114 GMDGQFLDGWVIFAEYA 130
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL T+ ++ +AFS FG++++ K++T++ S + G AFV +S E A+ A E M
Sbjct: 37 LFISGLSRLTTDEKLTEAFSPFGQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGM 96
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 97 NAKFLDGWVIFVDPAK 112
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 169 NALNGLRLQNKTIKVSIA 186
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 198 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGEHAAGLSKGVGFIRFDQRFEADR 257
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 258 AIKELNG 264
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 363 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 422
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 423 NGYTLGNRVLQV 434
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 57 KCSGSNS---SNS--TESDTSSR-TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEK 110
+C S+S SNS ESD ++ T + I LP++MT+ V FS GE+ K+V +K
Sbjct: 25 QCYASSSMLPSNSPILESDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDK 84
Query: 111 LSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
++ Q LG FV + R+E A AV ++NG + I V A
Sbjct: 85 VTGQSLGYGFVNYVRQEDAYKAVTSLNGLRLQNKTIKVSFA 125
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL ++M++ ++ F FG+++ +I+++ ++ G FV F RK A+ A++ +
Sbjct: 137 LYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIDKL 196
Query: 137 NGKFFYG 143
NGK G
Sbjct: 197 NGKIPAG 203
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T +K+AFS+FG+V++ +++T+++S G FV ++ + A A+E M
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEGM 95
Query: 137 NGKFFYGRFILVKIAE 152
+GKF G I + A+
Sbjct: 96 DGKFLDGWVIFAEYAK 111
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++T+ ++K F ++G +VQ I+ +KL+ +P G AFV F+++E A A+
Sbjct: 188 TNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAIS 247
Query: 135 NMN 137
+N
Sbjct: 248 ALN 250
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 52 PSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKL 111
P++ T S + ++ + T + + LP+ MT+ + F G + +I+ +
Sbjct: 79 PAISTNSVNSGGGDCGDTQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYK 138
Query: 112 SKQPLGSAFVWFSRKESADLAVENMNG 138
+ G AFV F+ + A A++++NG
Sbjct: 139 TGYSFGYAFVDFASEIDAQNAIKSLNG 165
>gi|410084038|ref|XP_003959596.1| hypothetical protein KAFR_0K01050 [Kazachstania africana CBS 2517]
gi|372466188|emb|CCF60461.1| hypothetical protein KAFR_0K01050 [Kazachstania africana CBS 2517]
Length = 154
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
S +D + +FI GL + +TEG + FSQ+G V + + +K S + G AF+ +
Sbjct: 25 SWHNDYKDQAYVFIGGLNKDLTEGDILTIFSQYGVPVDIYLARDKYSGESKGFAFLKYED 84
Query: 126 KESADLAVENMNGKFFYGRFILVKIA 151
+ S LA++N+NG GR I V A
Sbjct: 85 QRSTVLAIDNLNGSKIAGRIIQVDHA 110
>gi|297819328|ref|XP_002877547.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
gi|297323385|gb|EFH53806.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
Length = 316
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ +P +TEG + FSQ+GE+V V ++ +K + + G AF+ + + S LAV+N+
Sbjct: 38 VYVGCIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTVLAVDNL 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGALVLGRTIKV 109
>gi|297806589|ref|XP_002871178.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
gi|297317015|gb|EFH47437.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F++ LP + TE + + FS+FGE+ +V +V +K +K G AFV + E A A+E +
Sbjct: 214 LFVRNLPYTATEEELTEHFSKFGEISEVHLVLDKETKNSRGMAFVLYQIPEYAKRAMEEL 273
Query: 137 NGKFFYGRFILV 148
+ K F GR + +
Sbjct: 274 DNKDFQGRLLHI 285
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++T+ ++K F ++G +VQ I+ +KL+ +P G AFV F+++E A A+
Sbjct: 181 TNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAIS 240
Query: 135 NMN 137
+N
Sbjct: 241 ALN 243
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 169 NALNGLRLQNKTIKVSIA 186
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 40/62 (64%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ G F+ F ++ AD A++ +
Sbjct: 198 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKEL 257
Query: 137 NG 138
NG
Sbjct: 258 NG 259
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 358 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 418 NGYTLGNRVLQV 429
>gi|169600369|ref|XP_001793607.1| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
gi|160705424|gb|EAT89749.2| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
Length = 373
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G + S +D I I GLP ++EG + FSQ+GE V VK+ +K + + G
Sbjct: 17 AGVGTEGSWHTDYRDTAFINIGGLPFELSEGDIITIFSQYGEPVWVKLARDKETGKSRGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
A++ + + S DLAV+N+ G R I V A
Sbjct: 77 AWIKYEDQRSCDLAVDNLGGSTIMDRVIRVDHA 109
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++T+ ++K F ++G +VQ I+ +KL+ +P G AFV F+++E A A+
Sbjct: 188 TNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAIS 247
Query: 135 NMNGKFFYG--RFILVKIAE 152
+N G + + V++AE
Sbjct: 248 ALNNVIPEGASQPLTVRLAE 267
>gi|451853478|gb|EMD66772.1| hypothetical protein COCSADRAFT_138790 [Cochliobolus sativus
ND90Pr]
Length = 318
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE V +K+ +K + + G A++ + + S DLAV+N+
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G R I V
Sbjct: 95 GGASIMDRIIRV 106
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++T+ ++K F ++G +VQ I+ +KL+ +P G AFV F+++E A A+
Sbjct: 188 TNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAIS 247
Query: 135 NMN 137
+N
Sbjct: 248 ALN 250
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 47/103 (45%)
Query: 52 PSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKL 111
P++ T S + ++ + T + + LP+ MT+ + F G + +I+ +
Sbjct: 79 PAISTNSVNSGGGDCGDTQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYK 138
Query: 112 SKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETG 154
+ G AFV F+ + A A++++NG + + V A G
Sbjct: 139 TGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPG 181
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++T+ ++K F ++G +VQ I+ +KL+ +P G AFV F+++E A A+
Sbjct: 171 TNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAIS 230
Query: 135 NMN 137
+N
Sbjct: 231 ALN 233
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 47/103 (45%)
Query: 52 PSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKL 111
P++ T S + ++ + T + + LP+ MT+ + F G + +I+ +
Sbjct: 62 PAISTNSVNSGGGDCGDNQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYK 121
Query: 112 SKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETG 154
+ G AFV F+ + A A++++NG + + V A G
Sbjct: 122 TGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPG 164
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI L S T+ +K AFS+FG + + K+V +K S + G FV F K++ + A+E M
Sbjct: 9 CFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGLDLDGRNITVDKAQ 84
>gi|195576197|ref|XP_002077963.1| GD23195 [Drosophila simulans]
gi|194189972|gb|EDX03548.1| GD23195 [Drosophila simulans]
Length = 464
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 314 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 373
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 374 NALNGLRLQNKTIKVSIA 391
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESAD 130
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 403 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEAD 461
>gi|58271546|ref|XP_572929.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115110|ref|XP_773853.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256481|gb|EAL19206.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229188|gb|AAW45622.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 373
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GLP +TEG + FSQ+GE++ V +V +K + + G F+ + + S LAV+NM
Sbjct: 33 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 92
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 93 NGTQVIGRTLKV 104
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++ GLP ++EG V FSQFGE V +K+V +K + + G ++ + + S DLAV+N+
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR I V A
Sbjct: 95 GGAEIGGRLIRVDHA 109
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL S+ E +K AFS FGEV +V+I+ +K S + G FV FS++ A A + M
Sbjct: 27 LFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKDAM 86
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+GK GR + + A L K RG
Sbjct: 87 DGKALLGRPLRISFA---LEKVRG 107
>gi|302794524|ref|XP_002979026.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
gi|300153344|gb|EFJ19983.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
Length = 130
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 58 CSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
SG S S ++ IF GL + EG + F+Q+GEVV V ++ +K + + G
Sbjct: 19 ASGIAESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYGEVVDVNLIRDKGTGKSKG 78
Query: 118 SAFVWFSRKESADLAVENMNGKFFYGRFILVK 149
F+ + + S LAV+N+NG GR + V
Sbjct: 79 YGFLAYEDQRSTTLAVDNLNGAQVAGRTLRVD 110
>gi|291396317|ref|XP_002714523.1| PREDICTED: zinc finger CCHC-type and RNA binding motif 1-like
[Oryctolagus cuniculus]
Length = 246
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 37 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGIAFILFLDKDSAQNC 96
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 97 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 130
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
+SD T ++I LP ++T+ ++ F ++G +VQ I+ +KL+ P G AFV F+++E
Sbjct: 167 QSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGFPRGVAFVRFNKRE 226
Query: 128 SADLAVENMNGKFFYG--RFILVKIAE 152
A A+ +N G + ++V++AE
Sbjct: 227 EAQEAISALNNVIPQGGTQPLIVRVAE 253
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+T + + LP++M++ ++ F FGEV K++ +K++ Q LG FV + ++E A+ A+
Sbjct: 111 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 170
Query: 134 ENMNGKFFYGRFILVKIA 151
+NG + I V IA
Sbjct: 171 NALNGLRLQNKTIKVSIA 188
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL-----GSAFVWFSRKESADL 131
+++ GLP++MT+ ++ FS +G+++ +I+ + ++ + G F+ F ++ AD
Sbjct: 200 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADR 259
Query: 132 AVENMNG 138
A++ +NG
Sbjct: 260 AIKELNG 266
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + S + G FV + E A LA++++
Sbjct: 365 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 424
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 425 NGYTLGNRVLQV 436
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M R+ + F +FG + VK++T++ K G FV + + E A AV+
Sbjct: 496 TNVYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDESGKS-KGFGFVSYEKHEDAQRAVD 554
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRR 162
MNGK F G+ I V G ++ +G R
Sbjct: 555 EMNGKEFNGKRIYV-----GRAQKKGER 577
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + K FS FG ++ K+++++ + G FV F +++AD A+E M
Sbjct: 406 IFIKNLEKSIDNKALYKTFSAFGNILSCKVISDENGSK--GYGFVHFENQQAADKAIEKM 463
Query: 137 NG------KFFYGRF 145
NG K + GRF
Sbjct: 464 NGVRLNNLKVYVGRF 478
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +S+ + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 601 LYVKNLDDSIDDERLRKAFSPFGTITSAKVMMEGGHSR--GFGFVCFSAPEEAAKAVSEM 658
Query: 137 NGKFFYGRFILVKIAE 152
NGK + + V +A+
Sbjct: 659 NGKLVATKPLYVALAQ 674
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 70 DTSSRTGI-----FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
D S T I ++ L +TE + + FS G ++ +++ + L+++ LG A+V F
Sbjct: 306 DVSGATAIPMASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQ 365
Query: 125 RKESADLAVENMNGKFFYGRFILV 148
+ A+ +E MN G+ + +
Sbjct: 366 QLADAERVLETMNLDVIKGKPVRI 389
>gi|373953846|ref|ZP_09613806.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373890446|gb|EHQ26343.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 107
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GLP + E + F FG V ++IV ++ + Q G FV + + A A++NM
Sbjct: 3 IFIAGLPFQVEEEELTAVFGDFGHVKSLRIVKDRETGQSKGFGFVEMTNDDEAKEAIKNM 62
Query: 137 NGKFFYGRFILVKIAET 153
NG +YGR I V AE
Sbjct: 63 NGADYYGRRISVAEAED 79
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + + ++++F+ FG+V++ KI+ ++ + + G FV F+ + A+ AVE M
Sbjct: 41 VFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAAVEAM 100
Query: 137 NGKFFYGRFILVKIAE 152
+GK GR I V IA+
Sbjct: 101 DGKDLQGRSIRVNIAQ 116
>gi|85116496|ref|XP_965061.1| hypothetical protein NCU02467 [Neurospora crassa OR74A]
gi|28926863|gb|EAA35825.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567120|emb|CAE76416.1| conserved hypothetical protein [Neurospora crassa]
Length = 395
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++ GLP ++EG V FSQFGE V +K+V +K + + G ++ + + S DLAV+N+
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR I V A
Sbjct: 95 GGAEIGGRLIRVDHA 109
>gi|302806382|ref|XP_002984941.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
gi|300147527|gb|EFJ14191.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
Length = 130
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 58 CSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
SG S S ++ IF GL + EG + F+Q+GEVV V ++ +K + + G
Sbjct: 19 ASGIAESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYGEVVDVNLIRDKGTGKSKG 78
Query: 118 SAFVWFSRKESADLAVENMNGKFFYGRFILVK 149
F+ + + S LAV+N+NG GR + V
Sbjct: 79 YGFLAYEDQRSTTLAVDNLNGAQVAGRTLRVD 110
>gi|428673292|gb|EKX74205.1| nucleolar phosphoprotein, putative [Babesia equi]
Length = 197
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 63 SSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVW 122
+N ++ + I++ LP +TE ++K+ F QFG+V++++++ K + G AFV
Sbjct: 2 ENNVVYTNNVKKNIIYVGNLPRQLTESQIKRYFLQFGDVLKIRLMKSKKTNGSRGYAFVQ 61
Query: 123 FSRKESADLAVENMNGKFFYGRFILVKIAE 152
F E A +A + MN F G+ + V + +
Sbjct: 62 FENNEIAQIAADAMNNYFIDGKSLKVHVKD 91
>gi|78185978|ref|YP_374021.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78165880|gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 99
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
+ I+I LP S++E ++ AFSQFG+V I+ +K S + G FV S E+ A+
Sbjct: 9 KMNIYIGNLPYSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSSDEAGRAAI 68
Query: 134 ENMNGKFFYGRFILV 148
E MN + F GR I V
Sbjct: 69 EAMNEQEFKGRTIKV 83
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%)
Query: 48 IYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIV 107
+ H +L + +G +S + T +FI GL + + ++++AFS FGEV + +++
Sbjct: 10 LLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVI 69
Query: 108 TEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
T++ + + G FV +S ++A A+ M+GK GR + V +A + NR
Sbjct: 70 TDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 121
>gi|194211851|ref|XP_001914735.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Equus caballus]
Length = 217
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + E ++ AFS FG V +VKI+ ++ + + G FV F+ E A++A++ M
Sbjct: 47 LFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEM 106
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+G+ GR I V A + RG
Sbjct: 107 DGRELAGRQIRVDYATDKARETRG 130
>gi|168044555|ref|XP_001774746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673901|gb|EDQ60417.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+ + GL +E VKKAF +FGEVV VKIV ++ S + G FV F+ SA +A+ +M
Sbjct: 7 VHVGGLSYESSEDAVKKAFIEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMAIRDM 66
Query: 137 NGKFFYGRFILV 148
+G GR I V
Sbjct: 67 DGGQIEGRTIRV 78
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSK-GFGFVSFEKHEDANQAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
+MNGK G+ + V A+ + + + +++
Sbjct: 250 DMNGKDINGKMVFVGRAQKKVERQAELKRKFE 281
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E+ + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
ST + + +++ L +TE + + FS G V+ +++ + ++++ LG A+V F +
Sbjct: 2 STTASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 126 KESADLAVENMNGKFFYGRFILV 148
A+ A++ MN G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I+IK + M + R+++ FS++G+ V VK++T+ K G FV F E+A AVE
Sbjct: 190 TNIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSK-GFGFVSFYSHEAAQKAVE 248
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ + V A+
Sbjct: 249 EMNGKDINGQLLFVGRAQ 266
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD A+E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD--DQGSRGYAFVHFQNQMAADRAIEEM 157
Query: 137 NG------KFFYGRF 145
NG + F GRF
Sbjct: 158 NGALLKDCRLFVGRF 172
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++++ FS FG + +VK++ E+ + G + FS E A A+ M
Sbjct: 295 LYIKNLDDTIDDEKLRREFSSFGSISRVKVMKEEGRSKGFG--LICFSSPEEATRAMTEM 352
Query: 137 NGKFFYGRFILVKIAET 153
NG+ + + + +A++
Sbjct: 353 NGRILGSKPLNIALAQS 369
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + K FS G V+ ++I + ++++ LG A+V F + A A++ M
Sbjct: 12 LYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 137 N 137
N
Sbjct: 72 N 72
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI L S T+ +K AFS+FG + + K+V +K S + G FV F K++ + A+E M
Sbjct: 9 CFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGLDLDGRNITVDKAQ 84
>gi|170028363|ref|XP_001842065.1| RNA-binding protein [Culex quinquefasciatus]
gi|167874220|gb|EDS37603.1| RNA-binding protein [Culex quinquefasciatus]
Length = 365
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S+T + + LP+ MT+ ++ FS GEV K++ +K++ Q LG FV + R E
Sbjct: 38 SQEDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYQRAED 97
Query: 129 ADLAVENMNGKFFYGRFILVKIA 151
A A+ +NG + I V A
Sbjct: 98 ASKAINTLNGLRLQNKQIKVSFA 120
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L E + + F FG V VK++ + + + G FV + + A +A++++
Sbjct: 284 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSL 343
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
NG R + V +T SKN
Sbjct: 344 NGYTLGNRVLQVSF-KTNKSKN 364
>gi|350297073|gb|EGZ78050.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 395
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++ GLP ++EG V FSQFGE V +K+V +K + + G ++ + + S DLAV+N+
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR I V A
Sbjct: 95 GGAEIGGRLIRVDHA 109
>gi|387219259|gb|AFJ69338.1| hypothetical protein NGATSA_3013400, partial [Nannochloropsis
gaditana CCMP526]
Length = 290
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTG---IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTE 109
L+ K + + +N DTS+ G +F+ LP SM E V++ FS+ G VV V IV +
Sbjct: 162 DLKEKVAENVRNNRHPLDTSAAKGAISVFVGNLPFSMAEADVQEMFSEHGGVVSVTIVKD 221
Query: 110 KLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
+L++ G FV + KE + A+ ++G+ GR I V++ T ++ R R+ R +
Sbjct: 222 QLNRSK-GFGFVEMADKEEGERAIAALDGREMDGRPINVRLG-TSKAQPRMRKERTQM 277
>gi|407850128|gb|EKG04639.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 477
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD SRT +FI +P M + ++ F+ +G+++ ++ + + LG+AFV ++ E
Sbjct: 109 SDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGKSLGTAFVRYASTEE 168
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A A++ M+GK GR I V+ A+
Sbjct: 169 AMSAIKGMSGKRIGGRAIAVQWAK 192
>gi|357490875|ref|XP_003615725.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
gi|355517060|gb|AES98683.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
Length = 149
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%)
Query: 49 YSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVT 108
Y P +++ + SS S + + I +K LP E ++K FS FG++ +V++V
Sbjct: 13 YYTPPNRSRLNLLRSSLSMRHEYPLASKILVKNLPYFTGENALQKKFSNFGKIAEVQMVK 72
Query: 109 EKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKI 150
+ +++ G AF+ ++ ++ A LA+E M+ + FYGR I V++
Sbjct: 73 DVSTERSKGLAFIQYTCQDDAMLALETMDQQSFYGRTISVEL 114
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%)
Query: 51 HPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEK 110
H +L + +G +S + T +FI GL + + ++++AFS FGEV + +++T++
Sbjct: 13 HSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDR 72
Query: 111 LSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
+ + G FV +S ++A A+ M+GK GR + V +A + NR
Sbjct: 73 ETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 121
>gi|195433960|ref|XP_002064974.1| GK14925 [Drosophila willistoni]
gi|194161059|gb|EDW75960.1| GK14925 [Drosophila willistoni]
Length = 158
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ G P ++TEG + FSQ+GEVV + +V + + + G F+ + + S LAV+N+
Sbjct: 37 IFVGGFPYTLTEGDLVCVFSQYGEVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 96
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 97 NGIQITGRTLRV 108
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL E +K AFSQ G ++QVK++ ++ + G FV F+ ++ A A+ M
Sbjct: 39 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 98
Query: 137 NGKFFYGRFILVKIAETG 154
G+ GR I V A +G
Sbjct: 99 GGEVIDGRNIRVHYANSG 116
>gi|302894521|ref|XP_003046141.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
gi|256727068|gb|EEU40428.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
Length = 307
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
S S +D I+ GLP ++EG V FSQFGE V +K+V +K + + G +
Sbjct: 3 STPEGSWHTDYRDTAYIYFGGLPYELSEGDVVTIFSQFGEPVFLKLVRDKETGKSKGFGW 62
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKIA 151
+ + + S DLAV+N+ G GR + V A
Sbjct: 63 LKYEDQRSTDLAVDNLGGAEIGGRLVRVDHA 93
>gi|294875640|ref|XP_002767414.1| Heterogeneous nuclear ribonucleoprotein G, putative [Perkinsus
marinus ATCC 50983]
gi|239868981|gb|EER00132.1| Heterogeneous nuclear ribonucleoprotein G, putative [Perkinsus
marinus ATCC 50983]
Length = 339
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G S ++ SD + +FI G+P + +GR+ + FSQ+G +V ++ ++++ +P G A
Sbjct: 84 GDGISLASPSDGYNPCKLFIGGIPSDLDQGRLDQFFSQYGNIVDSVVMKDRITGKPRGFA 143
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
+V +S E A A+ + G+++ +
Sbjct: 144 YVTYSTAEEAQTAINAGDANILDGKWVFI 172
>gi|358060582|dbj|GAA93701.1| hypothetical protein E5Q_00346 [Mixia osmundae IAM 14324]
Length = 645
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GL E++TEG V SQ+GEVV V++ +K + +P G AFV + + S LAV+N+
Sbjct: 32 IYMGGLDEALTEGDVITIASQYGEVVNVEMPRDKTTHKPRGFAFVMYEDQRSTVLAVDNL 91
Query: 137 NGKFFYGRFILVKIA----------ETGLSKNRGRRT 163
G R + V ETGL K R ++
Sbjct: 92 TGSKLLERTLRVDHVKNFKHLEHDQETGLMKERSEQS 128
>gi|336464966|gb|EGO53206.1| hypothetical protein NEUTE1DRAFT_150582 [Neurospora tetrasperma
FGSC 2508]
Length = 395
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++ GLP ++EG V FSQFGE V +K+V +K + + G ++ + + S DLAV+N+
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR I V A
Sbjct: 95 GGAEIGGRLIRVDHA 109
>gi|148697138|gb|EDL29085.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Mus musculus]
Length = 296
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
I GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N N
Sbjct: 9 LIGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFN 68
Query: 138 GKFFYGRFILV 148
G GR I V
Sbjct: 69 GIKIKGRTIRV 79
>gi|71405355|ref|XP_805303.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70868659|gb|EAN83452.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 469
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S +FI+ LP + E ++ FS +G+++ ++ + + LG+AFV ++ E A A
Sbjct: 22 SHANLFIRHLPRVVDENELRMFFSPYGQILSAAVMRNIHTGENLGTAFVRYATNEQARTA 81
Query: 133 VENMNGKFFYGRFILVKIAE 152
+ NG+F +GR I V A+
Sbjct: 82 LHGCNGRFLHGRAISVHWAK 101
>gi|74206672|dbj|BAE41588.1| unnamed protein product [Mus musculus]
gi|148672337|gb|EDL04284.1| mCG19744, isoform CRA_c [Mus musculus]
Length = 216
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|224097630|ref|XP_002311019.1| predicted protein [Populus trichocarpa]
gi|222850839|gb|EEE88386.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 60 GSNSSNSTESDTSSRT------GIFI-KGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
G + NS +S +S+T +FI GL +E ++ AF FGE+V+VKI+ +K+S
Sbjct: 244 GDHIINSADSSEASQTTPVKTKKLFITAGLSFYTSEKTLRAAFEGFGELVEVKIIMDKIS 303
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGK 139
K+ G AFV ++ +E+A A++ MNGK
Sbjct: 304 KRSKGYAFVEYTTEEAASAALKEMNGK 330
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ L TE + K FS FGEV QV I+T++ + + G AFV F +E A A++ M
Sbjct: 7 VFVGNLSYDATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAIKEM 66
Query: 137 NGKFFYGRFILVKIAET 153
+ + F GR + V+ A++
Sbjct: 67 HEEDFLGRSVTVREAQS 83
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AFSQ+GE++ KI+ ++ + + G FV F +ES A+E MN
Sbjct: 9 FVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMN 68
Query: 138 GKFFYGRFILVKIAET 153
GK GR + V A++
Sbjct: 69 GKELDGRQVTVNEAQS 84
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 52 PSLQTKCSGS-----NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKI 106
PS+Q+K + + D S +F++ LP S TE + K FS++G + ++
Sbjct: 358 PSVQSKAESRPWEQRDKQELQQEDLSESGRLFVRNLPYSCTEDDLDKLFSKYGPISEIHF 417
Query: 107 VTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
+ L+K+P G AFV F E A A ++G+ F GR + V
Sbjct: 418 PIDSLTKKPKGFAFVTFLITEHAVKAYAEVDGQIFQGRLLHV 459
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+++ FS+FG+ + VK++ + + G FV F + E A AV
Sbjct: 191 TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDHTGRS-KGFGFVNFEKHEEAQKAVA 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
+MNGK GR + V A+ L +
Sbjct: 250 DMNGKEINGRMVYVGRAQKRLERQ 273
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS +G + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVSTKPLYVALAQ 369
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A A++ M
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSR--GHGFVHFETQEAATRAIQTM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSK-GFGFVSFEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ + V A+ + + + +++
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRKFE 281
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.5 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGAITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 44/83 (53%)
Query: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
+T + + +++ L +TE + + FS G V+ +++ + ++++ LG A+V F +
Sbjct: 2 NTAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 126 KESADLAVENMNGKFFYGRFILV 148
A+ A++ MN G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|358060581|dbj|GAA93700.1| hypothetical protein E5Q_00345 [Mixia osmundae IAM 14324]
Length = 641
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GL E++TEG V SQ+GEVV V++ +K + +P G AFV + + S LAV+N+
Sbjct: 32 IYMGGLDEALTEGDVITIASQYGEVVNVEMPRDKTTHKPRGFAFVMYEDQRSTVLAVDNL 91
Query: 137 NGKFFYGRFILVKIA----------ETGLSKNRGRRT 163
G R + V ETGL K R ++
Sbjct: 92 TGSKLLERTLRVDHVKNFKHLEHDQETGLMKERSEQS 128
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + T +K+AF++FGEV+ ++VT++++ G F+ ++ E A +E M
Sbjct: 38 LFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGIEGM 97
Query: 137 NGKFFYGRFILVKIA 151
+GKF G I + A
Sbjct: 98 DGKFLDGWVIFAEYA 112
>gi|159164312|pdb|2E5H|A Chain A, Solution Structure Of Rna Binding Domain In Zinc Finger
Cchc-Type And Rna Binding Motif 1
Length = 94
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 15 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 74
Query: 133 VENMNGKFFYGRFILVKIA 151
+N K +GR I IA
Sbjct: 75 TRAINNKQLFGRVIKASIA 93
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ P TE + FS G V V+IV ++ + +P G AFV FS ++SA+ AV +
Sbjct: 8 IYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNEL 67
Query: 137 NGKFFYGRFILVKIA 151
NG F GR + V IA
Sbjct: 68 NGADFNGRQLRVNIA 82
>gi|302854208|ref|XP_002958614.1| hypothetical protein VOLCADRAFT_69624 [Volvox carteri f.
nagariensis]
gi|300256075|gb|EFJ40351.1| hypothetical protein VOLCADRAFT_69624 [Volvox carteri f.
nagariensis]
Length = 134
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F GL +TEG + FSQ+GE+V + ++ K + + G AF+ + + S LAV+N+
Sbjct: 33 VFAGGLDYELTEGDLLAVFSQYGEIVDLNLIRHKDTGKSKGFAFIAYEDQRSTILAVDNL 92
Query: 137 NGKFFYGRFILVK 149
NG GR I V+
Sbjct: 93 NGAKVVGRTIRVE 105
>gi|168067714|ref|XP_001785753.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662601|gb|EDQ49434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 79
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL TE V+K F FGEV+ VKIV +K+S + G FV F+ + SA +A+ +
Sbjct: 7 VYVGGLSYESTEDTVRKHFMTFGEVLSVKIVHDKMSGESRGFGFVTFANQRSASMAISDG 66
Query: 137 NGKFFYGRFILV 148
+G GR I V
Sbjct: 67 DGVQIEGRCIRV 78
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ +V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 159 NGMLLNGRKVFV 170
>gi|148672336|gb|EDL04283.1| mCG19744, isoform CRA_b [Mus musculus]
Length = 233
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 24 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNC 83
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 84 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 117
>gi|21313088|ref|NP_080301.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Mus musculus]
gi|81916891|sp|Q9CZ96.1|ZCRB1_MOUSE RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=MADP-1;
AltName: Full=U11/U12 small nuclear ribonucleoprotein 31
kDa protein; Short=U11/U12 snRNP 31 kDa protein
gi|12849869|dbj|BAB28513.1| unnamed protein product [Mus musculus]
gi|25005468|dbj|BAC23140.1| MADP-1 protein [Mus musculus]
gi|34849714|gb|AAH58368.1| Zcrb1 protein [Mus musculus]
Length = 217
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+++ FS+FG+ + VK++ + + G FV F + E A AV
Sbjct: 191 TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDNTGRSK-GFGFVNFEKHEEAQKAVA 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
+MNGK GR + V A+ L +
Sbjct: 250 DMNGKEINGRMVYVGRAQKRLERQ 273
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A A+E M
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSR--GHGFVHFETQEAATRAIETM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS +G + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVSTKPLYVALAQ 369
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + ++ AF+ FG+VV +++ ++ S + G FV FS E A+ A++
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIK 97
Query: 135 NMNGKFFYGRFILVKIAE 152
M+G+ GR I V+IA+
Sbjct: 98 AMDGQELQGRNIRVRIAQ 115
>gi|71652518|ref|XP_814914.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70879928|gb|EAN93063.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 477
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD SRT +FI +P M + ++ F+ +G+++ ++ + + LG+AFV ++ E
Sbjct: 109 SDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGKSLGTAFVRYASTEE 168
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A A++ M+GK GR I V+ A+
Sbjct: 169 AMSAIKGMSGKRIGGRAIAVQWAK 192
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ +V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 159 NGMLLNGRKVFV 170
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ +V ++ + G FV F E+A+ A++ M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKKM 158
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 159 NGMLLNGRKVFV 170
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ +V ++ + G FV F E+A+ A++ M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKKM 158
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 159 NGMLLNGRKVFV 170
>gi|403216110|emb|CCK70608.1| hypothetical protein KNAG_0E03510 [Kazachstania naganishii CBS
8797]
Length = 172
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL +++TEG + FSQFG V + +V ++ S + G A++ + + S LAV+NM
Sbjct: 36 IFIGGLNKNLTEGDILTVFSQFGVPVDILLVRDRNSGESKGFAYLKYEDQRSTILAVDNM 95
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
NG GR + V + L + + T YK
Sbjct: 96 NGVKIAGRMVQV---DHTLFEPKADHTVYK 122
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ +V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 159 NGMLLNGRKVFV 170
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ +V ++ + G FV F E+A+ A++ M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKKM 158
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 159 NGMLLNGRKVFV 170
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP +TEG + FSQFGE V +K+ +K + + G ++ + + S DLAV+N+
Sbjct: 19 IYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 78
Query: 137 NGKFFYGRFILVKIA 151
G GR I V A
Sbjct: 79 GGADISGRMISVDHA 93
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S T +F+ GL E ++ AF Q GE+++VK++ + ++ + G FV F + +A A
Sbjct: 56 SSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAAA 115
Query: 133 VENMNGKFFYGRFILVKIAETG 154
+ MNG+ GR I V A G
Sbjct: 116 RKEMNGQILDGRRIRVSYAHKG 137
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGTLLNDRKVFVGRF 173
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+++ FS++G+ + VK++T+ K G FV F E+A AVE
Sbjct: 190 TNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKSK-GFGFVSFDNHEAAQKAVE 248
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 249 EMNGKDINGQLIFVGRAQ 266
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L S+ + + FS FG+++ K++++ + G AFV F + +AD A+E M
Sbjct: 100 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAADRAIEEM 157
Query: 137 NGKF------FYGRF 145
NGK F GRF
Sbjct: 158 NGKLLKDCKVFVGRF 172
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 295 LYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEEATKAMTEM 352
Query: 137 NGKFF 141
NG+
Sbjct: 353 NGQIL 357
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + K FS G V+ ++I + ++++ LG A+V F + A A++ M
Sbjct: 12 LYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 72 NFDMIKGKSI 81
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R+ KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + +K+AF+ FG+VV K++ ++ S + G FV FS ++ A A+ M
Sbjct: 41 LFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAM 100
Query: 137 NGKFFYGRFILVKIAE 152
+G+ +GR I V +A+
Sbjct: 101 DGQQLHGRNIRVNLAQ 116
>gi|327293734|ref|XP_003231563.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
gi|326466191|gb|EGD91644.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
Length = 277
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+G V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRVLRV 106
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +FI GL + + ++++AFS FGEV + +++T++ + + G FV +S ++A A+
Sbjct: 37 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 96
Query: 135 NMNGKFFYGRFILVKIA 151
M+GK GR + V +A
Sbjct: 97 AMDGKEIDGRQVRVNMA 113
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKVLYDTASAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
>gi|378755700|gb|EHY65726.1| hypothetical protein NERG_01333 [Nematocida sp. 1 ERTm2]
Length = 316
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIKGL S TE +K+ F QFGE+V+V+I + G +V F KE+ + + ++
Sbjct: 93 IFIKGLNFSATEDELKELFGQFGEIVEVRIPRSRDGPGGKGFGYVEFESKEACEKS-RSL 151
Query: 137 NGKFFYGRFILVKIAETG 154
NG + GR I+V +A +G
Sbjct: 152 NGTDYNGRTIVVDMARSG 169
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + ++KAFSQ+G+VV+ KI+ ++ + + G FV F+ ++S A+E MN
Sbjct: 11 FVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIEGMN 70
Query: 138 GKFFYGRFILVKIAE 152
G+ GR I V A+
Sbjct: 71 GQNLDGRNITVNEAQ 85
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + +K AFS FG+VV +++T++ + + G FV FS +SA A+ M
Sbjct: 38 LFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAM 97
Query: 137 NGKFFYGRFILVKIA 151
+G+ +GR I V A
Sbjct: 98 DGQELHGRNIRVSYA 112
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 23 KTAIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESD-------TSSRT 75
+T R F LTS + + V+V ++ H S S ++ +S T
Sbjct: 38 ETGRSRGFGYVTLTSIDFAQVAVQKLDGHIVQGRALKASYSQPYKKAGKEGPVEVAASHT 97
Query: 76 GIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVEN 135
+FI LP + +G +++ F G+VV+VKIV ++ + + G FV S + AD AV++
Sbjct: 98 KVFIGNLPWGVDDGSLEEFFRAHGKVVEVKIVYDRDTGRSRGFGFVTLSSPKEADEAVKS 157
Query: 136 MNGKFFYGRFILVKIAET 153
++G GR + VK+A+T
Sbjct: 158 LDGADCDGRRLRVKLADT 175
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T ++ AF++FGEVV ++VT+++S G FV ++ E A +E M
Sbjct: 37 LFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKGIEGM 96
Query: 137 NGKFFYGRFILVKIA 151
+GKF G I + A
Sbjct: 97 DGKFLDGWVIFAEYA 111
>gi|428169524|gb|EKX38457.1| hypothetical protein GUITHDRAFT_48511, partial [Guillardia theta
CCMP2712]
Length = 83
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ GL +TEG V FSQ+GE V V + +K + + G AF+ + + S +LAV+N+
Sbjct: 12 IYVGGLDYRLTEGDVITIFSQYGEPVDVHLPRDKKTGKSHGFAFLAYEDQRSTNLAVDNL 71
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 72 NGSKLLGRTLRV 83
>gi|77917576|ref|NP_001030112.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Rattus norvegicus]
gi|116256279|sp|Q499V6.1|ZCRB1_RAT RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|71121799|gb|AAH99747.1| Zinc finger CCHC-type and RNA binding motif 1 [Rattus norvegicus]
gi|149017620|gb|EDL76624.1| zinc finger CCHC-type and RNA binding motif 1 [Rattus norvegicus]
Length = 217
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R+ KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|334349632|ref|XP_001381460.2| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Monodelphis domestica]
Length = 332
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 79 IKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N NG
Sbjct: 1 LGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNG 60
Query: 139 KFFYGRFILV 148
GR I V
Sbjct: 61 IKIRGRTIRV 70
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ +V ++ + G FV F E+A+ A++ M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKKM 158
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 159 NGMLLNGRKVFV 170
>gi|21592882|gb|AAM64832.1| unknown [Arabidopsis thaliana]
Length = 320
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D SSRT IF+ + T+ + + F++FGEV++ IVT+ + QP GSA++ F+RKE+A
Sbjct: 158 DASSRT-IFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 216
Query: 130 DLAVENMNGKFFYGRFILV 148
+ A+ +++G F R + +
Sbjct: 217 ENAL-SLDGTSFMSRILKI 234
>gi|449439247|ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
[Cucumis sativus]
Length = 170
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 30/147 (20%)
Query: 22 TKTAIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSN------SSNSTESDTSS-- 73
T TA P+PF T ++S S + +R+ S+Q+K + S+ S+ T+S + S
Sbjct: 8 TVTAAPKPFFQLQTTHHSSISSTETRMRIR-SIQSKLAYSSTPLPFFSARKTQSISDSLL 66
Query: 74 ---------------------RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
T ++I GL TE ++ AF FG++V+V +V ++L+
Sbjct: 67 FSVACVSSSPSSSSSPRRYTPSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLA 126
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGK 139
+P G AF+ ++ +E + A+E M+GK
Sbjct: 127 NRPRGFAFLRYASEEESQKAIEGMHGK 153
>gi|291002051|ref|XP_002683592.1| RRM motif-containing protein [Naegleria gruberi]
gi|284097221|gb|EFC50848.1| RRM motif-containing protein [Naegleria gruberi]
Length = 284
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 61 SNSSNSTESDTSSRTG-IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
+N+ +S +RT I+I GL +TEG + FSQ+GE+V + +V E+ G
Sbjct: 20 TNTPSSWHHQEKNRTAYIYIGGLDFRLTEGDLLSVFSQYGEIVDIDLVREEQELTSKGFC 79
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
F+ + S LA++N+NG GR I V A
Sbjct: 80 FIAYEDVRSTILAIDNLNGIELGGRIICVDHA 111
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL + + +K AF+ +GEVV+ +++T++ + + G FV F+ ESA A+ M
Sbjct: 38 LFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAM 97
Query: 137 NGKFFYGRFILVKIAE 152
+G+ GR I V A
Sbjct: 98 DGQDLNGRNIRVSYAN 113
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL + + ++ AF +FG+V+ K++T + + G FV F R++ A A+E+M
Sbjct: 22 LYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFKREDEAKEALESM 81
Query: 137 NGKFFYGRFILVKIAET 153
+GK F GR I V A+T
Sbjct: 82 DGKDFAGRSIRVDYAKT 98
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+ + +AFSQ+GE+++ KI+ ++ + + G FV F ++S A+E MN
Sbjct: 11 FVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
G+ GR I V A++
Sbjct: 71 GQTLDGRNITVNEAQS 86
>gi|348582138|ref|XP_003476833.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Cavia porcellus]
Length = 482
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
TS T +++K E M + R++ FS++G + VK++T+ K G FV F E+A
Sbjct: 298 TSEFTNVYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTDSSGKSK-GFGFVSFDSHEAAK 356
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
AVE MNGK G+ + V A+
Sbjct: 357 KAVEEMNGKDINGQLVFVGRAQ 378
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + R+++AFS FG + +VK++ E+ ++ G V FS E A A+ M
Sbjct: 407 LYIKNLDDTVDDDRLRRAFSSFGSISRVKVMEEEGQRKGFG--LVCFSSPEEAAKAMTQM 464
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 465 NGRVLGSKPLNIALAK 480
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+ IK L S+ + + FS FG ++ K++++ + G AFV F + +AD A++ M
Sbjct: 212 VIIKNLDRSVDNKTLYEHFSGFGRILSSKVMSDDQGSK--GYAFVHFQSQSAADCAIQEM 269
Query: 137 NGKFFYGRFILV 148
NGK R +LV
Sbjct: 270 NGKVIRDRQVLV 281
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L TE + + FS G V+ ++I + +++PLG A+V F R A A++ M
Sbjct: 124 LYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQKALDTM 183
Query: 137 N 137
N
Sbjct: 184 N 184
>gi|340546029|gb|AEK51813.1| cytoplasmic poly(A) binding protein 1 [Alligator mississippiensis]
gi|402697275|gb|AFQ90825.1| polyA-binding protein cytoplasmic 1, partial [Anniella pulchra]
gi|402697277|gb|AFQ90826.1| polyA-binding protein cytoplasmic 1, partial [Chelydra serpentina]
gi|402697281|gb|AFQ90828.1| polyA-binding protein cytoplasmic 1, partial [Cyrtodactylus sp.
JJF-2012]
gi|402697287|gb|AFQ90831.1| polyA-binding protein cytoplasmic 1, partial [Draco beccarii]
gi|402697289|gb|AFQ90832.1| polyA-binding protein cytoplasmic 1, partial [Draco sumatranus]
Length = 177
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 88 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 146
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 147 EMNGKELNGKQIYVGRAQ 164
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 80 KGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG- 138
K L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E MNG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKMNGM 58
Query: 139 -----KFFYGRF 145
K F GRF
Sbjct: 59 LLNDRKVFVGRF 70
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL E +K AFSQ+G+V+ V+++ + + G FV FS + A A++ +
Sbjct: 61 LFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAALQKL 120
Query: 137 NGKFFYGRFILVKIAET 153
NG+ GR I V A +
Sbjct: 121 NGQVLDGRNIRVHYANS 137
>gi|313240680|emb|CBY33001.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ +P S TE + FS GEVV+ +I+T++ + +P G F FS + S A++ +
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 137 NGKFFYGRFILVKIAE 152
NG+ F GR + V A+
Sbjct: 147 NGQDFNGRALRVDHAK 162
>gi|426247620|ref|XP_004023599.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ovis aries]
Length = 383
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G+ + VK++T+ K G FV F E+A AVE
Sbjct: 185 TNVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEAAKRAVE 243
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ + V A+
Sbjct: 244 EMNGKDINGQLLFVGRAQ 261
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L S+ + + FS FG+++ K++++ + G AFV F + +AD A+E M
Sbjct: 95 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDHGSR--GYAFVHFQNQIAADRAIEEM 152
Query: 137 NG------KFFYGRF 145
NG + F GRF
Sbjct: 153 NGTLLKDCRLFVGRF 167
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L E++ + ++++ FS FG + +VK++ E+ + G + FS E A A+ M
Sbjct: 290 LYIKNLDETIDDEKLRREFSSFGSISRVKVMQEEGRSKGFG--LICFSSAEEATKAMTEM 347
Query: 137 NGK 139
NG+
Sbjct: 348 NGR 350
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL E +K+AFSQ+G+V++ +++ ++ + + G F+ F E A A++ M
Sbjct: 42 LFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAM 101
Query: 137 NGKFFYGRFILVKIA 151
+G+ +GR I V A
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|221482177|gb|EEE20538.1| RNA binding protein, putative [Toxoplasma gondii GT1]
gi|221502447|gb|EEE28174.1| RNA binding protein, putative [Toxoplasma gondii VEG]
Length = 371
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 36 TSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAF 95
TS+++ + SR S T + S S S +S S+R I++ LP+ E +++K F
Sbjct: 101 TSDHTHDLGKSR-----SRTTTGTRSEQSRSKKSLVSNRGVIYLGHLPQGFFEPQLRKFF 155
Query: 96 SQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKI 150
SQFG+V +V++ K + G AFV F E AD+ E MN +GR ++ +
Sbjct: 156 SQFGKVTRVELRRSKRTGNSKGFAFVEFELPEVADIVAEAMNNYMMFGRTLVCHV 210
>gi|237843123|ref|XP_002370859.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|211968523|gb|EEB03719.1| RNA binding protein, putative [Toxoplasma gondii ME49]
Length = 371
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 36 TSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAF 95
TS+++ + SR S T + S S S +S S+R I++ LP+ E +++K F
Sbjct: 101 TSDHTHDLGKSR-----SRTTTGTRSEQSRSKKSLVSNRGVIYLGHLPQGFFEPQLRKFF 155
Query: 96 SQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKI 150
SQFG+V +V++ K + G AFV F E AD+ E MN +GR ++ +
Sbjct: 156 SQFGKVTRVELRRSKRTGNSKGFAFVEFELPEVADIVAEAMNNYMMFGRTLVCHV 210
>gi|32489985|emb|CAE05015.1| OSJNBa0044M19.2 [Oryza sativa Japonica Group]
Length = 650
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++I LP ++ + + FSQFGE+V K++ ++++ Q G FV +S A+ A+
Sbjct: 307 TNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIA 366
Query: 135 NMNGKFFYGRFILVKIA 151
MNG GR I V++A
Sbjct: 367 AMNGYHLEGRVIAVRVA 383
>gi|326469216|gb|EGD93225.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326479280|gb|EGE03290.1| U2 snRNP component IST3 [Trichophyton equinum CBS 127.97]
Length = 276
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+D I+I GLP ++EG + FSQ+G V + +V +K + + G AF+ + + S
Sbjct: 27 ADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRS 86
Query: 129 ADLAVENMNGKFFYGRFILV 148
DLAV+N+ G GR + V
Sbjct: 87 TDLAVDNLGGATVLGRVLRV 106
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 32 SKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRV 91
S+AL++ NS+ + Y+ S+ SNS + T + I LP++MT+ V
Sbjct: 15 SQALSNGNSN-----QCYASSSMLP----SNSPTLENDGEAKATNLIINYLPQNMTQEEV 65
Query: 92 KKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
FS GE+ K+V +K++ Q LG FV + R+E A AV ++NG + I V A
Sbjct: 66 HALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVTSLNGLRLQNKTIKVSFA 125
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL ++M++ ++ F FG+++ +I+++ ++ G FV F RK A+ A+E +
Sbjct: 137 LYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIEKL 196
Query: 137 NGKFFYG 143
NGK G
Sbjct: 197 NGKIPAG 203
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 64 SNSTESDTSSRTG--IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
+NST + TG IF+ LP + + + F FG V+ VKI+ + + + G FV
Sbjct: 314 ANSTPCASVVGTGWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFV 373
Query: 122 WFSRKESADLAVENMNGKFFYGRFILV 148
+ E A A+ ++NG R + V
Sbjct: 374 TMGQYEDAVTAITSLNGTQLGNRTLQV 400
>gi|57106414|ref|XP_534835.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Canis lupus familiaris]
Length = 217
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+ S + ++++F+++GEV+ VK++ ++ + + G FV F+ E A A++ M
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGM 101
Query: 137 NGKFFYGRFILVKIA 151
+G+ +GR I V A
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+ S + ++++F+++GEV+ VK++ ++ + + G FV F+ E A A++ M
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGM 101
Query: 137 NGKFFYGRFILVKIA 151
+G+ +GR I V A
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|310797734|gb|EFQ32627.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 331
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP M+EG V FSQFGE V +K+ +K + + G ++ + + S DLAV+N+
Sbjct: 35 IYFGGLPYEMSEGDVITVFSQFGEPVWLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
G R I V A RYKF
Sbjct: 95 GGATIKDRLISVDHA------------RYKF 113
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 59 SGSNSSNSTESD-TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
+G + N + SD S+ + IF+ GL +TE + + FSQFGEVV VKI K G
Sbjct: 315 AGGHGGNGSLSDGESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSVKIPVGK------G 368
Query: 118 SAFVWFSRKESADLAVENMNG 138
FV F+ ++SA+ A+ N+NG
Sbjct: 369 CGFVQFANRQSAEEAIGNLNG 389
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP S+T+ ++ FS+FGEV K++ ++ + + G AFV S A A++ +
Sbjct: 31 IYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAIDGL 90
Query: 137 NGKFFYGRFILVKIAET-----GLSKNRGRRTRY 165
NG+ GR I+V +A G RG R+ Y
Sbjct: 91 NGQSVDGRSIVVNLARPREDRGGSDGYRGGRSSY 124
>gi|12321948|gb|AAG51005.1|AC069474_4 unknown protein; 13339-10119 [Arabidopsis thaliana]
Length = 674
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D SSRT IF+ + T+ + + F++FGEV++ IVT+ + QP GSA++ F+RKE+A
Sbjct: 512 DASSRT-IFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 570
Query: 130 DLAVENMNGKFFYGRFILV 148
+ A+ +++G F R + +
Sbjct: 571 ENAL-SLDGTSFMSRILKI 588
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP ++EG + FSQ+GE V + + +K + + G ++ + + S +LAV+N+
Sbjct: 35 VFIGGLPYELSEGDIIAIFSQYGEPVHLHLARDKDTGKSRGFGWLKYEDQRSTNLAVDNL 94
Query: 137 NGKFFYGRFILVKIAE 152
G GR I V AE
Sbjct: 95 TGAVVLGRTIRVDHAE 110
>gi|391333252|ref|XP_003741033.1| PREDICTED: ELAV-like protein 2-like [Metaseiulus occidentalis]
Length = 409
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 67 TESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRK 126
+ S+ S T ++I+G+P++ ++ F FG +VQ +++ + + G AF + K
Sbjct: 95 SNSNHSKNTNVYIRGVPKNFDPDELENLFGTFGRLVQFRVLRDLSTNVNKGVAFALYDDK 154
Query: 127 ESADLAVENMNGKFFYG--RFILVKIAETGLSKNRGRR 162
E+AD A+++M+GK G + VKIA+ + + R+
Sbjct: 155 ENADRAIQDMDGKTLNGGTEPLQVKIADDQMKLKKHRQ 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
SN + + S + + + LP+ +++ F Q G + KIV KL+ G F
Sbjct: 2 SNCYGTHPGEVPSSSNLIVNYLPQKLSDQEFYDLFGQIGRIKTCKIVRNKLTGYSYGFGF 61
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
V + E A A+ NG + + V IA+
Sbjct: 62 VDYHDPEDAKKAIGVYNGFKMNNKTLKVAIAK 93
>gi|313224670|emb|CBY20461.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ +P S TE + FS GEVV+ +I+T++ + +P G F FS + S A++ +
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 137 NGKFFYGRFILVKIAE 152
NG+ F GR + V A+
Sbjct: 147 NGQDFNGRALRVDHAK 162
>gi|320162903|gb|EFW39802.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 293
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+ + G P +TEG + SQ+GE+V + +V +K + + LG F+ + + S LAV+N+
Sbjct: 39 VHVGGFPYELTEGDLLCVMSQYGEIVDINLVRDKKTNKSLGYCFIAYEDQRSTVLAVDNL 98
Query: 137 NGKFFYGRFILVK 149
NG R I V
Sbjct: 99 NGIKIGNRTIRVD 111
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 48/76 (63%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T +K+AFS+FG+V++ +++T+++S G FV ++ + A A++ M
Sbjct: 38 LFVSGLNKRTTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 97
Query: 137 NGKFFYGRFILVKIAE 152
+GKF G I + A+
Sbjct: 98 DGKFLDGWVIFAEYAK 113
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK+VT++ K G FV F R E A AV+
Sbjct: 236 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDESGKSK-GFGFVSFERHEDARKAVD 294
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 295 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 326
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 146 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 203
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 204 NGMLLNDRKVFVGRF 218
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 341 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 398
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 399 NGRIVATKPLYVALAQ 414
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ FS++G+ + VK++T+ K G FV F E+A AVE
Sbjct: 289 TNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEAAKKAVE 347
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ + V A+
Sbjct: 348 EMNGKDINGQLLFVGRAQ 365
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L S+ + + FS FG+++ K++++ + G AFV F + +AD A+E M
Sbjct: 199 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQGSR--GYAFVHFQNQIAADRAIEEM 256
Query: 137 NG------KFFYGRF 145
NG + F GRF
Sbjct: 257 NGALLKDCRLFVGRF 271
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++ + FS FG + +VKI+ E+ + G + FS E A A+ M
Sbjct: 394 LYIKNLDDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFG--LICFSSPEEATKAMAEM 451
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
NG+ + + + +A+ +N
Sbjct: 452 NGRILGSKPLYIALAQKPXERN 473
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + K FS G V+ ++I + ++++ LG A+V F + A A++ M
Sbjct: 111 LYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQRALDTM 170
Query: 137 N 137
N
Sbjct: 171 N 171
>gi|11994405|dbj|BAB02407.1| unnamed protein product [Arabidopsis thaliana]
Length = 662
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D SSRT IF+ + T+ + + F++FGEV++ IVT+ + QP GSA++ F+RKE+A
Sbjct: 500 DASSRT-IFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 558
Query: 130 DLAVENMNGKFFYGRFILV 148
+ A+ +++G F R + +
Sbjct: 559 ENAL-SLDGTSFMSRILKI 576
>gi|241605858|ref|XP_002406132.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215502625|gb|EEC12119.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 114
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G N S IF+ GL +TEG + FSQFGE+V + ++ +K + + G
Sbjct: 21 GINEKTSWHKKYKDSAWIFVGGLDYELTEGDIICVFSQFGEIVNINLIRDKKTGKSKGYC 80
Query: 120 FVWFSRKESADLAVENMNG 138
F+ F + S L+V+N+NG
Sbjct: 81 FLCFEDQRSTVLSVDNLNG 99
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 58 CSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
CS SN+TE S+T + + LP++MT+ +K F GE+ K+V +K++ Q LG
Sbjct: 23 CSSPVESNNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 79
Query: 118 SAFVWFSRKESADLAVENMNG 138
FV + + A+ A+ +NG
Sbjct: 80 YGFVNYIDPKDAEKAINTLNG 100
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 125 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 184
Query: 137 NGK 139
NG+
Sbjct: 185 NGQ 187
>gi|403358378|gb|EJY78834.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 403
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GL M EG + FSQFGEVV ++ ++ + + G AF+ + ++S LAV+N+
Sbjct: 35 IYIGGLNYRMNEGDIAIVFSQFGEVVDCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNL 94
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 95 NGIDLCGRLISV 106
>gi|340546031|gb|AEK51814.1| cytoplasmic poly(A) binding protein 1 [Heteronotia binoei]
Length = 177
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 88 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 146
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 147 EMNGKELNGKQIYVGRAQ 164
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 80 KGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG- 138
K L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E MNG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYG--FVHFETQEAAERAIEKMNGM 58
Query: 139 -----KFFYGRF 145
K F GRF
Sbjct: 59 LLNDRKVFVGRF 70
>gi|223938562|ref|ZP_03630454.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892824|gb|EEF59293.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 120
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++++ LP ++TE R+++ FSQ G V++VK++ + + +P G AFV + E A A++++
Sbjct: 5 LYVESLPATVTESRLQELFSQKGPVIEVKLMVDAATGRPSGRAFVTMATAEVAQSALKSL 64
Query: 137 NGKFFYGRFILVKIA 151
+G GR ++V A
Sbjct: 65 HGHNLDGRHLVVAEA 79
>gi|146416285|ref|XP_001484112.1| hypothetical protein PGUG_03493 [Meyerozyma guilliermondii ATCC
6260]
Length = 235
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
SN + T+ + R I++ LP + E +++ F QFGE+ +++I K + + F
Sbjct: 80 SNVARKTDKSKNKRGVIYVGRLPHGLYEKEMRQYFDQFGEISRLRISRNKKTGKSKHYGF 139
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKIAETG 154
+ F KE A +A E MN +G + V++ E
Sbjct: 140 IEFQDKEVAKIACEAMNNYLVFGHMLQVQMVEEA 173
>gi|347839370|emb|CCD53942.1| hypothetical protein [Botryotinia fuckeliana]
Length = 325
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+GE + ++ +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFELSEGDILTIFSQYGEPTYINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGAVIAGRTLKV 106
>gi|145338423|ref|NP_566430.3| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332641706|gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 638
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D SSRT IF+ + T+ + + F++FGEV++ IVT+ + QP GSA++ F+RKE+A
Sbjct: 476 DASSRT-IFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 534
Query: 130 DLAVENMNGKFFYGRFILV 148
+ A+ +++G F R + +
Sbjct: 535 ENAL-SLDGTSFMSRILKI 552
>gi|427781965|gb|JAA56434.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 109
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL +TEG V FSQ+GEVV + ++ +K + + G F+ + + S L+V+N+
Sbjct: 38 IFIGGLDYQLTEGDVICVFSQYGEVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNL 97
Query: 137 NG 138
NG
Sbjct: 98 NG 99
>gi|410929842|ref|XP_003978308.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Takifugu
rubripes]
Length = 341
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI G P ++EG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N
Sbjct: 38 VFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP ++EG + FSQFGE V +K+V +K + + G ++ + + S DLAV+N+
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR I V A
Sbjct: 95 GGAEIGGRLIRVDHA 109
>gi|322697734|gb|EFY89510.1| U2 snRNP component IST3 [Metarhizium acridum CQMa 102]
Length = 308
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP +TEG + FSQFGE V +K+ +K + + G ++ + + S DLAV+N+
Sbjct: 35 IYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR I V A
Sbjct: 95 GGADIGGRMISVDHA 109
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ F ++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 178 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSK-GFGFVSFEKHEEANKAVE 236
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ + V A+ + + + R++
Sbjct: 237 EMNGKDINGKMVFVGRAQKKVERQAELKRRFE 268
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 88 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 145
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 146 NGMLLNDRKVFVGRF 160
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E+ + G FV FS E A AV M
Sbjct: 283 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFG--FVCFSSPEEATKAVTEM 340
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 341 NGRIVGSKPLYVALAQ 356
>gi|402697293|gb|AFQ90834.1| polyA-binding protein cytoplasmic 1, partial [Oscaecilia
ochrocephala]
Length = 177
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F ++G + VK++T++ K G FV F R E A AV+
Sbjct: 88 TNVYIKNFGEDMDDERLKEVFGKYGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 146
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 147 XMNGKELNGKXIYVGRAQ 164
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 80 KGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG- 138
K L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E MNG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYG--FVXFETQEAAERAIEKMNGM 58
Query: 139 -----KFFYGRF 145
K F GRF
Sbjct: 59 LLNDRKVFVGRF 70
>gi|380479686|emb|CCF42869.1| U2 snRNP component IST3 [Colletotrichum higginsianum]
Length = 333
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP M+EG V FSQFGE V +K+ +K + + G ++ + + S DLAV+N+
Sbjct: 35 IYFGGLPYEMSEGDVITVFSQFGEPVWLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
G R I V A RYKF
Sbjct: 95 GGATIKDRLISVDHA------------RYKF 113
>gi|326507358|dbj|BAK03072.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GL TE +++AF +FG+V++ ++VTE+ + + G FV FS + D+A+ M
Sbjct: 9 IFVGGLSWDTTERTLERAFGEFGKVIETQVVTERDTGRSRGFGFVTFSEPRAVDVAIREM 68
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
+ GR I V A+ ++ N
Sbjct: 69 HNGELDGRTISVNKAQPRVNSN 90
>gi|302663591|ref|XP_003023436.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291187433|gb|EFE42818.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 277
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP ++EG + FSQ+G V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRVLRV 106
>gi|190347167|gb|EDK39395.2| hypothetical protein PGUG_03493 [Meyerozyma guilliermondii ATCC
6260]
Length = 235
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
SN + T+ + R I++ LP + E +++ F QFGE+ +++I K + + F
Sbjct: 80 SNVARKTDKSKNKRGVIYVGRLPHGLYEKEMRQYFDQFGEISRLRISRNKKTGKSKHYGF 139
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKIAETG 154
+ F KE A +A E MN +G + V++ E
Sbjct: 140 IEFQDKEVAKIACEAMNNYLVFGHMLQVQMVEEA 173
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 46 SRIYSHPSLQTKCSGSNSSNSTESDTSS------RTGIFIKGLPESMTEGRVKKAFSQFG 99
+++ + P+ GSN+ N+ S S +T + + LP+SMT+ +K F G
Sbjct: 11 TQLSNGPTCNNTAHGSNAINNCSSPIDSGNTEDSKTNLIVNYLPQSMTQEELKSLFGSIG 70
Query: 100 EVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
E+ K+V +K++ Q LG FV + + A+ A+ +NG
Sbjct: 71 EIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTLNG 109
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAIKGL 193
Query: 137 NGK 139
NG+
Sbjct: 194 NGQ 196
>gi|395754448|ref|XP_003780626.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pongo abelii]
Length = 317
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N N
Sbjct: 5 LLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFN 64
Query: 138 GKFFYGRFILV 148
G GR I V
Sbjct: 65 GIKIKGRTIRV 75
>gi|354502961|ref|XP_003513550.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cricetulus griseus]
Length = 216
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V I+ +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSALNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL TE + + FSQ+G+VV+ KIV +++S + G FV F+ +E A A M
Sbjct: 36 LFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKARTEM 95
Query: 137 NGKFFYGRFILVKIAE 152
+GK GR I V A+
Sbjct: 96 DGKELNGRTIFVDYAK 111
>gi|189242406|ref|XP_001810193.1| PREDICTED: similar to putative peptidyl-prolyl cis-trans isomerase
E [Tribolium castaneum]
gi|270016278|gb|EFA12724.1| hypothetical protein TcasGA2_TC002359 [Tribolium castaneum]
Length = 302
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T S+ I++ GL E + + + AF FG++V ++I + +++ G AF+ F E A
Sbjct: 3 TGSKRTIYVGGLAEEVDDKVLNAAFIPFGDIVDIQIPLDYETEKHRGFAFIEFESAEDAA 62
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
A++NMN +GR I V +A+
Sbjct: 63 AAIDNMNDSELFGRTIRVNLAK 84
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T I+IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 242 SKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 300
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 301 AKKAVEEMNGRDINGQLIFVGRAQ 324
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 152 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 209
Query: 131 LAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
A+E MNGK G + V G KNR R
Sbjct: 210 RAIEEMNGKLLKGCKVFV-----GRFKNRKDR 236
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 353 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEM 410
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 411 NGRILGSKPLSIALAQ 426
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 130 NFDIIKGKSI 139
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T I+IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 242 SKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 300
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 301 AKKAVEEMNGRDINGQLIFVGRAQ 324
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 152 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 209
Query: 131 LAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
A+E MNGK G + V G KNR R
Sbjct: 210 RAIEEMNGKLLKGCKVFV-----GRFKNRKDR 236
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 353 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEM 410
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 411 NGRILGSKPLSIALAQ 426
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 130 NFDIIKGKSI 139
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD+S IF+ G+P + E +++ F +FG V +V ++ + ++P G F+ F ++S
Sbjct: 106 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 165
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
D AV NM+ + G+ + VK AE SKN+
Sbjct: 166 VDQAV-NMHFRDIMGKKVEVKRAEPRDSKNQ 195
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
NS +D + +F+ GL S T+ ++ FSQ+GEVV I+ +K + Q G FV F
Sbjct: 2 NSAGADEIGK--LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>gi|390359786|ref|XP_003729564.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like
[Strongylocentrotus purpuratus]
Length = 220
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ LP++ EGR++K F FG++ QV ++ K S G F+ F E A+ A++ M
Sbjct: 18 IFVSNLPKTWDEGRMEKLFETFGKISQVNLMKNKESGDSRGFGFITFDTAEDANDAIQGM 77
Query: 137 NGKFFYGRFILVKIA 151
NGK G + V A
Sbjct: 78 NGKDVEGVQLKVDAA 92
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + ++KAFSQFGE+V+ K++ ++ + + G FV F+ +++ A+E MN
Sbjct: 11 FVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
G+ GR I V A++
Sbjct: 71 GQNLDGRNITVNEAQS 86
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + + AFS +GEV++ KI+ ++ +++ G FV FS +E+ A+E MN
Sbjct: 11 FVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNEAQS 86
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + + F +FG+V+ VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDEGGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + ++
Sbjct: 250 EMNGKELNGKHIYVGPAQKKVDRH 273
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFG--FVCFSSPEEATKAVSEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +++ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVCDENGSK--GHGFVHFETEEAAERAIEKM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDARKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGTLLNDRKVFVGRF 173
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + ++KAFSQ+GE+V KI+ ++ + + G FV F+ ++S + A+E MN
Sbjct: 9 FVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEAMN 68
Query: 138 GKFFYGRFILVKIAE 152
G+ GR I V A+
Sbjct: 69 GQDLDGRNITVNQAQ 83
>gi|297824993|ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326218|gb|EFH56638.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
+ E S T + + GLP S+T ++++AFS+ G V + ++T K S + G AFV F+
Sbjct: 10 DGEEKSPQSATTVCVSGLPYSITNAQLEEAFSEVGPVRRCYLITNKGSNEHRGFAFVTFA 69
Query: 125 RKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTR 164
E + A+E NG F GR I VK A T + RRT+
Sbjct: 70 LPEDVNRAIELKNGSTFGGRRITVKQA-TNRPSLKERRTK 108
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 35 LTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKA 94
L ++++ V+ S S P K + E++ RT +FI+ +P +T+ VK+
Sbjct: 505 LKNSSTKPVADSSGVSEPLKSGKTKEVAPKETQENEHFERT-LFIRNIPFDVTKEEVKQK 563
Query: 95 FSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN-----GKFFYGRFILV 148
F+ FGEV + +V K++K+P G+AF+ F + +++ A+ N G GR + V
Sbjct: 564 FAVFGEVESLFLVLNKVTKRPEGTAFLKFKKADASVAAISAANTASGVGVLLKGRQLNV 622
>gi|209155462|gb|ACI33963.1| ELAV-like protein 1 [Salmo salar]
Length = 342
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 46/71 (64%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SDT ++I GLP++MT+ V+ F+++G ++ +++ ++ S G AF+ F ++
Sbjct: 116 SDTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQASGLSRGVAFIRFDKRAE 175
Query: 129 ADLAVENMNGK 139
A+ A++++NG+
Sbjct: 176 AEDAIKDLNGQ 186
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T ++T + + LP+SM++ ++ FS GEV K++ +K++ LG FV + A+
Sbjct: 32 TDAKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLTPSDAE 91
Query: 131 LAVENMNG 138
A+ +NG
Sbjct: 92 RAINTLNG 99
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L + EG + + F FG V VK++ + + + G FV + E A +A+ ++
Sbjct: 262 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIGSL 321
Query: 137 NG 138
NG
Sbjct: 322 NG 323
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 46 SRIYSHPSLQTKCSGSNSSNSTESDTSS------RTGIFIKGLPESMTEGRVKKAFSQFG 99
+++ + P+ GSN+ N+ S S +T + + LP+SMT+ +K F G
Sbjct: 3 TQLSNGPTCNNTAHGSNAINNCSSPIDSGNTEDSKTNLIVNYLPQSMTQEELKSLFGSIG 62
Query: 100 EVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
E+ K+V +K++ Q LG FV + + A+ A+ +NG
Sbjct: 63 EIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTLNG 101
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 126 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAIKGL 185
Query: 137 NGK 139
NG+
Sbjct: 186 NGQ 188
>gi|345564220|gb|EGX47200.1| hypothetical protein AOL_s00097g39 [Arthrobotrys oligospora ATCC
24927]
Length = 333
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 47 RIYSHPSLQTKCSGSNSSNSTESDTSSRTG--IFIKGLPESMTEGRVKKAFSQFGEVVQV 104
R + P + S E D S TG +F+ G+ +TE V + F ++GE+++
Sbjct: 47 RADARPDPSDTTDRRDKDASPEKDGSRNTGTNLFVTGIHPRLTEEDVTRLFGKYGEIIKC 106
Query: 105 KIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
I+ + +K+ G FV F++ + AD A + + G+ + GR + ++ A
Sbjct: 107 NIMVDPHTKESRGFGFVNFAQSDQADAAKDALQGEVYEGRTLSIEKA 153
>gi|339898392|ref|XP_003392565.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321399546|emb|CBZ08733.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 693
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 38 NNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQ 97
N+++S S+S Q SG +S+ +D R+ +F+ GLP S+ + + + F +
Sbjct: 201 NDNTSTSLS--------QATSSGIATSSGQPNDAEVRSNLFVCGLPVSVRDKELLELFEK 252
Query: 98 FGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSK 157
GE+ K++ + + + G AFV F E A+ AV+ +NG G I V++A + +
Sbjct: 253 HGEIESAKVMLDIHTGRSRGIAFVKFKNVEHAENAVDALNGTTVNGHQITVRVANSRAAY 312
Query: 158 NRGRRTRYKF 167
G T F
Sbjct: 313 LPGNPTNKTF 322
>gi|308503018|ref|XP_003113693.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
gi|308263652|gb|EFP07605.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
Length = 302
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GL ++TEG V FSQ+GEV+ + ++ +K + + G AF+ + + S LAV+N
Sbjct: 40 IYIGGLSYALTEGDVIAVFSQYGEVMNINLIRDKETGKSKGFAFLCYKDQRSTVLAVDNF 99
Query: 137 NGKFFYGRFILVKIAE 152
NG + R I V E
Sbjct: 100 NGISLHKRMIRVDHVE 115
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++I L S+T+ ++ AF +FG V K+VT++ S++ G FV F + E A A+E
Sbjct: 2 TRLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIE 61
Query: 135 NMNGKFFYGRFILVKIA 151
MN + GR I V ++
Sbjct: 62 EMNEQELEGRRIKVDVS 78
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + + F +FG+++ VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
MNGK G+ I V A+ +R ++KF
Sbjct: 250 EMNGKELNGKHIYVGRAQK--KDDRHTELKHKF 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +++ + FS FG ++ K+V+++ + G FV F +E+A+ A+E M
Sbjct: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSK--GHGFVHFETEEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFG--FVCFSSPEEATKAVSEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F Q+G + VK++T+ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSR-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
+MNGK G+ I V A+ + + + +++
Sbjct: 250 DMNGKDLNGKAIFVGRAQKKVERQTELKRKFE 281
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A++ M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIDKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K F+ FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFTPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T I+IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 241 SKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 299
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 300 AKKAVEEMNGRDINGQLIFVGRAQ 323
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 151 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 208
Query: 131 LAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
A+E MNGK G + V G KNR R
Sbjct: 209 RAIEEMNGKLLKGCKVFV-----GRFKNRKDR 235
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 352 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEM 409
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 410 NGRILGSKPLSIALAQ 425
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 69 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 128
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 129 NFDIIKGKSI 138
>gi|62473376|ref|NP_001014713.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|221329608|ref|NP_001138142.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
gi|2961399|emb|CAA18091.1| EG:65F1.2 [Drosophila melanogaster]
gi|61677860|gb|AAX52472.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|220901638|gb|ACL82875.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
Length = 479
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS------ 112
+GS S N + T +RT + + LP++MTE ++ FS GE+ VK++ +K
Sbjct: 129 AGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 188
Query: 113 -------KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + R + A+ AV +NG + I V A
Sbjct: 189 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFA 234
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSK-QPLGSAFVWFSRKE 127
SD +++ GLP++MT+ ++ F+ FG ++ +I+ + Q G F+ F ++E
Sbjct: 238 SDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKRE 297
Query: 128 SADLAVENMNG 138
A A+ +NG
Sbjct: 298 EATRAIIALNG 308
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L E + + F FG V VKIV + + Q G FV + + A +A+ +
Sbjct: 400 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 459
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 460 NGYTMGNRVLQV 471
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + ++K+AFS FG++V+ K++ ++ S + G AFV ++ E A+ A E M
Sbjct: 35 LFVSGLCRLTIDEKLKEAFSSFGQLVEAKVIIDRASGRSKGFAFVTYTTIEEAEKAREGM 94
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 95 NAKFLDGWVIFVDPAK 110
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 58 CSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
CS SN+TE S+T + + LP++MT+ +K F GE+ K+V +K++ Q LG
Sbjct: 52 CSSPVESNNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 108
Query: 118 SAFVWFSRKESADLAVENMNG 138
FV + + A+ A+ +NG
Sbjct: 109 YGFVNYIDPKDAEKAINTLNG 129
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 154 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 213
Query: 137 NGK 139
NG+
Sbjct: 214 NGQ 216
>gi|195469519|ref|XP_002099685.1| GE16581 [Drosophila yakuba]
gi|194187209|gb|EDX00793.1| GE16581 [Drosophila yakuba]
Length = 478
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS------ 112
+GS S N + T +RT + + LP++MTE ++ FS GE+ VK++ +K
Sbjct: 128 AGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 187
Query: 113 -------KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + R + A+ AV +NG + I V A
Sbjct: 188 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFA 233
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSK-QPLGSAFVWFSRKE 127
SD +++ GLP++MT+ ++ F+ FG ++ +I+ + Q G F+ F ++E
Sbjct: 237 SDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKRE 296
Query: 128 SADLAVENMNG 138
A A+ +NG
Sbjct: 297 EATRAIIALNG 307
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L E + + F FG V VKIV + + Q G FV + + A +A+ +
Sbjct: 399 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 458
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 459 NGYTMGNRVLQV 470
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 44/70 (62%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD ++I GLP++MT+ V+ F+Q+G ++ +I+ ++ S G AF+ F ++
Sbjct: 98 SDGIKDANLYISGLPKTMTQKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSE 157
Query: 129 ADLAVENMNG 138
A+ A++++NG
Sbjct: 158 AEEAIKDLNG 167
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
+ ++T + I LP++M++ ++ FS GEV K++ +K++ LG FV + A+
Sbjct: 14 SDAKTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGYGFVNYVNPSDAE 73
Query: 131 LAVENMNGKFFYGRFILVKIA 151
A+ +NG + I V A
Sbjct: 74 RAINTLNGLRLQSKTIKVSYA 94
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ L + EG + + F FG V VK++ + + + G FV + E A +A+ ++
Sbjct: 242 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSL 301
Query: 137 NG 138
NG
Sbjct: 302 NG 303
>gi|410056965|ref|XP_003954131.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2, partial [Pan troglodytes]
Length = 323
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
+ GLP +TEG + FSQ+GE+V + +V +K + + G F+ + + S LAV+N N
Sbjct: 11 LLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFN 70
Query: 138 GKFFYGRFILV 148
G GR I V
Sbjct: 71 GIKIKGRTIRV 81
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + +K+AF+ FGEV + ++ ++ + + G FV FS ++SA+ A++ M
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 137 NGKFFYGRFILVKIA 151
+GK GR I V +A
Sbjct: 97 DGKELNGRQIRVNLA 111
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + ++ AF+ FG+V+ K++T++ + + G FV FS ++S A+ENMN
Sbjct: 11 FVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNQAQS 86
>gi|406831762|ref|ZP_11091356.1| RNA-binding protein (RRM domain) [Schlesneria paludicola DSM 18645]
Length = 101
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I++ LP +++E + F+++G V V++ T+K + +P G AFV +R E +D A+
Sbjct: 2 TQIYVGNLPFTVSEPDLMGMFARYGRVSSVRMATDKSTGRPRGFAFVTMNRMEDSDEAIV 61
Query: 135 NMNGKFFYGRFILVKIA 151
+NG GR I+V A
Sbjct: 62 RLNGSHLSGRTIVVNEA 78
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + +G +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 208 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSK-GFGFVSYEKHEDANKAVE 266
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 267 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFE 298
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 118 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 175
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 176 NGMLLNDRKVFVGRF 190
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++++ FS FG + K++ E + G FV FS E A AV M
Sbjct: 313 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 370
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 371 NGRIVGSKPLYVALAQ 386
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 30 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 89
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 90 NFDVMKGKPIRI 101
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
SNS + T + I LP++MT+ V FS GE+ K+V +K++ Q LG F
Sbjct: 4 SNSPTLENDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGF 63
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKIA 151
V + R+E A AV ++NG + I V A
Sbjct: 64 VNYIRQEDAYKAVTSLNGLRLQNKTIKVSFA 94
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL ++M++ ++ F FG+++ +I+++ ++ G FV F RK A+ A+E +
Sbjct: 106 LYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIEKL 165
Query: 137 NGKFFYG 143
NGK G
Sbjct: 166 NGKIPAG 172
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 64 SNSTESDTSSRTG--IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
+NST + TG IF+ LP + + + F FG V+ VKI+ + + + G FV
Sbjct: 283 ANSTPCASVVGTGWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFV 342
Query: 122 WFSRKESADLAVENMNGKFFYGRFILV 148
+ E A A+ ++NG R + V
Sbjct: 343 TMGQYEDAVTAITSLNGTQLGNRTLQV 369
>gi|407425857|gb|EKF39534.1| hypothetical protein MOQ_000234 [Trypanosoma cruzi marinkellei]
Length = 604
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAV 133
R+ +F+ GL S+T+ + K F +GE+ K++ + + + G AFV F +A+ A
Sbjct: 239 RSNLFVSGLHASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGIAFVKFKEVANAERAA 298
Query: 134 ENMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
E +N F+G I V++A+ + G T F
Sbjct: 299 EELNNSVFHGENIAVRVAKPHAAYRPGAPTNKTF 332
>gi|346321453|gb|EGX91052.1| RNA binding domain protein [Cordyceps militaris CM01]
Length = 323
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++ GLP ++EG V FSQFGE V +K+V +K S + G ++ + ++S DLAV+N+
Sbjct: 35 VYFGGLPYELSEGDVITIFSQFGEPVFLKLVRDKESGKSKGFGWLKYENQKSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR + V A
Sbjct: 95 GGAQVGGRLLRVDHA 109
>gi|398016131|ref|XP_003861254.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499479|emb|CBZ34552.1| hypothetical protein, conserved [Leishmania donovani]
Length = 693
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 38 NNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQ 97
N+++S S+S Q SG +S+ +D R+ +F+ GLP S+ + + + F +
Sbjct: 201 NDNTSTSLS--------QATSSGIATSSGQPNDAEVRSNLFVCGLPVSVRDKELLELFEK 252
Query: 98 FGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSK 157
GE+ K++ + + + G AFV F E A+ AV+ +NG G I V++A + +
Sbjct: 253 HGEIESAKVMLDIHTGRSRGIAFVKFKNVEHAENAVDALNGTTVNGHQITVRVANSRAAY 312
Query: 158 NRGRRTRYKF 167
G T F
Sbjct: 313 LPGNPTNKTF 322
>gi|414878515|tpg|DAA55646.1| TPA: hypothetical protein ZEAMMB73_431003 [Zea mays]
Length = 113
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL E +K FSQ G+V+ K++ S + G FV FS + AD A++ M
Sbjct: 35 LFVGGLSYDTNETALKDVFSQCGDVIAAKVICHPTSGKSKGFGFVKFSSQNQADAALQKM 94
Query: 137 NGKFFYGRFILVKIAE 152
NG+ GR I V A
Sbjct: 95 NGQVLDGRKIRVHYAN 110
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T I+IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 242 SKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 300
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 301 AKKAVEEMNGRDINGQLIFVGRAQ 324
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 152 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 209
Query: 131 LAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
A+E MNGK G + V G KNR R
Sbjct: 210 RAIEEMNGKLLKGCKVFV-----GRFKNRKDR 236
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 353 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEM 410
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 411 NGRILGSKPLSIALAQ 426
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 130 NFDMIKGKSI 139
>gi|47221432|emb|CAF97350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G + S S+ +FI G P ++EG + FSQ+GE+V + +V +K + + G
Sbjct: 20 GVKETVSWHSEYKDSAWVFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFC 79
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ + + S LAV+N NG GR + V
Sbjct: 80 FLCYEDQRSTILAVDNFNGIKIKGRTLRV 108
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+++ FS+FG+ + VK++ + + G FV F + E A AV
Sbjct: 191 TNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNGRS-KGFGFVNFEKHEEAQKAVA 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
+MNGK GR + V A+ L +
Sbjct: 250 DMNGKEINGRLLYVGRAQKRLERQ 273
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS +G + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGRSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVSTKPLYVALAQ 369
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G FV F E+A A+E M
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSR--GYGFVHFETHEAATRAIETM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|402870468|ref|XP_003899242.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Papio anubis]
Length = 496
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T I+IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 310 SKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSRGKSK-GFGFVSFDSHEA 368
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 369 AKKAVEEMNGRDINGQLIFVGRAQ 392
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 220 RSGIGNVFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 277
Query: 131 LAVENMNG------KFFYGRF 145
A+E MNG K F GRF
Sbjct: 278 RAIEEMNGRLLKSCKVFVGRF 298
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +++ + +++ FS FG +++VK++ ++ Q G F+ FS E A A+ M
Sbjct: 421 LYVKNLDDTIDDEKLRNEFSSFGSIIRVKVMQQE--GQSKGFGFICFSSLEDATKAMIEM 478
Query: 137 NGKFFYGRFILVKIAET 153
NG+F + I + +A++
Sbjct: 479 NGRFLGSKPISIALAQS 495
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 138 LYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDTM 197
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 198 NFDIIKGKSI 207
>gi|145345423|ref|XP_001417211.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577438|gb|ABO95504.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 61 SNSSNSTESDTSSRTG-IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
S N+ + + S TG IF++ LP + TE V + F QFG++ V I+ ++ +K+ G A
Sbjct: 319 SKDVNAADMEALSETGRIFVRNLPYTATEEEVAELFEQFGKLTAVHILVDRSTKRSKGLA 378
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFI 146
+V F E A+E ++G F GR I
Sbjct: 379 YVTFVIPEDGVKAMEAVDGSIFQGRLI 405
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S T I ++ + T+ ++K F+ FG++ QV++ +K G AFV F+ + A
Sbjct: 767 SATKIVVRNVAFEATKRDIQKLFNPFGQLKQVRL-PKKFDGAHRGFAFVEFNTRRETQAA 825
Query: 133 VENMNGKFFYGRFILV 148
++ + G YGR I++
Sbjct: 826 MDALRGTHLYGRHIII 841
>gi|452988237|gb|EME87992.1| hypothetical protein MYCFIDRAFT_192265 [Pseudocercospora fijiensis
CIRAD86]
Length = 310
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 56 TKCSGSNSSNSTE-SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQ 114
KC N+S T+ DT+ ++I GLP ++EG + FSQ+G V + +V +K + +
Sbjct: 16 DKCIPPNASWHTDYRDTAY---VYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKDTGK 72
Query: 115 PLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
G F+ + + S DLAV+N++G GR I V
Sbjct: 73 SRGFCFLKYEDQRSCDLAVDNLSGAGVMGRVISV 106
>gi|324512768|gb|ADY45275.1| RNA-binding motif protein, X-linked 2 [Ascaris suum]
Length = 318
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GLP + EG + FSQ+GE+V + ++ + + + G AF+ + + S LAV+N
Sbjct: 40 IYIGGLPYDLNEGDIITVFSQYGEIVNINLIRDHKTGKSRGFAFLCYQDQRSTVLAVDNF 99
Query: 137 NGKFFYGRFILVKIAE 152
NG R I V E
Sbjct: 100 NGIKLLKRMIRVDHVE 115
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 58 CSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
SG S+ +D S R+ +F+ + ++E ++ FS+ G V+ +K+V ++ + +P G
Sbjct: 2 MSGGYKSSGVGNDRSQRS-VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKG 60
Query: 118 SAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLS 156
F+ F ++A++A+ N+NG GR + V A G++
Sbjct: 61 YGFIEFPDIQTAEVAIRNLNGYELSGRILRVDSAAGGMN 99
>gi|18079265|ref|NP_525033.1| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|386763527|ref|NP_001245447.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
gi|119264|sp|P16914.1|ELAV_DROME RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157340|gb|AAA28506.1| elav protein [Drosophila melanogaster]
gi|4455922|emb|CAB37430.1| EG:65F1.2 [Drosophila melanogaster]
gi|15291955|gb|AAK93246.1| LD33076p [Drosophila melanogaster]
gi|22831422|gb|AAF45517.2| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|220946076|gb|ACL85581.1| elav-PA [synthetic construct]
gi|220955740|gb|ACL90413.1| elav-PA [synthetic construct]
gi|383293116|gb|AFH07163.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
Length = 483
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS------ 112
+GS S N + T +RT + + LP++MTE ++ FS GE+ VK++ +K
Sbjct: 133 AGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 192
Query: 113 -------KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + R + A+ AV +NG + I V A
Sbjct: 193 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFA 238
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSK-QPLGSAFVWFSRKE 127
SD +++ GLP++MT+ ++ F+ FG ++ +I+ + Q G F+ F ++E
Sbjct: 242 SDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKRE 301
Query: 128 SADLAVENMNG 138
A A+ +NG
Sbjct: 302 EATRAIIALNG 312
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L E + + F FG V VKIV + + Q G FV + + A +A+ +
Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 464 NGYTMGNRVLQV 475
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + +K AF+ FGEVV+ +++T++ + + G FV FS + A A+
Sbjct: 37 TKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMS 96
Query: 135 NMNGKFFYGRFILVKIAETGLSKNR 159
+M+G+ GR I V A + NR
Sbjct: 97 SMDGQELEGRNIHVNFANERPAGNR 121
>gi|157870247|ref|XP_001683674.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126740|emb|CAJ05119.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 692
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 38 NNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQ 97
N+++S S+S Q SG +S+ +D R+ +F+ GLP S+ + + + F +
Sbjct: 201 NDNTSTSLS--------QATSSGIATSSGQPNDVEVRSNLFVCGLPVSVRDKELLELFEK 252
Query: 98 FGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSK 157
GE+ K++ + + + G AFV F E A+ AV+ +NG G I V++A + +
Sbjct: 253 HGEIESAKVMLDIHTGRSRGIAFVKFKNVEHAENAVDALNGTTVNGHQITVRVANSRAAY 312
Query: 158 NRGRRTRYKF 167
G T F
Sbjct: 313 LPGNPTNKTF 322
>gi|414587608|tpg|DAA38179.1| TPA: hypothetical protein ZEAMMB73_126317 [Zea mays]
Length = 750
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++I LP +M + + FSQFGE+V K++ ++ + Q G FV +S A+ A+
Sbjct: 427 TNLYIGYLPPTMDDAGLVSLFSQFGEIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIA 486
Query: 135 NMNGKFFYGRFILVKIA 151
MNG GR I V++A
Sbjct: 487 AMNGHHLEGRVIAVRVA 503
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 47/75 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ G+ S + ++++F+++GEV+ VK++ ++ + + G F+ F+ E A A++ M
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQGM 101
Query: 137 NGKFFYGRFILVKIA 151
+G+ +GR I V A
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|258405611|ref|YP_003198353.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257797838|gb|ACV68775.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 86
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP S TE V+ AF +GEV VK++ ++ + +P G FV S + + A+EN+
Sbjct: 5 IYVGNLPFSATEDEVRSAFGAYGEVTSVKLIEDRETGRPRGFGFVEMS--DGGEQAIENL 62
Query: 137 NGKFFYGRFILVKIA 151
+G+ F GR + V A
Sbjct: 63 DGQDFGGRTLKVNEA 77
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + +K+AF+ FGEV + ++ ++ + + G FV FS ++SA+ A++ M
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 137 NGKFFYGRFILVKIA 151
+GK GR I V +A
Sbjct: 97 DGKELNGRQIRVNLA 111
>gi|403271841|ref|XP_003927812.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Saimiri boliviensis boliviensis]
Length = 647
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T ++IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 461 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 519
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 520 AKKAVEEMNGRDINGQLIFVARAQ 543
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + + FS FG ++ K++++ + G AFV F + +AD A+E M
Sbjct: 377 VFIKNLDKSIDNKTLYEHFSAFGRILSSKVMSDDQGSK--GYAFVHFQNQSAADRAIEEM 434
Query: 137 NGKFFYGRFILV 148
NGK G + V
Sbjct: 435 NGKLLQGCKVFV 446
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +++ + +++K FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 572 LYVKNLDDTIDDEKLRKEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDALKAMTEM 629
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 630 NGRILGSKPLSIALAQ 645
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 2 ALWLPCPSPFSSLLLGSRQHTKTAIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGS 61
A W C P + L +P S+ L S + + +R +H SG
Sbjct: 234 AAWPLCGDPEAPAL------------QPGQSRGLVSPHGECSASAREQAH-------SGQ 274
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
+ E+ + +++ L +TE + + FS G V+ ++I ++L+++ LG A+V
Sbjct: 275 DEEMDVEAKYRMAS-LYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYV 333
Query: 122 WFSRKESADLAVENMNGKFFYGRFI 146
F A A++ MN G+ I
Sbjct: 334 NFLHLADAQKALDTMNFDVIQGKSI 358
>gi|307108943|gb|EFN57182.1| hypothetical protein CHLNCDRAFT_51257 [Chlorella variabilis]
Length = 105
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 49 YSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVT 108
+ P+L T + + S + T +FI G+P MTE V F ++G V +V+IV
Sbjct: 6 WRRPTLPT-------AGTWRSPPARGTQLFIAGIPFMMTERDVVDKFDRYGPVREVRIVR 58
Query: 109 EKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
+ + G FV E+AD AV ++G + GR +LV++A+
Sbjct: 59 HPATGESRGFGFVAMESVEAADRAVRKLDGTDWNGRRLLVEVAK 102
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
+RT +++ LP ++E +++ F Q+G+V ++ ++ +K++ Q G AFV ++A A
Sbjct: 2 NRTRLYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSA 61
Query: 133 VENMNGKFFYGRFILVKIA 151
++++NG GR I+V A
Sbjct: 62 IDSLNGTSISGRQIVVNEA 80
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N E D + +F++ LP + TE ++K FS++G + ++ + L+K+P G AFV F
Sbjct: 366 NEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFM 425
Query: 125 RKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 426 MPEHAVKAYAGVDGQVFQGRMLHV 449
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPL---GSAFVWFSRKESADLAV 133
+FIK L S TE +K+ FS+ G V I +K L G FV + + E AD A+
Sbjct: 706 VFIKNLNFSTTEETLKEVFSKVGMVKSCSISRKKSKTGELLSMGFGFVEYRKPEQADRAL 765
Query: 134 ENMNGKFFYGRFILVKIAE 152
+ + G G + V+I+E
Sbjct: 766 KQLQGHVVDGHKLEVRISE 784
>gi|2393873|gb|AAB70164.1| poly(A)-binding protein testis-specific isoform [Mus musculus]
Length = 603
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + + F +FG+++ VK++T++ K G FV F R E A AV+
Sbjct: 166 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSK-GFGFVSFERHEDAQKAVD 224
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
MNGK G+ I V A+ +R ++KF
Sbjct: 225 EMNGKELNGKHIYVGRAQK--KDDRHTELKHKF 255
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +++ + FS FG ++ K+V+++ + G FV F +E+A+ A+E M
Sbjct: 76 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSK--GHGFVHFETEEAAERAIEKM 133
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 134 NGMLLNDRKVFVGRF 148
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++TE + G FV FS E A AV M
Sbjct: 271 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFG--FVCFSSPEEATKAVSEM 328
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 329 NGRIVATKPLYVALAQ 344
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+ + +AFSQ+GEV++ KI+ ++ + + G FV F ++S A+E MN
Sbjct: 9 FVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIEGMN 68
Query: 138 GKFFYGRFILVKIAET 153
G+ GR I V A++
Sbjct: 69 GQDLDGRNITVNEAQS 84
>gi|195997877|ref|XP_002108807.1| hypothetical protein TRIADDRAFT_17435 [Trichoplax adhaerens]
gi|190589583|gb|EDV29605.1| hypothetical protein TRIADDRAFT_17435, partial [Trichoplax
adhaerens]
Length = 119
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL +TEG + FSQ+GEVV + + +K + + G F+ + + S LAV+N
Sbjct: 35 VFIGGLAYGLTEGDIITVFSQYGEVVDINYIRDKKTGKTKGYCFLAYEDQRSTTLAVDNF 94
Query: 137 NGKFFYGRFILV 148
NG R I V
Sbjct: 95 NGIKLLDRTIRV 106
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 31 ISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGR 90
+S T NN+++ P+ CS S++TE S+T + + LP++MT+
Sbjct: 5 LSNGPTCNNTANC--------PNTINNCSSPVESSNTED---SKTNLIVNYLPQNMTQEE 53
Query: 91 VKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
+K F GE+ K+V +K++ Q LG FV + + A+ A+ +NG
Sbjct: 54 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 101
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 126 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 185
Query: 137 NGK 139
NG+
Sbjct: 186 NGQ 188
>gi|125548044|gb|EAY93866.1| hypothetical protein OsI_15642 [Oryza sativa Indica Group]
Length = 684
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++I LP ++ + + FSQFGE+V K++ ++++ Q G FV +S A+ A+
Sbjct: 339 TNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIA 398
Query: 135 NMNGKFFYGRFILVKIA 151
MNG GR I V++A
Sbjct: 399 AMNGYHLEGRVIAVRVA 415
>gi|115520925|gb|ABJ08845.1| putative polyadenylate-binding protein 1 [Squalus acanthias]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F++FG + VK++T+ S + G FV F + E A AV+
Sbjct: 123 TNVYIKNFGEDMDDERLKEIFNKFGAFLSVKVMTDD-SGRSKGFGFVSFEKHEDAQKAVD 181
Query: 135 NMNGKFFYGRFILV 148
MNGK GR + V
Sbjct: 182 EMNGKEINGRQVYV 195
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 33 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 90
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 91 NGMLLNDRKVFVGRF 105
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T I+IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 242 SKASEFTNIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 300
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 301 AKKAVEEMNGRDINGQLIFVGRAQ 324
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 152 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 209
Query: 131 LAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
A+E MNGK G + V G KNR R
Sbjct: 210 RAIEEMNGKLLKGCKVFV-----GRFKNRKDR 236
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 353 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEM 410
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 411 NGRILGSKPLSIALAQ 426
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 130 NFDIIKGKSI 139
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N E D + +F++ LP S TE +++ FS+FG + ++ + L+K+P G AFV F
Sbjct: 385 NEEEEDLADSGRLFVRNLPYSSTEEDLEQLFSRFGPLSELHYPIDSLTKKPKGFAFVTFM 444
Query: 125 RKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 445 FPEHAVKAYAEVDGQVFQGRMLHV 468
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
E D IFI+ L + E ++K FS++G++ ++ I SKQ +G AF+ + E
Sbjct: 336 EEDVGDSGRIFIRNLSYTTKEEDLEKVFSKYGKISEIHIPINYESKQSIGIAFILYLIPE 395
Query: 128 SADLAVENMNGKFFYGRFILV 148
+A A+ M+GK F GR I V
Sbjct: 396 NAVTALNEMDGKVFQGRIIHV 416
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 5 LPCPSPFSSLLLGSRQHTKTAIPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSS 64
LPC F + S+Q I R ++ A ++ S+ +S + +++ K N
Sbjct: 713 LPCG--FGFIEFSSKQGAYECIKR--LNGATIDDHEISLKLSD-KNEVNVKAKEMPENKR 767
Query: 65 NSTESDTSSR--TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS---- 118
+S + S+ + I IK LP T ++K F+ +GE+ V+I K+P G
Sbjct: 768 SSLPQNAKSKPSSKIIIKNLPFESTTKEIRKLFAAYGEIQSVRI-----PKKPNGGHRGF 822
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
FV F +E A A+E + FYGR ++++ AE
Sbjct: 823 GFVEFLTEEEAKNAMEALGSSHFYGRHLVLQYAE 856
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S T I +K LP+ +T+ R K+ F +FG V KI+ + + G F+ F+ + SA A
Sbjct: 2 SNTRICVKQLPKHLTDKRFKEHFEKFGVVTDAKIIKKDGKSRLFG--FIGFANENSAKNA 59
Query: 133 VENMNGKFFYGRFILVKIA 151
+ ++NG F I+V+IA
Sbjct: 60 L-SLNGTFIDTSKIVVEIA 77
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
N E D + +FI+ LP + TE +++ FS+FG + ++ + L+K+P G AFV F
Sbjct: 394 ENEEEEDLADSGRLFIRNLPYTSTEEDLQRLFSKFGPLSELHYPIDSLTKKPKGFAFVTF 453
Query: 124 SRKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 454 IFPEHAVRAYAEVDGQVFQGRMLHV 478
>gi|315049793|ref|XP_003174271.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
gi|311342238|gb|EFR01441.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
Length = 280
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I GLP ++EG + FSQ+G V + +V +K + + G AF+ + + S DLAV+N+
Sbjct: 35 VYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILV 148
G GR + V
Sbjct: 95 GGATVLGRVLRV 106
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + + AFS +GEV++ KI+ ++ +++ G FV FS +E+ A+E MN
Sbjct: 11 FVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + + AFS +GEV++ KI+ ++ +++ G FV FS +E+ A+E MN
Sbjct: 11 FVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNEAQS 86
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + + AFS +GEV++ KI+ ++ +++ G FV FS +E+ A+E MN
Sbjct: 11 FVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + + AFS +GEV++ KI+ ++ +++ G FV FS +E+ A+E MN
Sbjct: 11 FVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNEAQS 86
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I++K L + E R++ FSQFG+++ VK++ + +S G FV F + E A AV
Sbjct: 191 TNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRD-VSGHSRGFGFVNFEKHEEAQKAVV 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
NMNG+ GR + V A+ + + + R++
Sbjct: 250 NMNGREVSGRLLYVGRAQKRVERQNELKRRFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +S+ + +++K FS +G + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +AE
Sbjct: 354 NGRIVGTKPLYVALAE 369
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F E+A A+ M
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFG--FVHFETHEAAQNAISTM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|158298753|ref|XP_318916.3| AGAP009810-PA [Anopheles gambiae str. PEST]
gi|157014037|gb|EAA14200.3| AGAP009810-PA [Anopheles gambiae str. PEST]
Length = 306
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
TS + +++ GL E +TE + AF FG++V +++ + S++ G AF+ F E A
Sbjct: 2 TSDKRTVYVGGLSEEVTEKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAA 61
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
AV+NMN GR I V A+
Sbjct: 62 AAVDNMNDSELCGRTIRVNTAK 83
>gi|268529184|ref|XP_002629718.1| C. briggsae CBR-EXC-7 protein [Caenorhabditis briggsae]
Length = 456
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S+T + I LP+ MT+ V+ F+ GE+ K+V +K++ Q LG FV + R+E A A
Sbjct: 43 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 102
Query: 133 VENMNGKFFYGRFILVKIA 151
V + NG + I V A
Sbjct: 103 VSSFNGLRLQNKTIKVSYA 121
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+D + +++ G+P+SMT ++ F FG+++ +I+++ ++ G FV F +K+
Sbjct: 125 NDQIKGSNLYVSGIPKSMTLHELEGIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDE 184
Query: 129 ADLAVENMNGKFFYG--RFILVKIAETGLSKN 158
AD A++ +NG G I VK A S N
Sbjct: 185 ADTAIKTLNGSIPTGCSEQITVKFANNPASNN 216
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 48 IYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIV 107
I +H L + S S ++ SDT+ +F+ L + + + FSQFG ++ VKI+
Sbjct: 349 IAAHAQL-SALSASVAATLPPSDTAGYC-LFVYNLAADTDDTLLWQLFSQFGAILNVKIL 406
Query: 108 TEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILV 148
+ +S++ G AFV S A A+ ++NG G+ + V
Sbjct: 407 RD-ISQKCKGYAFVSMSTYTEAYNAMVSLNGTNLAGKPLQV 446
>gi|115666403|ref|XP_802063.2| PREDICTED: ELAV-like protein 2-like isoform 7 [Strongylocentrotus
purpuratus]
Length = 367
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
D S+T + + LP++M + +K F +FGE+ K+V +KL+ Q LG FV + +
Sbjct: 32 GDEDSKTNLIVNYLPQNMAQDEMKSLFGKFGEIESCKLVRDKLTGQSLGYGFVNYLKPAD 91
Query: 129 ADLAVENMNG 138
A AV+ +NG
Sbjct: 92 ALKAVKTLNG 101
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKL---SKQPLGSAFVWFSRKESADLAV 133
++I G+P+ + + F+ FG ++ +++ + S +P G FV + R+ A+ A+
Sbjct: 126 LYISGIPKHYGQLDLDNLFNAFGRIICSRLLLDHECGESGRPRGVGFVRYDRRCEAEKAI 185
Query: 134 ENMNGKFFYG 143
E +NG +G
Sbjct: 186 EGLNGNIPHG 195
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ LP +G + + F +G V VK+V ++ +++ G FV + A A+ +
Sbjct: 286 IFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQRCKGYGFVNMLNYDEALSAINTL 345
Query: 137 NGKFFYGRFIL 147
NG G+ L
Sbjct: 346 NGYQLNGKRTL 356
>gi|449463793|ref|XP_004149616.1| PREDICTED: uncharacterized protein LOC101209889 [Cucumis sativus]
Length = 706
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ + + T+ + + F++FGEV++V IVT+ + QP GSA+V F RKESA+ A+ ++
Sbjct: 538 IFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENAL-SL 596
Query: 137 NGKFFYGRFILV 148
+G F R + V
Sbjct: 597 DGTSFMSRILKV 608
>gi|440639411|gb|ELR09330.1| hypothetical protein GMDG_03896 [Geomyces destructans 20631-21]
Length = 839
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
N E++ S+R +F++ LP ++T + K FS+ + +V + +KQ G FV
Sbjct: 29 NKKARKETNASARRSLFVRSLPATVTSDALTKLFSESYPLKHATVVLDPETKQSKGYGFV 88
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIAE 152
F+ E A+ A E +GK F GR + V++AE
Sbjct: 89 TFADAEDAERAKEEFHGKAFQGRKLKVEVAE 119
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T + + +F++ LP + + +K+ F QFG V ++V ++ + +P G+ FV F E AD
Sbjct: 361 TDNSSTLFVRNLPFTARDPELKEHFMQFGAVRYARVVMDRATDRPKGTGFVCFYNVEDAD 420
Query: 131 LAVEN 135
V+N
Sbjct: 421 NCVKN 425
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G+ S ST S S +F+ + + E ++K+ FSQ G VV +++V ++ + +P G
Sbjct: 8 GAASKTSTSSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYG 67
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIAETG 154
F ++ ++A+ A+ N+NG GR + V A G
Sbjct: 68 FCEYNDPQTAESAIRNLNGYELNGRQLRVDSAAGG 102
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N E D + +FI+ LP + TE +++ FS+FG + ++ + L+K+P G AFV F
Sbjct: 382 NEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFM 441
Query: 125 RKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 442 FPEHAVRAYAEVDGQVFQGRMLHV 465
>gi|298528142|ref|ZP_07015546.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511794|gb|EFI35696.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP S TE +++ +F++FGEV KI+ ++ + + G FV + AD A+E
Sbjct: 2 TNLYVGNLPWSTTEAQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFV--EMENGADEAIE 59
Query: 135 NMNGKFFYGRFILVKIA 151
+NGK + GR I V +A
Sbjct: 60 ALNGKDYGGRSIKVNVA 76
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 49/76 (64%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+ R+++AF FG+V+Q K+++++ + + G F+ F+ + + + A++ MN
Sbjct: 5 FVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAIKEMN 64
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 65 GKELDGRNITVNQAQS 80
>gi|46135807|ref|XP_389595.1| hypothetical protein FG09419.1 [Gibberella zeae PH-1]
Length = 306
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP ++EG V FSQFGE V +K+ +K + + G ++ + + S DLAV+N+
Sbjct: 22 IYFGGLPYELSEGDVITIFSQFGEPVWLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 81
Query: 137 NGKFFYGRFILVKIA 151
G GR + V A
Sbjct: 82 GGADMGGRLVSVDHA 96
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ L SMTE +K+ F+++GE+ V ++T+K + Q G AFV ++ A+ A++ +
Sbjct: 3 IYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFVEMVKQADAETAIKEL 62
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRY 165
NGK G + +K+ + + RR RY
Sbjct: 63 NGKTIKG--MSIKVNQARPRGEKPRRPRY 89
>gi|125590156|gb|EAZ30506.1| hypothetical protein OsJ_14553 [Oryza sativa Japonica Group]
Length = 684
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++I LP ++ + + FSQFGE+V K++ ++++ Q G FV +S A+ A+
Sbjct: 339 TNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIA 398
Query: 135 NMNGKFFYGRFILVKIA 151
MNG GR I V++A
Sbjct: 399 AMNGYHLEGRVIAVRVA 415
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T +++AFS+FG+V +++T+++S G FV ++ E A ++ M
Sbjct: 42 LFVSGLNKRTTSDGLREAFSKFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKGM 101
Query: 137 NGKFFYGRFILVKIAE 152
+GKFF G I + A+
Sbjct: 102 DGKFFDGWVIFAEYAK 117
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ L S TE V++ FSQ+G V +V + T++ + +P G AFV KE+ D A++
Sbjct: 3 TKMYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIK 62
Query: 135 NMNGKFFYGRFILVKIA 151
+NG + GR + V A
Sbjct: 63 GLNGLEWMGRALTVNEA 79
>gi|355715636|gb|AES05391.1| RNA binding motif protein 19 [Mustela putorius furo]
Length = 823
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N E D + +FI+ LP + TE +++ FS+FG + ++ + L+K+P G AFV F
Sbjct: 396 NEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFM 455
Query: 125 RKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 456 FPEHAVRAYAEVDGQVFQGRMLHV 479
>gi|238883239|gb|EEQ46877.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 266
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 39 NSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTG-IFIKGLPESMTEGRVKKAFSQ 97
N S SV++I ++ + +N+S + +S T S++G I+I LP E +K FSQ
Sbjct: 91 NKSGHSVNKIIK----TSEATATNTSANNKS-TKSKSGVIYIGRLPSGFQESELKTYFSQ 145
Query: 98 FGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAET 153
FG+V+ VK+ K + F+ F E A +A E MN +G I ++ E
Sbjct: 146 FGDVINVKLARNKKTGNTKHYGFIEFDSIEVAKVAAETMNNYLLFGHLIKCEVVEN 201
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP S + +K AFS FGEV + +++ ++ + + G FV + E+A A+ M
Sbjct: 38 LFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAM 97
Query: 137 NGKFFYGRFILVKIAE 152
+G+ GR + V AE
Sbjct: 98 DGQNLGGRTVRVSFAE 113
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 31 ISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGR 90
+S T NN+++ P+ CS S++TE S+T + + LP++MT+
Sbjct: 34 LSNGPTCNNTANC--------PNTINNCSSPVESSNTED---SKTNLIVNYLPQNMTQEE 82
Query: 91 VKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKI 150
+K F GE+ K+V +K++ Q LG FV + + A+ A+ +NG + I V
Sbjct: 83 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 142
Query: 151 A 151
A
Sbjct: 143 A 143
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 214
Query: 137 NGK 139
NG+
Sbjct: 215 NGQ 217
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + + AFS +GEV++ KI+ ++ +++ G FV FS +E+ A+E MN
Sbjct: 11 FVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNEAQS 86
>gi|148224170|ref|NP_001084080.1| ELAV-like protein 3 [Xenopus laevis]
gi|82245647|sp|Q91584.1|ELAV3_XENLA RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|608541|gb|AAA96944.1| ribonucleoprotein [Xenopus laevis]
Length = 348
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 58 CSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
C G + + E+D S+T + + LP++MT+ K F GE+ K+V +K++ Q LG
Sbjct: 18 CVGILNGTNGEAD-DSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLG 76
Query: 118 SAFVWFSRKESADLAVENMNG 138
FV + AD A+ +NG
Sbjct: 77 YGFVNYVDPNDADKAINTLNG 97
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 41/63 (65%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ LP++M + +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 122 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 181
Query: 137 NGK 139
NG+
Sbjct: 182 NGQ 184
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL S + +++AFS +GEVV+ KI++++ + + G FV F+ ++S A++ MN
Sbjct: 11 FVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDAMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKMLDGRSITVNPAQS 86
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
N E D + +F++ LP + TE ++K FS+FG + ++ + L K+P G AFV F
Sbjct: 391 DNEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKFGPLSEIHYPIDSLIKKPKGFAFVTF 450
Query: 124 SRKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 451 MFPEHAVKAYTEVDGQVFQGRMLHV 475
>gi|390360288|ref|XP_003729672.1| PREDICTED: ELAV-like protein 2-like [Strongylocentrotus purpuratus]
Length = 385
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
D S+T + + LP++M + +K F +FGE+ K+V +KL+ Q LG FV + +
Sbjct: 32 GDEDSKTNLIVNYLPQNMAQDEMKSLFGKFGEIESCKLVRDKLTGQSLGYGFVNYLKPAD 91
Query: 129 ADLAVENMNG 138
A AV+ +NG
Sbjct: 92 ALKAVKTLNG 101
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I G+P+ + + F+ FG ++ +++ + +P G FV + R+ A+ A+E +
Sbjct: 126 LYISGIPKHYGQLDLDNLFNAFGRIICSRLLLDHECGRPRGVGFVRYDRRCEAEKAIEGL 185
Query: 137 NGKFFYG 143
NG +G
Sbjct: 186 NGNIPHG 192
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 26 IPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPES 85
+P+ F+ +TS S + SH +LQ ++ IF+ LP
Sbjct: 272 LPKNFMFNPMTS--------SDVISHMNLQAM-----------TNNGQGWCIFVYNLPAD 312
Query: 86 MTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRF 145
+G + + F +G V VK+V ++ +++ G FV + A A+ +NG G+
Sbjct: 313 CEDGLLWQLFGPYGAVTNVKVVRDQPNQRCKGYGFVNMLNYDEALSAINTLNGYQLNGKR 372
Query: 146 IL 147
L
Sbjct: 373 TL 374
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 31 ISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGR 90
+S T NN+++ P+ CS S++TE S+T + + LP++MT+
Sbjct: 34 LSNGPTCNNTANC--------PNTINNCSSPVESSNTED---SKTNLIVNYLPQNMTQEE 82
Query: 91 VKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKI 150
+K F GE+ K+V +K++ Q LG FV + + A+ A+ +NG + I V
Sbjct: 83 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 142
Query: 151 A 151
A
Sbjct: 143 A 143
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 214
Query: 137 NGK 139
NG+
Sbjct: 215 NGQ 217
>gi|346469013|gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +F+ GL + T +++AF++FGEVV ++VT+++S G FV ++ E A ++
Sbjct: 36 TNLFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIK 95
Query: 135 NMNGKFFYGRFILVK 149
M+GKF G I +
Sbjct: 96 GMDGKFLDGWVIFAE 110
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N E D + +FI+ LP + TE +++ FS+FG + ++ + L+K+P G AFV F
Sbjct: 394 NEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFM 453
Query: 125 RKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 454 FPEHAVRAYAEVDGQVFQGRMLHV 477
>gi|154341070|ref|XP_001566488.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063811|emb|CAM40000.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 619
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S+T +F++ L ++TE +++ F Q+G ++ ++ + + + LG+AFV +S E A A
Sbjct: 65 SQTNLFVRKLASAVTEDDMRRLFGQYGTIISFALMRDIYTGESLGTAFVRYSTHEEARSA 124
Query: 133 VENMNGKFFYGRFILVKIAE 152
+ ++G YGR I ++ A+
Sbjct: 125 MAALDGHELYGRPISIQWAK 144
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ ++ AF ++G +V+ K+V +K S + G F+ F K++ D A+ M
Sbjct: 9 CFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGMDLDGRTITVDKAQ 84
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP S + +K AFS FGEV + +++ ++ + + G FV + E+A A+ M
Sbjct: 38 LFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAM 97
Query: 137 NGKFFYGRFILVKIAE 152
+G+ GR + V AE
Sbjct: 98 DGQNLGGRTVRVSFAE 113
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + E +K AFS+FG V++ +I+ ++ S + G F+ F+ E A A+ +M
Sbjct: 34 LFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTSM 93
Query: 137 NGKFFYGRFILVKIA 151
+GK GR I V A
Sbjct: 94 DGKELQGRNIRVNHA 108
>gi|344246646|gb|EGW02750.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 127
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I+IK E M + R+K F +FG + VK++T++ K G FV F + E A AV+
Sbjct: 27 TNIYIKNFGEDMDDERLKDLFGKFGPALNVKVMTDESGKSK-GFGFVSFEKHEDAQKAVD 85
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 86 EMNGKELNGKQIYVGRAQKKMEQ 108
>gi|297840491|ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
gi|297333968|gb|EFH64386.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
E+D + + IF+ GL +TE +++ F ++G++ + +I+ K + +P G F+ F+
Sbjct: 3 DRENDRNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGKDTGRPRGFGFITFTD 62
Query: 126 KESADLAVENMNGKFFYGRFILVKIAE 152
+ AD A+++M+G+ R I V AE
Sbjct: 63 RRGADEAIKHMHGRELGDRVISVNKAE 89
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T ++IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 242 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 300
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 301 AKKAVEEMNGRDINGQLIFVGRAQ 324
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 152 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 209
Query: 131 LAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
A+E MNGK G + V G KNR R
Sbjct: 210 RAIEEMNGKLLKGCKVFV-----GRFKNRKDR 236
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 353 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEM 410
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 411 NGRILGSKPLSIALAQ 426
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 130 NFDIIKGKSI 139
>gi|213623456|gb|AAI69769.1| ElrC protein [Xenopus laevis]
Length = 341
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 58 CSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
C G + + E+D S+T + + LP++MT+ K F GE+ K+V +K++ Q LG
Sbjct: 18 CVGILNGTNGEAD-DSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLG 76
Query: 118 SAFVWFSRKESADLAVENMNG 138
FV + AD A+ +NG
Sbjct: 77 YGFVNYVDPNDADKAINTLNG 97
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 41/63 (65%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ LP++M + +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 122 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 181
Query: 137 NGK 139
NG+
Sbjct: 182 NGQ 184
>gi|302829787|ref|XP_002946460.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
gi|300268206|gb|EFJ52387.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
Length = 186
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+ +T +++ GL E++ E + AF FGE+ +V I + + G FV + KE A
Sbjct: 14 TNPKTTLYVGGLEETVNEATLHAAFLPFGEIKEVNIPLDHATGTHRGFGFVEYEEKEDAA 73
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
A++NM+ +GR + V A+
Sbjct: 74 AAIDNMHNAELFGRVLKVNYAQ 95
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 224
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 225 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 256
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 76 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 133
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 134 NGMLLNDRKVFVGRF 148
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 271 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 328
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 329 NGRIVATKPLYVALAQ 344
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 206 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 264
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 265 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 296
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 116 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 173
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 174 NGMLLNDRKVFVGRF 188
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 311 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 368
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 369 NGRIVATKPLYVALAQ 384
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD+S IF+ G+P + E +++ F +FG V +V ++ + ++P G F+ F ++S
Sbjct: 106 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 165
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
D AV NM+ G+ + VK AE SKN+
Sbjct: 166 VDQAV-NMHFHDIMGKKVEVKRAEPRDSKNQ 195
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
NS +D + +F+ GL S T+ ++ FSQ+GEVV I+ +K + Q G FV F
Sbjct: 2 NSAGADEIGK--LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>gi|343469550|emb|CCD17501.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 601
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI+GLP +++ FG+V K+V + + G FV F R+ESA L VE +
Sbjct: 380 VFIQGLPLQWNTDKLRSLCGAFGKVELAKVVRDAATSLSCGHGFVLFEREESAALCVERL 439
Query: 137 NGKFFYGRFILVKIA 151
NG GR + ++A
Sbjct: 440 NGVTIEGRTLACRLA 454
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +FI GL T+ ++ FS+FG++V+ ++VT+++S + G FV ++ E A E
Sbjct: 44 TKLFISGLSRQTTDEGLRAKFSEFGQLVEARVVTDRISGRSRGFGFVRYATLEDAAKGKE 103
Query: 135 NMNGKFFYGRFILVKIAE 152
M+GKF G I A+
Sbjct: 104 GMDGKFLDGWVIFADFAK 121
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD+S IF+ G+P + E +++ F +FG V +V ++ + ++P G F+ F ++S
Sbjct: 98 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 157
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
D AV NM+ G+ + VK AE SKN+
Sbjct: 158 VDQAV-NMHFHDIMGKKVEVKRAEPRDSKNQ 187
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
+F+ GL S T+ ++ FSQ+GEVV I+ +K + Q G FV F
Sbjct: 4 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 50
>gi|68471131|ref|XP_720342.1| hypothetical protein CaO19.7050 [Candida albicans SC5314]
gi|77022514|ref|XP_888701.1| hypothetical protein CaO19_7050 [Candida albicans SC5314]
gi|46442206|gb|EAL01497.1| hypothetical protein CaO19.7050 [Candida albicans SC5314]
gi|76573514|dbj|BAE44598.1| hypothetical protein [Candida albicans]
Length = 267
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 39 NSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTG-IFIKGLPESMTEGRVKKAFSQ 97
N S SV++I ++T + + ++++ T S++G I+I LP E +K FSQ
Sbjct: 92 NKSGHSVNKI-----IKTSEATTTNTSANNKSTKSKSGVIYIGRLPSGFQESELKTYFSQ 146
Query: 98 FGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
FG+V+ VK+ K + F+ F E A +A E MN +G I ++ E
Sbjct: 147 FGDVINVKLARNKKTGNTKHYGFIEFDSIEVAKVAAETMNNYLLFGHLIKCEVVE 201
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 63 SSNSTESDTSSR----TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
S E++ +R T ++IK E M + R+K+ F +FG + VK++T++ K G
Sbjct: 175 SQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GF 233
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
FV F R E A AV+ MNGK G+ I V A+ + + + +++
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD+S IF+ G+P + E +++ F +FG V +V ++ + ++P G F+ F ++S
Sbjct: 106 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 165
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
D AV NM+ G+ + VK AE SKN+
Sbjct: 166 VDQAV-NMHFHDIMGKKVEVKRAEPRDSKNQ 195
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
NS +D + +F+ GL S T+ ++ FSQ+GEVV I+ +K + Q G FV F
Sbjct: 2 NSAGADEIGK--LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + E +K AFS+FG V++ +I+ ++ S + G F+ F+ E A A+ +M
Sbjct: 34 LFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTSM 93
Query: 137 NGKFFYGRFILVKIA 151
+GK GR I V A
Sbjct: 94 DGKELQGRNIRVNHA 108
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ +K+AF +FG +V+ K+V +K S + G FV F K++ + A++ M
Sbjct: 9 CFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKEM 68
Query: 137 NGKFFYGRFILVKIAE 152
+G GR I V A+
Sbjct: 69 HGMDLDGRSITVDKAQ 84
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD+S IF+ G+P + E +++ F +FG V +V ++ + ++P G F+ F ++S
Sbjct: 106 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 165
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
D AV NM+ G+ + VK AE SKN+
Sbjct: 166 VDQAV-NMHFHDIMGKKVEVKRAEPRDSKNQ 195
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
NS +D + +F+ GL S T+ ++ FSQ+GEVV I+ +K + Q G FV F
Sbjct: 2 NSAGADEIGK--LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>gi|395856757|ref|XP_003800785.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Otolemur garnettii]
Length = 359
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + ++K+ FS++G + VK++T+ K G FV F E+A AV+
Sbjct: 161 TNVYIKNFGEDMDDEKLKEVFSKYGRTLSVKVMTDSSGKSK-GFGFVSFDNHEAAKKAVK 219
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 220 EMNGKDINGQLIFVGRAQ 237
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + +VK++ E Q G + FS E A A+ M
Sbjct: 266 LYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQE--GGQSKGFGLICFSSLEEATKAMTEM 323
Query: 137 NG 138
NG
Sbjct: 324 NG 325
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + K FS G V+ ++I + ++++ LG A+V F + A A++ M
Sbjct: 12 LYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 137 N 137
N
Sbjct: 72 N 72
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T +++AF++FGEV+ ++VT++++ G FV ++ E A +E M
Sbjct: 50 LFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEGM 109
Query: 137 NGKFFYGRFILVKIA 151
+GKF G I + A
Sbjct: 110 DGKFLDGWVIFAEYA 124
>gi|344243397|gb|EGV99500.1| DAZ-associated protein 1 [Cricetulus griseus]
Length = 365
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD+S IF+ G+P + E +++ F +FG V +V ++ + ++P G F+ F ++S
Sbjct: 66 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 125
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
D AV NM+ G+ + VK AE SKN+
Sbjct: 126 VDQAV-NMHFHDIMGKKVEVKRAEPRDSKNQ 155
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEK---LSKQP----LGSAFV 121
SD +SRT + + LP++MTE ++ FS GEV VK+V +K QP LG FV
Sbjct: 68 SDNNSRTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFV 127
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIA 151
+ R + A+ AV +NG + + V A
Sbjct: 128 NYHRPQDAEQAVNVLNGLRLQNKVLKVSFA 157
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 41/62 (66%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I GLP+++T+ ++ F +GE++ +++ + + +P G F+ F +++ A+ A++ +
Sbjct: 169 LYISGLPKTITQEELETIFRPYGEIITSRVLIQDGNDKPKGVGFIRFDQRKEAERAIQAL 228
Query: 137 NG 138
NG
Sbjct: 229 NG 230
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L E + + F FG V VK++ + + Q G FV + E A LA+ ++
Sbjct: 317 IFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDAATNQCKGYGFVTMTNYEEAMLAIRSL 376
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 377 NGYTLGQRVLQV 388
>gi|242280537|ref|YP_002992666.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242123431|gb|ACS81127.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 87
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP S TE V+ AF FGEVV VK++ ++ + +P G FV + + A++N+
Sbjct: 5 IYVGNLPWSATEDEVRAAFEAFGEVVSVKLIEDRETGRPRGFGFVEMEDAGAME-AIDNL 63
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRY 165
+GK F GR + V A K R R R+
Sbjct: 64 DGKDFGGRNLKVNEA-----KPRAPRPRW 87
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
+S+ R + I LP S+TE +++ F FG + +KI+T++ + + LG FV F
Sbjct: 74 DSSADTPEPRNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFE 133
Query: 125 RKESADLAVENMNGKFFYGRFILVKIAETGLSKNRG 160
E A A++ MNG+ + + + V IA S G
Sbjct: 134 TAEEAARAIQAMNGRQYMNKRLKVSIARPSSSSITG 169
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 71 TSSRTG--IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+SS TG ++IK LP ++TE +++ F+ FGE++ +++ + P G AFV F ++
Sbjct: 164 SSSITGANLYIKNLPRTITEDQLRAIFNPFGEIISARLLYD--GDVPKGIAFVRFDKRAC 221
Query: 129 ADLAVENMN 137
A+ AV +N
Sbjct: 222 AERAVAELN 230
>gi|168001864|ref|XP_001753634.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695041|gb|EDQ81386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+ +T +++ GL E++TE V AF FG+V + + ++ +++ G AF+ + KE A
Sbjct: 3 TNPKTTLYVGGLEENVTEQVVHAAFIPFGDVKDISMPLDQATQKHRGFAFITYFEKEDAA 62
Query: 131 LAVENMNGKFFYGRFILVKIAE 152
A++NM+ YGR + V A+
Sbjct: 63 AAMDNMHNGELYGRVLTVNYAQ 84
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD+S IF+ G+P + E +++ F +FG V +V ++ + ++P G F+ F ++S
Sbjct: 107 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
D AV NM+ G+ + VK AE SKN+
Sbjct: 167 VDQAV-NMHFHDIMGKKVEVKRAEPRDSKNQ 196
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
NS +D + +F+ GL S T+ ++ FSQ+GEVV I+ +K + Q G FV F
Sbjct: 2 NSAGADEIGK--LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL E +K+ FSQ+GEV++ +++ ++ + + G F+ F E A A++ M
Sbjct: 42 LFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAM 101
Query: 137 NGKFFYGRFILVKIA 151
+G+ +GR I V A
Sbjct: 102 DGQDLHGRRIKVNYA 116
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
SD+S IF+ G+P + E +++ F +FG V +V ++ + ++P G F+ F ++S
Sbjct: 196 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 255
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
D AV NM+ G+ + VK AE SKN+
Sbjct: 256 VDQAV-NMHFHDIMGKKVEVKRAEPRDSKNQ 285
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 74 RTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
R +F+ GL S T+ ++ FSQ+GEVV I+ +K + Q G FV F
Sbjct: 98 RRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 147
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + +++ FSQFGEV+ KI+ ++ + + G FV F ++S A+E MN
Sbjct: 10 FVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEEMN 69
Query: 138 GKFFYGRFILVKIAE 152
GK GR I V A+
Sbjct: 70 GKELDGRSITVNEAQ 84
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 77 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 133
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 134 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 172
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 184 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 243
Query: 137 NGK 139
NG+
Sbjct: 244 NGQ 246
>gi|15639347|ref|NP_218796.1| RNA-binding protein, [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025589|ref|YP_001933361.1| RNA-binding protein [Treponema pallidum subsp. pallidum SS14]
gi|408502236|ref|YP_006869680.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|3322634|gb|AAC65342.1| RNA-binding protein, putative [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018164|gb|ACD70782.1| possible RNA-binding protein [Treponema pallidum subsp. pallidum
SS14]
gi|408475599|gb|AFU66364.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 105
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ L + TE + FSQFGEV+ V ++ +KL+++ G FV ESA+L + +
Sbjct: 21 IYVGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELVINEL 80
Query: 137 NGKFFYGRFILVKIAE 152
N K F GR + V AE
Sbjct: 81 NEKEFEGRRLRVNYAE 96
>gi|212275376|ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea mays]
gi|194689494|gb|ACF78831.1| unknown [Zea mays]
gi|219887513|gb|ACL54131.1| unknown [Zea mays]
gi|238010456|gb|ACR36263.1| unknown [Zea mays]
gi|413921450|gb|AFW61382.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921451|gb|AFW61383.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921452|gb|AFW61384.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921453|gb|AFW61385.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 467
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP +TE +++ GE+ +V++ +K +K+ G AFV F KE+A A+E++
Sbjct: 107 VFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQRAIEDV 166
Query: 137 NGKFFYGRFILVKIAET 153
+ F GR + +++
Sbjct: 167 QDREFKGRTLRCSLSQA 183
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS-KQPLGSAFVWFSRKESADLAVEN 135
I++K LPE++++ ++K F + GEV ++ + K K+ G FV F+ + SA AV+
Sbjct: 283 IYVKNLPENVSKEKIKDLFDKHGEVTKIVLPPAKAGHKRDFG--FVHFAERSSALKAVKG 340
Query: 136 MNGKFFYGRFILVKIA 151
G+ + V +A
Sbjct: 341 SEKYEIDGQVLEVSMA 356
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 54 LQTKCSGSNSSNSTESD-TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
L +G + N + SD S+ + IF+ GL +TE + + FS FGEVV VKI K
Sbjct: 328 LALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGK-- 385
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
G FV F+ ++SA+ A+ N+NG
Sbjct: 386 ----GCGFVQFANRQSAEEAIGNLNG 407
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK + M + R+K+ F ++G+ + VK++T+ K G FV F + E A+ AVE
Sbjct: 191 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSK-GFGFVSFEKHEEANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ + V A+ + + R++
Sbjct: 250 EMNGKDINGKMLFVGRAQKKAERQAELKRRFE 281
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +++AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 44/83 (53%)
Query: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
+T + + +++ L +TE + + FS G V+ +++ + ++++ LG A+V F +
Sbjct: 2 NTAASSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 126 KESADLAVENMNGKFFYGRFILV 148
A+ A++ MN G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|449501608|ref|XP_004161415.1| PREDICTED: uncharacterized protein LOC101228197 [Cucumis sativus]
Length = 709
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ + + T+ + + F++FGEV++V IVT+ + QP GSA+V F RKESA+ A+ ++
Sbjct: 538 IFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENAL-SL 596
Query: 137 NGKFFYGRFILVKIA 151
+G F R IL IA
Sbjct: 597 DGTSFMSR-ILKSIA 610
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
+RT +++ LP ++E +++ F Q+G+V ++ ++ +K++ Q G AFV ++A A
Sbjct: 45 NRTRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQSA 104
Query: 133 VENMNGKFFYGRFILVKIAE 152
+ N+NG GR I+V A+
Sbjct: 105 INNLNGSSVSGRQIVVNEAK 124
>gi|410084527|ref|XP_003959840.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
gi|372466433|emb|CCF60705.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
Length = 285
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 49 YSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVT 108
Y H LQ K N NS +D IFI LP ++TE ++K F +FGE+ +++IV
Sbjct: 83 YLHNELQ-KWDPMNDVNSQNTDPYK--TIFIGRLPYNVTEIELQKIFIKFGEIEKIRIVK 139
Query: 109 EKLSKQPLGSAFVWFSRKESADLAVENM---NGKFFYGRFILVKIAETGLSKNRGRRTRY 165
+ + +P G F+ F+ +A +AV + G GR +V I RGR +Y
Sbjct: 140 DIKTDKPKGYGFILFNEANAAKMAVREIGTHRGIEINGRSCIVDIE-------RGRSVKY 192
>gi|254585211|ref|XP_002498173.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
gi|238941067|emb|CAR29240.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
Length = 167
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL + +TE V FSQ+G V +K+V ++ + + G A++ + + S LAV+N+
Sbjct: 36 IFIGGLHKELTEADVLTVFSQYGVPVDLKLVRDRENGESRGFAYLKYEDQRSTVLAVDNL 95
Query: 137 NGKFFYGRFILVKIA 151
NG GR I V A
Sbjct: 96 NGAIVAGRRIRVDHA 110
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I++K L ++ E R++ FSQFG + VK++ + + Q G FV F + E A AV+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAE 152
+MNGK G+ + V A+
Sbjct: 250 HMNGKEVSGQLLYVGRAQ 267
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +S+ + R+K+ FS +G + K++TE S G FV FS E A AV M
Sbjct: 296 LYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGTKPLYVALAQ 369
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L S+ + FS FG ++ K+V + + G FV F E+A A+ M
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFG--FVHFETHEAAQKAINTM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|341892274|gb|EGT48209.1| hypothetical protein CAEBREN_24057 [Caenorhabditis brenneri]
Length = 302
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GL +++EG V FSQ+GEV+ V ++ +K + + G AF+ + + S LAV+N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNVNLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNF 99
Query: 137 NGKFFYGRFILVKIAE 152
NG + R I V E
Sbjct: 100 NGITLHKRMIRVDHVE 115
>gi|317154439|ref|YP_004122487.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944690|gb|ADU63741.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP S TE ++ AF +GEV VK++ ++ + +P G FV + + A+EN+
Sbjct: 5 IYVGNLPWSATEDEIRAAFGAYGEVTSVKLIEDRETGRPRGFGFVEMDDAGALE-AIENL 63
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRY 165
+GK F GR I V A K R R R+
Sbjct: 64 DGKDFGGRNIKVNEA-----KPRAERPRW 87
>gi|294929985|ref|XP_002779453.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239888561|gb|EER11248.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 504
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 46 SRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVK 105
S YS P + G S ++ SD + +FI G+P + +GR+ + FSQ+G +V
Sbjct: 171 SSKYSAPPV-----GDGISFASPSDGYNPCKLFIGGIPSDLDQGRLDQFFSQYGNIVDSV 225
Query: 106 IVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFIL 147
++ ++++ +P G A+V +S E A A+ + G+++L
Sbjct: 226 VMKDRITGKPRGFAYVTYSTPEEAQTAINAGDANILDGKWLL 267
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 52 PSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKL 111
PS S N S++ D S+ +FI G+P S+ GR+++ SQ+G ++ I+T+++
Sbjct: 306 PSSTFVASSPNGSSAVGGDNPSK--VFIGGVPASVDNGRLQEVMSQYGRIIDCIIMTDRV 363
Query: 112 SKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
+ +P G A+ +S E A A + G++ VK A
Sbjct: 364 TARPRGFAYCTYSTPEEAQAACNGGSNNSIDGQWFDVKPA 403
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 59 SGSNSSN------STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
+G N+SN S + S+ T IF+ GL +T+ ++++FSQFGEVV VKI K
Sbjct: 291 AGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGK-- 348
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
G FV F+ + SA+ A++ +NG
Sbjct: 349 ----GCGFVQFANRNSAEDALQRLNG 370
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T +++AFS+FG+V++ +++T+++S G FV ++ E A ++ M
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 137 NGKFFYGRFILVKIAE 152
+GKF G I + A+
Sbjct: 97 DGKFLDGWVIFAEYAK 112
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 31 ISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGR 90
+S T NN+++ + + CS S +TE S+T + + LP++MT+
Sbjct: 279 LSNGPTCNNTANGPTT-------INNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEE 328
Query: 91 VKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKI 150
+K F GE+ K+V +K++ Q LG FV + + A+ A+ +NG + I V
Sbjct: 329 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 388
Query: 151 A 151
A
Sbjct: 389 A 389
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 401 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 460
Query: 137 NGK 139
NG+
Sbjct: 461 NGQ 463
>gi|338706322|ref|YP_004673090.1| putative RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|378972859|ref|YP_005221463.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378973926|ref|YP_005222532.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378974988|ref|YP_005223596.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
gi|378981835|ref|YP_005230140.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384421880|ref|YP_005631239.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059746|gb|ADD72481.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|335344383|gb|AEH40299.1| probable RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|374677182|gb|AEZ57475.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|374678252|gb|AEZ58544.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|374679321|gb|AEZ59612.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|374680386|gb|AEZ60676.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
Length = 89
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ L + TE + FSQFGEV+ V ++ +KL+++ G FV ESA+L + +
Sbjct: 5 IYVGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELVINEL 64
Query: 137 NGKFFYGRFILVKIAE 152
N K F GR + V AE
Sbjct: 65 NEKEFEGRRLRVNYAE 80
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 59 SGSNSSN------STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
+G N+SN S + S+ T IF+ GL +T+ ++++FSQFGEVV VKI K
Sbjct: 273 AGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGK-- 330
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
G FV F+ + SA+ A++ +NG
Sbjct: 331 ----GCGFVQFANRNSAEDALQRLNG 352
>gi|194879282|ref|XP_001974209.1| GG21207 [Drosophila erecta]
gi|190657396|gb|EDV54609.1| GG21207 [Drosophila erecta]
Length = 154
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ G P ++TEG + FSQ+GEVV + ++ + + + G F+ + + S LAV+N+
Sbjct: 36 IFVAGFPYTLTEGDIVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
Query: 137 NG 138
NG
Sbjct: 96 NG 97
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+ + +AFSQ+GEV++ KI+ ++ + + G FV F ++S A+E MN
Sbjct: 11 FVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMKDAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
G+ GR + V A++
Sbjct: 71 GQTLDGRNVTVNEAQS 86
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|413921449|gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 465
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP +TE +++ GE+ +V++ +K +K+ G AFV F KE+A A+E++
Sbjct: 107 VFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQRAIEDV 166
Query: 137 NGKFFYGRFILVKIAET 153
+ F GR + +++
Sbjct: 167 QDREFKGRTLRCSLSQA 183
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS-KQPLGSAFVWFSRKESADLAVEN 135
I++K LPE++++ ++K F + GEV ++ + K K+ G FV F+ + SA AV+
Sbjct: 281 IYVKNLPENVSKEKIKDLFDKHGEVTKIVLPPAKAGHKRDFG--FVHFAERSSALKAVKG 338
Query: 136 MNGKFFYGRFILVKIA 151
G+ + V +A
Sbjct: 339 SEKYEIDGQVLEVSMA 354
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL TE + +AFS+ G+VV+ +IV +++S + G FV F+ + A A+
Sbjct: 36 LFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKALMEF 95
Query: 137 NGKFFYGRFILVKIAETGLSKNRGR 161
NG+ F GR I V A+ S GR
Sbjct: 96 NGQQFNGRVIFVDYAKAKQSFGGGR 120
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
FI GL S ++ +K+ F +FG +++ K+V +K S + G FV F K++ + A+E M
Sbjct: 9 CFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEGM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 69 NGMDLDGRTITVDKAQ 84
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N E D + +F++ LP + TE +++ FS+FG + ++ + L+K+P G AFV F
Sbjct: 394 NEEEEDLADSGRLFVRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFM 453
Query: 125 RKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 454 FPEHAVKAYAEVDGQVFQGRMLHV 477
>gi|395329951|gb|EJF62336.1| hypothetical protein DICSQDRAFT_104771 [Dichomitus squalens
LYAD-421 SS1]
Length = 311
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 64 SNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
S S D IF+ GL +TEG V FSQ+GE++ + + +K + + G AF+ +
Sbjct: 20 SGSWHDDYKDSAYIFVGGLHRDLTEGDVITIFSQYGEIMDINLPRDKETGKQKGFAFLMY 79
Query: 124 SRKESADLAVENMNGKFFYGRFILV 148
+ S LAV+N+NG R + V
Sbjct: 80 EDQRSTILAVDNLNGAQVLDRTLRV 104
>gi|361067299|gb|AEW07961.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126579|gb|AFG43909.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126581|gb|AFG43910.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126583|gb|AFG43911.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126585|gb|AFG43912.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126587|gb|AFG43913.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126589|gb|AFG43914.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126591|gb|AFG43915.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 88 EGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFIL 147
E + +AFS+FGEVV+VKIV +++S++ G FV ++ + A+ A MNGK GR I
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 148 V 148
V
Sbjct: 61 V 61
>gi|194336480|ref|YP_002018274.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308957|gb|ACF43657.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 95
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I L +++E ++ AFS+FGEV I+ +K S + G FV + A A+E+M
Sbjct: 3 IYIGNLAYTVSEDDLRDAFSEFGEVANASIINDKFSGRSKGFGFVEMPKDSEAREAIESM 62
Query: 137 NGKFFYGRFILVKIA 151
NGK GR + V A
Sbjct: 63 NGKDLNGRTVTVNEA 77
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
GS ESD S R +++ LP + + R+++ FS+ G+V+ ++V ++ S + G
Sbjct: 109 GSRPERPRESDPSLR--VYVGNLPWQVDDSRLEQLFSEHGKVIDARVVYDRQSGRSRGFG 166
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILVKIAE 152
FV + +E D A+ ++G+ GR + V +AE
Sbjct: 167 FVTLATREEVDDAIAALDGQSLEGRALRVNVAE 199
>gi|452851689|ref|YP_007493373.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
gi|451895343|emb|CCH48222.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
Length = 87
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP S TE V+ AF+ +GEV VK++ ++ + +P G FV S D A+E +
Sbjct: 5 IYVGNLPWSATEDEVRAAFAAYGEVTSVKLIEDRETGRPRGFGFVEMSEDGYLD-AIEAL 63
Query: 137 NGKFFYGRFILVKIAETGLSKNR 159
+GK F GR I V A+ + + R
Sbjct: 64 DGKDFGGRNIKVNEAKPRVERPR 86
>gi|291391560|ref|XP_002712211.1| PREDICTED: zinc finger CCHC-type and RNA binding motif 1-like
[Oryctolagus cuniculus]
Length = 217
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ LP S+T + + FS++G+VV+V + +K +++ G AF+ F K+SA
Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTTMKDKDTRKSKGVAFILFLDKDSAQNC 67
Query: 133 VENMNGKFFYGRFILVKIA-ETGLSKNRGRRTRY 165
+N K +GR I IA + G + RR Y
Sbjct: 68 TRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNY 101
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N E D + +F++ LP + TE ++K FS++G + ++ + L+K+P G AF+ F
Sbjct: 392 NEEEEDLADSGRLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFM 451
Query: 125 RKESADLAVENMNGKFFYGRFILV 148
E A A ++G+ F GR + V
Sbjct: 452 FPEHAVKAYAEVDGQVFQGRMLHV 475
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL + T +++AFS+FG+V++ +++T+++S G FV ++ E A ++ M
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 137 NGKFFYGRFILVKIAE 152
+GKF G I + A+
Sbjct: 97 DGKFLDGWVIFAEYAK 112
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|402697283|gb|AFQ90829.1| polyA-binding protein cytoplasmic 1, partial [Dibamus sp. JJF-2012]
Length = 177
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+ M
Sbjct: 90 VYIKNFGEXMDDXRLKELFGKFGPALXVKVMTDESGKSK-GFGFVSFERHEDAQKAVDXM 148
Query: 137 NGKFFYGRFILV 148
NGK G+ I V
Sbjct: 149 NGKELNGKQIYV 160
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|361067297|gb|AEW07960.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 88 EGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFIL 147
E + +AFS+FGEVV+VKIV +++S++ G FV ++ + A+ A MNGK GR I
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 148 V 148
V
Sbjct: 61 V 61
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A++ M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIKKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+D R F+ GL + ++KAFSQ+GE+V KI+ ++ + + G FV F+ ++S
Sbjct: 2 ADVEDRC--FVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKS 59
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
+ +E MNG+ GR I V A+
Sbjct: 60 MNDVIEAMNGQDLDGRNITVNQAQ 83
>gi|62955147|ref|NP_001017589.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Danio rerio]
gi|62202409|gb|AAH92992.1| Zinc finger CCHC-type and RNA binding motif 1 [Danio rerio]
Length = 145
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ +P S+T + K S++G+VV+V IV +K ++ G AFV F +ESA
Sbjct: 8 SKSTVYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDRESAYNC 67
Query: 133 VENMNGKFFYGRFILVKIA 151
++N K +GR + IA
Sbjct: 68 SRSLNNKQLFGRMVKASIA 86
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 49 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 105
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 106 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 144
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 156 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 215
Query: 137 NGK 139
NG+
Sbjct: 216 NGQ 218
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++K + M + R+K+ FS++G+ + VK++T+ K G FV F E+A AVE
Sbjct: 289 TNVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSGGKSK-GFGFVSFDSHEAAKKAVE 347
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ + V A+
Sbjct: 348 EMNGKDVNGQLLFVGRAQ 365
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD A+E M
Sbjct: 199 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSR--GYAFVHFQNQNAADRAIEEM 256
Query: 137 NG------KFFYGRF 145
NG + F GRF
Sbjct: 257 NGALLKDCRLFVGRF 271
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + ++ + FS FG + +VKI+ E+ + G + FS E A A+ M
Sbjct: 394 LYIKNLDDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFG--LICFSSPEEATKAMAEM 451
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 452 NGRILGSKPLYIALAQ 467
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + K FS G V+ ++I + ++++ LG A+V F + A A++ M
Sbjct: 111 LYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDTM 170
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 171 NFDMIKGKPI 180
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 65 NSTESDTSSRTG-IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWF 123
N+ + + S TG IF++ LP + TE V + F QFG++ V I+ ++ +K+ G A+V F
Sbjct: 351 NAADMEALSETGRIFVRNLPYTATEEEVAELFEQFGKLSAVHILVDRSTKRSKGLAYVTF 410
Query: 124 SRKESADLAVENMNGKFFYGRFI 146
+ E A+E ++G F GR I
Sbjct: 411 AIPEDGVKAMEAVDGSIFQGRLI 433
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S T + I+ + T+ ++K F+ FG++ QV++ +K G AFV F+ A
Sbjct: 798 SATKLVIRNVAFEATKRDIQKLFNPFGQLKQVRL-PKKFDGAHRGFAFVEFNTARETQAA 856
Query: 133 VENMNGKFFYGRFILVK 149
++ + G YGR ++++
Sbjct: 857 MDALKGTHLYGRHVVLE 873
>gi|431899704|gb|ELK07658.1| Polyadenylate-binding protein 4-like protein [Pteropus alecto]
Length = 370
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 32 SKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRV 91
+A+ + N + + R++ P K + ++ + T ++IK + M + R+
Sbjct: 151 DRAIEAMNGALLKGCRLFVGPFKNRK----DRQAELQNKANEFTNVYIKNFGDDMDDERL 206
Query: 92 KKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
K+ FS FG+++ VK++T+ + G FV F E+A AVE MNGK G+ + V A
Sbjct: 207 KEIFSHFGKILSVKVMTDSRGRSK-GFGFVSFDSHEAAQRAVEIMNGKDLSGQPLFVGRA 265
Query: 152 E 152
+
Sbjct: 266 Q 266
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD A+E M
Sbjct: 100 VFIKNLHKSIDNKTLYEHFSAFGKILSSKVMSDDAGSR--GYAFVHFQSQTAADRAIEAM 157
Query: 137 NGKFFYG 143
NG G
Sbjct: 158 NGALLKG 164
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +S+ + R+++ FS FG + +VK++ E+ + G + FS E A A+ M
Sbjct: 295 LYIKNLDDSIDDERLRREFSSFGSISRVKVMKEEGRSKGFG--LICFSSPEEATKAMVEM 352
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 353 NGRILGSKSLNIALAQ 368
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + K FS G V+ ++I + ++++ LG A+V F A A++ M
Sbjct: 12 LYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKALDTM 71
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 72 NFDMIKGKSI 81
>gi|355687608|gb|EHH26192.1| hypothetical protein EGK_16094 [Macaca mulatta]
gi|355749570|gb|EHH53969.1| hypothetical protein EGM_14691 [Macaca fascicularis]
Length = 370
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T I+IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 184 SKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 242
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 243 AKKAVEEMNGRDINGQLIFVGRAQ 266
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 94 RSGIGNVFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 151
Query: 131 LAVENMNGKF------FYGRF 145
A+E MNGK F GRF
Sbjct: 152 RAIEEMNGKLLKSCKVFVGRF 172
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +++ + +++ FS FG +++VK++ ++ Q G F+ FS E A A+ M
Sbjct: 295 LYVKNLDDTIDDEKLRNEFSSFGSIIRVKVMQQE--GQSKGFGFICFSSLEDATKAMIEM 352
Query: 137 NGKFFYGRFILVKIAET 153
NG F + I + +A++
Sbjct: 353 NGCFLGSKPISIALAQS 369
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 12 LYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDTM 71
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 72 NFDIIKGKSI 81
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 12/86 (13%)
Query: 59 SGSNSSNST-----ESD-TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
+G ++SN T +SD S+ T IF+ G+ +T+ +++ FSQFGEVV VK+ T K
Sbjct: 269 AGGHASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGK-- 326
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
G AFV F+ +++A+ A++++NG
Sbjct: 327 ----GCAFVQFANRKNAEDALQSLNG 348
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I++K L ++ E R++ FSQFG + VK++ + + Q G FV F + E A AV+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAE 152
+MNGK G+ + V A+
Sbjct: 250 HMNGKEVSGQLLYVGRAQ 267
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +S+ + R+K+ FS +G + K++TE S G FV FS E A AV M
Sbjct: 296 LYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGTKPLYVALAQ 369
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L S+ + FS FG ++ K+V + + G FV F E+A A+ M
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFG--FVHFETHEAAQKAINTM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 28 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 84
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 85 GQSLGYGFVNYIDPKDAEKAINTLNG 110
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 135 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 194
Query: 137 NGK 139
NG+
Sbjct: 195 NGQ 197
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
SSRT I++ LP + E V+ FS++G VVQ+ + K+ +P G AFV F AD
Sbjct: 5 SSRT-IYVGNLPGDIREREVEDLFSKYGPVVQIDL---KIPPRPPGYAFVEFEDARDADD 60
Query: 132 AVENMNGKFFYGRFILVKIAETG 154
A+ +G F G + V++A G
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGG 83
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|346977782|gb|EGY21234.1| RNA-binding motif protein [Verticillium dahliae VdLs.17]
Length = 333
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP M+EG V FSQFGE V +K+ +K + + G ++ + + S DLAV+N+
Sbjct: 35 IYFGGLPYEMSEGDVITIFSQFGEPVWLKLARDKETGKAKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
G R + V A RYKF
Sbjct: 95 GGATIGSRMVRVDHA------------RYKF 113
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKRVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|194332974|ref|YP_002014834.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194310792|gb|ACF45187.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP ++TE +++AF++FG+V I+ +K S + G FV E A+ A++++
Sbjct: 3 IYIGNLPYNITEDDLREAFNEFGQVDSANIIIDKFSGRSKGFGFVEMPNDEDAEKAIDSL 62
Query: 137 NGKFFYGRFILVKIA 151
N F GR I V A
Sbjct: 63 NDTDFNGRTIKVNQA 77
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 44 SVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQ 103
S + YS + ++ T+SD S+ T +F+ GL +T+ ++++FSQFG VV
Sbjct: 261 SAMQQYSSQGGHASNGAATQTSQTDSDLSNTT-VFVGGLDSDVTDEELRQSFSQFGNVVS 319
Query: 104 VKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
VKI K G FV FS + +A+ A+E +NG
Sbjct: 320 VKIPAGK------GCGFVQFSERSAAEDAIEKLNG 348
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I L + M EG + F+Q GEV+ VK++ K + Q F+ F+ E+A+ +++
Sbjct: 81 IWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSY 140
Query: 137 NG 138
NG
Sbjct: 141 NG 142
>gi|194760456|ref|XP_001962456.1| GF14433 [Drosophila ananassae]
gi|190616153|gb|EDV31677.1| GF14433 [Drosophila ananassae]
Length = 155
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ G P ++TEG + FSQ+GEVV + +V + + + G F+ + + S LAV+N+
Sbjct: 36 IFVAGFPYTLTEGDLICVFSQYGEVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
Query: 137 NG 138
NG
Sbjct: 96 NG 97
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I++K L ++ E R++ FSQFG + VK++ + + Q G FV F + E A AV+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAE 152
+MNGK G+ + V A+
Sbjct: 250 HMNGKEVSGQLLYVGRAQ 267
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +S+ + R+K+ FS +G + K++TE S G FV FS E A AV M
Sbjct: 296 LYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGTKPLYVALAQ 369
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L S+ + FS FG ++ K+V + + G FV F E+A A+ M
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFG--FVHFETHEAAQKAINTM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 34 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 90
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 91 GQSLGYGFVNYIDPKDAEKAINTLNG 116
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 141 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 200
Query: 137 NGK 139
NG+
Sbjct: 201 NGQ 203
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F + E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFEKHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELSGKQIYVGRAQKKVER 272
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|390460450|ref|XP_002745401.2| PREDICTED: polyadenylate-binding protein 4-like [Callithrix
jacchus]
Length = 384
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T ++IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 184 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 242
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 243 AKKAVEEMNGRDINGQLIFVARAQ 266
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 94 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 151
Query: 131 LAVENMNGKF------FYGRF 145
A+E MNGK F GRF
Sbjct: 152 RAIEEMNGKLLQGCKVFVGRF 172
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 295 LYVKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDALKAMTEM 352
Query: 137 NGKFF 141
NG+
Sbjct: 353 NGRIL 357
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I +++++ LG A+V F A A++ M
Sbjct: 12 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQKALDTM 71
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 72 NFDIIKGKSI 81
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL T+ +++ AF+ FG +++ K+VT+++S + G FV ++ E A+ A + M
Sbjct: 62 LFVSGLSRLTTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAERARQEM 121
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 122 NAKFLDGWVIFVDPAK 137
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 34 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 90
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 91 GQSLGYGFVNYIDPKDAEKAINTLNG 116
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 141 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 200
Query: 137 NGK 139
NG+
Sbjct: 201 NGQ 203
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 82 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 140
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 141 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 172
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 187 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 244
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 245 NGRIVATKPLYVALAQ 260
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 95 FSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG------KFFYGRF 145
FS FG ++ K+V ++ + G FV F +E+A+ A+E MNG K F GRF
Sbjct: 10 FSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRF 64
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL S+ + +K FS++GE+ K++ +K + + G FV + + A+E +
Sbjct: 3 IFIAGLSYSINDNDLKDLFSEYGEITSAKVIMDKATGRSKGYGFVELADNAAGQKAIEEL 62
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRT 163
NG + GR I V A +R RR+
Sbjct: 63 NGAEYDGRTISVSEARPRTEGDRPRRS 89
>gi|242036065|ref|XP_002465427.1| hypothetical protein SORBIDRAFT_01g038690 [Sorghum bicolor]
gi|241919281|gb|EER92425.1| hypothetical protein SORBIDRAFT_01g038690 [Sorghum bicolor]
Length = 727
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++I LP +M + + FSQFG++V K++ ++ + Q G FV +S A+ A+
Sbjct: 428 TNLYIGYLPPTMDDAGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIA 487
Query: 135 NMNGKFFYGRFILVKIA 151
MNG GR I V++A
Sbjct: 488 AMNGHHLEGRVIAVRVA 504
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + + +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSK-GFGFVSYEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFE 281
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 48 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 104
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 105 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 143
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 214
Query: 137 NGK 139
NG+
Sbjct: 215 NGQ 217
>gi|430812740|emb|CCJ29861.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 185
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 60 GSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSA 119
G++ S S + I+I GLP +TEG + FSQ+GE + + ++ +K + + G
Sbjct: 14 GASESESWHAQYKDSAYIYIGGLPYDLTEGDIICIFSQYGEPLDINLIRDKKTGKSKGFC 73
Query: 120 FVWFSRKESADLAVENMNGKFFYGRFILV 148
F+ + + S LAV+N++G GR + V
Sbjct: 74 FLKYEDQRSTILAVDNLSGAKVLGRTLKV 102
>gi|357514871|ref|XP_003627724.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355521746|gb|AET02200.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 815
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 34 ALTSNNSSSVSVSRIYSHPSLQ-----------TKCSGSNSSNSTESDTSSRTGIFIKGL 82
++ + N+ +V + + P+L T +GS++++ D SRT IF +
Sbjct: 587 SMVNENAKTVKIDSGKAKPTLDLLKVTQKAQPSTPGTGSSAASCPLDDADSRT-IFASNV 645
Query: 83 PESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFY 142
+ T+ + + F++FGEV++ IVT+ ++ +P G+A+V F KE+AD A+ +++G F
Sbjct: 646 HFAATKDAICRHFNKFGEVLKAVIVTDSITGKPKGAAYVEFMYKEAADNAL-SLDGTSFM 704
Query: 143 GRFILV 148
R + V
Sbjct: 705 SRILKV 710
>gi|156085834|ref|XP_001610326.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797579|gb|EDO06758.1| RNA recognition motif containing protein [Babesia bovis]
Length = 187
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ LP+++ E ++K F QFG V +++++ K + G F+ F E A +A E M
Sbjct: 12 IYVGNLPKALNESNIRKYFEQFGTVKKIRLMKSKKTGNSRGYCFLQFESNEIAKIAAEAM 71
Query: 137 NGKFFYGRFILVKIAE 152
N F GR + V++ E
Sbjct: 72 NNYFIDGRVLKVEVKE 87
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F + E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFEKHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELSGKQIYVGRAQKKVER 272
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMME--GGRSRGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG + + V +A
Sbjct: 354 NGIIVATKPLYVSLAH 369
>gi|302420537|ref|XP_003008099.1| U2 snRNP component IST3 [Verticillium albo-atrum VaMs.102]
gi|261353750|gb|EEY16178.1| U2 snRNP component IST3 [Verticillium albo-atrum VaMs.102]
Length = 333
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP M+EG V FSQFGE V +K+ +K + + G ++ + + S DLAV+N+
Sbjct: 35 IYFGGLPYEMSEGDVITIFSQFGEPVWLKLARDKETGKAKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIAETGLSKNRGRRTRYKF 167
G R + V A RYKF
Sbjct: 95 GGATIGSRMVRVDHA------------RYKF 113
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 49 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 105
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 106 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 144
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 156 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 215
Query: 137 NGK 139
NG+
Sbjct: 216 NGQ 218
>gi|443900412|dbj|GAC77738.1| splicing factor 3b, subunit 4 [Pseudozyma antarctica T-34]
Length = 319
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQV-KIVTEKLSKQPLGSAFVWFSRKESADLAVEN 135
+F+ L ++ E + + FS FG +V + K+ + + +P G AFV F E+AD AVE
Sbjct: 152 LFVGSLDPAVDEHLLYETFSAFGNIVGLPKVARDPATGEPKGYAFVSFDSFEAADAAVEA 211
Query: 136 MNGKFFYGRFILVKIAETGLSKNRGRR 162
+NG+F + I V A SKN R
Sbjct: 212 LNGQFLLNKNITVDYAIKKDSKNGERH 238
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 62 NSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFV 121
+ S E D + +I L E T+ V + Q G +V + + +++S+ G AF
Sbjct: 50 DMSRPPELDRNQDATCYIGNLDERATDAIVWELMIQAGPLVNLHLPKDRISQTHQGYAFA 109
Query: 122 WFSRKESADLAVENMNGKFFYGRFILVKIA 151
F ++ AD A + MNG YG+ I V A
Sbjct: 110 EFQTEQDADYACKVMNGLKLYGKPIRVNKA 139
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + + +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSK-GFGFVSYEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSK 157
MNGK G+ I V A+ + +
Sbjct: 250 EMNGKEINGKIIFVGRAQKKVER 272
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 58 CSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
+GS + S S+ IF+ G+ +T+ +++ FSQFGEVV VKI K G
Sbjct: 304 ANGSMAHGSQSDGESTNATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPVGK------G 357
Query: 118 SAFVWFSRKESADLAVENMNG 138
FV F+ ++SA+ A+E +NG
Sbjct: 358 CGFVQFAERKSAEDAIETLNG 378
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L M E + FS GEV VK++ KL+ Q G F+ F + +A+ ++N
Sbjct: 110 LWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQNY 169
Query: 137 NGKFF 141
+G
Sbjct: 170 SGSLM 174
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 34 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 90
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 91 GQSLGYGFVNYIDPKDAEKAINTLNG 116
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 141 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 200
Query: 137 NGK 139
NG+
Sbjct: 201 NGQ 203
>gi|358396474|gb|EHK45855.1| hypothetical protein TRIATDRAFT_283470 [Trichoderma atroviride IMI
206040]
Length = 332
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++ GLP ++EG + FSQFGE V +K+V +K + + G ++ + + S DLAV+N+
Sbjct: 35 VYFGGLPYELSEGDIATIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIA 151
G GR + V A
Sbjct: 95 GGAEIGGRLLRVDHA 109
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL T+ ++ +AF+ FG++++ K++T++ S + G FV ++ E A+ A + M
Sbjct: 33 LFISGLSRQTTDRKLNEAFAPFGQLIEAKVITDRASGRSKGFGFVSYASIEEAEKAGKGM 92
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 93 NAKFLDGWVIFVDPAK 108
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 49 YSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVT 108
YSHPSL + IF+ LP+ ++E ++K F +FG++V V +
Sbjct: 11 YSHPSLSIHS------------IPTMPKIFVGNLPQEISEPELEKTFGEFGKIVNVIL-- 56
Query: 109 EKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
K ++P AF+ + A+ AV+ M+GK +G I V+I+ G +R +
Sbjct: 57 -KFPRRPPPFAFIEYEDLRDAEDAVQQMHGKELHGAEIRVEISRNGPKASRDEK 109
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 48 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 104
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 105 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 143
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 214
Query: 137 NGK 139
NG+
Sbjct: 215 NGQ 217
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S SSRT I++ LP + E V+ FS++G VVQ+ + K+ +P G AFV F
Sbjct: 2 SSRSSRT-IYVGNLPGDIREREVEDLFSKYGPVVQIDL---KIPPRPPGYAFVEFEDARD 57
Query: 129 ADLAVENMNGKFFYGRFILVKIAETG 154
AD A+ +G F G + V++A G
Sbjct: 58 ADDAIYGRDGYDFDGHHLRVELAHGG 83
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + +G +K+ FSQFG+ + VK++ + S + G FV + + E A+ AV+
Sbjct: 92 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS-SGKSRGFGFVSYEKHEDANKAVD 150
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 151 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFE 182
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 2 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 59
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 60 NGLLLNDRKVFVGRF 74
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV F +E A AV M
Sbjct: 197 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFPSREEATKAVTEM 254
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 255 NGRIVGSKPLYVALAQ 270
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T ++IK + M + R++ FS++G+ + VK++T+ K G FV F E+
Sbjct: 184 SRASEFTNVYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTDSSGKSK-GFGFVSFESHEA 242
Query: 129 ADLAVENMNGKFFYGRFILVKIAETGLSK 157
A AVE MNGK G+ + V A+ + +
Sbjct: 243 AKRAVEEMNGKDMNGQLVFVGRAQKKVER 271
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI F+K L S+ + + FS FG+++ K++++ + G AFV F + +A+
Sbjct: 94 RSGIGNVFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSDDQGSK--GYAFVHFQSQSAAN 151
Query: 131 LAVENMNGKFFYGRFILV 148
A+E MNGK R + V
Sbjct: 152 CAIEQMNGKVINDRPVFV 169
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +++ + +++K FS FG + +VK++ E+ + G + FS E A A+ M
Sbjct: 295 LYVKNLDDTVDDEQLRKEFSSFGSITRVKVMKEEGYSRGFG--LICFSSPEEAAKALTEM 352
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 353 NGRVLGSKALSIALAQ 368
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L TE + + FS G V+ ++I + ++QPLG A+V F + A A++ M
Sbjct: 12 LYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDTM 71
Query: 137 NGKFFYGR 144
N GR
Sbjct: 72 NFDVIKGR 79
>gi|341901304|gb|EGT57239.1| CBN-EXC-7 protein [Caenorhabditis brenneri]
Length = 459
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
+D + +++ G+P+SMT ++ F FG+++ +I+++ ++ G FV F +K+
Sbjct: 122 NDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDE 181
Query: 129 ADLAVENMNGKFFYG--RFILVKIAETGLSKN 158
AD+A++ +NG G I VK A S N
Sbjct: 182 ADVAIKTLNGSIPTGCSEQITVKFANNPASNN 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 37 SNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFS 96
+NN + V ++ S Q C+ N S+T + I LP+ MT+ V+ F+
Sbjct: 9 NNNMPTGPVQTQNTYTSTQRYCTAPNVDIG-----ESKTNLIINYLPQGMTQEEVRSLFT 63
Query: 97 QFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
GE+ K+V +K++ Q LG FV + ++ A AV + NG + I V A
Sbjct: 64 SIGEIESCKLVRDKVTGQSLGYGFVNYVQEADALRAVSSFNGLRLQNKTIKVSYA 118
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ L + + + FSQFG ++ VKI+ + L+++ G AFV S A A+ ++
Sbjct: 379 LFVYNLAADTDDTLLWQLFSQFGAILNVKILRD-LTQKCKGYAFVSMSTYTEAYNAMVSL 437
Query: 137 NGKFFYGRFILV 148
NG G+ + V
Sbjct: 438 NGTNLAGKTLQV 449
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + VK++T++ K G FV F + E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS-KGFGFVSFEKHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELSGKQIYVGRAQKKVER 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK--GFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ K+V ++ + G FV F E+A+ A+E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 50/83 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F++ LP + E +++ FS+FG + QV +V +K +K+ G A++ ++ ESA A+E +
Sbjct: 265 LFVRNLPYTAIEDELEEHFSKFGNISQVHLVVDKDTKRSKGLAYIHYTLPESAARALEEL 324
Query: 137 NGKFFYGRFILVKIAETGLSKNR 159
+ F GR + V A+ + N+
Sbjct: 325 DNSIFQGRLLHVMPAKQKILSNK 347
>gi|62733051|gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77549578|gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|222615796|gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japonica Group]
Length = 465
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP TE +++ FGE+ +V+++ +K +K+ G AFV F+ KE+A A+E +
Sbjct: 106 VFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKEAAQRAIEEL 165
Query: 137 NGKFFYGRFILVKIAET 153
+ K GR + +++
Sbjct: 166 HDKEHKGRTLRCSLSQA 182
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS-KQPLGSAFVWFSRKESADLAVEN 135
I++K LPE+ ++ ++K+ F + GEV +V + K K+ G FV F+ + SA AV+
Sbjct: 282 IYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHKRDFG--FVHFAERSSALKAVKG 339
Query: 136 MNGKFFYGRFILVKIA 151
F G+ + V +A
Sbjct: 340 SEKYEFNGQVLEVSMA 355
>gi|82232856|sp|Q5SP50.1|ZCRB1_DANRE RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
Length = 218
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S++ +++ +P S+T + K S++G+VV+V IV +K ++ G AFV F +ESA
Sbjct: 8 SKSTVYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDRESAYNC 67
Query: 133 VENMNGKFFYGRFILVKIA 151
++N K +GR + IA
Sbjct: 68 SRSLNNKQLFGRMVKASIA 86
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 49 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 105
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 106 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 144
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 156 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 215
Query: 137 NGK 139
NG+
Sbjct: 216 NGQ 218
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + + AFS +GEV++ KI+ ++ +++ G FV FS +++ A+E MN
Sbjct: 11 FVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNEAQS 86
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEGGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F +FG + VK++T++ S G FV F R E A AVE
Sbjct: 191 TNVYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDE-SGTSKGFGFVNFERHEDAQKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRR 162
MNGK G+ I V G ++ +G R
Sbjct: 250 EMNGKELNGKKIYV-----GRAQKKGER 272
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +++A+ A++ M
Sbjct: 101 IFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSK--GYGFVHFETRDAAERAIDKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRNKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + + +A+
Sbjct: 354 NGRIVATKPLYIALAQ 369
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L ++E + + FS G ++ +++ + ++++ LG A+V F + A+ A+E M
Sbjct: 13 LYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALETM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 58 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 114
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 115 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 153
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 165 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 224
Query: 137 NGK 139
NG+
Sbjct: 225 NGQ 227
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 59 SGSNSSN------STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
+G N+SN S + S+ T IF+ GL +T+ ++++FSQFGEVV VKI K
Sbjct: 199 AGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGK-- 256
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
G FV F+ + SA+ A++ +NG
Sbjct: 257 ----GCGFVQFANRNSAEDALQRLNG 278
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TVNNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|388582029|gb|EIM22335.1| hypothetical protein WALSEDRAFT_56985 [Wallemia sebi CBS 633.66]
Length = 218
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++I GL +TEG V SQFGE+ + + +K + + G AFV + + S LAV+N+
Sbjct: 34 VYIGGLVTGLTEGDVITILSQFGEIADINMPKDKATGKSRGFAFVMYEDQRSTVLAVDNL 93
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 94 NGSTVLGRTLRV 105
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|414869375|tpg|DAA47932.1| TPA: hypothetical protein ZEAMMB73_433523 [Zea mays]
Length = 694
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 26 IPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSN-------SSNSTESDTSSRTGIF 78
+ +P+++ + SN +S + ++ H +Q S S++ D SRT ++
Sbjct: 481 VEKPYVA-PMNSNATSVATNTKELGHAEVQKDSQRSAPSVPVSYSTSHPTVDADSRT-LY 538
Query: 79 IKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
+ + + T+ + + F++FG V++V IVT + QP GSA+V F KESA+ A+ ++NG
Sbjct: 539 VSNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERAL-SLNG 597
Query: 139 KFFYGRFILV 148
F R + V
Sbjct: 598 TSFMTRILKV 607
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T ++IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 184 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 242
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 243 AKKAVEEMNGRDINGQLIFVGRAQ 266
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 94 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 151
Query: 131 LAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
A+E MNGK G + V G KNR R
Sbjct: 152 RAIEEMNGKLLKGCKVFV-----GRFKNRKDR 178
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 295 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEM 352
Query: 137 NGKFF 141
NG+
Sbjct: 353 NGRIL 357
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 12 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 72 NFDIIKGKSI 81
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDIKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRVVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 59 SGSNSSNSTESD-TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLG 117
+G + N + SD S+ + IF+ GL +TE + + FS FGEVV VKI K G
Sbjct: 310 AGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGK------G 363
Query: 118 SAFVWFSRKESADLAVENMNG 138
FV F+ ++SA+ A+ N+NG
Sbjct: 364 CGFVQFANRQSAEEAIGNLNG 384
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 195 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 253
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 254 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 285
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 105 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 162
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 163 NGMLLNDRKVFVGRF 177
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 300 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 357
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 358 NGRIVATKPLYVALAQ 373
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ ++I +K++++ LG A+V + + A A+E +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETL 72
Query: 137 NGKFFYGR 144
N GR
Sbjct: 73 NFDVIKGR 80
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGINDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + ++KAFSQ+GE++ KI+ ++ + + G FV F+ ++S A+E MN
Sbjct: 11 FVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEGMN 70
Query: 138 GKFFYGRFILVKIAET 153
G+ GR I V A++
Sbjct: 71 GQDMDGRNITVNEAQS 86
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TVNNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK E M + R+K F +FG + V+++T++ K G FV F R E A AV+ M
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVELMTDESGKSK-GFGFVSFERHEDAQKAVDEM 251
Query: 137 NGKFFYGRFILVKIAETGLSK 157
NGK G+ I V A+ + +
Sbjct: 252 NGKELNGKQIYVGRAQKKVER 272
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++KAFS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+K L +S+ + S FG ++ +V ++ + G FV F E+A+ A++ M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKKM 158
Query: 137 NGKFFYGRFILV 148
NG GR + V
Sbjct: 159 NGMLLNGRKVFV 170
>gi|242012725|ref|XP_002427078.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
gi|212511336|gb|EEB14340.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
Length = 158
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 71 TSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
T+ + I+ GL E + E + AF FG+++ ++I + +++ G AF+ F E A
Sbjct: 3 TNQKRTIYAGGLAEEVDENVLNAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFESAEDAA 62
Query: 131 LAVENMNGKFFYGRFILVKIA 151
A++NMN +GR I V +A
Sbjct: 63 AAIDNMNDSELFGRTIRVNLA 83
>gi|253722793|pdb|1D8Z|A Chain A, Solution Structure Of The First Rna-Binding Domain (Rbd1)
Of Hu Antigen C (Huc)
Length = 89
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
S+T + + LP++MT+ K F G++ K+V +K++ Q LG FV +S AD
Sbjct: 2 DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADK 61
Query: 132 AVENMNG 138
A+ +NG
Sbjct: 62 AINTLNG 68
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AFS +GE++ KI+ ++ + + LG F+ FS ++S A+E MN
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAIEGMN 70
Query: 138 GKFFYGRFILVKIAE 152
GK GR I V A+
Sbjct: 71 GKELDGRNITVNEAQ 85
>gi|268531492|ref|XP_002630872.1| Hypothetical protein CBG02589 [Caenorhabditis briggsae]
Length = 302
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GL +++EG V FSQ+GEV+ + ++ +K + + G AF+ + + S LAV+N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNF 99
Query: 137 NGKFFYGRFILVKIAE 152
NG + R I V E
Sbjct: 100 NGITLHKRMIRVDHVE 115
>gi|159476822|ref|XP_001696510.1| eukaryotic translation initiation factor [Chlamydomonas
reinhardtii]
gi|158282735|gb|EDP08487.1| eukaryotic translation initiation factor [Chlamydomonas
reinhardtii]
Length = 280
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 49 YSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVT 108
Y PSL+ + G S + + +S I + L E +TEG +++ F FG V ++ +
Sbjct: 178 YVPPSLRNRGPGDGESMQKKREDNS---IRVTNLSEDVTEGDLQELFRPFGAVSRIFLAV 234
Query: 109 EKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFIL 147
+K + + G AFV + ++ AD A+ N+NG F Y IL
Sbjct: 235 DKNTGENRGFAFVNYVHRDDADRAIRNLNG-FGYDNLIL 272
>gi|157138134|ref|XP_001664142.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108869557|gb|EAT33782.1| AAEL013948-PA [Aedes aegypti]
Length = 304
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GL + +TE + AF FG++V +++ + S++ G AF+ F E A AV+NM
Sbjct: 8 VYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAAAAVDNM 67
Query: 137 NGKFFYGRFILVKIAE 152
N GR I V IA+
Sbjct: 68 NDSELCGRTIRVNIAK 83
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F++ LP + TE +++ F ++G V +V +V +K +++ G A++ ++ ESA A+E +
Sbjct: 293 LFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEEL 352
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
+ F GR + V AE ++ G
Sbjct: 353 DNSIFQGRLLHVMPAELKNTRETG 376
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D++SR I +K LP+ + + R++ FS+ GE+ VK++ K K AF+ F + A
Sbjct: 3 DSTSR--ICVKNLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGK-SRQFAFIGFRTEHEA 59
Query: 130 DLAVENMNGKFF 141
A+ N F
Sbjct: 60 QEAIRYFNKSFI 71
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TVNNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + +++ FSQFG+V+ KI+ ++ S + G FV F +++ A+E MN
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 69 GKELDGRVITVNEAQS 84
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNSCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
F+ L S T+ +K AF +FG V + K+V +K S + G FV F K++ + AVE M
Sbjct: 9 CFVGSLSWSTTDVDLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVEAM 68
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V+ A+
Sbjct: 69 NGIDLDGRNITVERAQ 84
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TVNNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|391344304|ref|XP_003746441.1| PREDICTED: ELAV-like protein 4-like [Metaseiulus occidentalis]
Length = 394
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
S+T + + LP++MT+ ++ FS GEV K++ +K++ Q LG FV + E+A+
Sbjct: 64 DSKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVCAEAAEK 123
Query: 132 AVENMNGKFFYGRFILVKIA 151
A+ +NG + I V A
Sbjct: 124 AINTLNGLRLQNKTIKVSYA 143
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKI----VTEKLSKQPLGSAFVWFSRKESADLA 132
+++ GLP+SMT+ +++ F+ +G ++ +I +T LSK G FV F ++ A+ A
Sbjct: 155 LYVSGLPKSMTQQDLEQLFAPYGGIITSRILCDNITAGLSK---GVGFVRFDQRVEAERA 211
Query: 133 VENMN 137
+++++
Sbjct: 212 IKHLH 216
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TVNNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F++ LP + TE +++ F ++G V +V +V +K +++ G A++ ++ ESA A+E +
Sbjct: 293 LFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEEL 352
Query: 137 NGKFFYGRFILVKIAE 152
+ F GR + V AE
Sbjct: 353 DNSIFQGRLLHVMPAE 368
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
D++SR I +K LP+ + + R++ FS+ GE+ VK++ K K AF+ F + A
Sbjct: 3 DSTSR--ICVKNLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGK-SRQFAFIGFRTEHEA 59
Query: 130 DLAVENMNGKFF 141
A+ N F
Sbjct: 60 QEAIRYFNKSFI 71
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 67 TESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRK 126
T+SD S+ T +F+ GL +T+ ++++FSQFG VV VKI K G FV FS +
Sbjct: 289 TDSDLSNTT-VFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAGK------GCGFVQFSER 341
Query: 127 ESADLAVENMNG 138
+A+ A+E +NG
Sbjct: 342 SAAEDAIEKLNG 353
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I L + M EG + F+Q GEV+ VK++ K + Q F+ F+ E+A+ +++
Sbjct: 81 IWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSY 140
Query: 137 NG 138
NG
Sbjct: 141 NG 142
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ P TE + FSQ G V V+IV ++ + +P G AFV +S ++SA AV +
Sbjct: 7 VYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVNEL 66
Query: 137 NGKFFYGRFILVKIA 151
NG F GR + V +A
Sbjct: 67 NGADFNGRQLRVNLA 81
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 191 TNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSK-GFGFVSYEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFE 281
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 191 TNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSK-GFGFVSYEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFE 281
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|373957248|ref|ZP_09617208.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373893848|gb|EHQ29745.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 112
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F G P+ M E + FS FG+V VKI+T++ + G AF+ F + A+LA++ +
Sbjct: 4 LFTVGFPKEMDEAALHTFFSDFGDVAAVKIITDQETGSSKGYAFIDFLDEVGANLAIKEL 63
Query: 137 NGKFFYGRFILVKIAE 152
+G GR + V++A+
Sbjct: 64 DGSTLEGRTLGVRLAD 79
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL T+ +++ AF+ FG +++ K+VT+++S + G FV ++ E A+ A + M
Sbjct: 65 LFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYATIEEAEKARQEM 124
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 125 NAKFLDGWVIFVDPAK 140
>gi|413925276|gb|AFW65208.1| hypothetical protein ZEAMMB73_925630 [Zea mays]
Length = 695
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 26 IPRPFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSN-------SSNSTESDTSSRTGIF 78
+ +P+++ + SN +S + ++ H +Q S S+ D SRT ++
Sbjct: 482 VEKPYVA-PMNSNAASIATNAKELGHAEVQKDSQRSAPSVPVSYSTAHPMEDADSRT-LY 539
Query: 79 IKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG 138
+ + + T+ + + F++FG V++V IVT + QP GSA+V F KESA+ A+ ++NG
Sbjct: 540 VNNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERAL-SLNG 598
Query: 139 KFFYGRFILV 148
F R + V
Sbjct: 599 TSFMTRILKV 608
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TINNSCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNG 102
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|193211762|ref|YP_001997715.1| RNP-1 like RNA-binding protein [Chlorobaculum parvum NCIB 8327]
gi|193085239|gb|ACF10515.1| RNP-1 like RNA-binding protein [Chlorobaculum parvum NCIB 8327]
Length = 90
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I LP S++E ++ AFS+FG+V I+T+K S + G FV A A++ M
Sbjct: 3 IYIGNLPYSVSEDDLRDAFSEFGQVHSANIITDKFSGRSKGFGFVDMPNDGEAREAIDAM 62
Query: 137 NGKFFYGRFILVKIA 151
N K F GR I V A
Sbjct: 63 NDKDFKGRTIKVNEA 77
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GL T+ +++ F QFG+V + +V ++ + + G FV FS AD A++ M
Sbjct: 4 LFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMDAM 63
Query: 137 NGKFFYGRFILVKIAETGLSKNRG 160
N + F GR I V A +N G
Sbjct: 64 NNQEFDGRTIRVDKASERAPRNNG 87
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I++ L + T+ +++AF+ FGEV QV ++++K + Q G FV AD A++ +
Sbjct: 3 IYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKGL 62
Query: 137 NGKFFYGRFILVKIAE 152
NG GR I V A+
Sbjct: 63 NGTDLQGRSIKVNEAK 78
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP ++EG + FSQFGE V +K+ +K + + G ++ + + S DLAV+N+
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 137 NGKFFYGRFILVKIAETGLSKN 158
+G GR I V A L +
Sbjct: 95 SGAEIGGRLIRVDHARYKLRDD 116
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+F+ GL T+ ++K+AFS FG++V K++ ++ S + G F+ ++ E A+ A E M
Sbjct: 38 LFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGFGFITYATIEEAEKAREGM 97
Query: 137 NGKFFYGRFILVKIAE 152
N KF G I V A+
Sbjct: 98 NAKFLDGWVIFVDPAK 113
>gi|17532167|ref|NP_495237.1| Protein C30B5.4 [Caenorhabditis elegans]
gi|351058643|emb|CCD66136.1| Protein C30B5.4 [Caenorhabditis elegans]
Length = 302
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+I GL +++EG V FSQ+GEV+ + ++ +K + + G AF+ + + S LAV+N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 137 NGKFFYGRFILVKIAE 152
NG + R I V E
Sbjct: 100 NGISLHKRMIRVDHVE 115
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+GS + S SS T IF+ GL +T+ ++++F+QFGEVV VKI K G
Sbjct: 228 NGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGK------GC 281
Query: 119 AFVWFSRKESADLAVENMNG 138
FV FS + SA A++ ++G
Sbjct: 282 GFVQFSDRSSAQEAIQKLSG 301
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
NS+E + + I+I L + M E + FS GEV+ VKI+ K + Q FV F+
Sbjct: 27 NSSEDNKT----IWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFN 82
Query: 125 RKESADLAVENMNG 138
+A+ +++ NG
Sbjct: 83 THAAAEKVLQSYNG 96
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 40 SSSVSVSRIYSHPSLQTKCS-GSNSSNSTESDTSSRT--GIFIKGLPESMTEGRVKKAFS 96
S SV + R L CS G SS + R+ +F+ +P TE ++K FS
Sbjct: 12 SGSVGLRRTAPKNPLAAVCSTGIMSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFS 71
Query: 97 QFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLS 156
+ G VV ++V ++ + +P G F + +E+A A+ N+NG+ F GR + V A + +
Sbjct: 72 EVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKN 131
Query: 157 K 157
K
Sbjct: 132 K 132
>gi|402697297|gb|AFQ90836.1| polyA-binding protein cytoplasmic 1, partial [Testudo hermanni]
Length = 176
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F FG + VK++T++ K G FV F R E A AV
Sbjct: 88 TNVYIKNFGEDMDDERLKELFGXFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVX 146
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 147 EMNGKELNGKQIYVGRAQ 164
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 80 KGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG- 138
K L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E MNG
Sbjct: 1 KNLDKSIDNKALYDXFSAFGNILSCKVVCDENGSKGYG--FVHFETQEAAERAIEKMNGM 58
Query: 139 -----KFFYGRF 145
K F GRF
Sbjct: 59 LLNDRKVFVGRF 70
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 49 YSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVT 108
YSHPSL + IF+ LP+ ++E ++K F +FG++V V +
Sbjct: 11 YSHPSLSIHS------------IPTMPKIFVGNLPQEISEPELEKTFGEFGKIVNVIL-- 56
Query: 109 EKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNR 159
K ++P AF+ + A+ AV+ M+GK +G I V+I+ G +R
Sbjct: 57 -KFPRRPPPFAFIEYEDLRDAEDAVQQMHGKELHGAEIRVEISRNGPKASR 106
>gi|156086052|ref|XP_001610435.1| RNA-binding protein [Babesia bovis T2Bo]
gi|154797688|gb|EDO06867.1| RNA-binding protein, putative [Babesia bovis]
Length = 248
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI GL MTEG + FSQFG+ + + + +K + G F+ + + S LAV+N
Sbjct: 41 IFIGGLHRRMTEGDIIIVFSQFGDPIDIHLKRDKKTGASRGYCFLGYRDQRSTILAVDNF 100
Query: 137 NGKFFYGRFILV 148
NG GR I V
Sbjct: 101 NGSTLLGRRIRV 112
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 34 TVNNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 90
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 91 GQSLGYGFVNYIDPKDAEKAINTLNG 116
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 141 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 200
Query: 137 NGK 139
NG+
Sbjct: 201 NGQ 203
>gi|408395588|gb|EKJ74767.1| hypothetical protein FPSE_05102 [Fusarium pseudograminearum CS3096]
Length = 319
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 59 SGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGS 118
+G S +D ++ GLP ++EG V FSQFGE V +K+ +K + + G
Sbjct: 17 NGITPEGSWHTDYRDTAYVYFGGLPYELSEGDVITIFSQFGEPVWLKLARDKETGKSKGF 76
Query: 119 AFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
++ + + S DLAV+N+ G GR + V A
Sbjct: 77 GWLKYEDQRSTDLAVDNLGGADMGGRLVSVDHA 109
>gi|340516662|gb|EGR46910.1| predicted protein [Trichoderma reesei QM6a]
Length = 93
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
I+ GLP ++EG + FSQ+GE V +K+V +K + + G ++ + + S DLAV+N+
Sbjct: 16 IYFGGLPYDLSEGDIITIFSQYGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 75
Query: 137 NGKFFYGRFILVKIA 151
G GR + V A
Sbjct: 76 GGTEIGGRLLRVDHA 90
>gi|297303177|ref|XP_002806144.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like,
partial [Macaca mulatta]
Length = 265
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 29 PFISKALTSNNSSSVSVSRIYSHPSLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTE 88
P + K + S YS P + G S ++ SD + +FI G+P + +
Sbjct: 154 PPMGKGKGGDYMYEGGYSSKYSAPPV-----GDGISFASPSDGYNPCKLFIGGIPSDLDQ 208
Query: 89 GRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRF 145
GR+ + FSQ+G +V ++ ++++ +P G A+V +S E A A+ + G++
Sbjct: 209 GRLDQFFSQYGNIVDSVVMKDRITGKPRGFAYVTYSTPEEAQTAINAGDANILDGKW 265
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AF+ +GE++ K++T++ + + G FV FS + S A+ENMN
Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNQAQS 86
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 20 TITNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 76
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 77 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186
Query: 137 NGK 139
NG+
Sbjct: 187 NGQ 189
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + + +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 213 TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSK-GFGFVSYEKHEDANKAVE 271
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 272 EMNGKEMSGKAIFVGRAQKKVERQ 295
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 123 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 180
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 181 NGMLLNDRKVFVGRF 195
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 318 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 375
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 376 NGRIVGSKPLYVALAQ 391
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 35 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 94
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 95 NFDVIKGKPIRI 106
>gi|194768871|ref|XP_001966534.1| GF22224 [Drosophila ananassae]
gi|190617298|gb|EDV32822.1| GF22224 [Drosophila ananassae]
Length = 490
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 56 TKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS--- 112
T SG S N + + +RT + + LP++MTE ++ FS GE+ VK++ +K
Sbjct: 137 TNGSGGASQNGSNGSSETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYI 196
Query: 113 ----------KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + R + A+ AV +NG + I V A
Sbjct: 197 DPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFA 245
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSK-QPLGSAFVWFSRKE 127
SD +++ GLP++MT+ ++ F+ FG ++ +I+ + Q G F+ F ++E
Sbjct: 249 SDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKRE 308
Query: 128 SADLAVENMNG 138
A A+ +NG
Sbjct: 309 EATRAIIALNG 319
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI L E + + F FG V VKIV + + Q G FV + + A +A+ +
Sbjct: 411 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 470
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 471 NGYTMGNRVLQV 482
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 69 SDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKES 128
S S T ++IK M + R+K FS++G+ + VK++T+ K G FV F E+
Sbjct: 184 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK-GFGFVSFDSHEA 242
Query: 129 ADLAVENMNGKFFYGRFILVKIAE 152
A AVE MNG+ G+ I V A+
Sbjct: 243 AKKAVEEMNGRDINGQLIFVGRAQ 266
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 74 RTGI---FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESAD 130
R+GI FIK L +S+ + + FS FG+++ K++++ + G AFV F + +AD
Sbjct: 94 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAAD 151
Query: 131 LAVENMNGKFFYGRFILVKIAETGLSKNRGRR 162
A+E MNGK G + V G KNR R
Sbjct: 152 RAIEEMNGKLLKGCKVFV-----GRFKNRKDR 178
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++ FS FG + +VK++ E+ Q G + FS E A A+ M
Sbjct: 295 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEM 352
Query: 137 NGKFF 141
NG+
Sbjct: 353 NGRIL 357
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ ++I ++++++ LG A+V F + A A++ M
Sbjct: 12 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 137 NGKFFYGRFI 146
N G+ I
Sbjct: 72 NFDIIKGKSI 81
>gi|50312205|ref|XP_456134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645270|emb|CAG98842.1| KLLA0F23650p [Kluyveromyces lactis]
Length = 312
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 57 KCSGSNSSNSTESDTSSRTGI-FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQP 115
K S ++ + + E +S +GI +I LP+ E + K FSQFG++ QV++ K +
Sbjct: 164 KQSENDKAKAKEDKSSDLSGILYISRLPQGFKERELSKYFSQFGDLKQVRLARNKKTGNS 223
Query: 116 LGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
AF+ + K+ A +A E+MN G + VK+ G S ++ R + K
Sbjct: 224 RHYAFLEYINKDDAVVAQESMNNYLLMGHLLKVKVLPNGSSIDKLFRYKKK 274
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + ++K+ FS+FG V+++T++ S G FV F E A AV+
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDE-SGGGRGFGFVSFENHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK GR + V A+ + + + R++
Sbjct: 250 EMNGKELNGRIMFVGRAQKKMERQMELKRRFE 281
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F ++A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSR--GYGFVHFETHDAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 37/61 (60%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L + +TE + + FS G +V +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 N 137
N
Sbjct: 73 N 73
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 39/68 (57%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ ++I +K++++ LG A+V + + ++ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +++ LP ++ + + + FS FG++VQ I+ +KL+ +P G AFV FS++E A A+
Sbjct: 206 TNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDALN 265
Query: 135 NMNGKFFYG--RFILVKIAE 152
+N G + I V++AE
Sbjct: 266 TLNNTVPLGCTQPIWVRLAE 285
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 68 ESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKE 127
+ + S T + + LP+ MT+ + + F+ FG + KI+ + + G FV + +
Sbjct: 113 QEERVSSTNLIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTGYSFGYGFVDYRTEA 172
Query: 128 SADLAVENMNGKFFYGRFILVKIAETG 154
+ A++ +NG + + + V A G
Sbjct: 173 DTEEAIDKLNGLYVRNKRLKVSYARPG 199
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I++K L + E R++ FSQFG+++ VK++ + S G FV F + E A AV
Sbjct: 191 TNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVV 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
NMNG+ GR + V A+ + + + R++
Sbjct: 250 NMNGREVSGRLLYVGRAQKRVERQNELKRRFE 281
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +S+ + +++K FS +G + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGTKPLYVALAQ 369
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F E+A A+ M
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFG--FVHFETHEAAQNAISTM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 70 DTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESA 129
DTS IF+ L + +T ++ F +FG++ + ++V + + + G FV F +KESA
Sbjct: 131 DTSKDHHIFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYGFVAFLKKESA 190
Query: 130 DLAVENMNGKFFYGRFI 146
++A+ MN K GR +
Sbjct: 191 EMAITEMNNKSICGREV 207
>gi|195118872|ref|XP_002003957.1| GI20215 [Drosophila mojavensis]
gi|195137572|ref|XP_002012574.1| GI11259 [Drosophila mojavensis]
gi|193906408|gb|EDW05275.1| GI11259 [Drosophila mojavensis]
gi|193914532|gb|EDW13399.1| GI20215 [Drosophila mojavensis]
Length = 183
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFI G P +++EG + FSQ+GEVV + +V + + + G F+ + + S LAV+N+
Sbjct: 36 IFIAGFPYTLSEGDIICVFSQYGEVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 96 NGIKIIDRTLRV 107
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
SSRT I++ LP + E V+ FS++G VVQ+ + K+ +P G AFV F AD
Sbjct: 5 SSRT-IYVGNLPGDIREREVEDLFSKYGPVVQIDL---KIPPRPPGYAFVEFEDARDADD 60
Query: 132 AVENMNGKFFYGRFILVKIAETG 154
A+ +G F G + V++A G
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGG 83
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 211 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 269
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 270 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 301
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 121 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 178
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 179 NGMLLNDRKVFVGRF 193
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 316 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 373
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 374 NGRIVATKPLYVALAQ 389
>gi|194386544|dbj|BAG61082.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 159 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 217
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 218 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 249
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 264 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 321
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 322 NGRIVATKPLYVALAQ 337
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
>gi|401410772|ref|XP_003884834.1| putative RNA binding protein [Neospora caninum Liverpool]
gi|325119252|emb|CBZ54806.1| putative RNA binding protein [Neospora caninum Liverpool]
Length = 369
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 61 SNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAF 120
S S S +S +R +++ LP+ E ++KK FSQFG+V +V++ K + G AF
Sbjct: 120 SQQSRSKKSPVLNRGVVYLGHLPQGFFEPQLKKFFSQFGKVTRVELRRSKRTGNSKGHAF 179
Query: 121 VWFSRKESADLAVENMNGKFFYGRFILVKI 150
V F E AD+ E M+ +GR ++ +
Sbjct: 180 VEFELPEVADIVAEAMDNYMMFGRTLVCHV 209
>gi|297814257|ref|XP_002875012.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320849|gb|EFH51271.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FI GLP + E ++ + GE+ +V+++ ++ S G AFV F K+ A A+E++
Sbjct: 117 VFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEDL 176
Query: 137 NGKFFYGRFILVKIAETGLSKNR 159
+ K F G+ I ++ET KNR
Sbjct: 177 HSKEFKGKTIRCSLSET---KNR 196
>gi|195580271|ref|XP_002079976.1| GD24233 [Drosophila simulans]
gi|194191985|gb|EDX05561.1| GD24233 [Drosophila simulans]
Length = 155
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ G P ++TEG + FSQ+GEVV + ++ + + + G F+ + + S LAV+N+
Sbjct: 36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
Query: 137 NG 138
NG
Sbjct: 96 NG 97
>gi|195484576|ref|XP_002090750.1| GE13281 [Drosophila yakuba]
gi|194176851|gb|EDW90462.1| GE13281 [Drosophila yakuba]
Length = 154
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ G P ++TEG + FSQ+GEVV + ++ + + + G F+ + + S LAV+N+
Sbjct: 36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
Query: 137 NG 138
NG
Sbjct: 96 NG 97
>gi|195345201|ref|XP_002039161.1| GM17378 [Drosophila sechellia]
gi|194134291|gb|EDW55807.1| GM17378 [Drosophila sechellia]
Length = 154
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ G P ++TEG + FSQ+GEVV + ++ + + + G F+ + + S LAV+N+
Sbjct: 36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
Query: 137 NG 138
NG
Sbjct: 96 NG 97
>gi|20129641|ref|NP_610003.1| CG10466, isoform A [Drosophila melanogaster]
gi|442628478|ref|NP_001260601.1| CG10466, isoform B [Drosophila melanogaster]
gi|7298629|gb|AAF53845.1| CG10466, isoform A [Drosophila melanogaster]
gi|440213961|gb|AGB93136.1| CG10466, isoform B [Drosophila melanogaster]
Length = 154
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ G P ++TEG + FSQ+GEVV + ++ + + + G F+ + + S LAV+N+
Sbjct: 36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
Query: 137 NG 138
NG
Sbjct: 96 NG 97
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 88 TINNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 144
Query: 113 KQPLGSAFVWFSRKESADLAVENMNG 138
Q LG FV + + A+ A+ +NG
Sbjct: 145 GQSLGYGFVNYIDPKDAEKAINTLNG 170
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 195 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 254
Query: 137 NGK 139
NG+
Sbjct: 255 NGQ 257
>gi|125527839|gb|EAY75953.1| hypothetical protein OsI_03870 [Oryza sativa Indica Group]
Length = 312
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IF+ GLP S TE ++K+ FS+FGEV +VT+ +K P G F+ F+ +ES A++
Sbjct: 126 IFVGGLPVSATEKKLKEYFSKFGEVNHAIVVTDLNTKMPRGFGFIQFASEESTARALKK- 184
Query: 137 NGKFFYGRFILVKIA 151
+ F G+++ V +A
Sbjct: 185 DRHFLCGQWVEVSLA 199
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 53 SLQTKCSGSNSSNSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLS 112
++ CS S +TE S+T + + LP++MT+ +K F GE+ K+V +K++
Sbjct: 49 TVNNNCSSPVDSGNTED---SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 105
Query: 113 KQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIA 151
Q LG FV + + A+ A+ +NG + I V A
Sbjct: 106 GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 144
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ GLP++MT+ +++ FSQ+G ++ +I+ ++++ G F+ F ++ A+ A++ +
Sbjct: 156 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 215
Query: 137 NGK 139
NG+
Sbjct: 216 NGQ 218
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + +++ FSQFGEV+ KI+ ++ + + G FV F ++S A++ MN
Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 69 GKELDGRTITVNEAQS 84
>gi|402697295|gb|AFQ90835.1| polyA-binding protein cytoplasmic 1, partial [Sternotherus minor]
Length = 175
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F FG + VK++T++ K G FV F R E A AV
Sbjct: 88 TNVYIKNFGEDMDDERLKELFGXFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVX 146
Query: 135 NMNGKFFYGRFILVKIAE 152
MNGK G+ I V A+
Sbjct: 147 EMNGKEXNGKQIYVXRAQ 164
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 80 KGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMNG- 138
K L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E MNG
Sbjct: 1 KNLDKSJDNKALYDXFSAFGNILSCKVVCDENGSKGYG--FVHFETQEAAERAIEKMNGM 58
Query: 139 -----KFFYGRF 145
K F GRF
Sbjct: 59 LLNDRKVFVGRF 70
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 65 NSTESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFS 124
N + DTS IF+ L +T +K F FGE+ K+V + L+ + G FV F
Sbjct: 98 NLPKPDTSQHHHIFVGDLSPDITTETLKNVFVPFGEISDYKVVKDMLTNKSKGYGFVSFV 157
Query: 125 RKESADLAVENMNGKFFYGRFI 146
K A A+E MNG++ R I
Sbjct: 158 EKNDAQTAIEQMNGQWLGSRAI 179
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T I++K L + E R++ FSQFG+++ VK++ + S G FV F + E A AV
Sbjct: 191 TNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVV 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
NMNG+ GR + V A+ + + + R++
Sbjct: 250 NMNGREVSGRLLYVGRAQKRVERQNELKRRFE 281
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L +S+ + +++K FS +G + K++TE + G FV FS E A AV M
Sbjct: 296 LYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGTKPLYVALAQ 369
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F E+A A+ M
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFG--FVHFETHEAAQNAISTM 158
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 159 NGMLLNDRKVFV 170
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T +FI G+ S E +++AFS++GEVV +I+ ++ + + G F+ ++ E A A++
Sbjct: 42 TKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQ 101
Query: 135 NMNGKFFYGRFILVKIA 151
++G+ +GR I V A
Sbjct: 102 ALDGQDLHGRPIRVNYA 118
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 146 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 204
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 205 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 236
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 251 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTGM 308
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 309 NGRIVATKPLYVALAQ 324
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 56 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 113
Query: 137 NGKFFYGRFILV 148
NG R + V
Sbjct: 114 NGMLLNDRKVSV 125
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E + + +K+ FSQFG+ + VK++ + K G FV + + E A+ AVE
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSK-GFGFVSYEKHEDANKAVE 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKN 158
MNGK G+ I V A+ + +
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQ 273
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+FIK L +S+ + FS FG ++ K+V ++ + G AFV F +E+AD A+E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
++IK L +++ + +++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFG--FVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVGSKPLYVALAQ 369
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G V+ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGRFILV 148
N G+ I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+ + AFSQ+GE+V KI+ ++ + + G FV F +++ A+E MN
Sbjct: 9 FVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMN 68
Query: 138 GKFFYGRFILVKIAE 152
G+ GR I V A+
Sbjct: 69 GQDLDGRNITVNEAQ 83
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 127 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 185
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 186 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 217
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 37 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 94
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 95 NGMLLNDRKVFVGRF 109
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 232 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 289
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 290 NGRIVATKPLYVALAQ 305
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AF+ +GE++ K++T++ + + G FV FS + S A+ENMN
Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNQAQS 86
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AF+ +GE++ K++T++ + + G FV FS + S A+ENMN
Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNQAQS 86
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AF+ +GE++ K++T++ + + G FV FS + S A+ENMN
Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNQAQS 86
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AF+ +GE++ K++T++ + + G FV FS + S A+ENMN
Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNQAQS 86
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + + ++ AF+ +GE++ K++T++ + + G FV FS + S A+ENMN
Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70
Query: 138 GKFFYGRFILVKIAET 153
GK GR I V A++
Sbjct: 71 GKELDGRNITVNQAQS 86
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 78 FIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENMN 137
F+ GL + T+ +++AFSQ+GE++ KI+ ++ + + G FV F+ +++ A++ MN
Sbjct: 10 FVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDGMN 69
Query: 138 GKFFYGRFILVKIAE 152
G+ GR I V A+
Sbjct: 70 GQDLDGRNITVNEAQ 84
>gi|15241418|ref|NP_199943.1| splicing factor 1 [Arabidopsis thaliana]
gi|30696034|ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana]
gi|79330558|ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana]
gi|8843867|dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana]
gi|23297082|gb|AAN13087.1| unknown protein [Arabidopsis thaliana]
gi|222423074|dbj|BAH19518.1| AT5G51300 [Arabidopsis thaliana]
gi|222423561|dbj|BAH19750.1| AT5G51300 [Arabidopsis thaliana]
gi|332008680|gb|AED96063.1| splicing factor 1 [Arabidopsis thaliana]
gi|332008681|gb|AED96064.1| splicing factor 1 [Arabidopsis thaliana]
gi|332008682|gb|AED96065.1| splicing factor 1 [Arabidopsis thaliana]
Length = 804
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
T ++I LP + + + FS FGE+V K++ ++++ G FV ++ + A+ A
Sbjct: 478 DETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTA 537
Query: 133 VENMNGKFFYGRFILVKIA 151
V+ MNG F GR + V+IA
Sbjct: 538 VQAMNGYRFEGRTLAVRIA 556
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 178
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 179 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 210
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 30 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 87
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 88 NGMLLNDRKVFVGRF 102
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 225 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 282
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 283 NGRIVATKPLYVALAQ 298
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K F +FG + VK++T++ K G FV F R E A AV+
Sbjct: 132 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 190
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
MNGK G+ I V A+ + + + +++
Sbjct: 191 EMNGKELNGKQIYVGRAQKKVERQTELKRKFE 222
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A+E M
Sbjct: 42 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 99
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 100 NGMLLNDRKVFVGRF 114
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 237 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 294
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 295 NGRIVATKPLYVALAQ 310
>gi|118379755|ref|XP_001023043.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila]
gi|89304810|gb|EAS02798.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila
SB210]
Length = 474
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%)
Query: 72 SSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADL 131
+S + IK LP +++ + F FG + Q+K++ +K + + G AF+ + KESA L
Sbjct: 184 NSSHKLIIKNLPALISDASISNIFDNFGRIQQLKVIRDKKTSECKGHAFIKYYEKESAHL 243
Query: 132 AVENMNGKFFY 142
AV+N+N + Y
Sbjct: 244 AVQNLNKQNIY 254
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 73 SRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLA 132
S + IF+ LP+ E + + FS +G ++ + I K + + G FV F++ A A
Sbjct: 380 SHSNIFVFHLPKQYNEKNLFELFSGYGNIISITIC-RKQNGESRGYGFVSFNQPYEAAHA 438
Query: 133 VENMNGKFFYGRFILVKIAETGLSK-NRGRRT 163
++ +NG G+ I V++ +T + K N ++T
Sbjct: 439 IKELNGLNLMGKRIKVELKQTHIEKVNSNQKT 470
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
T ++IK E M + R+K+ F ++G + VK++T+ K G FV F R E A AV+
Sbjct: 191 TNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGKSK-GFGFVSFERHEDAQKAVD 249
Query: 135 NMNGKFFYGRFILVKIAETGLSKNRGRRTRYK 166
+MNGK G+ I V A+ + + + +++
Sbjct: 250 DMNGKDMNGKAIYVGRAQKKVERQTELKRKFE 281
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
IFIK L +S+ + FS FG ++ K+V ++ + G FV F +E+A+ A++ M
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIDKM 158
Query: 137 NG------KFFYGRF 145
NG K F GRF
Sbjct: 159 NGMLLNDRKVFVGRF 173
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++K L + + + R++K FS FG + K++ E + G FV FS E A AV M
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 137 NGKFFYGRFILVKIAE 152
NG+ + + V +A+
Sbjct: 354 NGRIVATKPLYVALAQ 369
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
+++ L +TE + + FS G ++ +++ + ++++ LG A+V F + A+ A++ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 137 NGKFFYGR 144
N G+
Sbjct: 73 NFDVIKGK 80
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,329,168,733
Number of Sequences: 23463169
Number of extensions: 80858363
Number of successful extensions: 348196
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12819
Number of HSP's successfully gapped in prelim test: 6415
Number of HSP's that attempted gapping in prelim test: 320739
Number of HSP's gapped (non-prelim): 31070
length of query: 167
length of database: 8,064,228,071
effective HSP length: 128
effective length of query: 39
effective length of database: 9,355,909,735
effective search space: 364880479665
effective search space used: 364880479665
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)