Your job contains 1 sequence.
>040635
MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS
PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC
LAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKIECEMGLKSIPANTDGHNIRPTKGG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040635
(177 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2152511 - symbol:AGL80 "AGAMOUS-like 80" speci... 291 1.1e-25 1
TAIR|locus:2009457 - symbol:AGL87 "AGAMOUS-like 87" speci... 284 5.9e-25 1
TAIR|locus:2146774 - symbol:AT5G26630 species:3702 "Arabi... 250 2.4e-21 1
TAIR|locus:2206280 - symbol:PHE1 "PHERES1" species:3702 "... 245 8.0e-21 1
TAIR|locus:2206325 - symbol:AGL38 "AGAMOUS-like 38" speci... 240 2.7e-20 1
TAIR|locus:2146794 - symbol:AGL36 "AGAMOUS-like 36" speci... 230 5.1e-19 1
TAIR|locus:2143769 - symbol:AGL90 "AGAMOUS-like 90" speci... 228 5.1e-19 1
TAIR|locus:2074494 - symbol:AT3G05860 species:3702 "Arabi... 223 1.7e-18 1
TAIR|locus:2028601 - symbol:AGL86 "AGAMOUS-like 86" speci... 221 3.3e-18 1
TAIR|locus:2028591 - symbol:AGL92 "AGAMOUS-like 92" speci... 224 6.5e-18 1
TAIR|locus:2180300 - symbol:AT5G27810 species:3702 "Arabi... 205 1.4e-16 1
TAIR|locus:2054543 - symbol:AGL46 "AGAMOUS-like 46" speci... 198 1.4e-15 1
TAIR|locus:2065092 - symbol:AGL48 "AGAMOUS-like 48" speci... 179 3.0e-13 1
TAIR|locus:2146809 - symbol:AGL34 "AGAMOUS-like-34" speci... 160 3.1e-11 1
TAIR|locus:2144098 - symbol:AGL96 "AGAMOUS-like 96" speci... 146 3.3e-10 1
TAIR|locus:2047304 - symbol:AGL61 "AGAMOUS-like 61" speci... 143 1.1e-09 1
TAIR|locus:2162137 - symbol:AT5G55690 species:3702 "Arabi... 142 1.7e-09 1
TAIR|locus:2040819 - symbol:AGL29 "AGAMOUS-like 29" speci... 124 5.3e-08 1
TAIR|locus:2033273 - symbol:AP1 "AT1G69120" species:3702 ... 127 6.4e-08 1
TAIR|locus:2149264 - symbol:PI "PISTILLATA" species:3702 ... 121 1.4e-07 1
TAIR|locus:2103415 - symbol:AGL91 "AGAMOUS-like 91" speci... 119 1.8e-07 1
TAIR|locus:2053608 - symbol:AGL95 "AGAMOUS-like 95" speci... 122 2.2e-07 1
UNIPROTKB|Q03378 - symbol:GLO "Floral homeotic protein GL... 119 2.9e-07 1
TAIR|locus:2154588 - symbol:AGL82 "AGAMOUS-like 82" speci... 122 3.3e-07 1
TAIR|locus:2028830 - symbol:CAL "CAULIFLOWER" species:370... 119 5.0e-07 1
DICTYBASE|DDB_G0281387 - symbol:srfA "SRF-related protein... 120 1.1e-06 1
TAIR|locus:2044259 - symbol:SEP4 "SEPALLATA 4" species:37... 112 3.5e-06 2
UNIPROTKB|Q9ZS26 - symbol:gglo1 "MADS-box protein, GGLO1"... 114 6.2e-06 1
UNIPROTKB|P23706 - symbol:DEFA "Floral homeotic protein D... 115 7.2e-06 1
TAIR|locus:2175188 - symbol:AGL62 "AGAMOUS-like 62" speci... 116 8.0e-06 1
TAIR|locus:2066050 - symbol:AGL17 "AGAMOUS-like 17" speci... 114 1.1e-05 1
TAIR|locus:2032537 - symbol:AGL59 "AGAMOUS-like 59" speci... 111 1.4e-05 1
UNIPROTKB|F1RP31 - symbol:MEF2D "Uncharacterized protein"... 114 1.7e-05 2
UNIPROTKB|H0YKY6 - symbol:MEF2A "Myocyte-specific enhance... 100 1.9e-05 1
UNIPROTKB|H0YM62 - symbol:MEF2A "Myocyte-specific enhance... 100 1.9e-05 1
UNIPROTKB|I3L7L3 - symbol:LOC100738718 "Uncharacterized p... 100 1.9e-05 1
UNIPROTKB|D6RB91 - symbol:MEF2C "Myocyte-specific enhance... 99 2.4e-05 1
UNIPROTKB|D6RCM6 - symbol:MEF2C "Myocyte-specific enhance... 99 2.4e-05 1
UNIPROTKB|D6RG14 - symbol:MEF2C "Myocyte-specific enhance... 99 2.4e-05 1
UNIPROTKB|D6RG21 - symbol:MEF2C "Myocyte-specific enhance... 99 2.4e-05 1
UNIPROTKB|D6RJA7 - symbol:MEF2C "Myocyte-specific enhance... 99 2.4e-05 1
TAIR|locus:2173522 - symbol:AGL8 "AGAMOUS-like 8" species... 112 3.0e-05 1
TAIR|locus:2144355 - symbol:MAF5 "MADS AFFECTING FLOWERIN... 110 3.5e-05 1
TAIR|locus:2202420 - symbol:AGL102 "AGAMOUS-like 102" spe... 108 4.7e-05 1
UNIPROTKB|J9P151 - symbol:MEF2D "Uncharacterized protein"... 114 5.1e-05 1
UNIPROTKB|F1CYZ1 - symbol:MEF2D "Myocyte enhancer factor ... 114 5.2e-05 1
RGD|621489 - symbol:Mef2d "myocyte enhancer factor 2D" sp... 114 5.2e-05 1
UNIPROTKB|O89038 - symbol:Mef2d "Myocyte-specific enhance... 114 5.2e-05 1
UNIPROTKB|Q5T9U4 - symbol:MEF2D "Myocyte-specific enhance... 114 5.2e-05 1
MGI|MGI:99533 - symbol:Mef2d "myocyte enhancer factor 2D"... 114 5.3e-05 1
UNIPROTKB|F1PDZ9 - symbol:MEF2D "Uncharacterized protein"... 114 5.4e-05 1
UNIPROTKB|Q14814 - symbol:MEF2D "Myocyte-specific enhance... 114 5.4e-05 1
ZFIN|ZDB-GENE-990415-164 - symbol:mef2d "myocyte enhancer... 114 5.5e-05 1
TAIR|locus:2166620 - symbol:AGL77 "AGAMOUS-like 77" speci... 113 5.7e-05 1
CGD|CAL0003752 - symbol:RLM1 species:5476 "Candida albica... 114 6.7e-05 1
UNIPROTKB|Q5AMI4 - symbol:RLM1 "Putative uncharacterized ... 114 6.7e-05 1
TAIR|locus:2042182 - symbol:AGL44 "AGAMOUS-like 44" speci... 109 8.0e-05 1
TAIR|locus:2206320 - symbol:AGL23 "AGAMOUS-like 23" speci... 108 0.00010 1
TAIR|locus:2184118 - symbol:FLC "FLOWERING LOCUS C" speci... 106 0.00013 1
UNIPROTKB|D2T2F8 - symbol:grcd4 "GRCD4 protein" species:1... 108 0.00013 1
UNIPROTKB|Q9ATF2 - symbol:FBP5 "MADS-box transcription fa... 107 0.00017 1
TAIR|locus:2102871 - symbol:AGL79 "AGAMOUS-like 79" speci... 107 0.00018 1
UNIPROTKB|D2T2G0 - symbol:gsqua2 "GSQUA2 protein" species... 102 0.00018 2
TAIR|locus:2143261 - symbol:SEP1 "SEPALLATA1" species:370... 107 0.00020 1
UNIPROTKB|Q9ZS27 - symbol:gdef2 "MADS-box protein, GDEF2"... 106 0.00021 1
UNIPROTKB|Q9ATE5 - symbol:FBP24 "MADS-box protein FBP24" ... 107 0.00021 1
SGD|S000006010 - symbol:RLM1 "MADS-box transcription fact... 111 0.00024 1
UNIPROTKB|Q10CQ1 - symbol:MADS14 "MADS-box transcription ... 106 0.00025 1
UNIPROTKB|Q6EUV7 - symbol:grcd2 "MADS domain protein" spe... 106 0.00025 1
UNIPROTKB|Q7XUN2 - symbol:MADS17 "MADS-box transcription ... 106 0.00026 1
TAIR|locus:4010713489 - symbol:AGL64 "AGAMOUS-like 64" sp... 103 0.00028 1
SGD|S000000386 - symbol:SMP1 "Putative transcription fact... 109 0.00028 1
TAIR|locus:2041233 - symbol:SVP "AT2G22540" species:3702 ... 105 0.00032 1
UNIPROTKB|Q0D4T4 - symbol:MADS18 "MADS-box transcription ... 97 0.00033 2
TAIR|locus:2144387 - symbol:AGL101 "AGAMOUS-like 101" spe... 89 0.00034 1
TAIR|locus:2202715 - symbol:AGL49 "AGAMOUS-like 49" speci... 106 0.00034 1
UNIPROTKB|Q0J466 - symbol:MADS7 "MADS-box transcription f... 105 0.00035 1
TAIR|locus:4515103623 - symbol:AT5G27944 species:3702 "Ar... 104 0.00039 1
UNIPROTKB|Q9ATF1 - symbol:FBP9 "MADS-box transcription fa... 104 0.00048 1
TAIR|locus:2029411 - symbol:AGL67 "AGAMOUS-like 67" speci... 104 0.00052 1
TAIR|locus:2121070 - symbol:AGL21 "AT4G37940" species:370... 103 0.00054 1
DICTYBASE|DDB_G0282835 - symbol:srfB "putative MADS-box t... 107 0.00055 1
ASPGD|ASPL0000034782 - symbol:rlmA species:162425 "Emeric... 108 0.00058 1
UNIPROTKB|Q6Q9I2 - symbol:MADS15 "MADS-box transcription ... 104 0.00058 1
UNIPROTKB|Q03414 - symbol:mef2a "Myocyte-specific enhance... 100 0.00059 2
TAIR|locus:2030621 - symbol:AGL104 "AGAMOUS-like 104" spe... 105 0.00063 1
TAIR|locus:2025951 - symbol:AGL50 "AGAMOUS-like 50" speci... 104 0.00066 1
TAIR|locus:2144345 - symbol:MAF3 "MADS AFFECTING FLOWERIN... 101 0.00067 1
TAIR|locus:2032372 - symbol:SEP3 "SEPALLATA3" species:370... 103 0.00069 1
TAIR|locus:2143646 - symbol:AGL89 "AGAMOUS-like 89" speci... 102 0.00069 1
TAIR|locus:2082618 - symbol:AGL16 "AGAMOUS-like 16" speci... 96 0.00078 2
UNIPROTKB|Q0DEB8 - symbol:MADS5 "MADS-box transcription f... 95 0.00086 2
TAIR|locus:2025386 - symbol:AGL28 "AGAMOUS-like 28" speci... 102 0.00089 1
TAIR|locus:2043600 - symbol:AGL6 "AT2G45650" species:3702... 102 0.00093 1
TAIR|locus:2193922 - symbol:AT1G72350 species:3702 "Arabi... 101 0.00099 1
>TAIR|locus:2152511 [details] [associations]
symbol:AGL80 "AGAMOUS-like 80" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0043078 "polar nucleus" evidence=IDA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0019722 "calcium-mediated signaling" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:P11831 eggNOG:NOG305032 GO:GO:0043078
EMBL:DQ406752 EMBL:AB015468 EMBL:DQ056710 IPI:IPI00518731
RefSeq:NP_199678.1 UniGene:At.62436 ProteinModelPortal:Q9FJK3
SMR:Q9FJK3 IntAct:Q9FJK3 STRING:Q9FJK3 PRIDE:Q9FJK3
EnsemblPlants:AT5G48670.1 GeneID:834925 KEGG:ath:AT5G48670
GeneFarm:3747 TAIR:At5g48670 HOGENOM:HOG000033845 InParanoid:Q9FJK3
OMA:FMEMMNH PhylomeDB:Q9FJK3 Genevestigator:Q9FJK3 Uniprot:Q9FJK3
Length = 321
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 61/130 (46%), Positives = 88/130 (67%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R++V+ IS +S RK TFKKR+ GL KK+ EL+TLCG+TACAII + +D PE+WPS
Sbjct: 1 MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMFTQ 119
+ RV+ +F P + K M++Q FL ++I+ E +R++RK +R LEM ++MF Q
Sbjct: 61 NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMF-Q 119
Query: 120 CLAGKDMNNF 129
CL G +M F
Sbjct: 120 CLIG-NMEMF 128
>TAIR|locus:2009457 [details] [associations]
symbol:AGL87 "AGAMOUS-like 87" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000006067 EMBL:AY141250 IPI:IPI00548453
RefSeq:NP_973886.1 UniGene:At.41592 ProteinModelPortal:Q7X9H1
SMR:Q7X9H1 IntAct:Q7X9H1 STRING:Q7X9H1 EnsemblPlants:AT1G22590.2
GeneID:838865 KEGG:ath:AT1G22590 TAIR:At1g22590 eggNOG:NOG317230
InParanoid:Q7X9H1 OMA:CGVIACA PhylomeDB:Q7X9H1
ProtClustDB:CLSN2687914 ArrayExpress:Q7X9H1 Genevestigator:Q7X9H1
Uniprot:Q7X9H1
Length = 163
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 58/161 (36%), Positives = 96/161 (59%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGRR+V H+LIS + R+VTF+KR+ GL KK+ ELT LCG+ ACAII + + PE+WP+
Sbjct: 1 MGRRKVTHQLISDNATRRVTFRKRKDGLLKKIYELTVLCGLPACAIIYSEYKDGPELWPN 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
E +L++ + P++++ KYMM+Q ++K I + +++ KE+ R +++ LM
Sbjct: 61 LNEVRSILNRLSELPVEKQTKYMMDQKDLMNKMIQDAEKKLEKEKMHTRAMKLGLM---- 116
Query: 121 LAGKD--MNNFDCXXXXXXXXXXXXXXIKVIADKIEC-EMG 158
AG + + + DC +K I ++I+ E G
Sbjct: 117 -AGSNDLITDTDCSEELARAADVVDKKLKAIRERIKAVEAG 156
>TAIR|locus:2146774 [details] [associations]
symbol:AT5G26630 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831 HOGENOM:HOG000006067
EMBL:AY141246 IPI:IPI00528388 RefSeq:NP_850882.2 UniGene:At.47101
ProteinModelPortal:Q7XJK7 SMR:Q7XJK7 PRIDE:Q7XJK7
EnsemblPlants:AT5G26630.1 GeneID:832726 KEGG:ath:AT5G26630
TAIR:At5g26630 InParanoid:Q7XJK7 OMA:IDACAII PhylomeDB:Q7XJK7
ArrayExpress:Q7XJK7 Genevestigator:Q7XJK7 Uniprot:Q7XJK7
Length = 218
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/127 (40%), Positives = 80/127 (62%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R++V+ I E+ RK TFKKR+ GL KK EL LCGV A++ + ++ PE+WPS
Sbjct: 1 MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMFTQ 119
A +V+ ++ + + K M+NQ TFL ++I+ E +K RK+N+ LEM ++MF
Sbjct: 61 REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMF-D 119
Query: 120 CLAGKDM 126
CL+GK +
Sbjct: 120 CLSGKTL 126
>TAIR|locus:2206280 [details] [associations]
symbol:PHE1 "PHERES1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;NAS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0090406
"pollen tube" evidence=IDA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004512 GO:GO:0009793
SUPFAM:SSF55455 HOGENOM:HOG000006067 eggNOG:KOG0014 GO:GO:0090406
EMBL:AF528574 EMBL:AF528575 EMBL:AF528576 EMBL:AF528577
EMBL:AF528578 EMBL:AF528579 EMBL:AF528580 EMBL:AF528581
EMBL:AF528582 IPI:IPI00530403 PIR:T02356 RefSeq:NP_176712.1
UniGene:At.64882 ProteinModelPortal:O80805 SMR:O80805 IntAct:O80805
STRING:O80805 EnsemblPlants:AT1G65330.1 GeneID:842841
KEGG:ath:AT1G65330 GeneFarm:3737 TAIR:At1g65330 InParanoid:O80805
PhylomeDB:O80805 ProtClustDB:CLSN2679617 ArrayExpress:O80805
Genevestigator:O80805 GermOnline:AT1G65330 Uniprot:O80805
Length = 279
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 53/123 (43%), Positives = 77/123 (62%)
Query: 3 RRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPA 62
R +++ I +SVRK TF KR+ G+ KK +EL TLCGV ACA+I + ++ E WPS
Sbjct: 2 RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61
Query: 63 EAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMFTQCL 121
V+ KF F + R K M++Q TFL ++I+ ER++K R +NR ++ DLMF CL
Sbjct: 62 GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFG-CL 120
Query: 122 AGK 124
G+
Sbjct: 121 KGE 123
>TAIR|locus:2206325 [details] [associations]
symbol:AGL38 "AGAMOUS-like 38" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004512
SUPFAM:SSF55455 HOGENOM:HOG000006067 eggNOG:KOG0014
ProtClustDB:CLSN2679617 EMBL:AY141245 IPI:IPI00527515 PIR:T02353
RefSeq:NP_176709.2 UniGene:At.35902 ProteinModelPortal:Q7XJK8
SMR:Q7XJK8 IntAct:Q7XJK8 STRING:Q7XJK8 EnsemblPlants:AT1G65300.1
GeneID:842838 KEGG:ath:AT1G65300 GeneFarm:3736 TAIR:At1g65300
InParanoid:Q7XJK8 PhylomeDB:Q7XJK8 Genevestigator:Q7XJK8
GermOnline:AT1G65300 Uniprot:Q7XJK8
Length = 278
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 52/130 (40%), Positives = 81/130 (62%)
Query: 3 RRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPA 62
+R+++ LI RK TF KR+ G+ KKL+EL TLCGV ACA++ + F+ PE WPS
Sbjct: 2 KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61
Query: 63 EAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMFTQCL 121
V+ KF + R K M++Q TF+S++I+ E+++K R +N ++ +LMF CL
Sbjct: 62 GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFG-CL 120
Query: 122 AGK-DMNNFD 130
G+ ++ N D
Sbjct: 121 KGETNVYNLD 130
>TAIR|locus:2146794 [details] [associations]
symbol:AGL36 "AGAMOUS-like 36" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AY141247 EMBL:AF058914 IPI:IPI00530333 PIR:T01195
RefSeq:NP_850880.2 UniGene:At.49065 HSSP:P11831
ProteinModelPortal:Q7XJK6 SMR:Q7XJK6 IntAct:Q7XJK6 STRING:Q7XJK6
EnsemblPlants:AT5G26650.1 GeneID:832724 KEGG:ath:AT5G26650
GeneFarm:3745 TAIR:At5g26650 eggNOG:NOG305032 HOGENOM:HOG000006067
InParanoid:Q7XJK6 PhylomeDB:Q7XJK6 ProtClustDB:CLSN2681071
Genevestigator:Q7XJK6 Uniprot:Q7XJK6
Length = 366
Score = 230 (86.0 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 49/121 (40%), Positives = 73/121 (60%)
Query: 4 RRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAE 63
++V+ LI+ E RK +F KR+ G+ KKL EL+TLCGV ACA+I + F PE WPS
Sbjct: 2 KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61
Query: 64 AVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLAG 123
A +V +F P R K MM+Q T+L ++I+ E+++ +NR L++ C+ G
Sbjct: 62 AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121
Query: 124 K 124
K
Sbjct: 122 K 122
>TAIR|locus:2143769 [details] [associations]
symbol:AGL90 "AGAMOUS-like 90" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:P11831 HOGENOM:HOG000006067 ProtClustDB:CLSN2681071
EMBL:AY141249 EMBL:AC007627 IPI:IPI00543875 RefSeq:NP_198148.2
UniGene:At.30775 ProteinModelPortal:Q7XJK5 SMR:Q7XJK5 IntAct:Q7XJK5
STRING:Q7XJK5 EnsemblPlants:AT5G27960.1 GeneID:832865
KEGG:ath:AT5G27960 GeneFarm:3746 TAIR:At5g27960 eggNOG:KOG0014
InParanoid:Q7XJK5 PhylomeDB:Q7XJK5 Genevestigator:Q7XJK5
Uniprot:Q7XJK5
Length = 320
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 49/121 (40%), Positives = 72/121 (59%)
Query: 4 RRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAE 63
++V+ LI+ E RK +F KR+ G+ KKL EL+TLCGV ACA+I + F PE WPS
Sbjct: 2 KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61
Query: 64 AVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLAG 123
A +V KF P R + MM+Q T L ++I+ E+++ +NR L++ C+ G
Sbjct: 62 AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121
Query: 124 K 124
K
Sbjct: 122 K 122
>TAIR|locus:2074494 [details] [associations]
symbol:AT3G05860 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 IPI:IPI00528805 RefSeq:NP_187237.2
UniGene:At.40604 ProteinModelPortal:F4J9K3 SMR:F4J9K3
EnsemblPlants:AT3G05860.1 GeneID:819755 KEGG:ath:AT3G05860
ArrayExpress:F4J9K3 Uniprot:F4J9K3
Length = 260
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 48/125 (38%), Positives = 72/125 (57%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R+++ I+ ES+RK TF KR+ GL KK+ EL+ LCG+ ACA+I + F+ PE+WPS
Sbjct: 1 MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMFTQ 119
+E V++ F + K M++ F+ + IS E K+ N M + MF Q
Sbjct: 61 NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMF-Q 119
Query: 120 CLAGK 124
L+GK
Sbjct: 120 LLSGK 124
>TAIR|locus:2028601 [details] [associations]
symbol:AGL86 "AGAMOUS-like 86" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC074360
SUPFAM:SSF55455 HSSP:P11831 eggNOG:NOG305032 HOGENOM:HOG000006067
EMBL:DQ056473 IPI:IPI00523646 RefSeq:NP_174444.1 UniGene:At.62375
ProteinModelPortal:Q9C6V3 SMR:Q9C6V3 IntAct:Q9C6V3 STRING:Q9C6V3
EnsemblPlants:AT1G31630.1 GeneID:840050 KEGG:ath:AT1G31630
GeneFarm:3734 TAIR:At1g31630 InParanoid:Q9C6V3 PhylomeDB:Q9C6V3
ProtClustDB:CLSN2682565 Genevestigator:Q9C6V3 Uniprot:Q9C6V3
Length = 339
Score = 221 (82.9 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 42/122 (34%), Positives = 71/122 (58%)
Query: 3 RRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPA 62
R +++ LI+ ++ R+ TF+KR+ G+ KL ELTTLCGV ACA+I + +++ P +WPS
Sbjct: 2 RSKIKLSLIANKTSRRTTFRKRKGGITNKLHELTTLCGVKACAVISSPYEN-PVVWPSTE 60
Query: 63 EAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLA 122
+ F P + K MM+ T+L KI+ +++ R++NR ++ C+
Sbjct: 61 GVQEAVSMFMERPATEQSKLMMSHETYLQDKITKETKKLESLRRENRESQLRQFMFDCVE 120
Query: 123 GK 124
GK
Sbjct: 121 GK 122
>TAIR|locus:2028591 [details] [associations]
symbol:AGL92 "AGAMOUS-like 92" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC074360
SUPFAM:SSF55455 HOGENOM:HOG000006067 ProtClustDB:CLSN2682565
eggNOG:KOG0014 IPI:IPI00520679 RefSeq:NP_174445.1 UniGene:At.51860
ProteinModelPortal:Q9C6V4 SMR:Q9C6V4 IntAct:Q9C6V4 STRING:Q9C6V4
EnsemblPlants:AT1G31640.1 GeneID:840051 KEGG:ath:AT1G31640
GeneFarm:3735 TAIR:At1g31640 InParanoid:Q9C6V4 PhylomeDB:Q9C6V4
Genevestigator:Q9C6V4 Uniprot:Q9C6V4
Length = 464
Score = 224 (83.9 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 45/122 (36%), Positives = 69/122 (56%)
Query: 3 RRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPA 62
R + + LI R+ TF+KR AG++KKL ELTTLC + ACA+I + F++ P +WPS
Sbjct: 2 RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFEN-PTVWPSTE 60
Query: 63 EAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLA 122
V+ +F P R K MM+ TFL +I+ ++ R++NR ++ C+
Sbjct: 61 GVQEVISEFMEKPATERSKTMMSHETFLRDQITKEQNKLESLRRENRETQLKHFMFDCVG 120
Query: 123 GK 124
GK
Sbjct: 121 GK 122
>TAIR|locus:2180300 [details] [associations]
symbol:AT5G27810 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 eggNOG:NOG305032
EMBL:AC069556 EMBL:BT030070 IPI:IPI00532182 RefSeq:NP_198133.1
UniGene:At.55043 ProteinModelPortal:Q3E8Z9 SMR:Q3E8Z9 STRING:Q3E8Z9
EnsemblPlants:AT5G27810.1 GeneID:832843 KEGG:ath:AT5G27810
TAIR:At5g27810 PhylomeDB:Q3E8Z9 Genevestigator:Q3E8Z9
Uniprot:Q3E8Z9
Length = 119
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 41/95 (43%), Positives = 64/95 (67%)
Query: 30 KKLSELTTLCGVTACAIICASFDHQPEIWPSPAEAVRVLDKFNNFPIKRRGKYMMNQNTF 89
KK+ EL+TLCG+T+CAII + +D E+WPS + RV+ +F P + K M++Q F
Sbjct: 2 KKVHELSTLCGITSCAIIYSPYDTSHEVWPSNSGVQRVVSEFRTLPEMDQHKKMVDQEGF 61
Query: 90 LSKKISNLFERMRKERKKNRGLEM-DLMFTQCLAG 123
L ++I+ E +R++RK N+ LEM ++MF +CL G
Sbjct: 62 LKQRIAKPTENLRRQRKDNKELEMTEVMF-RCLIG 95
>TAIR|locus:2054543 [details] [associations]
symbol:AGL46 "AGAMOUS-like 46" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 UniGene:At.38580 IPI:IPI00533027 RefSeq:NP_180438.2
ProteinModelPortal:F4IIT6 SMR:F4IIT6 EnsemblPlants:AT2G28700.1
GeneID:817419 KEGG:ath:AT2G28700 Uniprot:F4IIT6
Length = 329
Score = 198 (74.8 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 43/130 (33%), Positives = 76/130 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R+++ I + +RK +FK+RR G KKL++L LC V ACA++ F+ P++WPS
Sbjct: 1 MARKKLNLTYIFNDRMRKRSFKQRREGFLKKLNDLKVLCDVNACAVVYNPFNSNPDVWPS 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMFTQ 119
+E ++ KF P ++ +N FL+ IS + ++ +K +N+ + ++MF +
Sbjct: 61 KSEVNNIIKKFEMLPETQKKVKSVNHEEFLNLYISKVEKQSKKLIVENKETCLKEVMF-K 119
Query: 120 CLAGKDMNNF 129
CL G +M +F
Sbjct: 120 CLGG-NMGDF 128
>TAIR|locus:2065092 [details] [associations]
symbol:AGL48 "AGAMOUS-like 48" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 SUPFAM:SSF55455
ProtClustDB:CLSN2683395 eggNOG:NOG240745 IPI:IPI00543205 PIR:F84826
RefSeq:NP_181550.1 UniGene:At.64970 ProteinModelPortal:Q9XEF1
SMR:Q9XEF1 IntAct:Q9XEF1 STRING:Q9XEF1 EnsemblPlants:AT2G40210.1
GeneID:818613 KEGG:ath:AT2G40210 TAIR:At2g40210
HOGENOM:HOG000153847 InParanoid:Q9XEF1 PhylomeDB:Q9XEF1
ArrayExpress:Q9XEF1 Genevestigator:Q9XEF1 Uniprot:Q9XEF1
Length = 371
Score = 179 (68.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 41/126 (32%), Positives = 67/126 (53%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R++V+ I + R + +K R GL KK+ ELT LC V A II + P +WPS
Sbjct: 1 MTRKKVKLVWIENDKSRATSLQKMRVGLLKKVKELTILCAVRAIVIIFSPDKVGPLVWPS 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
P +LD+F P + K N ++L +K E+++K +KKN+ +D + Q
Sbjct: 61 PQATHGLLDEFFALPKSVQKKKESNVESYLKEKTHKFQEQLKKSKKKNKEHVIDELMMQL 120
Query: 121 LAGKDM 126
+G+++
Sbjct: 121 QSGREI 126
>TAIR|locus:2146809 [details] [associations]
symbol:AGL34 "AGAMOUS-like-34" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831 HOGENOM:HOG000006067
ProtClustDB:CLSN2681071 EMBL:AY141248 IPI:IPI00521650
RefSeq:NP_850888.2 UniGene:At.64249 ProteinModelPortal:Q7X9H2
SMR:Q7X9H2 EnsemblPlants:AT5G26580.1 GeneID:832732
KEGG:ath:AT5G26580 TAIR:At5g26580 InParanoid:Q7X9H2
PhylomeDB:Q7X9H2 Genevestigator:Q7X9H2 Uniprot:Q7X9H2
Length = 345
Score = 160 (61.4 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 44/124 (35%), Positives = 67/124 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MG ++V+ LI+ E R+ +F KR+ G+ KKL EL+TLCGV AC +I + F PE
Sbjct: 1 MGMKKVKLSLIANEISRETSFMKRKNGIMKKLYELSTLCGVQACTLIYSPFIPVPEF--- 57
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
L+ P R K MMNQ T+L ++I+ E+++ N+ L++ C
Sbjct: 58 -------LEMS---PTARTRK-MMNQETYLMERITKAKEQLQNLVGANQELQVRRFMFDC 106
Query: 121 LAGK 124
+ GK
Sbjct: 107 VEGK 110
>TAIR|locus:2144098 [details] [associations]
symbol:AGL96 "AGAMOUS-like 96" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AP002543 SUPFAM:SSF55455
HSSP:Q02078 eggNOG:KOG0014 EMBL:DQ056672 IPI:IPI00540511
RefSeq:NP_196268.1 UniGene:At.54747 ProteinModelPortal:Q9FG20
IntAct:Q9FG20 STRING:Q9FG20 EnsemblPlants:AT5G06500.1 GeneID:830538
KEGG:ath:AT5G06500 TAIR:At5g06500 InParanoid:Q9FG20
PhylomeDB:Q9FG20 Genevestigator:Q9FG20 Uniprot:Q9FG20
Length = 242
Score = 146 (56.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/126 (26%), Positives = 63/126 (50%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R++V+ I + +R+ + K+R GL KK++EL+ LC + A ++ + Q WPS
Sbjct: 1 MARKKVRAAWIRDDRMRRASLKRRLTGLIKKVNELSILCDMRASVVVFNREEEQLTAWPS 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
P A ++D F + R ++ +++ I + ++ RK EMD + Q
Sbjct: 61 PEAANSLIDNFYSLTDHERTMKAVDPESYVQTVIEKIEKKRADTRKVITEFEMDELMFQV 120
Query: 121 LAGKDM 126
G+++
Sbjct: 121 QNGREL 126
>TAIR|locus:2047304 [details] [associations]
symbol:AGL61 "AGAMOUS-like 61" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009559 "embryo sac central cell
differentiation" evidence=IMP] [GO:0043078 "polar nucleus"
evidence=IDA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0019722 "calcium-mediated signaling"
evidence=RCA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC006585 EMBL:DQ056542
EMBL:EU836691 IPI:IPI00545091 PIR:B84641 RefSeq:NP_850058.1
UniGene:At.52900 ProteinModelPortal:Q4PSU4 SMR:Q4PSU4 IntAct:Q4PSU4
STRING:Q4PSU4 EnsemblPlants:AT2G24840.1 GeneID:817021
KEGG:ath:AT2G24840 GeneFarm:3717 TAIR:At2g24840 eggNOG:NOG244091
HOGENOM:HOG000238700 InParanoid:Q4PSU4 OMA:AASCELN PhylomeDB:Q4PSU4
ProtClustDB:CLSN2918089 ArrayExpress:Q4PSU4 Genevestigator:Q4PSU4
GO:GO:0043078 GO:GO:0009559 Uniprot:Q4PSU4
Length = 264
Score = 143 (55.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 40/117 (34%), Positives = 66/117 (56%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
+GR+++ I KES R+VTF KRRAGL KK SEL TLCG II S +P +
Sbjct: 62 IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEI-GIIVFSPAKKPFSFGH 120
Query: 61 PAEAVRVLDKF---NNFPIKRRGKYMMNQ--NTFLSKKISNLFERMRKERKKNRGLE 112
P+ VLD++ NN + + + + + L+ +++++ + +E+KK + +E
Sbjct: 121 PS-VESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAME 176
>TAIR|locus:2162137 [details] [associations]
symbol:AT5G55690 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:Q02078 EMBL:AB009050 EMBL:AY141214 EMBL:BT026042
IPI:IPI00516331 RefSeq:NP_200380.1 UniGene:At.64303
ProteinModelPortal:Q9FM69 SMR:Q9FM69 IntAct:Q9FM69
EnsemblPlants:AT5G55690.1 GeneID:835663 KEGG:ath:AT5G55690
TAIR:At5g55690 InParanoid:Q9FM69 PhylomeDB:Q9FM69
ProtClustDB:CLSN2916591 Genevestigator:Q9FM69 Uniprot:Q9FM69
Length = 277
Score = 142 (55.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICA---SFDH---Q 54
MGR+ V+ I+ E R T+KKR+A L KK SE +TLCGV C I+ + D +
Sbjct: 1 MGRKMVKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDEMVME 60
Query: 55 PEIWPSPAEAVR-VLDKFNN 73
PE+WP VR +L K+ +
Sbjct: 61 PELWPKDGSKVREILTKYRD 80
>TAIR|locus:2040819 [details] [associations]
symbol:AGL29 "AGAMOUS-like 29" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC004077
EMBL:AC004481 EMBL:DQ446598 IPI:IPI00526479 PIR:T02331
RefSeq:NP_180991.1 UniGene:At.37804 ProteinModelPortal:O64703
SMR:O64703 EnsemblPlants:AT2G34440.1 GeneID:818007
KEGG:ath:AT2G34440 TAIR:At2g34440 InParanoid:O64703 OMA:QASSCLM
PhylomeDB:O64703 ProtClustDB:CLSN2683539 ArrayExpress:O64703
Genevestigator:O64703 Uniprot:O64703
Length = 172
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 38/116 (32%), Positives = 62/116 (53%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS----FDH-QP 55
MGRR+++ E++ + R+VTF KRR GL KK SEL TLC ++ + F + +P
Sbjct: 1 MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60
Query: 56 EIWPSPAEA-VRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRG 110
+ S AE +R D ++ ++ G Y LS+++ L + + E +K RG
Sbjct: 61 NL-DSVAERFMREYDDSDSGDEEKSGNYRPKLKR-LSERLDLLNQEV--EAEKERG 112
>TAIR|locus:2033273 [details] [associations]
symbol:AP1 "AT1G69120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0009908 "flower development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0010076 "maintenance
of floral meristem identity" evidence=IGI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0009556 "microsporogenesis" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010093
"specification of floral organ identity" evidence=RCA] [GO:0048440
"carpel development" evidence=RCA] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0052543 "callose deposition in cell
wall" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC008262 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076
UniGene:At.10200 KO:K09264 GO:GO:0048830 GO:GO:0010093 EMBL:Z16421
EMBL:BT004113 EMBL:BT004951 EMBL:AK175933 EMBL:AY087956
EMBL:AF466771 EMBL:AF466772 EMBL:AF466773 EMBL:AF466774
EMBL:AF466775 EMBL:AF466776 EMBL:AF466777 EMBL:AF466778
EMBL:AF466779 EMBL:AF466780 EMBL:AF466781 EMBL:AF466782
EMBL:AF466783 EMBL:AF466784 EMBL:AF466785 IPI:IPI00543034
PIR:S27109 RefSeq:NP_177074.1 UniGene:At.24302
ProteinModelPortal:P35631 SMR:P35631 IntAct:P35631 STRING:P35631
EnsemblPlants:AT1G69120.1 GeneID:843244 KEGG:ath:AT1G69120
GeneFarm:3482 TAIR:At1g69120 InParanoid:P35631 OMA:LMYESIN
PhylomeDB:P35631 ProtClustDB:CLSN2682513 Genevestigator:P35631
GermOnline:AT1G69120 GO:GO:0009933 Uniprot:P35631
Length = 256
Score = 127 (49.8 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 38/135 (28%), Positives = 67/135 (49%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYMMNQ--NTFLSKKISNLFERMRK-ERKKNRGLEMDL 115
++ ++L+++ + R NT S + + L ++ ER + L DL
Sbjct: 58 STDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDL 117
Query: 116 MFTQCLAGKDMNNFD 130
Q ++ K++ N +
Sbjct: 118 ---QAMSPKELQNLE 129
>TAIR|locus:2149264 [details] [associations]
symbol:PI "PISTILLATA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048481 "ovule development" evidence=RCA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0009908 KO:K09264 EMBL:AF296825 EMBL:AB035137
EMBL:D30807 EMBL:AF115815 EMBL:AF115816 EMBL:AF115817 EMBL:AF115818
EMBL:AF115819 EMBL:AF115820 EMBL:AF115821 EMBL:AF115822
EMBL:AF115823 EMBL:AF115824 EMBL:AF115825 EMBL:AF115826
EMBL:AF115827 EMBL:AF115828 EMBL:AF115829 EMBL:AF115830
IPI:IPI00548531 PIR:A53839 RefSeq:NP_197524.1 UniGene:At.21403
ProteinModelPortal:P48007 SMR:P48007 IntAct:P48007 STRING:P48007
EnsemblPlants:AT5G20240.1 GeneID:832146 KEGG:ath:AT5G20240
GeneFarm:3488 TAIR:At5g20240 InParanoid:P48007 OMA:KMMEDEN
PhylomeDB:P48007 ProtClustDB:CLSN2687197 Genevestigator:P48007
GermOnline:AT5G20240 Uniprot:P48007
Length = 208
Score = 121 (47.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/130 (30%), Positives = 64/130 (49%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I + R VTF KRR GL KK E+T LC II AS +
Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
+ +LD++ K GK + + + +SN +R++KE N L+++L
Sbjct: 61 SMDLGAMLDQYQ----KLSGKKLWDAK---HENLSNEIDRIKKE---NDSLQLELRH--- 107
Query: 121 LAGKDMNNFD 130
L G+D+ + +
Sbjct: 108 LKGEDIQSLN 117
>TAIR|locus:2103415 [details] [associations]
symbol:AGL91 "AGAMOUS-like 91" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC036106 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 HOGENOM:HOG000238700
ProtClustDB:CLSN2683539 EMBL:DQ056634 IPI:IPI00548671
RefSeq:NP_187320.1 UniGene:At.64985 ProteinModelPortal:Q9C836
SMR:Q9C836 EnsemblPlants:AT3G66656.1 GeneID:819848
KEGG:ath:AT3G66656 TAIR:At3g66656 InParanoid:Q9C836 OMA:QEKKICK
PhylomeDB:Q9C836 Genevestigator:Q9C836 Uniprot:Q9C836
Length = 178
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGRR+++ E + + ++VTF KRR GL KK SEL TLC I+ S ++P +
Sbjct: 1 MGRRKIKMEKVQDTNTKQVTFSKRRLGLFKKASELATLCNAEV-GIVVFSPGNKPYSFGK 59
Query: 61 PAEAVRVLDKFNN 73
P V + ++F N
Sbjct: 60 PNFDV-IAERFKN 71
>TAIR|locus:2053608 [details] [associations]
symbol:AGL95 "AGAMOUS-like 95" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
SMART:SM00432 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AY649246 IPI:IPI00526931 RefSeq:NP_179168.2 UniGene:At.49339
ProteinModelPortal:Q6DR69 EnsemblPlants:AT2G15660.1 GeneID:816059
KEGG:ath:AT2G15660 TAIR:At2g15660 eggNOG:NOG240745
InParanoid:Q6DR69 PhylomeDB:Q6DR69 Genevestigator:Q6DR69
Uniprot:Q6DR69
Length = 250
Score = 122 (48.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 28/114 (24%), Positives = 55/114 (48%)
Query: 17 RKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAEAVRVLDKFNNFPI 76
+K+ K K + + LC V AC I+ + + +P +WPS +A +LD F P
Sbjct: 10 KKIEENKGMVNEKGRRTNYIILCAVKACIIMFSPHEVEPMVWPSFEKARDLLDGFFALPD 69
Query: 77 KRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLAGKDMNNFD 130
++ K M+ +L +K + E+ K ++K+ D + + G+ +++ D
Sbjct: 70 IKKKKKQMSLEMYLKEKTKKVHEQFMKTQRKHMDHVTDQLMVELHRGRRLDDLD 123
>UNIPROTKB|Q03378 [details] [associations]
symbol:GLO "Floral homeotic protein GLOBOSA" species:4151
"Antirrhinum majus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0007275 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:X68831 PIR:S28062
ProteinModelPortal:Q03378 IntAct:Q03378 Uniprot:Q03378
Length = 215
Score = 119 (46.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I S R+VT+ KRR G+ KK E++ LC II AS E
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
V +LD ++ K GK + + + + N R++KE N ++++L
Sbjct: 61 STTLVDMLDHYH----KLSGKRLWDPK---HEHLDNEINRVKKE---NDSMQIELRH--- 107
Query: 121 LAGKDMNNFD 130
L G+D+ +
Sbjct: 108 LKGEDITTLN 117
>TAIR|locus:2154588 [details] [associations]
symbol:AGL82 "AGAMOUS-like 82" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:AB016885
EMBL:AB493798 IPI:IPI00527002 RefSeq:NP_200697.1 UniGene:At.55618
HSSP:Q02080 ProteinModelPortal:Q9FIM0 SMR:Q9FIM0 IntAct:Q9FIM0
STRING:Q9FIM0 EnsemblPlants:AT5G58890.1 GeneID:836006
KEGG:ath:AT5G58890 TAIR:At5g58890 eggNOG:NOG301723
HOGENOM:HOG000152489 InParanoid:Q9FIM0 OMA:ANDKTRI PhylomeDB:Q9FIM0
ProtClustDB:CLSN2914845 Genevestigator:Q9FIM0 Uniprot:Q9FIM0
Length = 294
Score = 122 (48.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 35/109 (32%), Positives = 55/109 (50%)
Query: 6 VQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICA---SFD---HQPEIWP 59
V + I+ + R T+KKR+A L KK E +TLCGV C I+ + D +PEIWP
Sbjct: 6 VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWP 65
Query: 60 SPAEAVR-VLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKK 107
VR ++ K+ + + + N TF++ + E + K+R K
Sbjct: 66 KDETKVRAIIRKYKD-TVSTSCRKETNVETFVND-VGKGNEVVTKKRVK 112
>TAIR|locus:2028830 [details] [associations]
symbol:CAL "CAULIFLOWER" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009911 "positive regulation of flower
development" evidence=TAS] [GO:0010582 "floral meristem
determinacy" evidence=IEP] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0010582 KO:K09264
GO:GO:0048830 GO:GO:0010093 ProtClustDB:CLSN2682513 EMBL:L36925
EMBL:AB493477 EMBL:AF061401 EMBL:AF061402 EMBL:AF061403
EMBL:AF061404 EMBL:AF061405 EMBL:AF061406 EMBL:AF061407
EMBL:AF061408 EMBL:AF061409 EMBL:AF061410 EMBL:AF061411
EMBL:AF061412 EMBL:AF061413 EMBL:AF061414 EMBL:AF061415
IPI:IPI00538144 PIR:E86389 RefSeq:NP_564243.1 UniGene:At.41269
ProteinModelPortal:Q39081 SMR:Q39081 IntAct:Q39081 STRING:Q39081
EnsemblPlants:AT1G26310.1 GeneID:839172 KEGG:ath:AT1G26310
GeneFarm:3483 TAIR:At1g26310 InParanoid:Q39081 OMA:ESEGNWC
PhylomeDB:Q39081 Genevestigator:Q39081 GermOnline:AT1G26310
Uniprot:Q39081
Length = 255
Score = 119 (46.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRR GL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYM----MNQNTFLSKKISNLFERMRK-ERKKNRGLEM 113
+E+ +VL+++ + R +N T S + S L ++ ER + L
Sbjct: 58 SSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGE 117
Query: 114 DLMFTQCLAGKDMNNFD 130
+L + ++ KD+ N +
Sbjct: 118 EL---EPMSLKDLQNLE 131
>DICTYBASE|DDB_G0281387 [details] [associations]
symbol:srfA "SRF-related protein" species:44689
"Dictyostelium discoideum" [GO:0042244 "spore wall assembly"
evidence=IMP] [GO:0031289 "actin phosphorylation" evidence=IMP]
[GO:0031247 "actin rod assembly" evidence=IMP] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS;IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
dictyBase:DDB_G0281387 GO:GO:0005634 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0040011 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 EMBL:AAFI02000041 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:P11831 GO:GO:0031154 GO:GO:0042244 GO:GO:0031247 KO:K12412
GO:GO:0031289 EMBL:AJ224893 RefSeq:XP_640674.1
ProteinModelPortal:Q54TY7 SMR:Q54TY7 STRING:Q54TY7
EnsemblProtists:DDB0214892 GeneID:8623058 KEGG:ddi:DDB_G0281387
OMA:ASPNQFN ProtClustDB:CLSZ2430546 Uniprot:Q54TY7
Length = 418
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDH-----QPE 56
GRR+++ E I +S R +TF KR+AG+ KK EL+TL G ++ + H +
Sbjct: 68 GRRKIKIEFIDDKSRRHITFSKRKAGIMKKAYELSTLTGTQVLLLVASETGHVYTFATAK 127
Query: 57 IWP--SPAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKER 105
+ P + E ++ N P M NQN S SNL ++ ++++
Sbjct: 128 LQPLITRPEGKNLIQSCLNTPDNPNSPSMANQN---SNNNSNLLQQQQQQQ 175
>TAIR|locus:2044259 [details] [associations]
symbol:SEP4 "SEPALLATA 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010076 "maintenance of floral meristem identity"
evidence=IMP] [GO:0048440 "carpel development" evidence=RCA;IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048443 "stamen development"
evidence=IMP] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048443 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0010076 EMBL:U81369 EMBL:AY141229
EMBL:AC006836 EMBL:AY063894 EMBL:AY096386 IPI:IPI00517975
IPI:IPI00518345 IPI:IPI00527847 PIR:S57793 RefSeq:NP_178466.1
RefSeq:NP_849930.1 RefSeq:NP_973411.1 UniGene:At.10200
ProteinModelPortal:P29383 SMR:P29383 IntAct:P29383 STRING:P29383
EnsemblPlants:AT2G03710.1 GeneID:814898 KEGG:ath:AT2G03710
GeneFarm:3499 TAIR:At2g03710 InParanoid:P29383 OMA:EIALLIF
PhylomeDB:P29383 ProtClustDB:CLSN2683849 Genevestigator:P29383
GO:GO:0048440 GO:GO:0048441 GO:GO:0048442 Uniprot:P29383
Length = 258
Score = 112 (44.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +V+ + I + R+VTF KRR GL KK EL+ LC +I ++ E S
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 61 PAEAVRVLDKF 71
P+ R +DK+
Sbjct: 61 PSGMARTVDKY 71
Score = 35 (17.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 79 RGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLAG 123
+ + M++Q + L K L E R R+K + D TQ G
Sbjct: 143 KARSMLDQLSDLKTKEEMLLETNRDLRRKLE--DSDAALTQSFWG 185
>UNIPROTKB|Q9ZS26 [details] [associations]
symbol:gglo1 "MADS-box protein, GGLO1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009726 ProteinModelPortal:Q9ZS26 IntAct:Q9ZS26
Uniprot:Q9ZS26
Length = 197
Score = 114 (45.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 32/130 (24%), Positives = 60/130 (46%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I S R+VT+ KR+ G+ KK E+T LC +I S E
Sbjct: 1 MGRGKIEIKRIENTSNRQVTYSKRKNGIIKKAKEITVLCDANVSLVIYGSSGKMYEYCSP 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
+ +LD++ ++ N K NL + + +K+N ++++L
Sbjct: 61 KTNLIDMLDRYQR----------LSGNKLWDAKHENLQNEIDRIKKENESMQIELRH--- 107
Query: 121 LAGKDMNNFD 130
L G+D+ + +
Sbjct: 108 LKGEDITSLN 117
>UNIPROTKB|P23706 [details] [associations]
symbol:DEFA "Floral homeotic protein DEFICIENS"
species:4151 "Antirrhinum majus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0007275 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
EMBL:X52023 EMBL:X62810 PIR:S12378 ProteinModelPortal:P23706
IntAct:P23706 Uniprot:P23706
Length = 227
Score = 115 (45.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R ++Q + I ++ R+VT+ KRR GL KK EL+ LC I+ +S E + S
Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHE-YIS 59
Query: 61 PAEAVRVL-DKFNN-FPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMF 117
P A + L D++ + + L KK++ + +R+E ++ G + DL +
Sbjct: 60 PTTATKQLFDQYQKAVGVDLWSSHYEKMQEHL-KKLNEVNRNLRREIRQRMGESLNDLGY 118
Query: 118 TQCL-AGKDMNN 128
Q + +DM+N
Sbjct: 119 EQIVNLIEDMDN 130
>TAIR|locus:2175188 [details] [associations]
symbol:AGL62 "AGAMOUS-like 62" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009960 "endosperm
development" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000238700 EMBL:AY141236 EMBL:EU493093 EMBL:AB011483
IPI:IPI00517886 IPI:IPI00520610 RefSeq:NP_200852.1 UniGene:At.29160
ProteinModelPortal:Q9FKK2 SMR:Q9FKK2 IntAct:Q9FKK2 STRING:Q9FKK2
EnsemblPlants:AT5G60440.1 GeneID:836165 KEGG:ath:AT5G60440
GeneFarm:3728 TAIR:At5g60440 eggNOG:NOG311592 InParanoid:Q9FKK2
OMA:NISEYEH PhylomeDB:Q9FKK2 ProtClustDB:CLSN2916398
Genevestigator:Q9FKK2 GO:GO:0009960 Uniprot:Q9FKK2
Length = 299
Score = 116 (45.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSP 61
GR++++ + ES +VTF KRR+GL KK SEL TLCG AI+ S + + P
Sbjct: 7 GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEV-AIVVFSPGRKVFSFGHP 65
Query: 62 AEAVRVLDKF-NNFPIK------------RRGKYMMNQNTFLSKKISNLFERMRK--ERK 106
V+D+F NN P+ RR + + N L++ +S L +K E K
Sbjct: 66 -NVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELK 124
Query: 107 KNR 109
K R
Sbjct: 125 KIR 127
>TAIR|locus:2066050 [details] [associations]
symbol:AGL17 "AGAMOUS-like 17" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048578 "positive regulation of long-day
photoperiodism, flowering" evidence=IMP] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AC006340
EMBL:U20186 IPI:IPI00531185 PIR:H84614 RefSeq:NP_179848.1
UniGene:At.39413 ProteinModelPortal:Q38840 SMR:Q38840 IntAct:Q38840
STRING:Q38840 PRIDE:Q38840 EnsemblPlants:AT2G22630.1 GeneID:816794
KEGG:ath:AT2G22630 GeneFarm:3517 TAIR:At2g22630 InParanoid:Q38840
OMA:GHHELVD PhylomeDB:Q38840 ProtClustDB:CLSN2683748
ArrayExpress:Q38840 Genevestigator:Q38840 GermOnline:AT2G22630
GO:GO:0048578 Uniprot:Q38840
Length = 227
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR ++ + I + R+VTF KRR GL KK EL LC C II F + +++
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLII---FSNTDKLYDF 57
Query: 61 PAEAVR-VLDKFNNFPIKRRGKYMMN 85
+ +V+ +++FN K + +MN
Sbjct: 58 ASSSVKSTIERFNT--AKMEEQELMN 81
>TAIR|locus:2032537 [details] [associations]
symbol:AGL59 "AGAMOUS-like 59" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
HOGENOM:HOG000238700 eggNOG:KOG0014 EMBL:AC010155
ProtClustDB:CLSN2679626 IPI:IPI00522494 PIR:G86410
RefSeq:NP_174168.1 UniGene:At.51805 ProteinModelPortal:Q9SGP4
SMR:Q9SGP4 EnsemblPlants:AT1G28460.1 GeneID:839745
KEGG:ath:AT1G28460 TAIR:At1g28460 InParanoid:Q9SGP4 OMA:CEQAASR
PhylomeDB:Q9SGP4 Genevestigator:Q9SGP4 Uniprot:Q9SGP4
Length = 182
Score = 111 (44.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/108 (31%), Positives = 52/108 (48%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSP 61
G++++ + I K+ R VTF KR G+ K+SEL+ LCGV A I S +P + SP
Sbjct: 8 GKQKINIKKIEKDEGRSVTFSKRLNGIYTKISELSILCGVEV-AFIGYSCSGKPYTFGSP 66
Query: 62 AEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNL---FERMRKERK 106
+ V ++F N + N KI L + R+ +E K
Sbjct: 67 SFQA-VAERFLNGDASSSSSSSLVMNAHKQAKIQELCKKYNRLVEELK 113
>UNIPROTKB|F1RP31 [details] [associations]
symbol:MEF2D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000981 "sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0045944 GO:GO:0000981
GO:GO:0007512 SUPFAM:SSF55455 GO:GO:0001649 GO:GO:0002062
GO:GO:0000977 GO:GO:0001958 InterPro:IPR022102 Pfam:PF12347
GeneTree:ENSGT00390000011828 OMA:VTAWQQQ EMBL:CU633176
Ensembl:ENSSSCT00000007100 ArrayExpress:F1RP31 Uniprot:F1RP31
Length = 522
Score = 114 (45.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
Score = 34 (17.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 91 SKKISNLFERMRKERKKNRGLE 112
S+++ LF R KK+R E
Sbjct: 121 SEELDGLFRRYGALHKKHRECE 142
>UNIPROTKB|H0YKY6 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000559903 Bgee:H0YKY6 Uniprot:H0YKY6
Length = 77
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|H0YM62 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000560493 Bgee:H0YM62 Uniprot:H0YM62
Length = 85
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|I3L7L3 [details] [associations]
symbol:LOC100738718 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 GeneTree:ENSGT00390000011828
EMBL:CU618336 Ensembl:ENSSSCT00000024093 OMA:SMGRKKI Uniprot:I3L7L3
Length = 94
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|D6RB91 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 InterPro:IPR022102
Pfam:PF12347 EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996
ChiTaRS:MEF2C IPI:IPI00967652 ProteinModelPortal:D6RB91 SMR:D6RB91
Ensembl:ENST00000507984 HOGENOM:HOG000197845 ArrayExpress:D6RB91
Bgee:D6RB91 Uniprot:D6RB91
Length = 120
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSTNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|D6RCM6 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 HOGENOM:HOG000230620
EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C
IPI:IPI00964067 ProteinModelPortal:D6RCM6 SMR:D6RCM6
Ensembl:ENST00000502983 ArrayExpress:D6RCM6 Bgee:D6RCM6
Uniprot:D6RCM6
Length = 129
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSTNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|D6RG14 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000165 "MAPK cascade" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000987 "core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001046
"core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001782 "B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0007521 "muscle cell
fate determination" evidence=IEA] [GO:0007611 "learning or memory"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0010694 "positive regulation of alkaline
phosphatase activity" evidence=IEA] [GO:0014033 "neural crest cell
differentiation" evidence=IEA] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 GO:GO:0003211 GO:GO:0035984 GO:GO:2001013
GO:GO:0072102 GO:GO:0072160 GO:GO:0014033 GO:GO:0003138
GO:GO:0060297 GO:GO:0003185 GO:GO:0055012 EMBL:AC008525
EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C IPI:IPI00967981
ProteinModelPortal:D6RG14 SMR:D6RG14 Ensembl:ENST00000503075
ArrayExpress:D6RG14 Bgee:D6RG14 Uniprot:D6RG14
Length = 87
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSTNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|D6RG21 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 EMBL:AC008525
EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C IPI:IPI00968000
ProteinModelPortal:D6RG21 SMR:D6RG21 Ensembl:ENST00000508610
HOGENOM:HOG000213989 ArrayExpress:D6RG21 Bgee:D6RG21 Uniprot:D6RG21
Length = 126
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSTNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|D6RJA7 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007521
"muscle cell fate determination" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0010629 "negative regulation
of gene expression" evidence=IEA] [GO:0010694 "positive regulation
of alkaline phosphatase activity" evidence=IEA] [GO:0014033 "neural
crest cell differentiation" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0000165 "MAPK cascade"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001782
"B cell homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 HOGENOM:HOG000230620 GO:GO:0003211 GO:GO:0035984
GO:GO:2001013 GO:GO:0072102 GO:GO:0072160 GO:GO:0014033
GO:GO:0003138 GO:GO:0060297 GO:GO:0003185 GO:GO:0055012
EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C
IPI:IPI00964921 ProteinModelPortal:D6RJA7 SMR:D6RJA7
Ensembl:ENST00000502831 ArrayExpress:D6RJA7 Bgee:D6RJA7
Uniprot:D6RJA7
Length = 98
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSTNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>TAIR|locus:2173522 [details] [associations]
symbol:AGL8 "AGAMOUS-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009911 "positive regulation of flower development"
evidence=TAS] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IGI] [GO:0031540 "regulation of anthocyanin
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0010154 "fruit development" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010077
KO:K09264 EMBL:U33473 EMBL:AB008269 EMBL:AF386929 EMBL:AY072463
IPI:IPI00522952 PIR:S71208 RefSeq:NP_568929.1 UniGene:At.5426
ProteinModelPortal:Q38876 SMR:Q38876 IntAct:Q38876 STRING:Q38876
EnsemblPlants:AT5G60910.1 GeneID:836212 KEGG:ath:AT5G60910
GeneFarm:3484 TAIR:At5g60910 InParanoid:Q38876 OMA:DSCMERI
PhylomeDB:Q38876 ProtClustDB:CLSN2690058 Genevestigator:Q38876
GermOnline:AT5G60910 GO:GO:0048830 GO:GO:0010154 GO:GO:0010093
Uniprot:Q38876
Length = 242
Score = 112 (44.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRR+GL KK E++ LC I+ +S E + +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFE-YST 59
Query: 61 PAEAVRVLDKFNNFPIKRR---GKYM-MNQNTFLSK-KISNLFERMRKERKKNRGLEMD 114
+ R+L++++ + + G+ + ++N L K+ E + K ++ G ++D
Sbjct: 60 DSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLD 118
>TAIR|locus:2144355 [details] [associations]
symbol:MAF5 "MADS AFFECTING FLOWERING 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP;RCA] [GO:0043481 "anthocyanin accumulation in tissues
in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002688
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
GO:GO:0009910 GO:GO:0010048 ProtClustDB:CLSN2686365 EMBL:BT025268
EMBL:AK175180 IPI:IPI00523683 RefSeq:NP_201313.2 UniGene:At.28687
ProteinModelPortal:Q683D7 SMR:Q683D7 STRING:Q683D7
EnsemblPlants:AT5G65080.1 GeneID:836632 KEGG:ath:AT5G65080
TAIR:At5g65080 InParanoid:Q683D7 PhylomeDB:Q683D7
ArrayExpress:Q683D7 Genevestigator:Q683D7 Uniprot:Q683D7
Length = 205
Score = 110 (43.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS 50
MGRRRV+ + I +S R+VTF KRR GL +K +L+ LCG + I +S
Sbjct: 8 MGRRRVEIKRIENKSSRQVTFCKRRNGLMEKARQLSILCGSSVALFIVSS 57
>TAIR|locus:2202420 [details] [associations]
symbol:AGL102 "AGAMOUS-like 102" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 EMBL:AC012463 EMBL:AY141241
IPI:IPI00548327 RefSeq:NP_175207.1 UniGene:At.38560
ProteinModelPortal:Q9FZF2 SMR:Q9FZF2 IntAct:Q9FZF2 STRING:Q9FZF2
EnsemblPlants:AT1G47760.1 GeneID:841187 KEGG:ath:AT1G47760
TAIR:At1g47760 HOGENOM:HOG000152598 InParanoid:Q9FZF2 OMA:VVERIQN
PhylomeDB:Q9FZF2 ProtClustDB:CLSN2914527 Genevestigator:Q9FZF2
Uniprot:Q9FZF2
Length = 184
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGRR+++ + I RK TF +RR G+ KK EL LC V A++ S + P +
Sbjct: 1 MGRRKIEIKFIEDSIERKATFSRRRNGIFKKADELAKLCNVEI-AVLVISPTNIPYTYGY 59
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKN 108
P V+++ N + + +M + ++I E +RK++++N
Sbjct: 60 PCFN-DVVERIQNPSASSKLRSLMKE----LEQIKEFQEDLRKKQQRN 102
>UNIPROTKB|J9P151 [details] [associations]
symbol:MEF2D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 InterPro:IPR022102 Pfam:PF12347
GeneTree:ENSGT00390000011828 EMBL:AAEX03005319 EMBL:AAEX03005320
Ensembl:ENSCAFT00000048937 Uniprot:J9P151
Length = 501
Score = 114 (45.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|F1CYZ1 [details] [associations]
symbol:MEF2D "Myocyte enhancer factor 2D" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000981 "sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0045944 GO:GO:0000981
GO:GO:0007512 SUPFAM:SSF55455 GO:GO:0001649 GO:GO:0002062
GO:GO:0000977 GO:GO:0001958 InterPro:IPR022102 Pfam:PF12347
GeneTree:ENSGT00390000011828 CTD:4209 KO:K09262 OMA:VTAWQQQ
EMBL:DAAA02007129 EMBL:DAAA02007130 EMBL:DAAA02007131
EMBL:DAAA02007132 EMBL:DAAA02007133 EMBL:DAAA02007134 EMBL:HQ615718
IPI:IPI01009089 RefSeq:NP_001192107.1 UniGene:Bt.97637
Ensembl:ENSBTAT00000066030 GeneID:100336730 KEGG:bta:100336730
Uniprot:F1CYZ1
Length = 507
Score = 114 (45.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>RGD|621489 [details] [associations]
symbol:Mef2d "myocyte enhancer factor 2D" species:10116 "Rattus
norvegicus" [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA;ISO] [GO:0001649 "osteoblast
differentiation" evidence=IEA;ISO] [GO:0001958 "endochondral
ossification" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007512 "adult heart development"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0033613 "activating transcription factor binding"
evidence=IEA;ISO] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 RGD:621489
GO:GO:0005634 GO:GO:0006915 GO:GO:0045893 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:Q02078 InterPro:IPR022102 Pfam:PF12347
GeneTree:ENSGT00390000011828 HOVERGEN:HBG053944
HOGENOM:HOG000230620 CTD:4209 KO:K09262 EMBL:AJ005425 EMBL:BC081790
IPI:IPI00209367 RefSeq:NP_110487.2 UniGene:Rn.89018
ProteinModelPortal:O89038 SMR:O89038 STRING:O89038
PhosphoSite:O89038 PRIDE:O89038 Ensembl:ENSRNOT00000051394
GeneID:81518 KEGG:rno:81518 InParanoid:O89038 NextBio:615021
ArrayExpress:O89038 Genevestigator:O89038 Uniprot:O89038
Length = 507
Score = 114 (45.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|O89038 [details] [associations]
symbol:Mef2d "Myocyte-specific enhancer factor 2D"
species:10116 "Rattus norvegicus" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
RGD:621489 GO:GO:0005634 GO:GO:0006915 GO:GO:0045893 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:Q02078 InterPro:IPR022102 Pfam:PF12347
GeneTree:ENSGT00390000011828 HOVERGEN:HBG053944
HOGENOM:HOG000230620 CTD:4209 KO:K09262 EMBL:AJ005425 EMBL:BC081790
IPI:IPI00209367 RefSeq:NP_110487.2 UniGene:Rn.89018
ProteinModelPortal:O89038 SMR:O89038 STRING:O89038
PhosphoSite:O89038 PRIDE:O89038 Ensembl:ENSRNOT00000051394
GeneID:81518 KEGG:rno:81518 InParanoid:O89038 NextBio:615021
ArrayExpress:O89038 Genevestigator:O89038 Uniprot:O89038
Length = 507
Score = 114 (45.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|Q5T9U4 [details] [associations]
symbol:MEF2D "Myocyte-specific enhancer factor 2D"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
SUPFAM:SSF55455 EMBL:AL365181 InterPro:IPR022102 Pfam:PF12347
HOVERGEN:HBG053944 HOGENOM:HOG000230620 EMBL:AL139412
UniGene:Hs.314327 HGNC:HGNC:6997 ChiTaRS:MEF2D IPI:IPI00746421
SMR:Q5T9U4 STRING:Q5T9U4 Ensembl:ENST00000454816 Uniprot:Q5T9U4
Length = 510
Score = 114 (45.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>MGI|MGI:99533 [details] [associations]
symbol:Mef2d "myocyte enhancer factor 2D" species:10090 "Mus
musculus" [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISO] [GO:0001649 "osteoblast
differentiation" evidence=IGI] [GO:0001958 "endochondral
ossification" evidence=IGI] [GO:0002062 "chondrocyte
differentiation" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IC;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=ISO] [GO:0035914
"skeletal muscle cell differentiation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0042826
"histone deacetylase binding" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 MGI:MGI:99533 GO:GO:0005634 GO:GO:0006915
GO:GO:0007399 GO:GO:0003677 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0001649
GO:GO:0002062 GO:GO:0035914 GO:GO:0001958 InterPro:IPR022102
Pfam:PF12347 GeneTree:ENSGT00390000011828 HOVERGEN:HBG053944
HOGENOM:HOG000230620 OMA:VTAWQQQ ChiTaRS:MEF2D EMBL:S68893
EMBL:S68895 EMBL:AC137525 IPI:IPI00230611 IPI:IPI00331135
PIR:B56201 UniGene:Mm.485397 UniGene:Mm.490273
ProteinModelPortal:Q63943 SMR:Q63943 IntAct:Q63943 STRING:Q63943
PhosphoSite:Q63943 PaxDb:Q63943 PRIDE:Q63943
Ensembl:ENSMUST00000107559 UCSC:uc008pua.1 UCSC:uc008pub.1
InParanoid:Q63943 PMAP-CutDB:Q63943 Bgee:Q63943 CleanEx:MM_MEF2D
Genevestigator:Q63943 GermOnline:ENSMUSG00000001419 Uniprot:Q63943
Length = 514
Score = 114 (45.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|F1PDZ9 [details] [associations]
symbol:MEF2D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 InterPro:IPR022102 Pfam:PF12347
GeneTree:ENSGT00390000011828 OMA:VTAWQQQ EMBL:AAEX03005319
EMBL:AAEX03005320 Ensembl:ENSCAFT00000026608 Uniprot:F1PDZ9
Length = 520
Score = 114 (45.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>UNIPROTKB|Q14814 [details] [associations]
symbol:MEF2D "Myocyte-specific enhancer factor 2D"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0007512
"adult heart development" evidence=IEP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 Pathway_Interaction_DB:nfat_3pathway
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007399 GO:GO:0045944
GO:GO:0000981 GO:GO:0007517
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0007512
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0001649 GO:GO:0002062
EMBL:CH471121 GO:GO:0000977 GO:GO:0001958 InterPro:IPR022102
Pfam:PF12347 HOVERGEN:HBG053944 EMBL:L16794 EMBL:L16795
EMBL:AL139412 EMBL:BC040949 EMBL:BC054520 IPI:IPI00000784
IPI:IPI00216051 IPI:IPI00216052 IPI:IPI00216053 IPI:IPI00216054
IPI:IPI00394659 PIR:I53124 RefSeq:NP_001258558.1 RefSeq:NP_005911.1
UniGene:Hs.314327 ProteinModelPortal:Q14814 SMR:Q14814
IntAct:Q14814 STRING:Q14814 PhosphoSite:Q14814 DMDM:2500876
PRIDE:Q14814 Ensembl:ENST00000340875 Ensembl:ENST00000348159
Ensembl:ENST00000353795 Ensembl:ENST00000360595
Ensembl:ENST00000368240 GeneID:4209 KEGG:hsa:4209 UCSC:uc001fpb.3
UCSC:uc001fpc.3 CTD:4209 GeneCards:GC01M156433 HGNC:HGNC:6997
HPA:HPA004807 HPA:HPA007114 MIM:600663 neXtProt:NX_Q14814
PharmGKB:PA30735 InParanoid:Q14814 KO:K09262 OMA:VTAWQQQ
OrthoDB:EOG4RV2RC PhylomeDB:Q14814 ChiTaRS:MEF2D GenomeRNAi:4209
NextBio:16582 PMAP-CutDB:Q14814 ArrayExpress:Q14814 Bgee:Q14814
CleanEx:HS_MEF2D Genevestigator:Q14814 GermOnline:ENSG00000116604
Uniprot:Q14814
Length = 521
Score = 114 (45.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>ZFIN|ZDB-GENE-990415-164 [details] [associations]
symbol:mef2d "myocyte enhancer factor 2d"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0060914 "heart formation"
evidence=IGI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030241 "skeletal muscle myosin
thick filament assembly" evidence=IGI] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 ZFIN:ZDB-GENE-990415-164 GO:GO:0005634 GO:GO:0045944
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 GO:GO:0000976
GO:GO:0060914 GO:GO:0030241 InterPro:IPR022102 Pfam:PF12347
HOVERGEN:HBG053944 HOGENOM:HOG000230620 CTD:4209 KO:K09262
OrthoDB:EOG4RV2RC EMBL:U66570 IPI:IPI00500316 RefSeq:NP_571392.1
UniGene:Dr.75103 ProteinModelPortal:Q98870 SMR:Q98870 STRING:Q98870
PRIDE:Q98870 GeneID:30580 KEGG:dre:30580 InParanoid:Q98870
NextBio:20806950 ArrayExpress:Q98870 Bgee:Q98870 Uniprot:Q98870
Length = 529
Score = 114 (45.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q + I+ E R+VTF KR+ GL KK EL+ LC C I F+H +++
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNHSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
>TAIR|locus:2166620 [details] [associations]
symbol:AGL77 "AGAMOUS-like 77" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 eggNOG:KOG0014
EMBL:AB011478 HOGENOM:HOG000064579 ProtClustDB:CLSN2686226
EMBL:AB493770 IPI:IPI00536673 RefSeq:NP_198690.1 UniGene:At.65602
ProteinModelPortal:Q9FKR2 IntAct:Q9FKR2 STRING:Q9FKR2
EnsemblPlants:AT5G38740.1 GeneID:833865 KEGG:ath:AT5G38740
TAIR:At5g38740 InParanoid:Q9FKR2 PhylomeDB:Q9FKR2
Genevestigator:Q9FKR2 Uniprot:Q9FKR2
Length = 426
Score = 113 (44.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 12 SKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAEAVR-VLDK 70
S S+ + R + KK SEL TLC + AC I D + + WP E VR + +
Sbjct: 20 SSYSLASTSLSNRLETIFKKASELCTLCDIEACVIYYGP-DGELKTWPKEREKVRDIALR 78
Query: 71 FNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKK 107
FN R K +N + FL+KK N + ++KK
Sbjct: 79 FNQLNEALRHKKSVNLHGFLNKKKKNKGLKNPNKKKK 115
>CGD|CAL0003752 [details] [associations]
symbol:RLM1 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0031505 "fungal-type cell wall organization"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008301 "DNA binding, bending" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0036003 "positive regulation of
transcription from RNA polymerase II promoter in response to
stress" evidence=IEA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
CGD:CAL0003752 GO:GO:0005634 GO:GO:0003677 GO:GO:0006357
GO:GO:0006351 GO:GO:0035690 GO:GO:0031505 eggNOG:COG5068
SUPFAM:SSF55455 EMBL:AACQ01000005 EMBL:AACQ01000006 KO:K09265
RefSeq:XP_722733.1 RefSeq:XP_722879.1 ProteinModelPortal:Q5AMI4
GeneID:3635478 GeneID:3635703 KEGG:cal:CaO19.12132
KEGG:cal:CaO19.4662 Uniprot:Q5AMI4
Length = 611
Score = 114 (45.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGRR+++ E ++ + R VTF KR+AGL KK EL LC V II + + E S
Sbjct: 1 MGRRKIEIEPLTDDRNRTVTFVKRKAGLFKKAHELAVLCQVDLTVIIVGNNNKVYEY--S 58
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGL 111
EA + + +N IK R + ++++ K + + RK+R N L
Sbjct: 59 TVEANEIFNAYNK-TIKVRKQ--VHES-----KSPEYYSKFRKKRHLNEPL 101
>UNIPROTKB|Q5AMI4 [details] [associations]
symbol:RLM1 "Putative uncharacterized protein RLM1"
species:237561 "Candida albicans SC5314" [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0031505 "fungal-type cell wall organization" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 CGD:CAL0003752 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0035690
GO:GO:0031505 eggNOG:COG5068 SUPFAM:SSF55455 EMBL:AACQ01000005
EMBL:AACQ01000006 KO:K09265 RefSeq:XP_722733.1 RefSeq:XP_722879.1
ProteinModelPortal:Q5AMI4 GeneID:3635478 GeneID:3635703
KEGG:cal:CaO19.12132 KEGG:cal:CaO19.4662 Uniprot:Q5AMI4
Length = 611
Score = 114 (45.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGRR+++ E ++ + R VTF KR+AGL KK EL LC V II + + E S
Sbjct: 1 MGRRKIEIEPLTDDRNRTVTFVKRKAGLFKKAHELAVLCQVDLTVIIVGNNNKVYEY--S 58
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGL 111
EA + + +N IK R + ++++ K + + RK+R N L
Sbjct: 59 TVEANEIFNAYNK-TIKVRKQ--VHES-----KSPEYYSKFRKKRHLNEPL 101
>TAIR|locus:2042182 [details] [associations]
symbol:AGL44 "AGAMOUS-like 44" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=IMP]
[GO:0048527 "lateral root development" evidence=RCA;IMP]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0071249 "cellular response to nitrate" evidence=IEP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0007155
"cell adhesion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0010638 "positive regulation
of organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0052543 "callose deposition in cell wall" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0010167
"response to nitrate" evidence=IMP] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0007584 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
GO:GO:0071249 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 KO:K09264 EMBL:Z97057 EMBL:AC007210 EMBL:BT005861
EMBL:AK228244 IPI:IPI00529627 PIR:A84515 PIR:T52100
RefSeq:NP_179033.1 UniGene:At.126 ProteinModelPortal:Q9SI38
SMR:Q9SI38 IntAct:Q9SI38 STRING:Q9SI38 EnsemblPlants:AT2G14210.1
GeneID:815907 KEGG:ath:AT2G14210 GeneFarm:3545 TAIR:At2g14210
InParanoid:Q9SI38 OMA:YLQECHR PhylomeDB:Q9SI38
Genevestigator:Q9SI38 Uniprot:Q9SI38
Length = 234
Score = 109 (43.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 30/114 (26%), Positives = 61/114 (53%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR ++ I + R+VTF KRR+GL KK EL+ LC II +S + + S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYD-YAS 59
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNT---FLSKKISNLFERMRKERKKNRGL 111
+ +++++N +K ++N + F +++++L ++++ ++ +R L
Sbjct: 60 NSSMKTIIERYNR--VKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKL 111
>TAIR|locus:2206320 [details] [associations]
symbol:AGL23 "AGAMOUS-like 23" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009553 "embryo
sac development" evidence=IMP] [GO:0009658 "chloroplast
organization" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004512 GO:GO:0009658 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:Q02078 HOGENOM:HOG000238700 GO:GO:0009553
EMBL:AY141230 IPI:IPI00536845 PIR:T02359 RefSeq:NP_176715.1
UniGene:At.35891 ProteinModelPortal:O80807 SMR:O80807 IntAct:O80807
STRING:O80807 EnsemblPlants:AT1G65360.1 GeneID:842846
KEGG:ath:AT1G65360 TAIR:At1g65360 InParanoid:O80807 OMA:QNERENE
PhylomeDB:O80807 ProtClustDB:CLSN2679619 ArrayExpress:O80807
Genevestigator:O80807 Uniprot:O80807
Length = 226
Score = 108 (43.1 bits), Expect = 0.00010, P = 0.00010
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
+GRR+V+ ++KES +VTF KR+AGL KK SE TLC I+ F +++
Sbjct: 6 LGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIV---FSPAGKVFSF 62
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERM 101
V VL ++F RG + + NT L + + L +M
Sbjct: 63 GHPNVDVL--LDHF----RGCVVGHNNTNLDESYTKLHVQM 97
>TAIR|locus:2184118 [details] [associations]
symbol:FLC "FLOWERING LOCUS C" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP;RCA] [GO:0009266 "response to temperature stimulus"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043234 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910 GO:GO:0010048
ProtClustDB:CLSN2686365 EMBL:AL356332 EMBL:AF116527 EMBL:AF116528
IPI:IPI00542762 PIR:T50018 RefSeq:NP_196576.1 UniGene:At.1629
UniGene:At.75671 ProteinModelPortal:Q9S7Q7 SMR:Q9S7Q7
DIP:DIP-51640N IntAct:Q9S7Q7 STRING:Q9S7Q7 PaxDb:Q9S7Q7
PRIDE:Q9S7Q7 EnsemblPlants:AT5G10140.1 GeneID:830878
KEGG:ath:AT5G10140 GeneFarm:3548 TAIR:At5g10140 InParanoid:Q9S7Q7
OMA:GAEAEME PhylomeDB:Q9S7Q7 Genevestigator:Q9S7Q7 Uniprot:Q9S7Q7
Length = 196
Score = 106 (42.4 bits), Expect = 0.00013, P = 0.00013
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR++++ + I +S R+VTF KRR GL +K +L+ LC + A++ S + + S
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASV-ALLVVSASGKLYSFSS 59
Query: 61 PAEAVRVLDKF 71
V++LD++
Sbjct: 60 GDNLVKILDRY 70
>UNIPROTKB|D2T2F8 [details] [associations]
symbol:grcd4 "GRCD4 protein" species:18101 "Gerbera hybrid
cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN297860 IntAct:D2T2F8
Uniprot:D2T2F8
Length = 249
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II F ++ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII---FSNRGKLYEF 57
Query: 60 -SPAEAVRVLDKFNN 73
S + V+ L+K+++
Sbjct: 58 CSSSSMVKTLEKYHS 72
>UNIPROTKB|Q9ATF2 [details] [associations]
symbol:FBP5 "MADS-box transcription factor FBP5"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335235 ProteinModelPortal:Q9ATF2 IntAct:Q9ATF2
Uniprot:Q9ATF2
Length = 246
Score = 107 (42.7 bits), Expect = 0.00017, P = 0.00017
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II ++ E + S
Sbjct: 1 MGRGRVELKKIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSNRGKLYE-FSS 59
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLE 112
+ V+ LD++ G +N + ++ K + K L+
Sbjct: 60 TSNMVKTLDRYQKCSY---GTLEVNHRSVKDNNEERIYREYLKLKAKYESLQ 108
>TAIR|locus:2102871 [details] [associations]
symbol:AGL79 "AGAMOUS-like 79" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:Q02078 GO:GO:0048830 GO:GO:0010093 OMA:PPWMLRT EMBL:AY141238
IPI:IPI00517180 RefSeq:NP_189645.2 UniGene:At.36813
ProteinModelPortal:Q7X9H6 SMR:Q7X9H6 IntAct:Q7X9H6
EnsemblPlants:AT3G30260.1 GeneID:822726 KEGG:ath:AT3G30260
TAIR:At3g30260 InParanoid:Q7X9H6 PhylomeDB:Q7X9H6
ProtClustDB:CLSN2918545 ArrayExpress:Q7X9H6 Genevestigator:Q7X9H6
Uniprot:Q7X9H6
Length = 249
Score = 107 (42.7 bits), Expect = 0.00018, P = 0.00018
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ I + R+VTF KRR GL KK E++ LC I+ + E + +
Sbjct: 1 MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFE-YSA 59
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMN---QNTFLSK--KISNLFERMRKERKKNRGLEMDL 115
+ R+LD++ + N Q ++ K+ + + +++ + RG E+D
Sbjct: 60 GSSMERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDG 119
Query: 116 MFTQCLAGKDM 126
+ + L G +M
Sbjct: 120 LSIRDLQGVEM 130
>UNIPROTKB|D2T2G0 [details] [associations]
symbol:gsqua2 "GSQUA2 protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN298387 IntAct:D2T2G0
Uniprot:D2T2G0
Length = 238
Score = 102 (41.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAII 47
MGR RVQ + I + R+VTF KRR GL KK E++ LC I+
Sbjct: 1 MGRGRVQLKRIENKISRQVTFSKRRTGLLKKAHEISVLCDADVALIV 47
Score = 34 (17.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 76 IKRRGKYMMNQNTFLSKKI 94
+ ++ + + QN LSKK+
Sbjct: 154 LHKKERSLQEQNNTLSKKL 172
>TAIR|locus:2143261 [details] [associations]
symbol:SEP1 "SEPALLATA1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048481 "ovule development" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0009886 "post-embryonic morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0010093 "specification of floral organ identity" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048507 "meristem development"
evidence=RCA] [GO:0009908 "flower development" evidence=IDA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 KO:K09264 GO:GO:0048481
IPI:IPI00891534 RefSeq:NP_001119230.1 UniGene:At.10163
UniGene:At.49025 ProteinModelPortal:F4KB90 SMR:F4KB90 PRIDE:F4KB90
EnsemblPlants:AT5G15800.2 GeneID:831436 KEGG:ath:AT5G15800
OMA:CSEQITA Uniprot:F4KB90
Length = 262
Score = 107 (42.7 bits), Expect = 0.00020, P = 0.00020
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II F ++ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII---FSNRGKLYEF 57
Query: 60 -SPAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFT 118
S + ++ LD++ G +N +K++ N + K + + L+
Sbjct: 58 CSSSNMLKTLDRYQKCSY---GSIEVNNKP--AKELENSYREYLKLKGRYENLQRQ---Q 109
Query: 119 QCLAGKDM 126
+ L G+D+
Sbjct: 110 RNLLGEDL 117
>UNIPROTKB|Q9ZS27 [details] [associations]
symbol:gdef2 "MADS-box protein, GDEF2" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
EMBL:AJ009725 ProteinModelPortal:Q9ZS27 IntAct:Q9ZS27
Uniprot:Q9ZS27
Length = 228
Score = 106 (42.4 bits), Expect = 0.00021, P = 0.00021
Identities = 44/158 (27%), Positives = 69/158 (43%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R ++Q + I + R+VT+ KRR GL KK SELT LC I+ + D E + S
Sbjct: 1 MARGKIQIKKIENSTNRQVTYSKRRNGLFKKASELTVLCDAKVSIIMVSCTDKLHE-YIS 59
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLM--FT 118
P+ + F+ + K G + N + +K+ E +R+ ++ NR L +
Sbjct: 60 PSITTKQF--FDQYQ-KASGIDLWNSHY---EKMQ---EELRQLKEVNRNLRRQIRQRLG 110
Query: 119 QCLAGKDMNNF-DCXXXXXXXXXXXXXX-IKVIADKIE 154
CL F D +KVI +K+E
Sbjct: 111 DCLEDLGFEEFLDLEKESQEAVYIIRERKLKVIGNKLE 148
>UNIPROTKB|Q9ATE5 [details] [associations]
symbol:FBP24 "MADS-box protein FBP24" species:4102 "Petunia
x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AF335242
ProteinModelPortal:Q9ATE5 SMR:Q9ATE5 IntAct:Q9ATE5 Uniprot:Q9ATE5
Length = 268
Score = 107 (42.7 bits), Expect = 0.00021, P = 0.00021
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I ++ R+VTF KRRAGL KK EL+ LC II +S E
Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQ 63
Query: 61 PAEAVRVLDKF 71
P +++ ++
Sbjct: 64 PHSMSQIISRY 74
>SGD|S000006010 [details] [associations]
symbol:RLM1 "MADS-box transcription factor" species:4932
"Saccharomyces cerevisiae" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0008301 "DNA binding, bending" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IMP] [GO:0036003
"positive regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IDA;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 SGD:S000006010 GO:GO:0005634 GO:GO:0007165
GO:GO:0043565 GO:GO:0008301 GO:GO:0000982 EMBL:BK006949
eggNOG:COG5068 SUPFAM:SSF55455 EMBL:U43281 KO:K09265 GO:GO:0036003
GeneTree:ENSGT00390000011828 OrthoDB:EOG42NN89 EMBL:D63340
PIR:S61977 RefSeq:NP_015236.1 ProteinModelPortal:Q12224 SMR:Q12224
DIP:DIP-2480N IntAct:Q12224 MINT:MINT-2781402 STRING:Q12224
PaxDb:Q12224 EnsemblFungi:YPL089C GeneID:856016 KEGG:sce:YPL089C
CYGD:YPL089c OMA:NNTFYEF NextBio:980914 Genevestigator:Q12224
GermOnline:YPL089C Uniprot:Q12224
Length = 676
Score = 111 (44.1 bits), Expect = 0.00024, P = 0.00024
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS 50
MGRR+++ + IS + R VTF KR+AGL KK EL+ LC V II S
Sbjct: 1 MGRRKIEIQRISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIILGS 50
>UNIPROTKB|Q10CQ1 [details] [associations]
symbol:MADS14 "MADS-box transcription factor 14"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:DP000009 EMBL:AP008209 eggNOG:COG5068 SUPFAM:SSF55455
GO:GO:0009908 KO:K09264 EMBL:AF377947 EMBL:AC135225 EMBL:AC092556
EMBL:AF058697 EMBL:AB041020 EMBL:AY332478 EMBL:AY551916
RefSeq:NP_001051300.1 UniGene:Os.2348 ProteinModelPortal:Q10CQ1
IntAct:Q10CQ1 EnsemblPlants:LOC_Os03g54160.2 GeneID:4334140
KEGG:osa:4334140 Gramene:Q10CQ1 ProtClustDB:CLSN2694303
Uniprot:Q10CQ1
Length = 246
Score = 106 (42.4 bits), Expect = 0.00025, P = 0.00025
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +VQ + I + R+VTF KRR+GL KK +E++ LC II F + +++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALII---FSTKGKLYEY 57
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
++ +DK ++R +Y + +S + + RK +E +
Sbjct: 58 ATDSC--MDKI----LERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKH 111
Query: 121 LAGKDMNNFD 130
L G+D+ + +
Sbjct: 112 LMGEDLESLN 121
>UNIPROTKB|Q6EUV7 [details] [associations]
symbol:grcd2 "MADS domain protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AJ784156
ProteinModelPortal:Q6EUV7 IntAct:Q6EUV7 Uniprot:Q6EUV7
Length = 247
Score = 106 (42.4 bits), Expect = 0.00025, P = 0.00025
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II F ++ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII---FSNRGKLFEF 57
Query: 60 -SPAEAVRVLDKFNN 73
S + +++L+++ N
Sbjct: 58 CSTSNMLKMLERYQN 72
>UNIPROTKB|Q7XUN2 [details] [associations]
symbol:MADS17 "MADS-box transcription factor 17"
species:39947 "Oryza sativa Japonica Group" [GO:0010093
"specification of floral organ identity" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 GO:GO:0010228 SUPFAM:SSF55455
GO:GO:0010093 EMBL:AF109153 EMBL:AY551918 EMBL:AL606688
EMBL:AF095646 ProteinModelPortal:Q7XUN2 IntAct:Q7XUN2
KEGG:dosa:Os04t0580700-01 Gramene:Q7XUN2 Uniprot:Q7XUN2
Length = 249
Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II F + +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALII---FSSRGKLYEF 57
Query: 61 PAEAV-RVLDKFNN 73
+ + + L+K+N+
Sbjct: 58 GSAGINKTLEKYNS 71
>TAIR|locus:4010713489 [details] [associations]
symbol:AGL64 "AGAMOUS-like 64" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:P11831 HOGENOM:HOG000238700 EMBL:AY141244 IPI:IPI00852269
RefSeq:NP_001077625.1 UniGene:At.40641 ProteinModelPortal:Q7XJK9
SMR:Q7XJK9 IntAct:Q7XJK9 STRING:Q7XJK9 EnsemblPlants:AT1G29962.1
GeneID:5007741 KEGG:ath:AT1G29962 TAIR:At1g29962 eggNOG:NOG321251
OMA:NEDAWWK PhylomeDB:Q7XJK9 ProtClustDB:CLSN2679626
Genevestigator:Q7XJK9 Uniprot:Q7XJK9
Length = 185
Score = 103 (41.3 bits), Expect = 0.00028, P = 0.00028
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSP 61
G++R+ + I K+ R VT KRR G+ KLSEL+ LCG A + S +P + SP
Sbjct: 8 GKQRINIKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEV-AFLGYSCSGKPYTFGSP 66
Query: 62 AEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMR 102
+ V ++F N G+ + ++ L + + N ++ +
Sbjct: 67 SFQA-VAERFLN------GEASSSSSSSLQRSVMNAHQQAK 100
>SGD|S000000386 [details] [associations]
symbol:SMP1 "Putative transcription factor of the MADS-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IC] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008301 "DNA binding, bending"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0061393 "positive regulation of transcription from RNA
polymerase II promoter in response to osmotic stress"
evidence=IGI;IMP] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 SGD:S000000386
GO:GO:0005634 GO:GO:0005737 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:BK006936 GO:GO:0008301 eggNOG:COG5068
SUPFAM:SSF55455 KO:K09265 EMBL:U02073 GO:GO:0061393
RefSeq:NP_009744.3 GeneID:852483 KEGG:sce:YBR185C
RefSeq:NP_009741.3 GeneID:852480 KEGG:sce:YBR182C
GeneTree:ENSGT00390000011828 OrthoDB:EOG42NN89 EMBL:Z36051
EMBL:AY693072 PIR:S46054 ProteinModelPortal:P38128 SMR:P38128
IntAct:P38128 MINT:MINT-7544146 STRING:P38128 EnsemblFungi:YBR182C
CYGD:YBR182c NextBio:971450 Genevestigator:P38128
GermOnline:YBR182C Uniprot:P38128
Length = 452
Score = 109 (43.4 bits), Expect = 0.00028, P = 0.00028
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS 50
MGRR+++ E I + R VTF KR+AGL KK EL+ LC V II S
Sbjct: 1 MGRRKIEIEPIKDDRNRTVTFIKRKAGLFKKAHELSVLCQVDIAVIILGS 50
>TAIR|locus:2041233 [details] [associations]
symbol:SVP "AT2G22540" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;RCA] [GO:0009910 "negative regulation
of flower development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048438 "floral whorl development" evidence=IGI]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=IDA] [GO:0009266 "response to temperature stimulus"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010076 "maintenance of floral
meristem identity" evidence=IGI] [GO:0010582 "floral meristem
determinacy" evidence=IGI] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0045892
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
GO:GO:0009910 GO:GO:0010582 GO:GO:0048438 GO:GO:0010076
EMBL:AC006592 GO:GO:0009266 GO:GO:0000900 OMA:CSSSMKE EMBL:AF211171
EMBL:EU078686 IPI:IPI00536448 IPI:IPI00549063 IPI:IPI00938617
RefSeq:NP_001154528.1 RefSeq:NP_179840.2 UniGene:At.22081
ProteinModelPortal:Q9FVC1 SMR:Q9FVC1 DIP:DIP-33797N IntAct:Q9FVC1
STRING:Q9FVC1 PaxDb:Q9FVC1 PRIDE:Q9FVC1 EnsemblPlants:AT2G22540.1
GeneID:816787 KEGG:ath:AT2G22540 GeneFarm:3510 TAIR:At2g22540
InParanoid:Q9FVC1 PhylomeDB:Q9FVC1 ProtClustDB:CLSN2690861
Genevestigator:Q9FVC1 GermOnline:AT2G22540 Uniprot:Q9FVC1
Length = 240
Score = 105 (42.0 bits), Expect = 0.00032, P = 0.00032
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R ++Q I + R+VTF KRR GL KK EL+ LC II +S E S
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
Query: 61 PAEAV--------RVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKN-RGL 111
+ V + L+K + P + + +SK+I++ R+R+ R + +GL
Sbjct: 61 SMKEVLERHNLQSKNLEKLDQ-PSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGL 119
Query: 112 EMD 114
+++
Sbjct: 120 DIE 122
>UNIPROTKB|Q0D4T4 [details] [associations]
symbol:MADS18 "MADS-box transcription factor 18"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076 GO:GO:0010077
GO:GO:0010154 GO:GO:0009933 EMBL:AP008213 EMBL:AF091458
EMBL:AJ011675 EMBL:AP005175 RefSeq:NP_001060225.1 UniGene:Os.4573
ProteinModelPortal:Q0D4T4 IntAct:Q0D4T4
EnsemblPlants:LOC_Os07g41370.1 GeneID:4343851
KEGG:dosa:Os07t0605200-01 KEGG:osa:4343851 Gramene:Q0D4T4
OMA:PPWMLRT ProtClustDB:CLSN2696916 Uniprot:Q0D4T4
Length = 249
Score = 97 (39.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR VQ I + R+VTF KRR GL KK E++ LC I+ ++ E + S
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYE-FSS 59
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNT 88
+ +L+++ + R ++ NT
Sbjct: 60 HSSMEGILERYQRYSFDERA--VLEPNT 85
Score = 40 (19.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 91 SKKISNLFERMRKERKKNRGLEMDLMFTQCL--AGKDMNN 128
SKK LFE + + +KK + L+ Q L K+ NN
Sbjct: 141 SKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNN 180
>TAIR|locus:2144387 [details] [associations]
symbol:AGL101 "AGAMOUS-like 101" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 eggNOG:NOG280508
HOGENOM:HOG000033847 EMBL:DQ056693 IPI:IPI00521196
RefSeq:NP_198057.1 UniGene:At.55030 ProteinModelPortal:Q4PSE3
SMR:Q4PSE3 IntAct:Q4PSE3 STRING:Q4PSE3 EnsemblPlants:AT5G27050.1
GeneID:832763 KEGG:ath:AT5G27050 TAIR:At5g27050 PhylomeDB:Q4PSE3
ProtClustDB:CLSN2916565 Genevestigator:Q4PSE3 Uniprot:Q4PSE3
Length = 120
Score = 89 (36.4 bits), Expect = 0.00034, P = 0.00034
Identities = 22/66 (33%), Positives = 30/66 (45%)
Query: 30 KKLSELTTLCGVTACAIICASFDHQPEIWPSPAEAVR-VLDKFNNFPIKRRGKYMMNQNT 88
KK EL+TLC + C I + WP VR + ++F + R K N +
Sbjct: 3 KKALELSTLCNIEVCVIYYGRDGELFKTWPEDESKVRDMAERFTKLNERERRKKRTNLSL 62
Query: 89 FLSKKI 94
FL KKI
Sbjct: 63 FLRKKI 68
>TAIR|locus:2202715 [details] [associations]
symbol:AGL49 "AGAMOUS-like 49" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AC005966 eggNOG:NOG329736
HOGENOM:HOG000153854 ProtClustDB:CLSN2679707 IPI:IPI00541612
PIR:G96624 RefSeq:NP_176212.1 UniGene:At.64872
ProteinModelPortal:Q9ZUI9 SMR:Q9ZUI9 IntAct:Q9ZUI9 STRING:Q9ZUI9
EnsemblPlants:AT1G60040.1 GeneID:842298 KEGG:ath:AT1G60040
TAIR:At1g60040 InParanoid:Q9ZUI9 OMA:LRGSHET PhylomeDB:Q9ZUI9
Genevestigator:Q9ZUI9 Uniprot:Q9ZUI9
Length = 284
Score = 106 (42.4 bits), Expect = 0.00034, P = 0.00034
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 21 FKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP-----SPAEAVRVLDKFNNFP 75
FK+R G KKK SEL+ LCG + IC D+ +WP +P ++ KFN
Sbjct: 26 FKQRFPGFKKKASELSVLCG-NSVGFICYGPDNDLHVWPQSQDHNPQALHEIVAKFNALS 84
Query: 76 IKRRGKYMMNQNTF 89
+RR + + N F
Sbjct: 85 DERRKNHACDLNDF 98
>UNIPROTKB|Q0J466 [details] [associations]
symbol:MADS7 "MADS-box transcription factor 7"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009908 EMBL:AP008214
EMBL:U78891 EMBL:U31994 EMBL:Y15008 EMBL:AY332477 EMBL:AY551921
EMBL:AP005529 PIR:T04169 PIR:T04307 PIR:T04335
RefSeq:NP_001062335.1 UniGene:Os.2236 ProteinModelPortal:Q0J466
IntAct:Q0J466 EnsemblPlants:LOC_Os08g41950.2 GeneID:4346134
KEGG:osa:4346134 Gramene:Q0J466 ProtClustDB:CLSN2697505
Uniprot:Q0J466
Length = 249
Score = 105 (42.0 bits), Expect = 0.00035, P = 0.00035
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II F ++ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII---FSNRGKLYEF 57
Query: 60 -SPAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFT 118
S + L+K+ ++ Y T + + S + R E K + +L T
Sbjct: 58 CSTQSMTKTLEKY------QKCSYA-GPETAVQNRESEQLKASRNEYLKLKARVENLQRT 110
Query: 119 QC-LAGKDMNN 128
Q L G+D+++
Sbjct: 111 QRNLLGEDLDS 121
>TAIR|locus:4515103623 [details] [associations]
symbol:AT5G27944 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC007627 eggNOG:NOG280508 HOGENOM:HOG000033847
ProtClustDB:CLSN2686952 IPI:IPI00891516 RefSeq:NP_001119289.1
UniGene:At.74347 ProteinModelPortal:B3H5S0 STRING:B3H5S0
EnsemblPlants:AT5G27944.1 GeneID:6240316 KEGG:ath:AT5G27944
TAIR:At5g27944 OMA:WTEPLEN PhylomeDB:B3H5S0 Genevestigator:B3H5S0
Uniprot:B3H5S0
Length = 224
Score = 104 (41.7 bits), Expect = 0.00039, P = 0.00039
Identities = 32/112 (28%), Positives = 48/112 (42%)
Query: 10 LISKESVRKVT-FKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAEAVR-V 67
L S + +K T R + KK EL+TLC + C I+ + WP VR +
Sbjct: 26 LSSSSTAKKTTNLSMREQTMFKKALELSTLCDIEVCVILYGRDGELIKTWPEDQSKVRDM 85
Query: 68 LDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQ 119
++F+ + R K N + FL KKI + + K + LE L Q
Sbjct: 86 AERFSRLHERERCKKRTNLSLFLRKKILDDNKLSEKVLEMEDSLESGLRVLQ 137
>UNIPROTKB|Q9ATF1 [details] [associations]
symbol:FBP9 "MADS-box transcription factor FBP9"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335236 ProteinModelPortal:Q9ATF1 IntAct:Q9ATF1
Uniprot:Q9ATF1
Length = 245
Score = 104 (41.7 bits), Expect = 0.00048, P = 0.00048
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II +S E S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFC-S 59
Query: 61 PAEAVRVLDKF 71
+ ++ L+K+
Sbjct: 60 TSSMMKTLEKY 70
>TAIR|locus:2029411 [details] [associations]
symbol:AGL67 "AGAMOUS-like 67" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009686
"gibberellin biosynthetic process" evidence=RCA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 EMBL:CP002684 GO:GO:0005829
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 IPI:IPI00544332 RefSeq:NP_001117616.1
RefSeq:NP_177918.2 UniGene:At.34362 UniGene:At.52553
ProteinModelPortal:F4I8L6 SMR:F4I8L6 EnsemblPlants:AT1G77950.1
EnsemblPlants:AT1G77950.2 GeneID:844130 KEGG:ath:AT1G77950
OMA:CEANLIN ArrayExpress:F4I8L6 Uniprot:F4I8L6
Length = 252
Score = 104 (41.7 bits), Expect = 0.00052, P = 0.00052
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I K + R++TF KR+ GL KK EL+TLC + ++ + D ++
Sbjct: 1 MGRVKLELKRIEKSTNRQITFSKRKKGLIKKAYELSTLCDIDLALLMFSPSDRLC-LFSG 59
Query: 61 PAEAVRVLDKFNNFPIKRR 79
VL ++ N P + R
Sbjct: 60 QTRIEDVLARYINLPDQER 78
>TAIR|locus:2121070 [details] [associations]
symbol:AGL21 "AT4G37940" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009556 "microsporogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2683748 EMBL:AF336979 EMBL:AL035538 IPI:IPI00531853
PIR:T05621 RefSeq:NP_195507.1 UniGene:At.28801
ProteinModelPortal:Q9SZJ6 SMR:Q9SZJ6 IntAct:Q9SZJ6 STRING:Q9SZJ6
EnsemblPlants:AT4G37940.1 GeneID:829950 KEGG:ath:AT4G37940
GeneFarm:3544 TAIR:At4g37940 InParanoid:Q9SZJ6 OMA:DDESHTQ
PhylomeDB:Q9SZJ6 ArrayExpress:Q9SZJ6 Genevestigator:Q9SZJ6
GermOnline:AT4G37940 Uniprot:Q9SZJ6
Length = 228
Score = 103 (41.3 bits), Expect = 0.00055, P = 0.00054
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR ++ + I + R+VTF KRR GL KK EL LC II F +++
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLII---FSSTGKLYDF 57
Query: 61 PAEAVR-VLDKFNNFPIKRR 79
+ +++ V+D++N I+++
Sbjct: 58 ASSSMKSVIDRYNKSKIEQQ 77
>DICTYBASE|DDB_G0282835 [details] [associations]
symbol:srfB "putative MADS-box transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0019933
"cAMP-mediated signaling" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 dictyBase:DDB_G0282835 GO:GO:0005634
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0019933
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11831 ProtClustDB:CLSZ2430546
RefSeq:XP_639351.1 ProteinModelPortal:Q54RY6 SMR:Q54RY6
PRIDE:Q54RY6 EnsemblProtists:DDB0220492 GeneID:8623792
KEGG:ddi:DDB_G0282835 OMA:WSTASSC Uniprot:Q54RY6
Length = 467
Score = 107 (42.7 bits), Expect = 0.00055, P = 0.00055
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDH 53
GRR++ E I +S R +TF KR++G+ KK EL+TL G I+ + H
Sbjct: 37 GRRKINIEFIGDKSRRHITFSKRKSGIMKKAYELSTLTGTQVLLIVASETGH 88
>ASPGD|ASPL0000034782 [details] [associations]
symbol:rlmA species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0071554 "cell wall organization or biogenesis" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 EMBL:BN001306 GO:GO:0006351 EMBL:AACD01000051
SUPFAM:SSF55455 KO:K09265 RefSeq:XP_660588.1
ProteinModelPortal:G5EAU0 EnsemblFungi:CADANIAT00010096
GeneID:2874184 KEGG:ani:AN2984.2 HOGENOM:HOG000195659 OMA:AVIIFGH
Uniprot:G5EAU0
Length = 605
Score = 108 (43.1 bits), Expect = 0.00058, P = 0.00058
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIW 58
MGRR+++ + I + R VTF KR+ GL KK EL LC V II F H +++
Sbjct: 1 MGRRKIEIKAIKDDRNRSVTFLKRKGGLFKKAHELAVLCSVDVAVII---FGHNKKLY 55
>UNIPROTKB|Q6Q9I2 [details] [associations]
symbol:MADS15 "MADS-box transcription factor 15"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AP003759 EMBL:AP004342
ProtClustDB:CLSN2694303 EMBL:AF058698 EMBL:AB003325 EMBL:AF345911
EMBL:AY551920 RefSeq:NP_001058720.1 UniGene:Os.12750
ProteinModelPortal:Q6Q9I2 IntAct:Q6Q9I2
EnsemblPlants:LOC_Os07g01820.3 GeneID:4342214
KEGG:dosa:Os07t0108900-01 KEGG:osa:4342214 Gramene:Q6Q9I2
Uniprot:Q6Q9I2
Length = 267
Score = 104 (41.7 bits), Expect = 0.00058, P = 0.00058
Identities = 35/130 (26%), Positives = 63/130 (48%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +VQ + I + R+VTF KRR GL KK E++ LC AI+ F + +++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIV---FSPKGKLYEY 57
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
++ R +DK ++R +Y + +S + + + RK +E +
Sbjct: 58 ATDS-R-MDKI----LERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKH 111
Query: 121 LAGKDMNNFD 130
L G+D+ + +
Sbjct: 112 LMGEDLESLN 121
>UNIPROTKB|Q03414 [details] [associations]
symbol:mef2a "Myocyte-specific enhancer factor 2A homolog"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=IC]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 SUPFAM:SSF55455 InterPro:IPR022102
Pfam:PF12347 CTD:4205 KO:K09260 EMBL:Z19123 EMBL:BC046368
PIR:S28060 RefSeq:NP_001095216.1 UniGene:Xl.123 GeneID:380452
KEGG:xla:380452 Xenbase:XB-GENE-487398 Uniprot:Q03414
Length = 516
Score = 100 (40.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR+++Q I E R+VTF KR+ GL KK EL+ LC C I F+ +++
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCD---CEIALIIFNSSNKLFQY 57
Query: 60 SPAEAVRVLDKFNNF 74
+ + +VL K+ +
Sbjct: 58 ASTDMDKVLLKYTEY 72
Score = 43 (20.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 80 GKYMMNQNTFLS-KKISNLFERMRKERKKNRGL 111
G Y++ +T KKI+ F+ M + K + GL
Sbjct: 142 GSYVLTPHTEEKYKKINEEFDNMMRSHKISPGL 174
>TAIR|locus:2030621 [details] [associations]
symbol:AGL104 "AGAMOUS-like 104" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009555 "pollen development" evidence=IGI] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0010584 "pollen exine
formation" evidence=RCA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:Q02078 EMBL:AC069252 ProtClustDB:CLSN2679793 EMBL:DQ056457
IPI:IPI00546953 PIR:A86354 RefSeq:NP_173632.1 UniGene:At.41619
ProteinModelPortal:Q9LM46 SMR:Q9LM46 STRING:Q9LM46
EnsemblPlants:AT1G22130.1 GeneID:838818 KEGG:ath:AT1G22130
TAIR:At1g22130 HOGENOM:HOG000242882 InParanoid:Q9LM46 OMA:ERESALY
PhylomeDB:Q9LM46 Genevestigator:Q9LM46 Uniprot:Q9LM46
Length = 335
Score = 105 (42.0 bits), Expect = 0.00063, P = 0.00063
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I + R+VTF KRR GL KK EL+ LC + I+ + D ++
Sbjct: 1 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSDRL-SLFSG 59
Query: 61 PAEAVRVLDKFNNFPIKRRGK--YMMNQN 87
V +F N P + R Y +QN
Sbjct: 60 KTRIEDVFSRFINLPKQERESALYFPDQN 88
>TAIR|locus:2025951 [details] [associations]
symbol:AGL50 "AGAMOUS-like 50" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC007258 SUPFAM:SSF55455 IPI:IPI00543058
PIR:B96622 RefSeq:NP_176190.1 UniGene:At.52275
ProteinModelPortal:Q9XIE7 SMR:Q9XIE7 STRING:Q9XIE7
EnsemblPlants:AT1G59810.1 GeneID:842274 KEGG:ath:AT1G59810
TAIR:At1g59810 eggNOG:NOG329736 HOGENOM:HOG000153854
InParanoid:Q9XIE7 PhylomeDB:Q9XIE7 ProtClustDB:CLSN2679707
Genevestigator:Q9XIE7 Uniprot:Q9XIE7
Length = 283
Score = 104 (41.7 bits), Expect = 0.00066, P = 0.00066
Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 21 FKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP-----SPAEAVRVLDKFNNFP 75
FK+R G KKK SEL+ LCG + IC D +WP +P ++ KFN
Sbjct: 25 FKQRFPGFKKKASELSVLCG-NSVGFICYGPDSDLHVWPQSQDHNPQALHEIVAKFNALS 83
Query: 76 IKRRGKYMMNQNTF 89
+RR + + N F
Sbjct: 84 DERRKNHACDLNDF 97
>TAIR|locus:2144345 [details] [associations]
symbol:MAF3 "MADS AFFECTING FLOWERING 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 GO:GO:0009910
GO:GO:0010048 HSSP:P11746 ProtClustDB:CLSN2686365 EMBL:AB026633
EMBL:AY231445 EMBL:EU980617 EMBL:EU980619 EMBL:EU980621
EMBL:EU980626 IPI:IPI00517424 RefSeq:NP_201311.1 UniGene:At.21040
ProteinModelPortal:Q9LSR7 SMR:Q9LSR7 EnsemblPlants:AT5G65060.1
GeneID:836630 KEGG:ath:AT5G65060 TAIR:At5g65060 InParanoid:Q9LSR7
OMA:GMARENG PhylomeDB:Q9LSR7 Genevestigator:Q9LSR7 Uniprot:Q9LSR7
Length = 196
Score = 101 (40.6 bits), Expect = 0.00067, P = 0.00067
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS 50
MGRR+V+ + I +S R+VTF KRR GL +K +L+ LC ++ A++ S
Sbjct: 1 MGRRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLSILCE-SSIAVVAVS 49
>TAIR|locus:2032372 [details] [associations]
symbol:SEP3 "SEPALLATA3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=RCA;IMP] [GO:0010093 "specification of floral organ
identity" evidence=RCA;IMP] [GO:0009908 "flower development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048481 "ovule development" evidence=RCA;IMP] [GO:0048833
"specification of floral organ number" evidence=IMP] [GO:0048440
"carpel development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0001708 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0010093 GO:GO:0048481 GO:GO:0048833
EMBL:AC002396 EMBL:AF015552 EMBL:AY088272 EMBL:AK118696
IPI:IPI00516255 IPI:IPI00534499 PIR:T00656 RefSeq:NP_564214.2
RefSeq:NP_850953.1 UniGene:At.24086 ProteinModelPortal:O22456
SMR:O22456 IntAct:O22456 STRING:O22456 PaxDb:O22456 PRIDE:O22456
EnsemblPlants:AT1G24260.2 GeneID:839040 KEGG:ath:AT1G24260
GeneFarm:3497 TAIR:At1g24260 InParanoid:O22456 OMA:PLECEPI
PhylomeDB:O22456 ProtClustDB:CLSN2690422 Genevestigator:O22456
GermOnline:AT1G24260 Uniprot:O22456
Length = 251
Score = 103 (41.3 bits), Expect = 0.00069, P = 0.00069
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II F ++ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII---FSNRGKLYEF 57
Query: 60 -SPAEAVRVLDKF 71
S + +R L+++
Sbjct: 58 CSSSSMLRTLERY 70
>TAIR|locus:2143646 [details] [associations]
symbol:AGL89 "AGAMOUS-like 89" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 ProtClustDB:CLSN2686952 EMBL:AY141226
EMBL:DQ446991 EMBL:BT025291 EMBL:AB493763 IPI:IPI00545997
RefSeq:NP_198110.1 UniGene:At.30798 ProteinModelPortal:Q7XJL1
SMR:Q7XJL1 IntAct:Q7XJL1 STRING:Q7XJL1 EnsemblPlants:AT5G27580.1
GeneID:832818 KEGG:ath:AT5G27580 TAIR:At5g27580 OMA:QWTEPLV
PhylomeDB:Q7XJL1 ArrayExpress:Q7XJL1 Genevestigator:Q7XJL1
Uniprot:Q7XJL1
Length = 223
Score = 102 (41.0 bits), Expect = 0.00069, P = 0.00069
Identities = 32/112 (28%), Positives = 47/112 (41%)
Query: 10 LISKESVRKVT-FKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAEAVR-V 67
L S + +K T R + KK EL+TLC + C I + WP VR +
Sbjct: 26 LSSSSTAKKTTNLSMREETMFKKALELSTLCDIEVCVIYYGRDGELIKTWPEDQSKVRDM 85
Query: 68 LDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQ 119
++F+ + R K N + FL KKI + + K + LE L Q
Sbjct: 86 AERFSKLHERERRKKRTNLSLFLRKKILDDNKLSEKVLEMKDSLESGLRVLQ 137
>TAIR|locus:2082618 [details] [associations]
symbol:AGL16 "AGAMOUS-like 16" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010440 "stomatal lineage progression" evidence=IMP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0042803 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
EMBL:AY141209 EMBL:BT030046 EMBL:AF312662 IPI:IPI00522001
IPI:IPI01027879 RefSeq:NP_191282.2 UniGene:At.21102 HSSP:Q02078
ProteinModelPortal:A2RVQ5 SMR:A2RVQ5 IntAct:A2RVQ5 STRING:A2RVQ5
PRIDE:A2RVQ5 EnsemblPlants:AT3G57230.1 GeneID:824890
KEGG:ath:AT3G57230 GeneFarm:3515 TAIR:At3g57230 InParanoid:A2RVQ5
OMA:ASEIQFW PhylomeDB:A2RVQ5 ProtClustDB:CLSN2680436
ArrayExpress:A2RVQ5 Genevestigator:A2RVQ5 GO:GO:0010440
Uniprot:A2RVQ5
Length = 240
Score = 96 (38.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS 50
MGR ++ + I+ + R+VTF KRR GL KK EL LC II +S
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSS 50
Score = 37 (18.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 76 IKRRGKYMMNQNTFLSKKISNLFERMRKE 104
+ R G + +N L KK+ NL + E
Sbjct: 152 LNREGNLVHQENLDLHKKV-NLMHQQNME 179
Score = 36 (17.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 73 NFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKN---RGLEM 113
N + ++ M QN L +K+S + E ++ K + GL+M
Sbjct: 163 NLDLHKKVNLMHQQNMELHEKVSEV-EGVKIANKNSLLTNGLDM 205
>UNIPROTKB|Q0DEB8 [details] [associations]
symbol:MADS5 "MADS-box transcription factor 5"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 EMBL:AP008212 EMBL:CM000143
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
GO:GO:0009908 ProtClustDB:CLSN2693669 EMBL:U78890 EMBL:AB026295
PIR:T04168 RefSeq:NP_001056891.1 UniGene:Os.4367
ProteinModelPortal:Q0DEB8 IntAct:Q0DEB8
EnsemblPlants:LOC_Os06g06750.1 GeneID:4340218
KEGG:dosa:Os06t0162800-01 KEGG:osa:4340218 Gramene:Q0DEB8
OMA:GKEHILL Uniprot:Q0DEB8
Length = 225
Score = 95 (38.5 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAII 47
MGR +V+ + I + R+VTF KRR GL KK EL+ LC II
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALII 47
Score = 37 (18.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 66 RVLDKFNNFPIKRRGKYMMNQNTFLSKKI 94
++LD+ F +KR+ + + + N L +KI
Sbjct: 147 QLLDQV--FELKRKEQQLQDANKDLKRKI 173
>TAIR|locus:2025386 [details] [associations]
symbol:AGL28 "AGAMOUS-like 28" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 EMBL:AC061957 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
ProtClustDB:CLSN2679619 EMBL:AY141231 EMBL:DQ446218 EMBL:AB493420
IPI:IPI00522692 PIR:H86145 RefSeq:NP_171660.1 UniGene:At.42643
ProteinModelPortal:Q9LMM8 SMR:Q9LMM8 IntAct:Q9LMM8 STRING:Q9LMM8
EnsemblPlants:AT1G01530.1 GeneID:837142 KEGG:ath:AT1G01530
TAIR:At1g01530 InParanoid:Q9LMM8 OMA:KMTNESN PhylomeDB:Q9LMM8
ArrayExpress:Q9LMM8 Genevestigator:Q9LMM8 Uniprot:Q9LMM8
Length = 247
Score = 102 (41.0 bits), Expect = 0.00089, P = 0.00089
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAII 47
+GRR+++ ++ ES +VTF KRR+GL KK SEL TLC I+
Sbjct: 6 LGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIV 52
>TAIR|locus:2043600 [details] [associations]
symbol:AGL6 "AT2G45650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0048437 "floral organ development" evidence=IMP] [GO:0009911
"positive regulation of flower development" evidence=IMP]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009911 eggNOG:COG5068
GO:GO:0010228 SUPFAM:SSF55455 EMBL:M55554 EMBL:AC003680
IPI:IPI00531522 PIR:F39534 RefSeq:NP_182089.1 UniGene:At.512
ProteinModelPortal:P29386 SMR:P29386 IntAct:P29386 STRING:P29386
EnsemblPlants:AT2G45650.1 GeneID:819173 KEGG:ath:AT2G45650
GeneFarm:3546 TAIR:At2g45650 InParanoid:P29386 KO:K09264
OMA:KERQLGD PhylomeDB:P29386 ProtClustDB:CLSN2913049
Genevestigator:P29386 GO:GO:0048437 Uniprot:P29386
Length = 252
Score = 102 (41.0 bits), Expect = 0.00093, P = 0.00093
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS 50
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II +S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSS 50
>TAIR|locus:2193922 [details] [associations]
symbol:AT1G72350 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AC016529
EMBL:AY141235 EMBL:DQ446421 EMBL:BT025647 IPI:IPI00525774
PIR:D96747 RefSeq:NP_177379.1 UniGene:At.64898
ProteinModelPortal:Q9C9D4 SMR:Q9C9D4 EnsemblPlants:AT1G72350.1
GeneID:843567 KEGG:ath:AT1G72350 TAIR:At1g72350 InParanoid:Q9C9D4
OMA:NEMAMAD PhylomeDB:Q9C9D4 ProtClustDB:CLSN2679559
ArrayExpress:Q9C9D4 Genevestigator:Q9C9D4 Uniprot:Q9C9D4
Length = 224
Score = 101 (40.6 bits), Expect = 0.00099, P = 0.00099
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCG 40
GR++++ + I E+ R+VTF KRR+GL KK +EL+ LCG
Sbjct: 43 GRQKIEIKEIMLETRRQVTFSKRRSGLFKKAAELSVLCG 81
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 177 163 0.00084 107 3 11 22 0.48 31
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 95
No. of states in DFA: 596 (63 KB)
Total size of DFA: 148 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.31u 0.15s 16.46t Elapsed: 00:00:00
Total cpu time: 16.32u 0.15s 16.47t Elapsed: 00:00:00
Start: Sat May 11 04:39:37 2013 End: Sat May 11 04:39:37 2013