BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040635
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana
GN=AGL80 PE=1 SV=1
Length = 321
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 2/155 (1%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R++V+ IS +S RK TFKKR+ GL KK+ EL+TLCG+TACAII + +D PE+WPS
Sbjct: 1 MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
+ RV+ +F P + K M++Q FL ++I+ E +R++RK +R LEM + QC
Sbjct: 61 NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120
Query: 121 LAGKDMNNFDC-LEDLKDLDHLLKEKIKVIADKIE 154
L G +M F + DL DL +++++ +K + +IE
Sbjct: 121 LIG-NMEMFHLNIVDLNDLGYMIEQYLKDVNRRIE 154
>sp|Q7XJK8|PHE2_ARATH MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana
GN=PHE2 PE=1 SV=1
Length = 278
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 3 RRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPA 62
+R+++ LI RK TF KR+ G+ KKL+EL TLCGV ACA++ + F+ PE WPS
Sbjct: 2 KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61
Query: 63 EAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMFTQCL 121
V+ KF + R K M++Q TF+S++I+ E+++K R +N ++ +LMF CL
Sbjct: 62 GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFG-CL 120
Query: 122 AGK-DMNNFDCLEDLKDLDHLLKEKIKVIADKIE 154
G+ ++ N D DL+DL + + + + +IE
Sbjct: 121 KGETNVYNLDG-RDLQDLSLYIDKYLNGLTRRIE 153
>sp|O80805|PHE1_ARATH MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana
GN=PHE1 PE=1 SV=1
Length = 279
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 3 RRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPA 62
R +++ I +SVRK TF KR+ G+ KK +EL TLCGV ACA+I + ++ E WPS
Sbjct: 2 RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61
Query: 63 EAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEM-DLMFTQCL 121
V+ KF F + R K M++Q TFL ++I+ ER++K R +NR ++ DLMF CL
Sbjct: 62 GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFG-CL 120
Query: 122 AGK-DMNNFDCLEDLKDLDHLLKEKIKVIADKIE 154
G+ D+++ DL DL+ L + + + ++E
Sbjct: 121 KGEVDVSHLHG-RDLLDLNVFLNKYLNGVIRRVE 153
>sp|Q7XJK6|AGL36_ARATH Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana
GN=AGL36 PE=1 SV=1
Length = 366
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 4 RRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAE 63
++V+ LI+ E RK +F KR+ G+ KKL EL+TLCGV ACA+I + F PE WPS
Sbjct: 2 KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61
Query: 64 AVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLAG 123
A +V +F P R K MM+Q T+L ++I+ E+++ +NR L++ C+ G
Sbjct: 62 AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121
Query: 124 K-DMNNFDCLEDLKDLDHLLKEKIKVIADKIE 154
K ++D +DL+DL + + + +IE
Sbjct: 122 KMSQYHYDA-KDLQDLQSCINLYLDQLNGRIE 152
>sp|Q7XJK5|AGL90_ARATH Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana
GN=AGL90 PE=1 SV=2
Length = 320
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Query: 4 RRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAE 63
++V+ LI+ E RK +F KR+ G+ KKL EL+TLCGV ACA+I + F PE WPS
Sbjct: 2 KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61
Query: 64 AVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLAG 123
A +V KF P R + MM+Q T L ++I+ E+++ +NR L++ C+ G
Sbjct: 62 AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121
Query: 124 KDMNNFDCLEDLKDLDHLL 142
K M+ + D KDL LL
Sbjct: 122 K-MSQYRY--DAKDLQDLL 137
>sp|Q9C6V3|AGL86_ARATH Agamous-like MADS-box protein AGL86 OS=Arabidopsis thaliana
GN=AGL86 PE=1 SV=1
Length = 339
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 3 RRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPA 62
R +++ LI+ ++ R+ TF+KR+ G+ KL ELTTLCGV ACA+I + +++ P +WPS
Sbjct: 2 RSKIKLSLIANKTSRRTTFRKRKGGITNKLHELTTLCGVKACAVISSPYEN-PVVWPSTE 60
Query: 63 EAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLA 122
+ F P + K MM+ T+L KI+ +++ R++NR ++ C+
Sbjct: 61 GVQEAVSMFMERPATEQSKLMMSHETYLQDKITKETKKLESLRRENRESQLRQFMFDCVE 120
Query: 123 GKDMNNFDCLEDLKDL----DHLLKE 144
GK + DL+DL DH + +
Sbjct: 121 GKMSEHQYGARDLQDLSLYIDHYINQ 146
>sp|Q9C6V4|AGL92_ARATH Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana
GN=AGL92 PE=1 SV=1
Length = 464
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 10 LISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPSPAEAVRVLD 69
LI R+ TF+KR AG++KKL ELTTLC + ACA+I + F++ P +WPS V+
Sbjct: 9 LIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFEN-PTVWPSTEGVQEVIS 67
Query: 70 KFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQCLAGKDMNNF 129
+F P R K MM+ TFL +I+ ++ R++NR ++ C+ GK
Sbjct: 68 EFMEKPATERSKTMMSHETFLRDQITKEQNKLESLRRENRETQLKHFMFDCVGGKMSEQQ 127
Query: 130 DCLEDLKDL 138
DL+DL
Sbjct: 128 YGARDLQDL 136
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
+GR+++ I KES R+VTF KRRAGL KK SEL TLCG II S +P +
Sbjct: 62 IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCG-AEIGIIVFSPAKKPFSFGH 120
Query: 61 PAEAVRVLDKF---NNFPIKRRGKYMMNQNTF--LSKKISNLFERMRKERKKNRGLE 112
P+ VLD++ NN + + + + L+ +++++ + +E+KK + +E
Sbjct: 121 PS-VESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAME 176
>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
GN=MADS20 PE=2 SV=2
Length = 233
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +VQ I E R+VTF KRR GL KK E+ LC V AI+ ++ + S
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKIS-------NLFERMRKERKKNRGLEM 113
R+L+K++ + G ++ + L +S E ++K ++ G E+
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
Query: 114 DLMFTQ 119
D + Q
Sbjct: 121 DSLTLQ 126
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I S R+VT+ KRR G+ KK E++ LC II AS E S
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF--S 58
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
V +LD+++ +R L K NL + K +K N ++++L +
Sbjct: 59 STSLVDILDQYHKLTGRR----------LLDAKHENLDNEINKVKKDNDNMQIEL---RH 105
Query: 121 LAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKIECEMGLKSI 162
L G ED+ L+H ++ ++ D +E GL SI
Sbjct: 106 LKG---------EDITSLNH---RELMILEDALEN--GLTSI 133
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAQEISVLCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRR 79
+E+ +VL+++ + R
Sbjct: 58 TSESCMEKVLERYERYSYAER 78
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1
Length = 254
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRK-----ERKKNRGLEM 113
++ ++L+++ + R ++ + ++ S + R++ ER + L
Sbjct: 58 STDSCMEKILERYERYSYAERQ--LIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGE 115
Query: 114 DLMFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKI 153
DL Q ++ K++ N + D L H+ K +++ D I
Sbjct: 116 DL---QAMSSKELQNLEQQLDTA-LKHIRSRKNQLMHDSI 151
>sp|Q07472|MADS1_PETHY Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2
SV=1
Length = 231
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R ++Q + I ++ R+VT+ KRR GL KK +ELT LC I+ +S E
Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISP 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
++ D + K G + N + + E++RK ++ NR L ++ +
Sbjct: 61 SITTKQLFDLYQ----KTVGVDLWNSH------YEKMQEQLRKLKEVNRNLRKEI---RQ 107
Query: 121 LAGKDMN--NFDCLEDL-KDLDHLLK----EKIKVIADKIEC 155
G+ +N N++ LE+L +++D+ LK K KVI ++IE
Sbjct: 108 RMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIET 149
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYM--MNQNTFLSKKISNLFERMR-KERKKNRGLEMDL 115
++ ++L+++ + R + NT S + + L ++ ER + L DL
Sbjct: 58 STDSCMEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDL 117
Query: 116 MFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKI 153
Q ++ K++ N + D L H+ K +++ D I
Sbjct: 118 ---QAMSPKELQNLEQQLDTA-LKHIRSRKNQLMYDSI 151
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYM--MNQNTFLSKKISNLFERMR-KERKKNRGLEMDL 115
++ ++L+++ + R + NT S + + L ++ ER + L DL
Sbjct: 58 STDSCMEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDL 117
Query: 116 MFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKI 153
Q ++ K++ N + D L H+ K +++ D I
Sbjct: 118 ---QAMSPKELQNLEQQLDTA-LKHIRSRKNQLMYDSI 151
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYM--MNQNTFLSKKISNLFERMR-KERKKNRGLEMDL 115
++ ++L+++ + R + NT S + + L ++ ER + L DL
Sbjct: 58 STDSCMEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDL 117
Query: 116 MFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKI 153
Q ++ K++ N + D L H+ K +++ D I
Sbjct: 118 ---QAMSPKELQNLEQQLDTA-LKHIRSRKNQLMYDSI 151
>sp|P29382|SEP1_ARATH Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1
PE=1 SV=2
Length = 251
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 33/187 (17%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR RV+ + I + R+VTF KRR GL KK EL+ LC II F ++ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII---FSNRGKLYEF 57
Query: 60 -SPAEAVRVLDKF----------NNFP-----------IKRRGKY---MMNQNTFLSKKI 94
S + ++ LD++ NN P +K +G+Y Q L + +
Sbjct: 58 CSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDL 117
Query: 95 SNLFERMRKERKKNRGLEMDLMFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKIE 154
L + ++ ++ ++D Q + K D L DL++ + +L E + +A K++
Sbjct: 118 GPLNSKELEQLER----QLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLD 173
Query: 155 CEMGLKS 161
+G++S
Sbjct: 174 DMIGVRS 180
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I S R+VT+ KRR G+ KK E++ LC II AS E S
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF--S 58
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
V +LD+++ +R K NL + K +K N ++++L +
Sbjct: 59 STSLVDILDQYHKLTGRR----------LWDAKHENLDNEINKVKKDNDNMQIEL---RH 105
Query: 121 LAGKDMNNFDCLE 133
L G+D+ + + E
Sbjct: 106 LKGEDITSLNHRE 118
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 33/135 (24%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICA------SFDHQP 55
GR++++ + ES +VTF KRR+GL KK SEL TLCG ++ + SF H
Sbjct: 7 GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGH-- 64
Query: 56 EIWPSPAEAVRVLDKF-NNFPIK------------RRGKYMMNQNTFLSKKISNL----- 97
V+D+F NN P+ RR + + N L++ +S L
Sbjct: 65 ------PNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKK 118
Query: 98 -FERMRKERKKNRGL 111
++ ++K R+K + L
Sbjct: 119 KYDELKKIREKTKAL 133
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRK-----ERKKNRGLEM 113
++ ++L+++ + R ++ + ++ S + R++ ER + L
Sbjct: 58 STDSCMEKILERYERYSYAERQ--LIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGE 115
Query: 114 DLMFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKI 153
DL Q ++ K++ N + D L H+ K +++ D +
Sbjct: 116 DL---QAMSPKELQNLEQQLDTA-LKHIRSRKNQLMYDSV 151
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRK-----ERKKNRGLEM 113
++ ++L+++ + R ++ + ++ S + R++ ER + L
Sbjct: 58 STDSCMEKILERYERYSYAERQ--LIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGE 115
Query: 114 DLMFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKI 153
DL Q ++ K++ N + D L H+ K +++ D +
Sbjct: 116 DL---QAMSPKELQNLEQQLDTA-LKHIRSRKNQLMYDSV 151
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRK-----ERKKNRGLEM 113
++ ++L+++ + R ++ + ++ S + R++ ER + L
Sbjct: 58 STDSCMEKILERYERYSYAERQ--LIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGE 115
Query: 114 DLMFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKI 153
DL Q ++ K++ N + D L H+ K +++ D +
Sbjct: 116 DL---QAMSPKELQNLEQQLDTA-LKHIRSRKNQLMYDSV 151
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRR+GL KK E++ LC I+ F + +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIV---FSSKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFT 118
++ R+L++++ +Y+ + + + +S + + K +E+
Sbjct: 58 STDSCMERILERYD--------RYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNK 109
Query: 119 QCLAGKDMNNFDCLEDLKDLDHLLKEKIKVI 149
+ G+D+++ L++L+ L+H L IK I
Sbjct: 110 RNFMGEDLDSL-SLKELQSLEHQLDAAIKSI 139
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRK-----ERKKNRGLEM 113
++ ++L+++ + R ++ + ++ S + R++ ER + L
Sbjct: 58 STDSCMEKILERYERYSYAERQ--LIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGE 115
Query: 114 DLMFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKI 153
DL Q ++ K++ N + D L H+ K +++ D +
Sbjct: 116 DL---QAMSPKELQNLEQQLDTA-LKHIRSRKNQLMYDSV 151
>sp|Q6R4R9|CALA_BRAOB Truncated transcription factor CAULIFLOWER A OS=Brassica oleracea
var. botrytis GN=CAL-A PE=2 SV=2
Length = 150
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFP 75
+E+ +VL+++ +
Sbjct: 58 SSESCMEKVLERYERYS 74
>sp|Q6R4R6|CALD_BRAOB Truncated transcription factor CAULIFLOWER D OS=Brassica oleracea
var. botrytis GN=CAL-D PE=2 SV=1
Length = 148
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFP 75
+E+ +VL+++ +
Sbjct: 58 SSESCMEKVLERYERYS 74
>sp|Q12224|RLM1_YEAST Transcription factor RLM1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RLM1 PE=1 SV=1
Length = 676
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS 50
MGRR+++ + IS + R VTF KR+AGL KK EL+ LC V II S
Sbjct: 1 MGRRKIEIQRISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIILGS 50
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I S R+VT+ KRR G+ KK E++ LC II AS E
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
V +LD ++ KR K +L + + +K+N ++++L +
Sbjct: 61 STTLVDMLDHYHKLSGKR----------LWDPKHEHLDNEINRVKKENDSMQIEL---RH 107
Query: 121 LAGKDMNNFDCLE 133
L G+D+ + E
Sbjct: 108 LKGEDITTLNYKE 120
>sp|P38128|SMP1_YEAST Transcription factor SMP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SMP1 PE=1 SV=1
Length = 452
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICAS 50
MGRR+++ E I + R VTF KR+AGL KK EL+ LC V II S
Sbjct: 1 MGRRKIEIEPIKDDRNRTVTFIKRKAGLFKKAHELSVLCQVDIAVIILGS 50
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I + R+VTF KRR+G+ KK E++ LC +I +S +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
R+L+K+ GK + ++ K +S +R++KE N ++++L +
Sbjct: 61 KTSLSRILEKYQT----NSGKILWDEK---HKSLSAEIDRIKKE---NDNMQIEL---RH 107
Query: 121 LAGKDMNNF 129
L G+D+N+
Sbjct: 108 LKGEDLNSL 116
>sp|Q6R4R8|CALB_BRAOB Truncated transcription factor CAULIFLOWER B OS=Brassica oleracea
var. botrytis GN=CAL-B PE=2 SV=1
Length = 150
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEVSILCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFP 75
+E+ +VL+++ +
Sbjct: 58 SSESCMEKVLERYERYS 74
>sp|Q54TY7|SRFA_DICDI Serum response factor homolog A OS=Dictyostelium discoideum GN=srfA
PE=1 SV=1
Length = 418
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDH 53
GRR+++ E I +S R +TF KR+AG+ KK EL+TL G ++ + H
Sbjct: 68 GRRKIKIEFIDDKSRRHITFSKRKAGIMKKAYELSTLTGTQVLLLVASETGH 119
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
chinensis GN=CAL PE=2 SV=1
Length = 254
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNF 74
+E+ +VL+++ +
Sbjct: 58 SSESCMEKVLERYERY 73
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2
SV=1
Length = 254
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNF 74
+E+ +VL+++ +
Sbjct: 58 SSESCMEKVLERYERY 73
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
pekinensis GN=CAL PE=2 SV=1
Length = 254
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNF 74
+E+ +VL+++ +
Sbjct: 58 SSESCMEKVLERYERY 73
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRR 79
++ ++L+++ + R
Sbjct: 58 STDSCMEKILERYERYSYAER 78
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRR 79
++ ++L+++ + R
Sbjct: 58 STDSCMEKILERYERYSYAER 78
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 26/158 (16%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRR GL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRRG----KYMMNQNTFLSKKISNL---FERMRKERKKNRGL 111
+E+ +VL+++ + R +N T S + S L E + + ++ G
Sbjct: 58 SSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGE 117
Query: 112 EMDLMFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVI 149
E++ M L+DL++L+ L+ +K I
Sbjct: 118 ELEPM--------------SLKDLQNLEQQLETALKHI 141
>sp|Q6R4R7|CALC_BRAOB Truncated transcription factor CAULIFLOWER C OS=Brassica oleracea
var. botrytis GN=CAL-C PE=2 SV=1
Length = 148
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFP 75
+E+ +VL+++ +
Sbjct: 58 SSESCMEKVLERYERYS 74
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRR+GL KK E++ LC +I +S E + +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFE-YST 59
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
+ ++L++++ +Y+ + + + IS + + K +E+ +
Sbjct: 60 DSCMEKILERYD--------RYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRN 111
Query: 121 LAGKDMNNFDCLEDLKDLDHLLKEKIKVI 149
G+D+++ L++L+ L+H L IK I
Sbjct: 112 FMGEDLDSL-SLKELQSLEHQLHAAIKSI 139
>sp|Q54RY6|SRFB_DICDI Serum response factor homolog B OS=Dictyostelium discoideum
GN=srfB PE=3 SV=1
Length = 467
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 2 GRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDH 53
GRR++ E I +S R +TF KR++G+ KK EL+TL G I+ + H
Sbjct: 37 GRRKINIEFIGDKSRRHITFSKRKSGIMKKAYELSTLTGTQVLLIVASETGH 88
>sp|P23706|DEFA_ANTMA Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1
SV=1
Length = 227
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
M R ++Q + I ++ R+VT+ KRR GL KK EL+ LC I+ +S E + S
Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHE-YIS 59
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKK----NRGLEMDLM 116
P A + L F+ + Q S+ +E+M++ KK NR L ++
Sbjct: 60 PTTATKQL--FDQY-----------QKAVGVDLWSSHYEKMQEHLKKLNEVNRNLRREIR 106
Query: 117 FTQCLAGKDMNNFDCLEDLKDLDHLLK----EKIKVIADKIEC 155
+ D+ + ++D+D+ LK K KVI+++I+
Sbjct: 107 QRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDT 149
>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
SV=1
Length = 256
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRR 79
++ ++L+++ + R
Sbjct: 58 STDSCMEKILERYERYSYAER 78
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 18/158 (11%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I ++ R+VTF KRRAGL KK EL+ LC II +S E
Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQ 63
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
P +++ ++ ++ G + ++ + L++ + K R+ L++ L Q
Sbjct: 64 PHSMSQIISRY----LQTTGASLPVEDNRV-----QLYDEVAKMRRDTLNLQLSL---QR 111
Query: 121 LAGKDMN--NFDCLEDL-KDLDHLLKEKIKVIADKIEC 155
G D++ ++ L +L K L+H L K+ A K+E
Sbjct: 112 YKGDDLSLAQYEELNELEKQLEHALN---KIRARKLEL 146
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +++ + I + R VTF KRR GL KK E+T LC II AS +
Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60
Query: 61 PAEAVRVLDKFNNFPIKRRGKYMMNQNTFLSKKISNLFERMRKERKKNRGLEMDLMFTQC 120
+ +LD++ GK + + + +SN +R++KE N L+++L +
Sbjct: 61 SMDLGAMLDQYQKLS----GKKLWDAK---HENLSNEIDRIKKE---NDSLQLEL---RH 107
Query: 121 LAGKDMNNFDCLEDLKDLDHLLKEKIKVIAD 151
L G+D+ + + L++L ++H ++ + + D
Sbjct: 108 LKGEDIQSLN-LKNLMAVEHAIEHGLDKVRD 137
>sp|P29384|SEP2_ARATH Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2
PE=1 SV=1
Length = 250
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 33/186 (17%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWP- 59
MGR RV+ + I + R+VTF KRR GL KK EL+ LC I+ F ++ +++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIV---FSNRGKLYEF 57
Query: 60 -SPAEAVRVLDKF----------NNFP-----------IKRRGKY---MMNQNTFLSKKI 94
S + ++ L+++ NN P +K +G+Y Q L + +
Sbjct: 58 CSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDL 117
Query: 95 SNLFERMRKERKKNRGLEMDLMFTQCLAGKDMNNFDCLEDLKDLDHLLKEKIKVIADKIE 154
L + ++ + R L+ L +C+ + M D L DL+ +H+L + + ++ K+E
Sbjct: 118 GPLNSKELEQLE--RQLDGSLKQVRCIKTQYM--LDQLSDLQGKEHILLDANRALSMKLE 173
Query: 155 CEMGLK 160
+G++
Sbjct: 174 DMIGVR 179
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana
GN=AGL3 PE=2 SV=2
Length = 258
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR +V+ + I + R+VTF KRR GL KK EL+ LC +I ++ E S
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 61 PAEAVRVLDKF 71
P+ R +DK+
Sbjct: 61 PSGMARTVDKY 71
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var.
italica GN=CAL PE=2 SV=1
Length = 251
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRRAGL KK E++ LC I+ F H+ +++
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNF 74
+E+ +VL+ + +
Sbjct: 58 SSESCMEKVLEHYERY 73
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RVQ + I + R+VTF KRRAGL KK E++ LC ++ F H+ +++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVV---FSHKGKLFEY 57
Query: 61 PAEAV--RVLDKFNNFPIKRR 79
+ ++L+++ + R
Sbjct: 58 STDPCMEKILERYERYSYAER 78
>sp|Q84NC2|MAD31_ORYSJ MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica
GN=MADS31 PE=2 SV=1
Length = 178
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 1 MGRRRVQHELISKESVRKVTFKKRRAGLKKKLSELTTLCGVTACAIICASFDHQPEIWPS 60
MGR RV+ + I + R+VTF KRR GL KK +EL LC I+ + E
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 PAEAVRVLDKFNNFPIKR 78
P + D++ P R
Sbjct: 61 PWRIANIFDRYLKAPSTR 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,165,478
Number of Sequences: 539616
Number of extensions: 2565664
Number of successful extensions: 7367
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7176
Number of HSP's gapped (non-prelim): 195
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)