Query 040637
Match_columns 453
No_of_seqs 198 out of 1629
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 10:20:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040637.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040637hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15098 beta-D-glucoside gluc 100.0 9.7E-73 2.1E-77 626.9 34.3 351 19-435 31-432 (765)
2 PLN03080 Probable beta-xylosid 100.0 8.2E-69 1.8E-73 595.3 28.8 372 11-434 38-441 (779)
3 COG1472 BglX Beta-glucosidase- 100.0 1.1E-63 2.4E-68 517.6 25.0 331 33-440 1-377 (397)
4 PF00933 Glyco_hydro_3: Glycos 100.0 4.7E-59 1E-63 466.8 20.5 258 34-356 1-299 (299)
5 PRK05337 beta-hexosaminidase; 100.0 4.5E-47 9.7E-52 386.4 23.1 241 50-359 16-308 (337)
6 CHL00162 thiG thiamin biosynth 65.7 31 0.00068 34.7 8.3 90 207-340 147-242 (267)
7 PF05690 ThiG: Thiazole biosyn 62.7 19 0.00041 35.9 6.1 89 209-341 135-229 (247)
8 PLN03007 UDP-glucosyltransfera 53.5 59 0.0013 35.2 8.6 124 220-354 286-438 (482)
9 COG2022 ThiG Uncharacterized e 43.2 67 0.0015 32.1 6.3 86 211-340 144-235 (262)
10 PRK13396 3-deoxy-7-phosphohept 43.1 84 0.0018 33.0 7.5 99 259-366 239-347 (352)
11 cd04728 ThiG Thiazole synthase 40.3 1.3E+02 0.0028 30.2 7.9 83 212-340 138-228 (248)
12 PRK11840 bifunctional sulfur c 39.5 1.2E+02 0.0026 31.6 7.8 85 211-340 211-302 (326)
13 COG0313 Predicted methyltransf 38.9 85 0.0019 31.9 6.5 85 243-340 43-127 (275)
14 cd00938 HisRS_RNA HisRS_RNA bi 38.4 64 0.0014 24.1 4.1 31 331-361 12-42 (45)
15 PRK08673 3-deoxy-7-phosphohept 37.2 65 0.0014 33.6 5.6 94 259-361 231-333 (335)
16 PRK00208 thiG thiazole synthas 36.7 1.7E+02 0.0036 29.5 8.0 83 212-340 138-228 (250)
17 PLN00164 glucosyltransferase; 35.0 72 0.0016 34.6 5.7 71 283-354 339-429 (480)
18 PLN02210 UDP-glucosyl transfer 33.9 1.1E+02 0.0023 33.1 6.8 126 219-354 269-413 (456)
19 PF12100 DUF3576: Domain of un 32.8 23 0.0005 30.8 1.2 18 276-293 21-38 (103)
20 PLN02764 glycosyltransferase f 32.0 93 0.002 33.7 6.0 73 283-355 317-406 (453)
21 PLN00414 glycosyltransferase f 32.0 95 0.0021 33.5 6.0 73 283-355 312-401 (446)
22 PF13653 GDPD_2: Glycerophosph 29.6 37 0.00081 23.0 1.6 17 210-226 12-28 (30)
23 PF09851 SHOCT: Short C-termin 28.4 1.2E+02 0.0026 20.4 3.9 27 328-354 4-30 (31)
24 TIGR03586 PseI pseudaminic aci 28.0 1.3E+02 0.0028 31.3 5.9 104 269-398 179-283 (327)
25 PLN02173 UDP-glucosyl transfer 27.3 4.3E+02 0.0094 28.6 10.0 124 220-355 265-407 (449)
26 TIGR00608 radc DNA repair prot 27.0 1.1E+02 0.0025 29.8 5.1 90 139-249 99-191 (218)
27 PLN02670 transferase, transfer 26.4 95 0.0021 33.8 4.8 126 219-355 278-428 (472)
28 TIGR01334 modD putative molybd 26.3 2.2E+02 0.0048 28.9 7.2 18 305-322 198-215 (277)
29 PLN02208 glycosyltransferase f 26.1 1.8E+02 0.004 31.2 6.9 73 283-355 311-400 (442)
30 PLN02554 UDP-glycosyltransfera 25.6 1.3E+02 0.0029 32.5 5.8 69 283-355 343-439 (481)
31 PLN03015 UDP-glucosyl transfer 25.0 1.9E+02 0.0042 31.5 6.9 71 284-355 336-425 (470)
32 PLN02410 UDP-glucoronosyl/UDP- 24.8 1.8E+02 0.0038 31.4 6.5 126 220-355 265-409 (451)
33 COG2003 RadC DNA repair protei 23.4 61 0.0013 32.0 2.4 66 171-252 133-200 (224)
34 PLN03004 UDP-glycosyltransfera 22.8 2.2E+02 0.0048 30.8 6.8 127 219-355 270-423 (451)
35 PF09373 PMBR: Pseudomurein-bi 22.5 1.4E+02 0.0029 20.4 3.3 26 338-363 2-27 (33)
36 PRK00024 hypothetical protein; 21.7 1.3E+02 0.0029 29.3 4.5 90 138-248 104-196 (224)
37 PF04002 RadC: RadC-like JAB d 21.2 1.4E+02 0.0029 26.3 4.0 65 168-248 29-95 (123)
38 PRK13533 7-cyano-7-deazaguanin 20.4 1.1E+02 0.0023 33.7 3.8 38 284-321 83-121 (487)
39 PHA03392 egt ecdysteroid UDP-g 20.3 8.5E+02 0.018 26.7 10.8 128 212-355 288-431 (507)
40 PF08044 DUF1707: Domain of un 20.3 1.4E+02 0.0031 22.6 3.4 34 326-359 9-42 (53)
41 PLN02534 UDP-glycosyltransfera 20.1 2.3E+02 0.005 31.0 6.3 73 283-355 344-443 (491)
No 1
>PRK15098 beta-D-glucoside glucohydrolase; Provisional
Probab=100.00 E-value=9.7e-73 Score=626.90 Aligned_cols=351 Identities=33% Similarity=0.539 Sum_probs=299.9
Q ss_pred CCCHHHHHHHHHhcCCHHHHHhcccCcccch-----hhHHhhhcCCcceEEeCCCCCCCCCCCHHHHHHHHHHHHHHhh-
Q 040637 19 KQRVAVRVKDLLGRMSLEEKIGQMVQIDRTI-----ATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSL- 92 (453)
Q Consensus 19 ~~~~~~rv~~ll~~MTleEKigQl~~~~~~~-----~~~~~l~~~~iGgv~~~~~~~p~~~~~~~~~~~~i~~~q~~a~- 92 (453)
..+.++|+++++++||+|||||||++++..+ ...+.++++++|+|+.. .++++ ++.+|+.+.
T Consensus 31 ~~~~~~~v~~ll~~MtleEKvgQl~~~~~~~~~~~~~~~~~i~~~~vGgv~n~--------~~~~~----~~~lq~~~~~ 98 (765)
T PRK15098 31 PEARDAFVTDLLKKMTLDEKIGQLRLISVGPDNPKEAIREMIKAGQVGAIFNT--------VTRQD----IRAMQDQVMQ 98 (765)
T ss_pred CcCHHHHHHHHHHcCCHHHHHhhhcccccCCCCchHHHHHHHHhCCcceEEcC--------cCHHH----HHHHHHHHhh
Confidence 3578999999999999999999999875322 34567899999999622 23333 456676655
Q ss_pred hhccCCCcEEEeecCCCcccccccccCCcc-------------------------------------ccCCCCccccCcc
Q 040637 93 ASRLGIPMIYGIDAVHGHNNVYNATIFPHN-------------------------------------VCRDPRWGRCYES 135 (453)
Q Consensus 93 ~~~~~iP~~~~~D~e~G~~~~~~~t~fP~~-------------------------------------v~rdp~~GR~~es 135 (453)
.++++||+++++|+|||.+ |.||++ +.|||+|||++||
T Consensus 99 ~~~~giP~li~~D~e~G~~-----t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gin~~laPv~Dv~r~p~~gr~~rs 173 (765)
T PRK15098 99 LSRLKIPLFFAYDVVHGQR-----TVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASEG 173 (765)
T ss_pred CCCCCCCeeEEEeCCCCcc-----ccCChHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCEEeeCcccccCCCCccccccC
Confidence 4788999999999999973 667766 7999999999999
Q ss_pred CCCCHHHHHHHHH-HHhhccCCCCCCCCCCccccCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHh
Q 040637 136 YSEDHKIVQEMTD-VILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDS 214 (453)
Q Consensus 136 fgeDp~lv~~~~~-~i~Glq~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~ 214 (453)
|||||++|++|+. +|+|||+.+..+ +.||++|+|||||||.++.++|.....+++++|++.||+||+++
T Consensus 174 fgeDP~lv~~~~~a~v~GlQ~~~~~~----------~~gV~a~~KHFpG~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~a 243 (765)
T PRK15098 174 FGEDTYLTSIMGKTMVKAMQGKSPAD----------RYSVMTSVKHFALYGAVEGGRDYNTVDMSPQRMFNDYLPPYKAG 243 (765)
T ss_pred cCCCHHHHHHHHHHHHHHHcCCCCCC----------CCCEEEECcEEeCCCCcccCccCccCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999 999999732211 25999999999999998888888777789999999999999999
Q ss_pred hhcCCceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccc
Q 040637 215 IIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGID 294 (453)
Q Consensus 215 i~~g~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~ 294 (453)
|++|+.+|||||+++||+|+|+|+++|+++||++|||+ |+|||||++|.
T Consensus 244 i~ag~~~VM~sy~~~~g~pa~~s~~ll~~lLR~e~GF~-------------------------------G~VvSD~~a~~ 292 (765)
T PRK15098 244 LDAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFK-------------------------------GITVSDHGAIK 292 (765)
T ss_pred HHhCCCEEEecccCcCCEeccCCHHHHHHHHHHhcCCC-------------------------------cEEEecchhHH
Confidence 99999999999999999999999999999999999999 99999999999
Q ss_pred cccCCC-CCChhHHHHHHHHcCCceeccCCChhhhHHHHHHHHhcCCCcHHHHHHHhhHHHHHHHHhCCCCCCCCCchh-
Q 040637 295 RITSPP-HSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSL- 372 (453)
Q Consensus 295 ~i~~~~-~~~~~~~~~~ai~AG~D~~~~~~~~~~~~~~l~~av~~g~i~~~rid~av~RIL~~K~~~Glf~~p~~~~~~- 372 (453)
.+..+. ..+..++++.||+||+||+|.+. .+.+.|.++|++|.|++++||+||+|||++|+++|||++||.+...
T Consensus 293 ~l~~~~~~~~~~ea~~~Al~AG~Dl~m~~~---~~~~~l~~av~~G~i~~~~id~av~RIL~~k~~~glf~~p~~~~~~~ 369 (765)
T PRK15098 293 ELIKHGVAADPEDAVRLALKSGIDMSMSDE---YYSKYLPGLVKSGKVTMAELDDAVRHVLNVKYDMGLFNDPYSHLGPK 369 (765)
T ss_pred HHHhcccCCCHHHHHHHHHHcCCCcccCch---hHHHHHHHHHHcCcCCHHHHHHHHHHHHHHHHHhCCCCCCccccccc
Confidence 876421 13567899999999999998643 2345689999999999999999999999999999999999854321
Q ss_pred -----hhhcccHHHHHHHHHHHHhceEEeecCCCCCCCCCCCCCCCCeEEEEccCCCcccccccCCcc
Q 040637 373 -----VNELGSQAHRDLAREAVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTI 435 (453)
Q Consensus 373 -----~~~~~~~~h~~la~~~a~~SivLLKN~~~~~~~~LPL~~~~~kIaViG~~a~~~~~~~gg~t~ 435 (453)
...+.+++|+++|+++|++||||||| ++++|||+++ +||+|+||+|++...++|||+.
T Consensus 370 ~~~~~~~~~~~~~~~~~a~~~a~~sivLLKN----~~~~LPL~~~-~~IaviG~~a~~~~~~~G~~s~ 432 (765)
T PRK15098 370 ESDPVDTNAESRLHRKEAREVARESLVLLKN----RLETLPLKKS-GTIAVVGPLADSQRDVMGSWSA 432 (765)
T ss_pred cccccccccCCHHHHHHHHHHHHhcEEEEec----CCCCCCCCCC-CEEEEECCCcccccccCCCccc
Confidence 12345789999999999999999999 6679999865 6999999999998778999873
No 2
>PLN03080 Probable beta-xylosidase; Provisional
Probab=100.00 E-value=8.2e-69 Score=595.27 Aligned_cols=372 Identities=23% Similarity=0.358 Sum_probs=284.8
Q ss_pred CcCCCCCCCCCHHHHHHHHHhcCCHHHHHhcccCc----ccchhhHH-hhhcCCcceEE-------------eCCCCCCC
Q 040637 11 EYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQI----DRTIATVQ-FLKDYSIGSVL-------------SGGGSTPL 72 (453)
Q Consensus 11 ~~~~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~----~~~~~~~~-~l~~~~iGgv~-------------~~~~~~p~ 72 (453)
..+||||+++++++|+++||++||+|||++||... .+.+...- ++.+. +.|+. .....||.
T Consensus 38 ~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~~~~~d~-~hGv~~~~~g~~~~~g~~~~aT~FP~ 116 (779)
T PLN03080 38 SAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSES-LHGLADNGPGVSFNSGPVSAATSFPQ 116 (779)
T ss_pred cCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCccceeccc-ccccccCCCccccccCCCCCceECch
Confidence 45899999999999999999999999999999632 22221111 12221 11111 12235677
Q ss_pred CCCCHHHHHHHH-HHHHHH-hhhhccCCCcEEEeecCCCcccccccccCCccccCCCCccccCccCCCCHHHHHHHHH-H
Q 040637 73 PQASAADWINMI-NDFQRG-SLASRLGIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTD-V 149 (453)
Q Consensus 73 ~~~~~~~~~~~i-~~~q~~-a~~~~~~iP~~~~~D~e~G~~~~~~~t~fP~~v~rdp~~GR~~esfgeDp~lv~~~~~-~ 149 (453)
+...+++|+..+ .++-+. +.+.|.. +....+|+. .+++.+ ++.|||+|||++|||||||+++++|+. +
T Consensus 117 ~i~laAt~d~~L~~~~g~~ig~E~ra~-----g~~~~~G~~-~~aP~v---di~rdPrwGR~~EtfGEDP~lv~~~a~a~ 187 (779)
T PLN03080 117 VILSAASFNRSLWRAIGSAIAVEARAM-----YNAGQAGLT-FWAPNI---NIFRDPRWGRGQETPGEDPAVASAYSVEF 187 (779)
T ss_pred HHhhhhcCCHHHHHHHHHHHHHHHHhh-----ccccccCcc-eeeccc---ccccCCCcCccccCcCCCHHHHHHHHHHH
Confidence 778999997543 333222 2222211 111112433 244443 689999999999999999999999999 9
Q ss_pred HhhccCCCCCCCCCCccccCCCCceeeeecccccCCCccc---CCcCCCCccChhHHHhccChhhHHhhhcC-CceEEEe
Q 040637 150 ILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTN---GINENNTVIDMHGLLSIHMPAYSDSIIKG-VSTIMVS 225 (453)
Q Consensus 150 i~Glq~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~---~~~~~~~~v~~~~l~~~~l~pF~~~i~~g-~~~iM~s 225 (453)
|+|||+.+.++.+... -.|..+|+||+||||||+.++. +++..++.+++++|+|+||+||+.+|++| +.+||||
T Consensus 188 V~GlQ~~~~~~~~~~~--~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L~e~yl~PF~~ai~~g~~~~VM~s 265 (779)
T PLN03080 188 VKGFQGGKWKKVRDDG--EDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCLMCS 265 (779)
T ss_pred HHHhcCCCcccccccc--cCCCceEEEECCeeeCCCccccCCccccCccCccCHHHHHhhhhHHHHHHHHhcCCeEEEeC
Confidence 9999973210000000 0011359999999999998764 34556677899999999999999999987 7899999
Q ss_pred ccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccccccCCCC--CC
Q 040637 226 YSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPH--SN 303 (453)
Q Consensus 226 y~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i~~~~~--~~ 303 (453)
||++||+|+|.|+++|+. ||+||||+ |+|||||++|..+...++ .+
T Consensus 266 Yn~vnG~Pa~~s~~lL~~-LR~ewGF~-------------------------------G~VvSD~~a~~~~~~~~~~~~~ 313 (779)
T PLN03080 266 YNQVNGVPACARKDLLQK-ARDEWGFQ-------------------------------GYITSDCDAVATIFEYQTYTKS 313 (779)
T ss_pred CcCcCCccccCCHHHHHH-HHHHhCcC-------------------------------CeEecchHHHHHhhhcccccCC
Confidence 999999999999999986 99999999 999999999998876544 25
Q ss_pred hhHHHHHHHHcCCceeccCCChhhhHHHHHHHHhcCCCcHHHHHHHhhHHHHHHHHhCCCCCCCCCch----hhhhcccH
Q 040637 304 YTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLS----LVNELGSQ 379 (453)
Q Consensus 304 ~~~~~~~ai~AG~D~~~~~~~~~~~~~~l~~av~~g~i~~~rid~av~RIL~~K~~~Glf~~p~~~~~----~~~~~~~~ 379 (453)
.++++..||+||+||+|.. .+.+.|.+||++|.|++++||+||+|||++|+++|+|++|..... ....++++
T Consensus 314 ~~ea~~~Al~AG~Dl~~~~----~~~~~l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~ 389 (779)
T PLN03080 314 PEDAVADVLKAGMDINCGS----YMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTK 389 (779)
T ss_pred HHHHHHHHHHcCCCcccCc----hhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCH
Confidence 6788999999999999853 245689999999999999999999999999999999997643211 12467899
Q ss_pred HHHHHHHHHHHhceEEeecCCCCCCCCCCCCCC-CCeEEEEccCCCcccccccCCc
Q 040637 380 AHRDLAREAVRKSLVLLKNGKNESHPLIPLPKK-APKILVAGSHADNLGYQCGGWT 434 (453)
Q Consensus 380 ~h~~la~~~a~~SivLLKN~~~~~~~~LPL~~~-~~kIaViG~~a~~~~~~~gg~t 434 (453)
+|+++|+|+|++||||||| ++++|||+++ .+||+||||+|++...++|||+
T Consensus 390 ~h~~lA~eaA~~siVLLKN----~~~~LPL~~~~~~~IaViGp~A~~~~~~~g~~~ 441 (779)
T PLN03080 390 EHRELALEAARQGIVLLKN----DKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYT 441 (779)
T ss_pred HHHHHHHHHHHhCEEEEec----CCCCCCCCCCCCCEEEEECCCCCCcCcCCCCCC
Confidence 9999999999999999999 6789999854 3799999999999988888875
No 3
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-63 Score=517.58 Aligned_cols=331 Identities=36% Similarity=0.549 Sum_probs=283.7
Q ss_pred CCHHHHHhcccCcccch--hhHHhhhcCCcceEEeCCCCCCCCCCCHHHHHHHHHHHHHHhhhhccCCCcEEEeecCCCc
Q 040637 33 MSLEEKIGQMVQIDRTI--ATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGH 110 (453)
Q Consensus 33 MTleEKigQl~~~~~~~--~~~~~l~~~~iGgv~~~~~~~p~~~~~~~~~~~~i~~~q~~a~~~~~~iP~~~~~D~e~G~ 110 (453)
||++||++||.+.+... ..........+||++++.. |..+.+++..++..++ ..|++||+++++|+|||.
T Consensus 1 m~~~~k~~ql~~~g~~~~~e~~~~~~~~~~~g~il~~~----n~~~~~~~~~~~~~~~----~~r~~iplli~~D~egG~ 72 (397)
T COG1472 1 MTLEEKVGQLGIAGLELTPEEAARLADPLVGGIILFGR----NIDDREQLRALVAAIR----EARLGIPLLIAIDQEGGR 72 (397)
T ss_pred CCccccceeeeccCccCCHHHHhhhhccCcceeEeecc----CccchHHHHHHHHHHh----hhccCCCeEEEEecCCCe
Confidence 79999999999886532 2233444556899887743 4556666554444433 347799999999999999
Q ss_pred ccccc--cccCCcc-------------------------------------ccCCCCccccCcc-CCCCHHHHHHHHH-H
Q 040637 111 NNVYN--ATIFPHN-------------------------------------VCRDPRWGRCYES-YSEDHKIVQEMTD-V 149 (453)
Q Consensus 111 ~~~~~--~t~fP~~-------------------------------------v~rdp~~GR~~es-fgeDp~lv~~~~~-~ 149 (453)
+++.+ .|.||.+ +.|||+|||.+|+ |||||++|+.|+. |
T Consensus 73 v~r~~~~~t~fP~~~alaa~~~~~la~~~g~~~A~Elra~Gin~~fAPvlDv~~~p~~~ri~ersfgeDP~lv~~l~~a~ 152 (397)
T COG1472 73 VQRLREGFTVFPAALALAATWDPELARKVGRVIAKELRALGINLDFAPVLDVARDPRWGRIGERSFGEDPELVALLAAAF 152 (397)
T ss_pred eeeccCCCCcCChhhhhhhcCCHHHHHHHHHHHHHHHHHcCCCccccceeecccCCCcCccccccCCCCHHHHHHHHHHH
Confidence 99865 6999988 7999999999988 9999999999999 9
Q ss_pred HhhccCCCCCCCCCCccccCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHhhhcC---CceEEEec
Q 040637 150 ILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKG---VSTIMVSY 226 (453)
Q Consensus 150 i~Glq~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~i~~g---~~~iM~sy 226 (453)
|+|||+ .||++|+|||||||.++.|+|..+..++++.|++.|++||+.+++++ +.++|++|
T Consensus 153 i~Glq~----------------~gv~at~KHFpGhG~~~~dsh~~~~~v~~~~L~e~~~~~f~~~~~~~~~~~mtahv~y 216 (397)
T COG1472 153 IKGLQG----------------AGVAATIKHFPGHGAVEGDSHYGLLPIDPRALRELYLPPFQPAIALGDDAAMTAHVAY 216 (397)
T ss_pred HHHHhh----------------CCceeeeccccCCCCCcCCcccccCCCChHHHHHhhccchHHHHHhccccceEEeeec
Confidence 999998 89999999999999999999998778899999999999999999999 89999999
Q ss_pred cCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccccccCCCCCChhH
Q 040637 227 SSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTY 306 (453)
Q Consensus 227 ~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i~~~~~~~~~~ 306 (453)
+++||.|||.|+++|+++||++|||+ |+|||||++|.++...++ +..+
T Consensus 217 ~~id~~Pat~s~~ll~diLR~~~GF~-------------------------------G~ViSD~~~m~~~~~~~g-~~~d 264 (397)
T COG1472 217 PKIDGTPATLSRKLLTDILRDEWGFD-------------------------------GVVISDDLSMKAIAAAHG-SAAD 264 (397)
T ss_pred cCCCCCcccCCHHHHHHHHHhccCCC-------------------------------eEEEeecchhHHHHHhcc-CHHH
Confidence 99999999999999999999999999 999999999998776533 3467
Q ss_pred HHHHHHHcCCceeccCCChhhhHHHHHHHHhcCCCcHHHHHHHhhHHHHHHHHhCCCCCCCCCchhhhhcccHHHHHHHH
Q 040637 307 SVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAR 386 (453)
Q Consensus 307 ~~~~ai~AG~D~~~~~~~~~~~~~~l~~av~~g~i~~~rid~av~RIL~~K~~~Glf~~p~~~~~~~~~~~~~~h~~la~ 386 (453)
.+..+++|||||+|+|.+..+.+..+..++. +++++|+++++|||++|+++|+|++|+.+ +|+++++
T Consensus 265 ~~~~al~AG~Di~l~~~~~~~~~~~~~~~~~---~~~~~i~~~v~Ril~~k~~~~~f~~~~~~----------~~~~~a~ 331 (397)
T COG1472 265 RAEAALKAGVDIVLVCNELYEAYLVVLELVG---LSEARLDDAVRRILRVKFKLGLFENPYSS----------EHRALAR 331 (397)
T ss_pred HHHHHHhcCCCEEecCCchhHHHHHHHHhcC---CcHHHHHHHHHHHHHHHHHhccccCCCch----------hhHHHHH
Confidence 7778999999999998875444444444444 99999999999999999999999999865 8999999
Q ss_pred HHHHhceEEeecCCCCCCCCCCCCCCCCeEEEEccCCCcccccccCCccccccC
Q 040637 387 EAVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGF 440 (453)
Q Consensus 387 ~~a~~SivLLKN~~~~~~~~LPL~~~~~kIaViG~~a~~~~~~~gg~t~~~~g~ 440 (453)
+++++|+||||| +..+|||+++.++|+|+||++++. . |||+ .|+..
T Consensus 332 ~~~~~~~~ll~n----~~~~~p~~~~~~~i~v~g~~~~~~-~--g~~~-~~~~~ 377 (397)
T COG1472 332 EAARESIVLLKN----DGGLLPLKKSAKRIAVIGPYADDG-D--GGWS-VGGVG 377 (397)
T ss_pred HHHHHHHHHHHh----ccCCCccccccCceEEEccccccC-C--CCee-eccCC
Confidence 999999999999 678999995556999999999997 4 8899 66543
No 4
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-xylosidase (3.2.1.37 from EC); N-acetyl beta-glucosaminidase (3.2.1.52 from EC); glucan beta-1,3-glucosidase (3.2.1.58 from EC); cellodextrinase (3.2.1.74 from EC); exo-1,3-1,4-glucanase (3.2.1 from EC). These enzymes are two-domain globular proteins that are N-glycosylated at three sites []. This domain is often N-terminal to the glycoside hydrolase family 3, C-terminal domain IPR002772 from INTERPRO.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1Y65_A 2OXN_A 3GS6_A 1TR9_A 3GSM_A 3UT0_B 3RRX_A 3USZ_A 2X42_A 2X40_A ....
Probab=100.00 E-value=4.7e-59 Score=466.76 Aligned_cols=258 Identities=33% Similarity=0.539 Sum_probs=217.7
Q ss_pred CHHHHHhcccCcccchhhHHhhhcCCcceEEeCCCCCCCCCCCHHHHHHHHHHHHHHhhhhccCCCcEEEeecCCCcccc
Q 040637 34 SLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNV 113 (453)
Q Consensus 34 TleEKigQl~~~~~~~~~~~~l~~~~iGgv~~~~~~~p~~~~~~~~~~~~i~~~q~~a~~~~~~iP~~~~~D~e~G~~~~ 113 (453)
|||||||||++ ...+.++++++|++++ ..++..+.+.+|.....++++||+++++|+|||.+.+
T Consensus 1 TleeKigQl~~-----~~~~~i~~~~vGgv~~-----------~~~~~~~~~~~~~~~~~~~~~iP~~i~~D~egG~~~~ 64 (299)
T PF00933_consen 1 TLEEKIGQLFM-----ELKELIKEYHVGGVIL-----------PEQLKQLTQSLQAISEQSRLGIPLLIAIDQEGGIVQR 64 (299)
T ss_dssp -HHHHHHHTEE-----HHHHHHHHHTCSEEEE-----------HHHHHHHHHHHHHHHCCGCGTCT-EEEEEETTSTTTS
T ss_pred CHHHHHHHHHH-----HHHHHHhcCCccEEEc-----------HHHHHHHHHHHHHHhhccccCCCeEEEEcCCCceEec
Confidence 79999999998 5677899999999987 5677777777777766788999999999999999998
Q ss_pred ccc--ccCCcc-------------------------------------ccCCCCccccCccCCCCHHHHHHHHH-HHhhc
Q 040637 114 YNA--TIFPHN-------------------------------------VCRDPRWGRCYESYSEDHKIVQEMTD-VILGL 153 (453)
Q Consensus 114 ~~~--t~fP~~-------------------------------------v~rdp~~GR~~esfgeDp~lv~~~~~-~i~Gl 153 (453)
.+. |.||++ +.++|+|||+.|||||||++|++|+. ||+|+
T Consensus 65 ~~~~~t~~P~~~~l~at~d~~~a~~~g~~~a~el~~~Gin~~~aPv~Dv~~~p~~~~~~rsfgeDp~~v~~~~~a~v~G~ 144 (299)
T PF00933_consen 65 LGGGFTAFPSPMALAATWDPELAYEVGRIIARELRALGINVNFAPVVDVNRNPRWGRGERSFGEDPDLVAEMARAFVRGL 144 (299)
T ss_dssp TTTTS---S-HHHHHHHTCHHHHHHHHHHHHHHHHHTT-SEEEEEB----SSTTSTTGGGSS-SSHHHHHHHHHHHHHHH
T ss_pred CCCcCccCcchhhhhhhccchHHHHHHHHHHHHHHHhhhccccccceeeeeeccccccccccchhHHHHHHHHHHHhccc
Confidence 765 999987 69999999999999999999999999 99999
Q ss_pred cCCCCCCCCCCccccCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHhh-hcCCceEEEeccCCCCc
Q 040637 154 QGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSI-IKGVSTIMVSYSSWNGE 232 (453)
Q Consensus 154 q~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~i-~~g~~~iM~sy~~ing~ 232 (453)
|+ .||++|+||||||+..+.+.+.....++.++|++.||+||+.+| ++|+.+||+||+.+|++
T Consensus 145 q~----------------~gv~~~~KHFpG~~~~d~~~~~~~~~~~~~~l~~~~l~pF~~~i~~ag~~~VM~sy~~id~~ 208 (299)
T PF00933_consen 145 QG----------------AGVAATAKHFPGHGAQDSHRDLPSVDVSERELREIDLPPFRAAIKDAGADAVMTSYPAIDGT 208 (299)
T ss_dssp HC----------------TTSEEEEEEETTGGCSCTTTTTEEEE--HHHHHHTTSHHHHHHHHHTT-SEEEE-STCCTTE
T ss_pred cc----------------ccccccccccccccccccccccceecCCcccccchhcccchhcccccccceeeeeccccCCc
Confidence 97 89999999999995544444344445699999999999999999 88999999999999999
Q ss_pred cccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccccccCCCCCChhHHHHHHH
Q 040637 233 KMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGI 312 (453)
Q Consensus 233 pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i~~~~~~~~~~~~~~ai 312 (453)
|+|+|+.+++++||++|||+ |+|||||++|.++...++ ..+++++||
T Consensus 209 pas~s~~~l~~lLR~~lgf~-------------------------------G~viSD~~~m~~~~~~~~--~~~~~~~al 255 (299)
T PF00933_consen 209 PASLSPKILTDLLRNELGFD-------------------------------GVVISDDLEMGALSSNYS--IEEAAVRAL 255 (299)
T ss_dssp EGGG-HHHHCCCCCCCS----------------------------------SEEEESTTTSHHHHCCTT--HHHHHHHHH
T ss_pred cchhhhccchhhCcCcccCC-------------------------------CeEecccchHHHHHhccc--cchHHHHHH
Confidence 99999999999999999999 999999999999988765 588999999
Q ss_pred HcCCceeccCCChhhhHHHHHHHHhcCCCcHHHHHHHhhHHHHH
Q 040637 313 QAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLV 356 (453)
Q Consensus 313 ~AG~D~~~~~~~~~~~~~~l~~av~~g~i~~~rid~av~RIL~~ 356 (453)
+||+||+|+|.+....++.|.++|++|.++++|||+||+|||++
T Consensus 256 ~AG~D~~l~~~~~~~~~~~l~~av~~g~i~~~~ld~av~RIl~~ 299 (299)
T PF00933_consen 256 NAGCDMLLVCNDPDDDIDALVEAVESGRISEERLDEAVRRILRL 299 (299)
T ss_dssp HHT-SBEESSSSHHHHHHHHHHHHHTTSSGHHHHHHHHHHHHHH
T ss_pred hCccCeeCCCCchhHHHHHHHHHHHcCCCCHHHHHHHHHHHhcC
Confidence 99999999998887778999999999999999999999999985
No 5
>PRK05337 beta-hexosaminidase; Provisional
Probab=100.00 E-value=4.5e-47 Score=386.38 Aligned_cols=241 Identities=18% Similarity=0.266 Sum_probs=207.0
Q ss_pred hhHHhhhcCCcceEEeCCCCCCCCCCCHHHHHHHHHHHHHHhhhhccCCCcEEEeecCCCccccc--ccccCCcc-----
Q 040637 50 ATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVY--NATIFPHN----- 122 (453)
Q Consensus 50 ~~~~~l~~~~iGgv~~~~~~~p~~~~~~~~~~~~i~~~q~~a~~~~~~iP~~~~~D~e~G~~~~~--~~t~fP~~----- 122 (453)
...++++++++|||++++. |..+++|+..+++++|+.+ ++|++|++|+|||.+++. +.|.||++
T Consensus 16 ~~~~~i~~~~~gGvilf~~----n~~~~~q~~~l~~~l~~~~-----~~plli~iD~EgG~v~rl~~~~t~~P~~~~laa 86 (337)
T PRK05337 16 EERERLQHPLVGGVILFAR----NFEDPAQLRELTAAIRAAV-----RPPLLIAVDQEGGRVQRFREGFTRLPAMQSFGA 86 (337)
T ss_pred HHHHHHHccCceEEEEECC----CCCCHHHHHHHHHHHHHhc-----CCCCEEEEecCCCEeeecCCCCCCCCCHHHHHh
Confidence 4567899999999999964 6678999999999999754 799999999999998863 66888865
Q ss_pred --------------------------------------cc-CCCCccccCccCCCCHHHHHHHHH-HHhhccCCCCCCCC
Q 040637 123 --------------------------------------VC-RDPRWGRCYESYSEDHKIVQEMTD-VILGLQGDPPSNLR 162 (453)
Q Consensus 123 --------------------------------------v~-rdp~~GR~~esfgeDp~lv~~~~~-~i~Glq~~~~~~~~ 162 (453)
+. ++|.+| .|||||||++|++|+. ||+|||+
T Consensus 87 t~d~~~~~~~~la~~~g~~~a~Elra~Gin~~~aPvlDv~~~~~~ig--~RsfgeDp~lv~~~a~a~i~Glq~------- 157 (337)
T PRK05337 87 LWDRDPLEALKLAEEAGWLMAAELRACGIDLSFAPVLDLDGISAVIG--DRAFHRDPQVVAALASAFIDGMHA------- 157 (337)
T ss_pred hcCCCchhHHHHHHHHHHHHHHHHHHhCCCccccCccCCCCCCCeee--ccCCCCCHHHHHHHHHHHHHHHHH-------
Confidence 33 344444 8999999999999999 9999997
Q ss_pred CCccccCCCCceeeeecccccCCCcccCCcCCCCcc--ChhHHHhccChhhHHhhhcCCceEEEe---ccCCCCccccCC
Q 040637 163 KGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVI--DMHGLLSIHMPAYSDSIIKGVSTIMVS---YSSWNGEKMHAN 237 (453)
Q Consensus 163 ~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v--~~~~l~~~~l~pF~~~i~~g~~~iM~s---y~~ing~pa~~s 237 (453)
.||++|+|||||||.++.|+|...++. +.++|++.||+||+.+|++|+.+||+| |+.+|++|+|+|
T Consensus 158 ---------~gv~~~~KHFpG~G~~~~dsh~~~~~~~~~~~el~~~~l~PF~~ai~~g~~~vM~aHv~y~~id~~Pa~~S 228 (337)
T PRK05337 158 ---------AGMAATGKHFPGHGAVEADSHVETPVDERPLEEIRAEDMAPFRALIAAGLDAVMPAHVIYPQVDPRPAGFS 228 (337)
T ss_pred ---------CCCEEEecccCCCCCCcCCCCCCCCCCCCCHHHHHhhhHHHHHHHHhcCCCEEEeCceeccCCCCCCCcCC
Confidence 899999999999999999999877654 567999999999999999999999999 889999999999
Q ss_pred HHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccccccCCCCCChhHHHHHHHHcCCc
Q 040637 238 RELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGID 317 (453)
Q Consensus 238 ~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i~~~~~~~~~~~~~~ai~AG~D 317 (453)
+++|+++||++|||+ |+|||||++|.++... .++.+++++||+||||
T Consensus 229 ~~~l~~lLR~elGF~-------------------------------G~ViSD~l~m~a~~~~--~~~~~~~~~al~AG~D 275 (337)
T PRK05337 229 RYWLQDILRQELGFD-------------------------------GVIFSDDLSMEGAAVA--GDYAERAQAALDAGCD 275 (337)
T ss_pred HHHHHHHHHHhcCCC-------------------------------EEEEecchhhhhhhhc--CCHHHHHHHHHHcCCC
Confidence 999999999999999 9999999999876543 3467899999999999
Q ss_pred eeccCCChhhhHHHHHHHHhcCCCcHHHHHHHhhHHHHHHHH
Q 040637 318 MVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFS 359 (453)
Q Consensus 318 ~~~~~~~~~~~~~~l~~av~~g~i~~~rid~av~RIL~~K~~ 359 (453)
|+|+|.+. +....+.+++.+ +++.+|+++++.+
T Consensus 276 l~l~~~~~-~~~~~~~~~l~~--------~~~~~~~~~~~~~ 308 (337)
T PRK05337 276 MVLVCNNR-DGAVSVLDNLSP--------PISAERLTRLYGR 308 (337)
T ss_pred EEeeCCCH-HHHHHHHHHHHh--------hccHHHHHHHhcc
Confidence 99998775 344567777655 7778888888766
No 6
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=65.67 E-value=31 Score=34.73 Aligned_cols=90 Identities=16% Similarity=0.021 Sum_probs=60.8
Q ss_pred cChhhHHhhhcCCceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceE
Q 040637 207 HMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFV 286 (453)
Q Consensus 207 ~l~pF~~~i~~g~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~V 286 (453)
++.-.+++.+.|+.+||+--+-|..-.=-.|++.| .+++++.. =.|
T Consensus 147 D~v~a~rLed~Gc~aVMPlgsPIGSg~Gl~n~~~l-~~i~e~~~---------------------------------vpV 192 (267)
T CHL00162 147 DPMLAKHLEDIGCATVMPLGSPIGSGQGLQNLLNL-QIIIENAK---------------------------------IPV 192 (267)
T ss_pred CHHHHHHHHHcCCeEEeeccCcccCCCCCCCHHHH-HHHHHcCC---------------------------------CcE
Confidence 34456788899999999976666422233577777 56776654 246
Q ss_pred EeeccccccccCCCCCChhHHHHHHHHcCCceeccC------CChhhhHHHHHHHHhcCC
Q 040637 287 ISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIP------FNLTEFIDDLTDLVKNNV 340 (453)
Q Consensus 287 iSD~~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~~------~~~~~~~~~l~~av~~g~ 340 (453)
|-|.+ |.. .+.+..|++.|+|=++.. .++.++..++..||+.|+
T Consensus 193 ivdAG----Igt------~sDa~~AmElGaDgVL~nSaIakA~dP~~mA~a~~~AV~AGR 242 (267)
T CHL00162 193 IIDAG----IGT------PSEASQAMELGASGVLLNTAVAQAKNPEQMAKAMKLAVQAGR 242 (267)
T ss_pred EEeCC----cCC------HHHHHHHHHcCCCEEeecceeecCCCHHHHHHHHHHHHHHHH
Confidence 66633 222 456899999999999864 355566677777777775
No 7
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=62.67 E-value=19 Score=35.89 Aligned_cols=89 Identities=13% Similarity=0.060 Sum_probs=57.1
Q ss_pred hhhHHhhhcCCceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEe
Q 040637 209 PAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVIS 288 (453)
Q Consensus 209 ~pF~~~i~~g~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViS 288 (453)
.-.+++.+.|+.+||+--+-|..-.--.|++.| .+++++.+- -||-
T Consensus 135 v~akrL~d~GcaavMPlgsPIGSg~Gi~n~~~l-~~i~~~~~v---------------------------------PvIv 180 (247)
T PF05690_consen 135 VLAKRLEDAGCAAVMPLGSPIGSGRGIQNPYNL-RIIIERADV---------------------------------PVIV 180 (247)
T ss_dssp HHHHHHHHTT-SEBEEBSSSTTT---SSTHHHH-HHHHHHGSS---------------------------------SBEE
T ss_pred HHHHHHHHCCCCEEEecccccccCcCCCCHHHH-HHHHHhcCC---------------------------------cEEE
Confidence 445788899999999977766433344677777 667777743 3555
Q ss_pred eccccccccCCCCCChhHHHHHHHHcCCceeccC------CChhhhHHHHHHHHhcCCC
Q 040637 289 DWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIP------FNLTEFIDDLTDLVKNNVI 341 (453)
Q Consensus 289 D~~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~~------~~~~~~~~~l~~av~~g~i 341 (453)
|.+ ++. ...+..|.+.|+|-+|+. .++..+..+...||+.|++
T Consensus 181 DAG-iG~---------pSdaa~AMElG~daVLvNTAiA~A~dPv~MA~Af~~AV~AGR~ 229 (247)
T PF05690_consen 181 DAG-IGT---------PSDAAQAMELGADAVLVNTAIAKAKDPVAMARAFKLAVEAGRL 229 (247)
T ss_dssp ES----S---------HHHHHHHHHTT-SEEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred eCC-CCC---------HHHHHHHHHcCCceeehhhHHhccCCHHHHHHHHHHHHHHHHH
Confidence 663 332 344789999999999974 3444566777777777753
No 8
>PLN03007 UDP-glucosyltransferase family protein
Probab=53.46 E-value=59 Score=35.22 Aligned_cols=124 Identities=24% Similarity=0.380 Sum_probs=69.1
Q ss_pred ceEEEeccCCCCccccCCHHHHHHHHhh--hcCCccccceeeeeecccccCc-hh---HHH-HhhhhccccceEEeeccc
Q 040637 220 STIMVSYSSWNGEKMHANRELVTGFLKG--TLKFKVTFHFVFFILHRYNTST-SD---LRR-ILTLTKILEGFVISDWQG 292 (453)
Q Consensus 220 ~~iM~sy~~ing~pa~~s~~ll~~~LR~--~lgF~~~~~~~~~~~~~~~~~~-~~---~~~-~~~~~~~~~G~ViSD~~~ 292 (453)
+.|.+|+-++ +..+..-+..+++. ..|.. |++ .-|-+.+. ++ |-. ...-|+ -.|+++.+|.-
T Consensus 286 svvyvsfGS~----~~~~~~~~~~~~~~l~~~~~~----flw--~~~~~~~~~~~~~~lp~~~~~r~~-~~g~~v~~w~P 354 (482)
T PLN03007 286 SVIYLSFGSV----ASFKNEQLFEIAAGLEGSGQN----FIW--VVRKNENQGEKEEWLPEGFEERTK-GKGLIIRGWAP 354 (482)
T ss_pred ceEEEeecCC----cCCCHHHHHHHHHHHHHCCCC----EEE--EEecCCcccchhhcCCHHHHHHhc-cCCEEEecCCC
Confidence 5788887665 34455566677665 45555 222 22221111 11 110 000111 34899999985
Q ss_pred cccccCCCCC------ChhHHHHHHHHcCCceeccCCChhhhHHH--HHHH------H--------hcCCCcHHHHHHHh
Q 040637 293 IDRITSPPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFIDD--LTDL------V--------KNNVITMDRIDDAV 350 (453)
Q Consensus 293 m~~i~~~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~~~--l~~a------v--------~~g~i~~~rid~av 350 (453)
...|-.+... .--.++.+|+.+|+=|+++|.-.++...+ +.+. + +.+.++.+.|.+++
T Consensus 355 Q~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av 434 (482)
T PLN03007 355 QVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAV 434 (482)
T ss_pred HHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHH
Confidence 5555332110 00247899999999999998644433322 1221 1 33568999999999
Q ss_pred hHHH
Q 040637 351 GRIL 354 (453)
Q Consensus 351 ~RIL 354 (453)
++++
T Consensus 435 ~~~m 438 (482)
T PLN03007 435 REVI 438 (482)
T ss_pred HHHh
Confidence 9987
No 9
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=43.19 E-value=67 Score=32.10 Aligned_cols=86 Identities=13% Similarity=0.037 Sum_probs=56.8
Q ss_pred hHHhhhcCCceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeec
Q 040637 211 YSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDW 290 (453)
Q Consensus 211 F~~~i~~g~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~ 290 (453)
-+++.+.|+.+||+--.-|..----.|++.| ++++++. + =-||-|.
T Consensus 144 arrLee~GcaavMPl~aPIGSg~G~~n~~~l-~iiie~a--~-------------------------------VPviVDA 189 (262)
T COG2022 144 ARRLEEAGCAAVMPLGAPIGSGLGLQNPYNL-EIIIEEA--D-------------------------------VPVIVDA 189 (262)
T ss_pred HHHHHhcCceEeccccccccCCcCcCCHHHH-HHHHHhC--C-------------------------------CCEEEeC
Confidence 3566788999999976666432334578777 6788877 5 4466676
Q ss_pred cccccccCCCCCChhHHHHHHHHcCCceeccCC------ChhhhHHHHHHHHhcCC
Q 040637 291 QGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPF------NLTEFIDDLTDLVKNNV 340 (453)
Q Consensus 291 ~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~~~------~~~~~~~~l~~av~~g~ 340 (453)
+ ++. ...+..|.+-|+|-+|+.. |+-.+..+..-||+.|+
T Consensus 190 G-iG~---------pSdAa~aMElG~DaVL~NTAiA~A~DPv~MA~Af~~Av~AGr 235 (262)
T COG2022 190 G-IGT---------PSDAAQAMELGADAVLLNTAIARAKDPVAMARAFALAVEAGR 235 (262)
T ss_pred C-CCC---------hhHHHHHHhcccceeehhhHhhccCChHHHHHHHHHHHHHhH
Confidence 5 221 2236889999999999743 33345556666776664
No 10
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=43.07 E-value=84 Score=33.04 Aligned_cols=99 Identities=22% Similarity=0.261 Sum_probs=64.8
Q ss_pred eeeecc--------cccCchhHHHHhhhhccccceEEeeccccccccCCCCCChhHHHHHHHHcCCc--eeccCCChhhh
Q 040637 259 FFILHR--------YNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGID--MVMIPFNLTEF 328 (453)
Q Consensus 259 ~~~~~~--------~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i~~~~~~~~~~~~~~ai~AG~D--~~~~~~~~~~~ 328 (453)
..++|| |+..+-|||-|-.|...+.=-||-|-.-.-+.+.+ -...+..|+.+|+| ++-.-.+++..
T Consensus 239 viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~sd~----~~~~a~AAva~GAdGliIE~H~~pd~A 314 (352)
T PRK13396 239 VILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKSEY----VPSMAMAAIAAGTDSLMIEVHPNPAKA 314 (352)
T ss_pred EEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcHHH----HHHHHHHHHhhCCCeEEEEecCCcccC
Confidence 567777 77888999999999666655577776532222211 12457899999999 44333333322
Q ss_pred HHHHHHHHhcCCCcHHHHHHHhhHHHHHHHHhCCCCCC
Q 040637 329 IDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENP 366 (453)
Q Consensus 329 ~~~l~~av~~g~i~~~rid~av~RIL~~K~~~Glf~~p 366 (453)
+.+. ...++.+.+.+-++.+..+..-+|-+..|
T Consensus 315 ---lsD~--~qsl~p~~~~~l~~~i~~i~~~~g~~~~~ 347 (352)
T PRK13396 315 ---LSDG--PQSLTPDRFDRLMQELAVIGKTVGRWPQP 347 (352)
T ss_pred ---CChh--hhcCCHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 2222 23478899999999888888878865555
No 11
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=40.29 E-value=1.3e+02 Score=30.18 Aligned_cols=83 Identities=16% Similarity=0.104 Sum_probs=52.3
Q ss_pred HHhhhcCCceEEE--eccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEee
Q 040637 212 SDSIIKGVSTIMV--SYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISD 289 (453)
Q Consensus 212 ~~~i~~g~~~iM~--sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD 289 (453)
+++.+.|+..||+ +-.. .|. --.++++|. .+++.. + =.||-|
T Consensus 138 r~l~~~G~~~vmPlg~pIG-sg~-Gi~~~~~I~-~I~e~~--~-------------------------------vpVI~e 181 (248)
T cd04728 138 KRLEDAGCAAVMPLGSPIG-SGQ-GLLNPYNLR-IIIERA--D-------------------------------VPVIVD 181 (248)
T ss_pred HHHHHcCCCEeCCCCcCCC-CCC-CCCCHHHHH-HHHHhC--C-------------------------------CcEEEe
Confidence 5666789999999 4443 222 233688886 556553 4 456666
Q ss_pred ccccccccCCCCCChhHHHHHHHHcCCceeccCC------ChhhhHHHHHHHHhcCC
Q 040637 290 WQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPF------NLTEFIDDLTDLVKNNV 340 (453)
Q Consensus 290 ~~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~~~------~~~~~~~~l~~av~~g~ 340 (453)
.. |.+ .+.+.+|++.|+|-+++.. ++.....++..+++.|+
T Consensus 182 gG----I~t------peda~~AmelGAdgVlV~SAIt~a~dP~~ma~af~~Av~aGr 228 (248)
T cd04728 182 AG----IGT------PSDAAQAMELGADAVLLNTAIAKAKDPVAMARAFKLAVEAGR 228 (248)
T ss_pred CC----CCC------HHHHHHHHHcCCCEEEEChHhcCCCCHHHHHHHHHHHHHHHH
Confidence 33 222 4668999999999999753 23344455666666654
No 12
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=39.54 E-value=1.2e+02 Score=31.61 Aligned_cols=85 Identities=14% Similarity=0.089 Sum_probs=56.8
Q ss_pred hHHhhhcCCceEEEeccCC-CCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEee
Q 040637 211 YSDSIIKGVSTIMVSYSSW-NGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISD 289 (453)
Q Consensus 211 F~~~i~~g~~~iM~sy~~i-ng~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD 289 (453)
-+++.+.|+.+||+--.-| .|.+.+ +++.|..+... .+ =.|+-|
T Consensus 211 a~~l~~~g~~avmPl~~pIGsg~gv~-~p~~i~~~~e~---~~-------------------------------vpVivd 255 (326)
T PRK11840 211 AKRLEDAGAVAVMPLGAPIGSGLGIQ-NPYTIRLIVEG---AT-------------------------------VPVLVD 255 (326)
T ss_pred HHHHHhcCCEEEeeccccccCCCCCC-CHHHHHHHHHc---CC-------------------------------CcEEEe
Confidence 4566677999999933333 456655 89888665554 45 457777
Q ss_pred ccccccccCCCCCChhHHHHHHHHcCCceeccCC------ChhhhHHHHHHHHhcCC
Q 040637 290 WQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPF------NLTEFIDDLTDLVKNNV 340 (453)
Q Consensus 290 ~~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~~~------~~~~~~~~l~~av~~g~ 340 (453)
.+ + .. ...+..|++.|+|=++... ++-.+..++..||+.|+
T Consensus 256 AG-I---g~------~sda~~AmelGadgVL~nSaIa~a~dPv~Ma~A~~~av~aGr 302 (326)
T PRK11840 256 AG-V---GT------ASDAAVAMELGCDGVLMNTAIAEAKNPVLMARAMKLAVEAGR 302 (326)
T ss_pred CC-C---CC------HHHHHHHHHcCCCEEEEcceeccCCCHHHHHHHHHHHHHHHH
Confidence 54 2 22 4568999999999998643 34455666777777664
No 13
>COG0313 Predicted methyltransferases [General function prediction only]
Probab=38.91 E-value=85 Score=31.93 Aligned_cols=85 Identities=24% Similarity=0.153 Sum_probs=51.5
Q ss_pred HHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccccccCCCCCChhHHHHHHHHcCCceeccC
Q 040637 243 GFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIP 322 (453)
Q Consensus 243 ~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~~ 322 (453)
..|=+-||-+ .-++.+|..|.....=+=|-.|..-..--+|||.+ |..|+++. ..-+..|.++|+.++.+|
T Consensus 43 ~~LL~~~~I~----~~~is~h~hne~~~~~~li~~l~~g~~valVSDAG-~P~ISDPG----~~LV~~a~~~gi~V~~lP 113 (275)
T COG0313 43 RKLLSHLGIK----TPLISYHEHNEKEKLPKLIPLLKKGKSVALVSDAG-TPLISDPG----YELVRAAREAGIRVVPLP 113 (275)
T ss_pred HHHHHHhCCC----CceecccCCcHHHHHHHHHHHHhcCCeEEEEecCC-CCcccCcc----HHHHHHHHHcCCcEEecC
Confidence 4444455554 12666777776654433333444444567889987 55666643 356889999999999887
Q ss_pred CChhhhHHHHHHHHhcCC
Q 040637 323 FNLTEFIDDLTDLVKNNV 340 (453)
Q Consensus 323 ~~~~~~~~~l~~av~~g~ 340 (453)
... ..+..++.+|.
T Consensus 114 G~s----A~~tAL~~SGl 127 (275)
T COG0313 114 GPS----ALITALSASGL 127 (275)
T ss_pred Ccc----HHHHHHHHcCC
Confidence 632 33455555653
No 14
>cd00938 HisRS_RNA HisRS_RNA binding domain. This short RNA-binding domain is found at the N-terminus of HisRS in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). This domain consists of a helix- turn- helix structure, which is similar to other RNA-binding proteins. It is involved in both protein-RNA interactions by binding tRNA and protein-protein interactions, which are important for the formation of aaRSs into multienzyme complexes.
Probab=38.40 E-value=64 Score=24.05 Aligned_cols=31 Identities=23% Similarity=0.442 Sum_probs=26.1
Q ss_pred HHHHHHhcCCCcHHHHHHHhhHHHHHHHHhC
Q 040637 331 DLTDLVKNNVITMDRIDDAVGRILLVKFSMG 361 (453)
Q Consensus 331 ~l~~av~~g~i~~~rid~av~RIL~~K~~~G 361 (453)
.....++...-+.+.|+.+|..+|.+|..+|
T Consensus 12 e~VRkLKa~KA~k~~i~~eV~~LL~LKaqlg 42 (45)
T cd00938 12 ELVRKLKAEKASKEQIAEEVAKLLELKAQLG 42 (45)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHhC
Confidence 3455566677889999999999999999987
No 15
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=37.22 E-value=65 Score=33.62 Aligned_cols=94 Identities=16% Similarity=0.177 Sum_probs=56.9
Q ss_pred eeeecc-------cccCchhHHHHhhhhccccceEEeeccccccccCCCCCChhHHHHHHHHcCCceecc--CCChhhhH
Q 040637 259 FFILHR-------YNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMI--PFNLTEFI 329 (453)
Q Consensus 259 ~~~~~~-------~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~--~~~~~~~~ 329 (453)
..++|| |+..+-||+.|.+|...+.--||-|..--.+.... ....+..|+.+|+|-+++ -++++..
T Consensus 231 viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~~~~----v~~~a~AAvA~GAdGliIE~H~~pd~a- 305 (335)
T PRK08673 231 VILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGKRDL----VEPLALAAVAAGADGLIVEVHPDPEKA- 305 (335)
T ss_pred EEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCccccc----hHHHHHHHHHhCCCEEEEEecCCcccC-
Confidence 455665 45667899999988887766676775532222111 124578999999994433 3333222
Q ss_pred HHHHHHHhcCCCcHHHHHHHhhHHHHHHHHhC
Q 040637 330 DDLTDLVKNNVITMDRIDDAVGRILLVKFSMG 361 (453)
Q Consensus 330 ~~l~~av~~g~i~~~rid~av~RIL~~K~~~G 361 (453)
+.+. ...++.+.+.+.++.|..+...+|
T Consensus 306 --lsD~--~~sl~p~e~~~lv~~i~~i~~~~g 333 (335)
T PRK08673 306 --LSDG--PQSLTPEEFEELMKKLRAIAEALG 333 (335)
T ss_pred --CCcc--hhcCCHHHHHHHHHHHHHHHHHhC
Confidence 2111 124777888888888776655544
No 16
>PRK00208 thiG thiazole synthase; Reviewed
Probab=36.67 E-value=1.7e+02 Score=29.49 Aligned_cols=83 Identities=14% Similarity=0.083 Sum_probs=51.4
Q ss_pred HHhhhcCCceEEE--eccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEee
Q 040637 212 SDSIIKGVSTIMV--SYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISD 289 (453)
Q Consensus 212 ~~~i~~g~~~iM~--sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD 289 (453)
+++.+.|+..||+ +-+. .|. .-.+++++ ..+++.. + =-||-|
T Consensus 138 k~l~~~G~~~vmPlg~pIG-sg~-gi~~~~~i-~~i~e~~--~-------------------------------vpVIve 181 (250)
T PRK00208 138 KRLEEAGCAAVMPLGAPIG-SGL-GLLNPYNL-RIIIEQA--D-------------------------------VPVIVD 181 (250)
T ss_pred HHHHHcCCCEeCCCCcCCC-CCC-CCCCHHHH-HHHHHhc--C-------------------------------CeEEEe
Confidence 5566779999999 5443 233 23357776 4455553 3 346666
Q ss_pred ccccccccCCCCCChhHHHHHHHHcCCceeccCC------ChhhhHHHHHHHHhcCC
Q 040637 290 WQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPF------NLTEFIDDLTDLVKNNV 340 (453)
Q Consensus 290 ~~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~~~------~~~~~~~~l~~av~~g~ 340 (453)
.. |.+ .+.+.+|++.|+|-+++.. ++.....++.++|+.|+
T Consensus 182 aG----I~t------peda~~AmelGAdgVlV~SAItka~dP~~ma~af~~Av~aGr 228 (250)
T PRK00208 182 AG----IGT------PSDAAQAMELGADAVLLNTAIAVAGDPVAMARAFKLAVEAGR 228 (250)
T ss_pred CC----CCC------HHHHHHHHHcCCCEEEEChHhhCCCCHHHHHHHHHHHHHHHH
Confidence 32 322 4668999999999999753 23344455666666554
No 17
>PLN00164 glucosyltransferase; Provisional
Probab=34.96 E-value=72 Score=34.65 Aligned_cols=71 Identities=21% Similarity=0.361 Sum_probs=46.4
Q ss_pred cceEEeeccccccccCCCC-------CChhHHHHHHHHcCCceeccCCChhhhHHH--HHHH----H--h-----cCCCc
Q 040637 283 EGFVISDWQGIDRITSPPH-------SNYTYSVQSGIQAGIDMVMIPFNLTEFIDD--LTDL----V--K-----NNVIT 342 (453)
Q Consensus 283 ~G~ViSD~~~m~~i~~~~~-------~~~~~~~~~ai~AG~D~~~~~~~~~~~~~~--l~~a----v--~-----~g~i~ 342 (453)
.|+|+.+|.-...|-.+.. .. -.++.+|+.+|+=|+++|.-.++...+ +.+. + . ++.++
T Consensus 339 ~g~~v~~w~PQ~~iL~h~~vg~fvtH~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~ 417 (480)
T PLN00164 339 RGLVWPTWAPQKEILAHAAVGGFVTHCG-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVE 417 (480)
T ss_pred CCeEEeecCCHHHHhcCcccCeEEeecc-cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCc
Confidence 4899999985444433211 10 236899999999999998654444333 2221 1 1 23578
Q ss_pred HHHHHHHhhHHH
Q 040637 343 MDRIDDAVGRIL 354 (453)
Q Consensus 343 ~~rid~av~RIL 354 (453)
.+.|.++++|++
T Consensus 418 ~e~l~~av~~vm 429 (480)
T PLN00164 418 AAELERAVRSLM 429 (480)
T ss_pred HHHHHHHHHHHh
Confidence 999999999997
No 18
>PLN02210 UDP-glucosyl transferase
Probab=33.93 E-value=1.1e+02 Score=33.08 Aligned_cols=126 Identities=18% Similarity=0.269 Sum_probs=67.6
Q ss_pred CceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccccccC
Q 040637 219 VSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITS 298 (453)
Q Consensus 219 ~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i~~ 298 (453)
-+.|.+|+-+.. ..++..+..+++.=-.... +|++ ..|-+....+...+...++.-.|+| .+|.-...+-.
T Consensus 269 ~svvyvsfGS~~----~~~~~~~~e~a~~l~~~~~--~flw--~~~~~~~~~~~~~~~~~~~~~~g~v-~~w~PQ~~iL~ 339 (456)
T PLN02210 269 SSVVYISFGSML----ESLENQVETIAKALKNRGV--PFLW--VIRPKEKAQNVQVLQEMVKEGQGVV-LEWSPQEKILS 339 (456)
T ss_pred CceEEEEecccc----cCCHHHHHHHHHHHHhCCC--CEEE--EEeCCccccchhhHHhhccCCCeEE-EecCCHHHHhc
Confidence 357888876653 3355566666553223332 2332 2232221122222222332355765 48874444433
Q ss_pred CCC-------CChhHHHHHHHHcCCceeccCCChhhhHH--HHHH----H--Hh----cCCCcHHHHHHHhhHHH
Q 040637 299 PPH-------SNYTYSVQSGIQAGIDMVMIPFNLTEFID--DLTD----L--VK----NNVITMDRIDDAVGRIL 354 (453)
Q Consensus 299 ~~~-------~~~~~~~~~ai~AG~D~~~~~~~~~~~~~--~l~~----a--v~----~g~i~~~rid~av~RIL 354 (453)
+.. .. -.++.+|+.+|+=|+++|.-.++... .+.+ + +. ++.++.+.|.++|++++
T Consensus 340 h~~vg~FitH~G-~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m 413 (456)
T PLN02210 340 HMAISCFVTHCG-WNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVT 413 (456)
T ss_pred CcCcCeEEeeCC-cccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHh
Confidence 211 00 13689999999999999865443322 2222 1 22 35689999999999987
No 19
>PF12100 DUF3576: Domain of unknown function (DUF3576); InterPro: IPR021959 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 100 amino acids in length. This domain has a single completely conserved residue G that may be functionally important.
Probab=32.75 E-value=23 Score=30.83 Aligned_cols=18 Identities=22% Similarity=0.586 Sum_probs=14.6
Q ss_pred hhhhccccceEEeecccc
Q 040637 276 LTLTKILEGFVISDWQGI 293 (453)
Q Consensus 276 ~~~~~~~~G~ViSD~~~m 293 (453)
|..++++.|+|+|||-+-
T Consensus 21 l~saD~~gGVI~TdWY~~ 38 (103)
T PF12100_consen 21 LASADPFGGVIVTDWYSP 38 (103)
T ss_pred hhhcCCCCCEEEeccccC
Confidence 456788899999999864
No 20
>PLN02764 glycosyltransferase family protein
Probab=32.02 E-value=93 Score=33.71 Aligned_cols=73 Identities=19% Similarity=0.283 Sum_probs=47.3
Q ss_pred cceEEeeccccccccCCCCC------ChhHHHHHHHHcCCceeccCCChhhhHH--HHHH----HHh-----cCCCcHHH
Q 040637 283 EGFVISDWQGIDRITSPPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFID--DLTD----LVK-----NNVITMDR 345 (453)
Q Consensus 283 ~G~ViSD~~~m~~i~~~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~~--~l~~----av~-----~g~i~~~r 345 (453)
.|+|+.+|.-...|-.+... ---.++.+|+.+|+=|+++|...++... .+.+ .+. .+.++.+.
T Consensus 317 rG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~ 396 (453)
T PLN02764 317 RGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKES 396 (453)
T ss_pred CCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHH
Confidence 49999999854444332110 0024789999999999999865443322 2222 222 13589999
Q ss_pred HHHHhhHHHH
Q 040637 346 IDDAVGRILL 355 (453)
Q Consensus 346 id~av~RIL~ 355 (453)
|.++++|++.
T Consensus 397 i~~av~~vm~ 406 (453)
T PLN02764 397 LRDAINSVMK 406 (453)
T ss_pred HHHHHHHHhc
Confidence 9999999984
No 21
>PLN00414 glycosyltransferase family protein
Probab=31.98 E-value=95 Score=33.46 Aligned_cols=73 Identities=21% Similarity=0.247 Sum_probs=46.8
Q ss_pred cceEEeeccccccccCCCCC------ChhHHHHHHHHcCCceeccCCChhhhHH--HHHHH------Hh---cCCCcHHH
Q 040637 283 EGFVISDWQGIDRITSPPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFID--DLTDL------VK---NNVITMDR 345 (453)
Q Consensus 283 ~G~ViSD~~~m~~i~~~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~~--~l~~a------v~---~g~i~~~r 345 (453)
.|+|+.+|.-...|-.+... ---.++.+|+.+|+=|+++|.-.++... .+.+. ++ +|.++.+.
T Consensus 312 ~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~ 391 (446)
T PLN00414 312 RGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKES 391 (446)
T ss_pred CCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHH
Confidence 49999999855444332210 0024789999999999999864433322 22221 11 13589999
Q ss_pred HHHHhhHHHH
Q 040637 346 IDDAVGRILL 355 (453)
Q Consensus 346 id~av~RIL~ 355 (453)
|.++|++++.
T Consensus 392 i~~~v~~~m~ 401 (446)
T PLN00414 392 LRDTVKSVMD 401 (446)
T ss_pred HHHHHHHHhc
Confidence 9999999984
No 22
>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A.
Probab=29.60 E-value=37 Score=23.00 Aligned_cols=17 Identities=29% Similarity=0.559 Sum_probs=13.1
Q ss_pred hhHHhhhcCCceEEEec
Q 040637 210 AYSDSIIKGVSTIMVSY 226 (453)
Q Consensus 210 pF~~~i~~g~~~iM~sy 226 (453)
-++.++.+|+++||+-|
T Consensus 12 ~~~~~l~~GVDgI~Td~ 28 (30)
T PF13653_consen 12 SWRELLDLGVDGIMTDY 28 (30)
T ss_dssp HHHHHHHHT-SEEEES-
T ss_pred HHHHHHHcCCCEeeCCC
Confidence 46889999999999965
No 23
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=28.36 E-value=1.2e+02 Score=20.41 Aligned_cols=27 Identities=19% Similarity=0.393 Sum_probs=23.7
Q ss_pred hHHHHHHHHhcCCCcHHHHHHHhhHHH
Q 040637 328 FIDDLTDLVKNNVITMDRIDDAVGRIL 354 (453)
Q Consensus 328 ~~~~l~~av~~g~i~~~rid~av~RIL 354 (453)
-+..|.++..+|.||++.-++.-.+||
T Consensus 4 ~L~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 4 RLEKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 457789999999999999999988886
No 24
>TIGR03586 PseI pseudaminic acid synthase.
Probab=27.97 E-value=1.3e+02 Score=31.32 Aligned_cols=104 Identities=19% Similarity=0.251 Sum_probs=60.6
Q ss_pred chhHHHHhhhhccccceE-EeeccccccccCCCCCChhHHHHHHHHcCCceeccCCChhhhHHHHHHHHhcCCCcHHHHH
Q 040637 269 TSDLRRILTLTKILEGFV-ISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRID 347 (453)
Q Consensus 269 ~~~~~~~~~~~~~~~G~V-iSD~~~m~~i~~~~~~~~~~~~~~ai~AG~D~~~~~~~~~~~~~~l~~av~~g~i~~~rid 347 (453)
+-+|+.|-+|...++=.| +||=. . . ......|+.+|++++---++++.. +..-=..-.++.+.+.
T Consensus 179 ~~nL~~i~~lk~~f~~pVG~SDHt-~---------G-~~~~~aAva~GA~iIEkH~tld~~---l~G~D~~~Sl~p~e~~ 244 (327)
T TIGR03586 179 DANLRTIPDLAERFNVPVGLSDHT-L---------G-ILAPVAAVALGACVIEKHFTLDRS---DGGVDSAFSLEPDEFK 244 (327)
T ss_pred cCCHHHHHHHHHHhCCCEEeeCCC-C---------c-hHHHHHHHHcCCCEEEeCCChhhc---CCCCChhccCCHHHHH
Confidence 445666666666553334 57721 1 1 256789999999987544443221 1000012358889999
Q ss_pred HHhhHHHHHHHHhCCCCCCCCCchhhhhcccHHHHHHHHHHHHhceEEeec
Q 040637 348 DAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLKN 398 (453)
Q Consensus 348 ~av~RIL~~K~~~Glf~~p~~~~~~~~~~~~~~h~~la~~~a~~SivLLKN 398 (453)
+.|+.|-.+...+|--.. .+ .+..+. .+..|+|||.-+|
T Consensus 245 ~lv~~ir~~~~~lg~~~k---------~~-~~~E~~--~~~~rrsl~a~~d 283 (327)
T TIGR03586 245 ALVKEVRNAWLALGEVNY---------EL-SEKEKK--SRQFRRSLYVVKD 283 (327)
T ss_pred HHHHHHHHHHHHhCCCCC---------Cc-CHHHhh--ccceeEEEEEccC
Confidence 999999888887773221 11 111122 3335999999888
No 25
>PLN02173 UDP-glucosyl transferase family protein
Probab=27.25 E-value=4.3e+02 Score=28.55 Aligned_cols=124 Identities=15% Similarity=0.251 Sum_probs=68.0
Q ss_pred ceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHH-HHhhhhccccceEEeeccccccccC
Q 040637 220 STIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLR-RILTLTKILEGFVISDWQGIDRITS 298 (453)
Q Consensus 220 ~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~ViSD~~~m~~i~~ 298 (453)
+.|.+|+-+. +.++.+.+..+.+.=-|.. | .+.-|... ...|. ..+.-++. +|++|.+|.-...|-.
T Consensus 265 svvyvsfGS~----~~~~~~~~~ela~gLs~~~----f--lWvvr~~~-~~~lp~~~~~~~~~-~~~~i~~W~PQ~~iL~ 332 (449)
T PLN02173 265 SVVYIAFGSM----AKLSSEQMEEIASAISNFS----Y--LWVVRASE-ESKLPPGFLETVDK-DKSLVLKWSPQLQVLS 332 (449)
T ss_pred ceEEEEeccc----ccCCHHHHHHHHHHhcCCC----E--EEEEeccc-hhcccchHHHhhcC-CceEEeCCCCHHHHhC
Confidence 5777777553 4677777878777533333 3 23233211 11111 11112222 4566668975444433
Q ss_pred CCCC------ChhHHHHHHHHcCCceeccCCChhhhH--HHHHHH------H----hcCCCcHHHHHHHhhHHHH
Q 040637 299 PPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFI--DDLTDL------V----KNNVITMDRIDDAVGRILL 355 (453)
Q Consensus 299 ~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~--~~l~~a------v----~~g~i~~~rid~av~RIL~ 355 (453)
+... ---.++.+|+.+|+=|+++|.-.++.. ..+.+. | .++.++.+.|.+++++++.
T Consensus 333 H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~ 407 (449)
T PLN02173 333 NKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVME 407 (449)
T ss_pred CCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhc
Confidence 2110 002468999999999999985443322 223332 1 1245788999999999983
No 26
>TIGR00608 radc DNA repair protein radc. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=27.04 E-value=1.1e+02 Score=29.79 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=53.2
Q ss_pred CHHHHHHHHH-HHhhccCCCCCCCCCCccccCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHhhhc
Q 040637 139 DHKIVQEMTD-VILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIK 217 (453)
Q Consensus 139 Dp~lv~~~~~-~i~Glq~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~i~~ 217 (453)
+|..+.++-. ...+... +.=-+-|.+.++.++++-.=|-|- .+.+.+++++ -|+.++..
T Consensus 99 s~~~v~~~l~~~l~~~~~-----E~f~vl~Ld~~n~li~~~~i~~Gt--------~~~~~v~pRe-------I~~~Al~~ 158 (218)
T TIGR00608 99 SPEAAAEFLHTDLAHETR-----EHFMVLFLDRKNRLIAKEVVFIGT--------VNHVPVHPRE-------IFKEALKL 158 (218)
T ss_pred CHHHHHHHHHHHhcCCCc-----eEEEEEEECCCCcEEEEEEeecCC--------CCeEEEcHHH-------HHHHHHHh
Confidence 4566666644 4444332 111223444456777765544431 1233467777 48899999
Q ss_pred CCceEEEeccCCCCc--cccCCHHHHHHHHhhhc
Q 040637 218 GVSTIMVSYSSWNGE--KMHANRELVTGFLKGTL 249 (453)
Q Consensus 218 g~~~iM~sy~~ing~--pa~~s~~ll~~~LR~~l 249 (453)
++.+|+++||.-+|. |...+..+ |.-|++-.
T Consensus 159 ~A~~vIlaHNHPSG~~~PS~~Di~~-T~~l~~a~ 191 (218)
T TIGR00608 159 SASALILAHNHPSGEPSPSQEDILI-TERLRKAA 191 (218)
T ss_pred hCCeEEEEeecCCCCCCCCHHHHHH-HHHHHHHH
Confidence 999999999998886 44445444 55566443
No 27
>PLN02670 transferase, transferring glycosyl groups
Probab=26.38 E-value=95 Score=33.80 Aligned_cols=126 Identities=21% Similarity=0.227 Sum_probs=69.2
Q ss_pred CceEEEeccCCCCccccCCHHHHHHHHhh--hcCCccccceeeeeecccccC-chh----HHH-HhhhhccccceEEeec
Q 040637 219 VSTIMVSYSSWNGEKMHANRELVTGFLKG--TLKFKVTFHFVFFILHRYNTS-TSD----LRR-ILTLTKILEGFVISDW 290 (453)
Q Consensus 219 ~~~iM~sy~~ing~pa~~s~~ll~~~LR~--~lgF~~~~~~~~~~~~~~~~~-~~~----~~~-~~~~~~~~~G~ViSD~ 290 (453)
-+.|.+|+-+. ++++++-+..+... ..+.. | .+..|-.+. +.+ |-+ .+.-++ -.|+|+.+|
T Consensus 278 ~sVvyvsfGS~----~~l~~~q~~ela~gl~~s~~~--F----lWv~r~~~~~~~~~~~~lp~~f~~~~~-~rG~vv~~W 346 (472)
T PLN02670 278 NSVVYVALGTE----ASLRREEVTELALGLEKSETP--F----FWVLRNEPGTTQNALEMLPDGFEERVK-GRGMIHVGW 346 (472)
T ss_pred CceEEEEeccc----ccCCHHHHHHHHHHHHHCCCC--E----EEEEcCCcccccchhhcCChHHHHhcc-CCCeEEeCc
Confidence 36778887665 46677777666653 23333 2 233342111 111 110 000011 237999999
Q ss_pred cccccccCCCCC------ChhHHHHHHHHcCCceeccCCChhhhHHH--HH---HH--Hh----cCCCcHHHHHHHhhHH
Q 040637 291 QGIDRITSPPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFIDD--LT---DL--VK----NNVITMDRIDDAVGRI 353 (453)
Q Consensus 291 ~~m~~i~~~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~~~--l~---~a--v~----~g~i~~~rid~av~RI 353 (453)
.-...|-.+... ---.++.+|+.+|+=|+++|.-.++...+ +. -. +. +|.++.+.|.++++++
T Consensus 347 ~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~v 426 (472)
T PLN02670 347 VPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLA 426 (472)
T ss_pred CCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHH
Confidence 855555432110 00246899999999999998544333221 11 11 11 2458899999999999
Q ss_pred HH
Q 040637 354 LL 355 (453)
Q Consensus 354 L~ 355 (453)
+.
T Consensus 427 m~ 428 (472)
T PLN02670 427 MV 428 (472)
T ss_pred hc
Confidence 84
No 28
>TIGR01334 modD putative molybdenum utilization protein ModD. The gene modD for a member of this family is found with molybdenum transport genes modABC in Rhodobacter capsulatus. However, disruption of modD causes only a 4-fold (rather than 500-fold for modA, modB, modC) change in the external molybdenum concentration required to suppress an alternative nitrogenase. ModD proteins are highly similar to nicotinate-nucleotide pyrophosphorylase (also called quinolinate phosphoribosyltransferase). The function unknown.
Probab=26.34 E-value=2.2e+02 Score=28.87 Aligned_cols=18 Identities=17% Similarity=0.176 Sum_probs=14.8
Q ss_pred hHHHHHHHHcCCceeccC
Q 040637 305 TYSVQSGIQAGIDMVMIP 322 (453)
Q Consensus 305 ~~~~~~ai~AG~D~~~~~ 322 (453)
.+.+..++++|+|++|..
T Consensus 198 leea~ea~~~GaDiI~lD 215 (277)
T TIGR01334 198 IEQALTVLQASPDILQLD 215 (277)
T ss_pred HHHHHHHHHcCcCEEEEC
Confidence 355788999999999864
No 29
>PLN02208 glycosyltransferase family protein
Probab=26.08 E-value=1.8e+02 Score=31.23 Aligned_cols=73 Identities=18% Similarity=0.302 Sum_probs=46.9
Q ss_pred cceEEeeccccccccCCCCC------ChhHHHHHHHHcCCceeccCCChhhhHHH--HHH----H--Hh---cCCCcHHH
Q 040637 283 EGFVISDWQGIDRITSPPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFIDD--LTD----L--VK---NNVITMDR 345 (453)
Q Consensus 283 ~G~ViSD~~~m~~i~~~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~~~--l~~----a--v~---~g~i~~~r 345 (453)
.|+|+.+|.-...|-.+... ---.++.+|+.+|+=|+++|.-.+++..+ +.+ . +. +|.++.+.
T Consensus 311 ~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~ 390 (442)
T PLN02208 311 RGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKES 390 (442)
T ss_pred CCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHH
Confidence 49999999854444332210 00247899999999999998654443322 222 1 11 13488899
Q ss_pred HHHHhhHHHH
Q 040637 346 IDDAVGRILL 355 (453)
Q Consensus 346 id~av~RIL~ 355 (453)
|.+++++++.
T Consensus 391 l~~ai~~~m~ 400 (442)
T PLN02208 391 LSNAIKSVMD 400 (442)
T ss_pred HHHHHHHHhc
Confidence 9999999873
No 30
>PLN02554 UDP-glycosyltransferase family protein
Probab=25.64 E-value=1.3e+02 Score=32.51 Aligned_cols=69 Identities=16% Similarity=0.254 Sum_probs=44.7
Q ss_pred cceEEeeccccccccC---------CCCCChhHHHHHHHHcCCceeccCCChhhhHHH--HHHH----Hh----------
Q 040637 283 EGFVISDWQGIDRITS---------PPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDD--LTDL----VK---------- 337 (453)
Q Consensus 283 ~G~ViSD~~~m~~i~~---------~~~~~~~~~~~~ai~AG~D~~~~~~~~~~~~~~--l~~a----v~---------- 337 (453)
.|+|+ +|.-...|-. +.+ -.++.+|+.+|+=|+++|...+++..+ +.+. +.
T Consensus 343 ~g~v~-~W~PQ~~iL~H~~v~~FvtH~G---~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~ 418 (481)
T PLN02554 343 IGKVI-GWAPQVAVLAKPAIGGFVTHCG---WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLL 418 (481)
T ss_pred CceEE-eeCCHHHHhCCcccCcccccCc---cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccccccc
Confidence 46565 8974443332 222 246899999999999998655444433 1221 11
Q ss_pred ---cCCCcHHHHHHHhhHHHH
Q 040637 338 ---NNVITMDRIDDAVGRILL 355 (453)
Q Consensus 338 ---~g~i~~~rid~av~RIL~ 355 (453)
.+.++.+.|.+++++++.
T Consensus 419 ~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 419 AGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred ccccCeEcHHHHHHHHHHHhc
Confidence 146789999999999984
No 31
>PLN03015 UDP-glucosyl transferase
Probab=25.03 E-value=1.9e+02 Score=31.46 Aligned_cols=71 Identities=24% Similarity=0.433 Sum_probs=45.6
Q ss_pred ceEEeeccccccccCCCC-------CChhHHHHHHHHcCCceeccCCChhhhHHH--HHH----HH------hcCCCcHH
Q 040637 284 GFVISDWQGIDRITSPPH-------SNYTYSVQSGIQAGIDMVMIPFNLTEFIDD--LTD----LV------KNNVITMD 344 (453)
Q Consensus 284 G~ViSD~~~m~~i~~~~~-------~~~~~~~~~ai~AG~D~~~~~~~~~~~~~~--l~~----av------~~g~i~~~ 344 (453)
|++|..|.-...+-.+.. .. -.++.+|+.+|+=|+++|.-.++...+ +.+ .+ ..+.++.+
T Consensus 336 Gl~v~~W~PQ~~vL~h~~vg~fvtH~G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e 414 (470)
T PLN03015 336 GLVVTQWAPQVEILSHRSIGGFLSHCG-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGRE 414 (470)
T ss_pred ceEEEecCCHHHHhccCccCeEEecCC-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHH
Confidence 799999985444433211 10 246899999999999998643333222 111 11 12468999
Q ss_pred HHHHHhhHHHH
Q 040637 345 RIDDAVGRILL 355 (453)
Q Consensus 345 rid~av~RIL~ 355 (453)
.|.++|++++.
T Consensus 415 ~i~~~v~~lm~ 425 (470)
T PLN03015 415 EVASLVRKIVA 425 (470)
T ss_pred HHHHHHHHHHc
Confidence 99999999873
No 32
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=24.78 E-value=1.8e+02 Score=31.45 Aligned_cols=126 Identities=21% Similarity=0.291 Sum_probs=67.1
Q ss_pred ceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeeccccc-Cchh----HHH-HhhhhccccceEEeecccc
Q 040637 220 STIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNT-STSD----LRR-ILTLTKILEGFVISDWQGI 293 (453)
Q Consensus 220 ~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~-~~~~----~~~-~~~~~~~~~G~ViSD~~~m 293 (453)
+.|.+|+-+.- .++.+-+.++..+==.....|-+|+ |-.. ...+ |.. .+.-++ -.|+|+ +|.-.
T Consensus 265 sVvyvsfGS~~----~~~~~q~~ela~gLe~s~~~FlWv~----r~~~~~~~~~~~~lp~~f~er~~-~~g~v~-~w~PQ 334 (451)
T PLN02410 265 SVIFVSLGSLA----LMEINEVMETASGLDSSNQQFLWVI----RPGSVRGSEWIESLPKEFSKIIS-GRGYIV-KWAPQ 334 (451)
T ss_pred cEEEEEccccc----cCCHHHHHHHHHHHHhcCCCeEEEE----ccCcccccchhhcCChhHHHhcc-CCeEEE-ccCCH
Confidence 67888876653 5667667776663333332233332 2110 0111 111 000111 347666 78754
Q ss_pred ccccCCCCC------ChhHHHHHHHHcCCceeccCCChhhhHH--HHHHHHhc-----CCCcHHHHHHHhhHHHH
Q 040637 294 DRITSPPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFID--DLTDLVKN-----NVITMDRIDDAVGRILL 355 (453)
Q Consensus 294 ~~i~~~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~~--~l~~av~~-----g~i~~~rid~av~RIL~ 355 (453)
..|-.+... .--.++.+|+.+|+=|+++|...+++.. .+.+...- +.++.+.|.+++++++.
T Consensus 335 ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~ 409 (451)
T PLN02410 335 KEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRLMV 409 (451)
T ss_pred HHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHc
Confidence 444332110 0024789999999999999865444332 22222122 46788999999999873
No 33
>COG2003 RadC DNA repair proteins [DNA replication, recombination, and repair]
Probab=23.38 E-value=61 Score=32.00 Aligned_cols=66 Identities=17% Similarity=0.288 Sum_probs=46.0
Q ss_pred CCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHhhhcCCceEEEeccCCCCc--cccCCHHHHHHHHhhh
Q 040637 171 KDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGE--KMHANRELVTGFLKGT 248 (453)
Q Consensus 171 ~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~i~~g~~~iM~sy~~ing~--pa~~s~~ll~~~LR~~ 248 (453)
++.|++.--=|-|- .+.+.+.+++ -|+.+++..+.+||++||--.|. |...+. .+|.-|++-
T Consensus 133 qnrlI~~e~lf~GT--------i~~s~V~PRE-------I~k~Al~~nAaavIlaHNHPSGd~~PS~aD~-~iT~rl~~a 196 (224)
T COG2003 133 QNRLIATETLFIGT--------LNVSEVHPRE-------IFKEALKYNAAAVILAHNHPSGDPTPSRADI-LITERLKEA 196 (224)
T ss_pred cCceecceeEEeee--------cccceecHHH-------HHHHHHHhcchhhheeccCCCCCCCcCHHHH-HHHHHHHHH
Confidence 46666654445441 1223356777 47889999999999999988775 444444 568889999
Q ss_pred cCCc
Q 040637 249 LKFK 252 (453)
Q Consensus 249 lgF~ 252 (453)
.++-
T Consensus 197 ~~ll 200 (224)
T COG2003 197 GKLL 200 (224)
T ss_pred HHhc
Confidence 8888
No 34
>PLN03004 UDP-glycosyltransferase
Probab=22.80 E-value=2.2e+02 Score=30.78 Aligned_cols=127 Identities=18% Similarity=0.232 Sum_probs=69.5
Q ss_pred CceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecc-cccCch---hHHHHhhhhcc------ccceEEe
Q 040637 219 VSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHR-YNTSTS---DLRRILTLTKI------LEGFVIS 288 (453)
Q Consensus 219 ~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~------~~G~ViS 288 (453)
-+.|.+|+-+. ++++.+-+..+...=-.....|- +.-| -...+. ++... |.+. -.|+++.
T Consensus 270 ~sVvyvsfGS~----~~~~~~q~~ela~gL~~s~~~Fl----W~~r~~~~~~~~~~~~~~~--lp~gf~er~~~~g~~v~ 339 (451)
T PLN03004 270 KSVVFLCFGSL----GLFSKEQVIEIAVGLEKSGQRFL----WVVRNPPELEKTELDLKSL--LPEGFLSRTEDKGMVVK 339 (451)
T ss_pred CceEEEEeccc----ccCCHHHHHHHHHHHHHCCCCEE----EEEcCCccccccccchhhh--CChHHHHhccCCcEEEE
Confidence 46888888776 56677666666553222221222 2222 110001 12111 1111 1499999
Q ss_pred eccccccccCCCCC------ChhHHHHHHHHcCCceeccCCChhhhHH--HHHH----H--Hh---cCCCcHHHHHHHhh
Q 040637 289 DWQGIDRITSPPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFID--DLTD----L--VK---NNVITMDRIDDAVG 351 (453)
Q Consensus 289 D~~~m~~i~~~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~~--~l~~----a--v~---~g~i~~~rid~av~ 351 (453)
+|.-...|-.+... ---.++.+|+.+|+=|+++|.-.++... .+.+ . +. .|.++.+.|.++++
T Consensus 340 ~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~ 419 (451)
T PLN03004 340 SWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQ 419 (451)
T ss_pred eeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHH
Confidence 99855544432210 0024789999999999999854333222 2222 1 22 23678999999999
Q ss_pred HHHH
Q 040637 352 RILL 355 (453)
Q Consensus 352 RIL~ 355 (453)
+++.
T Consensus 420 ~vm~ 423 (451)
T PLN03004 420 EIIG 423 (451)
T ss_pred HHhc
Confidence 9873
No 35
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=22.45 E-value=1.4e+02 Score=20.39 Aligned_cols=26 Identities=19% Similarity=0.138 Sum_probs=22.7
Q ss_pred cCCCcHHHHHHHhhHHHHHHHHhCCC
Q 040637 338 NNVITMDRIDDAVGRILLVKFSMGLF 363 (453)
Q Consensus 338 ~g~i~~~rid~av~RIL~~K~~~Glf 363 (453)
.|.|+.+.+-+++.||...+.+.|-.
T Consensus 2 ~~~i~~~~~~d~a~rv~~f~~~ngRl 27 (33)
T PF09373_consen 2 SGTISKEEYLDMASRVNNFYESNGRL 27 (33)
T ss_pred CceecHHHHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999887753
No 36
>PRK00024 hypothetical protein; Reviewed
Probab=21.74 E-value=1.3e+02 Score=29.34 Aligned_cols=90 Identities=14% Similarity=0.157 Sum_probs=53.1
Q ss_pred CCHHHHHHHHH-HHhhccCCCCCCCCCCccccCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHhhh
Q 040637 138 EDHKIVQEMTD-VILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSII 216 (453)
Q Consensus 138 eDp~lv~~~~~-~i~Glq~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~i~ 216 (453)
.+|..+.++-. ...+... +.=-+-|.+.++.++++-.-|-|- .+.+.+++++ -|+.++.
T Consensus 104 ~~~~~~~~~l~~~l~~~~~-----E~f~vl~Ld~~~~li~~~~i~~Gt--------~~~~~v~pRe-------i~~~Al~ 163 (224)
T PRK00024 104 LSPEDVADYLMAELRDEEQ-----EHFVVLFLDTKNRVIADEELFIGT--------LNSSIVHPRE-------IVKRALK 163 (224)
T ss_pred CCHHHHHHHHHHHccCCCc-----eEEEEEEECCCCCEeeEEEeeeec--------CCeEEEcHHH-------HHHHHHH
Confidence 34666666654 4444331 111222344456677766555431 1233456777 4789999
Q ss_pred cCCceEEEeccCCCCc--cccCCHHHHHHHHhhh
Q 040637 217 KGVSTIMVSYSSWNGE--KMHANRELVTGFLKGT 248 (453)
Q Consensus 217 ~g~~~iM~sy~~ing~--pa~~s~~ll~~~LR~~ 248 (453)
.++.+|..+||.-+|. |...+..+ |.-|++-
T Consensus 164 ~~A~~iIl~HNHPSG~~~PS~~D~~~-T~~l~~a 196 (224)
T PRK00024 164 LNAAALILAHNHPSGDPEPSQADILI-TKRLKEA 196 (224)
T ss_pred hhccceEEEecCCCCCCCCCHHHHHH-HHHHHHH
Confidence 9999999999998875 55555544 5555543
No 37
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=21.24 E-value=1.4e+02 Score=26.30 Aligned_cols=65 Identities=14% Similarity=0.207 Sum_probs=38.0
Q ss_pred cCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHhhhcCCceEEEeccCCCCc--cccCCHHHHHHHH
Q 040637 168 VGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGE--KMHANRELVTGFL 245 (453)
Q Consensus 168 ~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~i~~g~~~iM~sy~~ing~--pa~~s~~ll~~~L 245 (453)
.+.++.++++-.-|-|.- +.+.++.+++ |+.++..++.+|+.+||.-+|. |...+.. +|.-|
T Consensus 29 Ld~~~~li~~~~v~~G~~--------~~~~v~~R~I-------~~~al~~~A~~vIl~HNHPsG~~~PS~~D~~-~T~~L 92 (123)
T PF04002_consen 29 LDSKNRLIGDEVVSEGTI--------DSAPVDPREI-------FRRALRLNASSVILAHNHPSGDPEPSDADIA-LTRRL 92 (123)
T ss_dssp E-TTSBEEEEEEEEESTT---------GGGCSHHHH-------HHHHHHTT-SEEEEEEE-TTS--S--HHHHH-HHHHH
T ss_pred ECCCCcEEEEEEecccCC--------CcccccHHHH-------HHHHHhhCCceEEEEEEcCCCCCCCCHhHHH-HHHHH
Confidence 344577777777665521 2233567764 6889999999999999988875 4333333 34555
Q ss_pred hhh
Q 040637 246 KGT 248 (453)
Q Consensus 246 R~~ 248 (453)
++-
T Consensus 93 ~~~ 95 (123)
T PF04002_consen 93 KKA 95 (123)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 38
>PRK13533 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional
Probab=20.38 E-value=1.1e+02 Score=33.72 Aligned_cols=38 Identities=11% Similarity=0.061 Sum_probs=25.2
Q ss_pred ceEEeeccccccccC-CCCCChhHHHHHHHHcCCceecc
Q 040637 284 GFVISDWQGIDRITS-PPHSNYTYSVQSGIQAGIDMVMI 321 (453)
Q Consensus 284 G~ViSD~~~m~~i~~-~~~~~~~~~~~~ai~AG~D~~~~ 321 (453)
|.|+||.++-+-..- ....+.++.+.---.-|.|+.|.
T Consensus 83 g~ilTDSGgfQv~s~g~~~ltpe~~i~~Q~~iGsDI~~~ 121 (487)
T PRK13533 83 GPIMTDSGSYQLLVYGDVEVTNEEILEFQRKIGSDIGVP 121 (487)
T ss_pred CCeEeccCCcEEEEcCCccCCHHHHHHHHHHhCCCEEeE
Confidence 999999997554332 12344455555555679999885
No 39
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=20.32 E-value=8.5e+02 Score=26.65 Aligned_cols=128 Identities=13% Similarity=0.241 Sum_probs=69.4
Q ss_pred HHhhhcCC-ceEEEeccCCCCccccCCHHHHHHHHhh--hcCCccccceeeeeecccccCchhHHHHhhhhccccceEEe
Q 040637 212 SDSIIKGV-STIMVSYSSWNGEKMHANRELVTGFLKG--TLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVIS 288 (453)
Q Consensus 212 ~~~i~~g~-~~iM~sy~~ing~pa~~s~~ll~~~LR~--~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViS 288 (453)
..-++++. ..|.+|.-+.-. ......+.+..+++. .++.+ | +-.|...... ...-+.+.++
T Consensus 288 ~~fl~~~~~g~V~vS~GS~~~-~~~~~~~~~~~~l~a~~~l~~~----v----iw~~~~~~~~-------~~~p~Nv~i~ 351 (507)
T PHA03392 288 EEFLNNSTNGVVYVSFGSSID-TNDMDNEFLQMLLRTFKKLPYN----V----LWKYDGEVEA-------INLPANVLTQ 351 (507)
T ss_pred HHHHhcCCCcEEEEECCCCCc-CCCCCHHHHHHHHHHHHhCCCe----E----EEEECCCcCc-------ccCCCceEEe
Confidence 34445444 478888755311 122344555555553 45544 1 1234332211 0112488999
Q ss_pred eccccccccCCCC------CChhHHHHHHHHcCCceeccCCChhhhH--HHHHH-----HHhcCCCcHHHHHHHhhHHHH
Q 040637 289 DWQGIDRITSPPH------SNYTYSVQSGIQAGIDMVMIPFNLTEFI--DDLTD-----LVKNNVITMDRIDDAVGRILL 355 (453)
Q Consensus 289 D~~~m~~i~~~~~------~~~~~~~~~ai~AG~D~~~~~~~~~~~~--~~l~~-----av~~g~i~~~rid~av~RIL~ 355 (453)
+|.-...+-.++. ..-..++.+|+.+|+=|+.+|.-.++.. ..+.+ .+....++.++|.+|++++|.
T Consensus 352 ~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~ 431 (507)
T PHA03392 352 KWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIE 431 (507)
T ss_pred cCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhC
Confidence 9985554432111 0002468899999999999986443322 11211 122346788999999999984
No 40
>PF08044 DUF1707: Domain of unknown function (DUF1707); InterPro: IPR012551 This domain is found in a variety of actinomycetales proteins. All of the proteins containing this domain are hypothetical and probably membrane bound or associated. Currently, it is unclear to the function of this domain.
Probab=20.26 E-value=1.4e+02 Score=22.63 Aligned_cols=34 Identities=12% Similarity=0.225 Sum_probs=29.2
Q ss_pred hhhHHHHHHHHhcCCCcHHHHHHHhhHHHHHHHH
Q 040637 326 TEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFS 359 (453)
Q Consensus 326 ~~~~~~l~~av~~g~i~~~rid~av~RIL~~K~~ 359 (453)
....+.|..++.+|.|+.+..++-+.+++..+..
T Consensus 9 ~~~~~~L~~a~a~GrL~~~Ef~~R~~~a~~A~t~ 42 (53)
T PF08044_consen 9 ERAVDLLRAAFAEGRLSLDEFDERLDAAYAARTR 42 (53)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHhcCcH
Confidence 4577889999999999999999999988877654
No 41
>PLN02534 UDP-glycosyltransferase
Probab=20.05 E-value=2.3e+02 Score=31.01 Aligned_cols=73 Identities=23% Similarity=0.398 Sum_probs=46.1
Q ss_pred cceEEeeccccccccCCCCC------ChhHHHHHHHHcCCceeccCCChhhhHH--HHHH----HHh------------c
Q 040637 283 EGFVISDWQGIDRITSPPHS------NYTYSVQSGIQAGIDMVMIPFNLTEFID--DLTD----LVK------------N 338 (453)
Q Consensus 283 ~G~ViSD~~~m~~i~~~~~~------~~~~~~~~ai~AG~D~~~~~~~~~~~~~--~l~~----av~------------~ 338 (453)
.|+++..|.-...+-.+... .--.++.+|+.+|+=|+++|...+.... .+.+ .|+ +
T Consensus 344 ~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~ 423 (491)
T PLN02534 344 RGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEE 423 (491)
T ss_pred CCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccc
Confidence 48999999855444332110 0134789999999999999864433222 1221 111 1
Q ss_pred --C-CCcHHHHHHHhhHHHH
Q 040637 339 --N-VITMDRIDDAVGRILL 355 (453)
Q Consensus 339 --g-~i~~~rid~av~RIL~ 355 (453)
| .++.+.|.++|+|++.
T Consensus 424 ~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 424 RVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred cccCccCHHHHHHHHHHHhc
Confidence 2 4889999999999973
Done!