Query 040641
Match_columns 435
No_of_seqs 543 out of 3258
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 16:40:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.6E-52 1.2E-56 386.8 15.7 239 179-434 9-288 (299)
2 4aoj_A High affinity nerve gro 100.0 8.4E-52 2.9E-56 389.5 17.6 238 180-434 38-318 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 8.9E-52 3.1E-56 385.7 16.0 239 179-434 22-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 2.4E-50 8.1E-55 374.6 17.5 240 177-434 30-299 (307)
5 4ase_A Vascular endothelial gr 100.0 1.9E-49 6.3E-54 376.5 12.3 246 173-434 54-346 (353)
6 3hmm_A TGF-beta receptor type- 100.0 4.5E-48 1.5E-52 361.5 16.9 241 183-434 3-296 (303)
7 4fih_A Serine/threonine-protei 100.0 1.4E-47 4.8E-52 360.4 15.9 228 180-428 71-323 (346)
8 4b9d_A Serine/threonine-protei 100.0 2.8E-47 9.6E-52 358.9 14.4 228 181-428 22-276 (350)
9 3fpq_A Serine/threonine-protei 100.0 2E-46 6.7E-51 345.8 19.4 221 185-428 28-282 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-46 4.6E-51 352.7 17.9 230 181-434 56-315 (336)
11 4fie_A Serine/threonine-protei 100.0 1.8E-46 6.3E-51 361.4 16.7 228 180-428 148-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.9E-45 6.6E-50 340.8 12.2 223 183-427 32-283 (311)
13 3hyh_A Carbon catabolite-derep 100.0 3.8E-44 1.3E-48 327.6 17.4 221 183-428 13-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 7.2E-45 2.5E-49 337.0 12.2 223 183-428 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 1.2E-43 4.2E-48 329.9 15.9 226 183-428 5-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 7.4E-42 2.5E-46 323.4 17.9 255 179-434 35-314 (321)
17 3uim_A Brassinosteroid insensi 100.0 1.8E-41 6.1E-46 321.4 13.9 258 176-433 23-309 (326)
18 3uto_A Twitchin; kinase, muscl 100.0 1E-40 3.5E-45 337.2 17.5 228 182-428 156-410 (573)
19 4b99_A Mitogen-activated prote 100.0 1.5E-40 5E-45 320.8 17.2 236 183-428 54-344 (398)
20 4f9c_A Cell division cycle 7-r 100.0 4.7E-40 1.6E-44 313.9 14.0 173 182-363 20-250 (361)
21 3s95_A LIMK-1, LIM domain kina 100.0 5E-39 1.7E-43 302.4 19.3 234 181-434 8-281 (310)
22 3p86_A Serine/threonine-protei 100.0 2.3E-39 7.9E-44 304.4 15.7 240 176-434 30-297 (309)
23 1qcf_A Haematopoetic cell kina 100.0 1.8E-39 6.2E-44 321.3 14.8 239 175-434 180-443 (454)
24 2psq_A Fibroblast growth facto 100.0 5.1E-39 1.7E-43 309.6 16.9 240 178-434 76-363 (370)
25 4hcu_A Tyrosine-protein kinase 100.0 9.5E-39 3.2E-43 294.3 16.6 236 178-434 5-265 (269)
26 3fxz_A Serine/threonine-protei 100.0 2E-38 6.9E-43 296.4 18.5 228 180-428 17-269 (297)
27 1opk_A P150, C-ABL, proto-onco 100.0 5.2E-39 1.8E-43 321.0 14.8 239 176-434 213-477 (495)
28 3soc_A Activin receptor type-2 100.0 8.8E-39 3E-43 302.3 15.1 245 178-434 19-317 (322)
29 3cbl_A C-FES, proto-oncogene t 100.0 2.5E-39 8.7E-44 312.7 11.2 238 177-434 108-373 (377)
30 3v5w_A G-protein coupled recep 100.0 2.6E-38 9E-43 318.1 18.6 225 181-427 187-448 (689)
31 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-38 4E-43 315.2 14.9 238 176-434 177-439 (452)
32 2qol_A Ephrin receptor; recept 100.0 1E-38 3.5E-43 307.7 13.9 234 181-434 43-308 (373)
33 3gen_A Tyrosine-protein kinase 100.0 1.4E-38 4.9E-43 295.3 14.0 238 176-434 17-279 (283)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.5E-38 1.2E-42 290.2 16.4 236 179-435 4-264 (268)
35 3kul_A Ephrin type-A receptor 100.0 1.8E-38 6.3E-43 300.5 14.4 235 180-434 46-312 (325)
36 1k9a_A Carboxyl-terminal SRC k 100.0 5.6E-38 1.9E-42 310.1 18.2 232 177-434 187-444 (450)
37 3vhe_A Vascular endothelial gr 100.0 1.9E-38 6.6E-43 304.6 13.5 246 173-434 12-354 (359)
38 3ugc_A Tyrosine-protein kinase 100.0 2.7E-38 9.3E-43 295.2 14.0 242 181-434 8-290 (295)
39 4eqm_A Protein kinase; transfe 100.0 6.1E-38 2.1E-42 292.7 16.1 236 182-434 10-274 (294)
40 3zgw_A Maternal embryonic leuc 100.0 8.8E-38 3E-42 297.6 17.5 227 180-428 7-260 (347)
41 2c30_A Serine/threonine-protei 100.0 2E-37 6.8E-42 292.9 19.5 224 184-428 46-294 (321)
42 3l9p_A Anaplastic lymphoma kin 100.0 2.3E-38 7.9E-43 304.7 12.6 239 179-434 67-344 (367)
43 1luf_A Muscle-specific tyrosin 100.0 6.5E-38 2.2E-42 299.0 15.4 241 178-435 42-335 (343)
44 3t9t_A Tyrosine-protein kinase 100.0 1.2E-37 4E-42 286.5 16.0 236 178-434 3-263 (267)
45 3fe3_A MAP/microtubule affinit 100.0 2.2E-37 7.5E-42 293.0 18.1 223 182-428 14-264 (328)
46 4euu_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 290.1 20.3 249 182-433 8-307 (319)
47 1mp8_A Focal adhesion kinase 1 100.0 9.6E-38 3.3E-42 289.5 15.0 237 177-434 9-275 (281)
48 3q4u_A Activin receptor type-1 100.0 2.4E-37 8E-42 289.6 17.6 236 182-433 7-300 (301)
49 3tt0_A Basic fibroblast growth 100.0 1.2E-37 4E-42 301.6 15.8 241 177-434 63-351 (382)
50 2h8h_A Proto-oncogene tyrosine 100.0 2.5E-38 8.6E-43 318.9 11.5 238 176-434 260-522 (535)
51 3lb7_A RAF proto-oncogene seri 100.0 3.3E-37 1.1E-41 289.5 18.1 240 177-434 30-299 (307)
52 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-37 4.1E-42 293.4 14.6 242 176-434 16-310 (314)
53 2nru_A Interleukin-1 receptor- 100.0 6E-37 2.1E-41 287.7 18.6 244 185-434 33-305 (307)
54 3c0i_A Peripheral plasma membr 100.0 3.7E-37 1.3E-41 294.7 16.6 230 183-428 24-286 (351)
55 3kmu_A ILK, integrin-linked ki 100.0 6.7E-37 2.3E-41 281.9 17.4 238 179-435 6-270 (271)
56 1rjb_A FL cytokine receptor; k 100.0 3.2E-37 1.1E-41 294.4 15.0 242 177-434 39-333 (344)
57 1t46_A HOMO sapiens V-KIT hard 100.0 3.6E-37 1.2E-41 290.0 15.1 242 177-434 17-306 (313)
58 4fvq_A Tyrosine-protein kinase 100.0 3.6E-37 1.2E-41 286.7 14.7 229 180-434 5-274 (289)
59 2yab_A Death-associated protei 100.0 1.3E-36 4.4E-41 291.2 18.9 227 182-428 11-272 (361)
60 2ozo_A Tyrosine-protein kinase 100.0 5.9E-37 2E-41 313.3 17.3 233 181-434 333-597 (613)
61 3kfa_A Tyrosine-protein kinase 100.0 5.1E-37 1.8E-41 285.5 15.1 238 177-434 7-270 (288)
62 2pvf_A Fibroblast growth facto 100.0 4.5E-37 1.6E-41 292.2 15.0 241 177-434 29-317 (334)
63 1kob_A Twitchin; kinase, intra 100.0 1.1E-36 3.9E-41 294.2 18.0 228 182-428 50-304 (387)
64 2h34_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 282.3 21.3 234 182-434 33-295 (309)
65 3qup_A Tyrosine-protein kinase 100.0 5.5E-37 1.9E-41 290.2 15.3 241 177-434 17-297 (323)
66 3dtc_A Mitogen-activated prote 100.0 6.6E-37 2.3E-41 282.1 15.5 229 180-433 4-271 (271)
67 2buj_A Serine/threonine-protei 100.0 3E-37 1E-41 291.1 13.4 244 176-434 22-305 (317)
68 2eva_A TAK1 kinase - TAB1 chim 100.0 5.8E-37 2E-41 287.9 15.2 230 180-434 5-262 (307)
69 1o6l_A RAC-beta serine/threoni 100.0 4.1E-36 1.4E-40 285.2 21.2 224 182-428 4-260 (337)
70 2wqm_A Serine/threonine-protei 100.0 1.4E-36 4.6E-41 285.8 17.6 239 181-434 30-296 (310)
71 3poz_A Epidermal growth factor 100.0 7.2E-37 2.5E-41 289.9 15.7 232 182-434 14-277 (327)
72 3gxj_A TGF-beta receptor type- 100.0 1.1E-37 3.7E-42 292.1 9.9 235 183-434 3-296 (303)
73 4e5w_A Tyrosine-protein kinase 100.0 8.9E-37 3.1E-41 285.8 16.0 243 181-435 19-302 (302)
74 1qpc_A LCK kinase; alpha beta 100.0 3.2E-37 1.1E-41 285.6 12.6 237 177-434 7-268 (279)
75 1tki_A Titin; serine kinase, m 100.0 1E-36 3.5E-41 287.8 16.2 227 182-428 4-257 (321)
76 4eut_A Serine/threonine-protei 100.0 5.9E-37 2E-41 298.0 15.0 248 182-435 8-309 (396)
77 3niz_A Rhodanese family protei 100.0 1.1E-36 3.8E-41 286.4 16.3 241 179-428 17-300 (311)
78 3cc6_A Protein tyrosine kinase 100.0 9.6E-37 3.3E-41 282.7 15.4 235 179-434 8-272 (281)
79 2x4f_A Myosin light chain kina 100.0 1.4E-36 4.6E-41 292.8 17.0 225 185-428 91-342 (373)
80 2y0a_A Death-associated protei 100.0 1.9E-36 6.7E-41 286.7 17.7 226 183-428 11-271 (326)
81 3og7_A AKAP9-BRAF fusion prote 100.0 1.9E-36 6.5E-41 281.9 17.0 240 177-434 18-287 (289)
82 2bdw_A Hypothetical protein K1 100.0 1.7E-36 5.8E-41 291.0 17.0 226 183-428 29-284 (362)
83 4f0f_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 279.7 18.6 230 181-433 17-287 (287)
84 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.6E-36 9E-41 286.2 17.1 222 182-428 8-258 (336)
85 3soa_A Calcium/calmodulin-depe 100.0 3.6E-36 1.2E-40 295.6 18.6 227 183-428 11-267 (444)
86 3uc3_A Serine/threonine-protei 100.0 1.9E-36 6.6E-41 290.6 16.2 229 181-428 18-274 (361)
87 1ob3_A PFPK5, cell division co 100.0 2.8E-36 9.7E-41 280.6 16.8 237 183-428 2-280 (288)
88 3op5_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 292.5 14.8 243 181-434 33-328 (364)
89 3c1x_A Hepatocyte growth facto 100.0 8.2E-37 2.8E-41 294.2 13.3 232 183-434 89-354 (373)
90 2izr_A Casein kinase I isoform 100.0 1.8E-36 6E-41 287.6 15.2 235 183-434 9-280 (330)
91 3is5_A Calcium-dependent prote 100.0 3.8E-36 1.3E-40 279.3 16.7 228 183-428 22-278 (285)
92 1mqb_A Ephrin type-A receptor 100.0 2.4E-36 8.4E-41 286.9 15.8 236 179-434 40-308 (333)
93 2w4o_A Calcium/calmodulin-depe 100.0 1.6E-36 5.4E-41 289.9 14.5 226 182-428 52-305 (349)
94 1csn_A Casein kinase-1; phosph 100.0 2.9E-36 1E-40 281.7 15.9 237 182-434 9-282 (298)
95 2xir_A Vascular endothelial gr 100.0 9.3E-37 3.2E-41 287.5 12.7 245 174-434 18-309 (316)
96 3lxl_A Tyrosine-protein kinase 100.0 9.4E-38 3.2E-42 296.0 5.8 242 181-434 21-302 (327)
97 1u59_A Tyrosine-protein kinase 100.0 2.2E-36 7.5E-41 281.2 14.6 234 180-434 6-271 (287)
98 1p4o_A Insulin-like growth fac 100.0 6.2E-36 2.1E-40 282.7 17.5 242 176-434 18-298 (322)
99 3hko_A Calcium/calmodulin-depe 100.0 2.5E-36 8.5E-41 288.3 14.9 233 182-428 25-330 (345)
100 3qd2_B Eukaryotic translation 100.0 8.4E-37 2.9E-41 289.7 11.4 226 183-428 6-325 (332)
101 2i1m_A Macrophage colony-stimu 100.0 1.8E-36 6.1E-41 287.9 13.7 242 177-434 40-325 (333)
102 3tki_A Serine/threonine-protei 100.0 8E-37 2.7E-41 288.9 11.2 228 182-428 6-261 (323)
103 4fl3_A Tyrosine-protein kinase 100.0 2.8E-36 9.6E-41 309.1 15.7 231 182-434 367-630 (635)
104 2w1i_A JAK2; chromosomal rearr 100.0 2.6E-36 8.9E-41 285.9 14.3 242 181-434 39-321 (326)
105 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-37 3.9E-42 294.2 4.9 238 183-434 31-309 (318)
106 3brb_A Proto-oncogene tyrosine 100.0 3.9E-36 1.3E-40 283.1 15.3 242 176-434 27-307 (313)
107 3o0g_A Cell division protein k 100.0 6.1E-36 2.1E-40 278.9 16.2 238 183-428 2-282 (292)
108 3v8s_A RHO-associated protein 100.0 1.4E-36 4.7E-41 295.3 12.2 231 179-428 65-329 (410)
109 3ork_A Serine/threonine protei 100.0 1.9E-36 6.5E-41 284.9 12.8 232 182-431 11-277 (311)
110 2v62_A Serine/threonine-protei 100.0 8.4E-37 2.9E-41 291.6 10.4 240 182-433 36-326 (345)
111 4aw2_A Serine/threonine-protei 100.0 1.4E-36 4.6E-41 297.6 11.8 234 179-428 70-338 (437)
112 2zv2_A Calcium/calmodulin-depe 100.0 3E-36 1E-40 281.8 13.7 225 182-428 12-292 (298)
113 4dc2_A Protein kinase C IOTA t 100.0 1E-35 3.5E-40 287.7 17.8 228 181-423 50-307 (396)
114 3mdy_A Bone morphogenetic prot 100.0 1.3E-35 4.3E-40 282.4 18.0 237 182-434 36-330 (337)
115 3f3z_A Calcium/calmodulin-depe 100.0 1.6E-35 5.6E-40 273.7 18.3 225 183-428 9-261 (277)
116 3kn6_A Ribosomal protein S6 ki 100.0 3.3E-36 1.1E-40 285.0 13.9 226 188-428 16-270 (325)
117 4fr4_A YANK1, serine/threonine 100.0 2.3E-35 7.8E-40 284.3 19.7 226 181-427 13-270 (384)
118 3kex_A Receptor tyrosine-prote 100.0 2E-36 6.8E-41 286.6 12.1 232 182-434 12-275 (325)
119 1fot_A TPK1 delta, CAMP-depend 100.0 2.5E-35 8.7E-40 277.7 19.5 221 182-428 5-258 (318)
120 3gni_B Strad alpha; kinase fol 100.0 1.1E-35 3.7E-40 288.6 17.5 183 178-362 20-239 (389)
121 1u5q_A Serine/threonine protei 100.0 8.9E-36 3E-40 284.5 16.3 224 180-428 51-305 (348)
122 1b6c_B TGF-B superfamily recep 100.0 9.3E-36 3.2E-40 283.9 16.3 237 182-434 41-335 (342)
123 3f66_A Hepatocyte growth facto 100.0 6.5E-36 2.2E-40 279.5 14.9 234 182-434 24-290 (298)
124 2yfx_A Tyrosine-protein kinase 100.0 3.8E-36 1.3E-40 284.9 13.5 239 179-434 26-303 (327)
125 3p1a_A MYT1 kinase, membrane-a 100.0 1.4E-35 4.8E-40 279.0 17.1 220 183-428 57-304 (311)
126 3pls_A Macrophage-stimulating 100.0 1E-35 3.6E-40 277.9 15.9 233 183-434 21-286 (298)
127 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.2E-36 1.8E-40 286.3 14.0 225 181-428 21-280 (353)
128 2pmi_A Negative RE, cyclin-dep 100.0 8.5E-36 2.9E-40 281.2 15.3 240 183-428 5-293 (317)
129 3dbq_A Dual specificity protei 100.0 1.3E-35 4.4E-40 283.2 16.6 228 181-428 7-273 (343)
130 2zmd_A Dual specificity protei 100.0 1E-35 3.5E-40 288.5 16.1 227 182-428 55-320 (390)
131 3a62_A Ribosomal protein S6 ki 100.0 1.9E-35 6.4E-40 280.1 17.5 225 181-428 15-276 (327)
132 3cok_A Serine/threonine-protei 100.0 1.1E-35 3.6E-40 275.2 15.4 225 182-428 10-262 (278)
133 3a8x_A Protein kinase C IOTA t 100.0 2.1E-35 7.3E-40 281.4 17.9 227 182-423 8-264 (345)
134 1xbb_A Tyrosine-protein kinase 100.0 7.6E-36 2.6E-40 278.1 14.2 234 179-434 12-278 (291)
135 3uzp_A CKI-delta, CKID, casein 100.0 2.5E-35 8.4E-40 275.2 17.7 237 182-434 8-279 (296)
136 1xjd_A Protein kinase C, theta 100.0 8.3E-36 2.8E-40 283.8 14.5 224 181-427 15-268 (345)
137 2a19_B Interferon-induced, dou 100.0 4.9E-36 1.7E-40 278.2 12.5 222 183-434 11-273 (284)
138 3g2f_A Bone morphogenetic prot 100.0 8.8E-36 3E-40 283.4 14.5 245 179-434 9-317 (336)
139 2y94_A 5'-AMP-activated protei 100.0 2.3E-35 7.7E-40 291.9 17.8 223 182-428 15-266 (476)
140 2a2a_A Death-associated protei 100.0 3E-35 1E-39 278.0 17.9 226 183-428 12-272 (321)
141 2j7t_A Serine/threonine-protei 100.0 1.4E-35 4.9E-40 277.6 15.5 230 180-428 16-275 (302)
142 2vd5_A DMPK protein; serine/th 100.0 4.3E-36 1.5E-40 292.1 12.2 233 179-428 57-327 (412)
143 3kk8_A Calcium/calmodulin depe 100.0 4.7E-35 1.6E-39 271.6 18.7 226 183-428 6-261 (284)
144 1byg_A CSK, protein (C-termina 100.0 6.6E-36 2.3E-40 276.6 12.9 231 178-434 16-272 (278)
145 1nxk_A MAP kinase-activated pr 100.0 3.5E-35 1.2E-39 285.6 18.5 227 183-428 61-321 (400)
146 2j0j_A Focal adhesion kinase 1 100.0 9.8E-36 3.4E-40 306.2 15.3 237 177-434 384-650 (656)
147 2jam_A Calcium/calmodulin-depe 100.0 5.1E-35 1.7E-39 274.3 18.9 225 183-428 9-261 (304)
148 1fvr_A Tyrosine-protein kinase 100.0 1.4E-35 4.8E-40 281.0 15.2 236 180-434 22-299 (327)
149 2jii_A Serine/threonine-protei 100.0 2.9E-36 1E-40 288.7 10.5 238 182-434 41-335 (352)
150 1rdq_E PKA C-alpha, CAMP-depen 100.0 5E-35 1.7E-39 279.3 18.8 222 181-428 39-293 (350)
151 3lzb_A Epidermal growth factor 100.0 2.1E-35 7.2E-40 279.7 16.0 232 182-434 14-277 (327)
152 4hgt_A Casein kinase I isoform 100.0 3.1E-35 1.1E-39 274.4 16.9 236 183-434 9-279 (296)
153 1vzo_A Ribosomal protein S6 ki 100.0 6.8E-36 2.3E-40 286.3 12.3 231 181-429 52-322 (355)
154 2w5a_A Serine/threonine-protei 100.0 5.7E-36 1.9E-40 277.1 11.2 232 182-431 5-270 (279)
155 4ejn_A RAC-alpha serine/threon 100.0 2.2E-35 7.6E-40 291.5 16.1 225 181-428 146-404 (446)
156 3bhy_A Death-associated protei 100.0 5.3E-35 1.8E-39 271.2 17.7 226 183-428 5-265 (283)
157 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.7E-35 9.2E-40 294.7 16.8 227 182-423 184-438 (543)
158 3mwu_A Calmodulin-domain prote 100.0 5.9E-35 2E-39 291.5 19.1 225 183-428 22-276 (486)
159 2i0e_A Protein kinase C-beta I 100.0 6.1E-35 2.1E-39 278.8 18.3 224 181-427 18-275 (353)
160 1t4h_A Serine/threonine-protei 100.0 1.3E-34 4.4E-39 269.6 20.1 225 181-428 24-282 (290)
161 3fdn_A Serine/threonine-protei 100.0 8.1E-35 2.8E-39 269.4 18.6 223 181-428 7-257 (279)
162 3lij_A Calcium/calmodulin depe 100.0 8E-35 2.7E-39 291.1 19.6 225 183-428 37-291 (494)
163 4agu_A Cyclin-dependent kinase 100.0 7.3E-36 2.5E-40 280.9 11.3 237 183-428 3-284 (311)
164 2qr7_A Ribosomal protein S6 ki 100.0 5.3E-36 1.8E-40 285.2 10.4 226 183-428 22-277 (342)
165 3eqc_A Dual specificity mitoge 100.0 3.4E-35 1.1E-39 282.2 15.8 175 181-362 31-232 (360)
166 2vwi_A Serine/threonine-protei 100.0 1.2E-35 4E-40 278.3 12.2 243 178-428 10-287 (303)
167 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.4E-36 2.2E-40 282.2 10.5 240 174-434 24-301 (319)
168 2clq_A Mitogen-activated prote 100.0 4E-35 1.4E-39 273.6 15.6 232 180-428 19-278 (295)
169 2r5t_A Serine/threonine-protei 100.0 6E-35 2.1E-39 280.7 16.9 222 182-426 37-287 (373)
170 3a7i_A MST3 kinase, serine/thr 100.0 9.3E-35 3.2E-39 272.3 17.7 226 180-428 19-270 (303)
171 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.6E-35 1.2E-39 278.4 15.0 238 181-428 32-318 (329)
172 2rku_A Serine/threonine-protei 100.0 7.7E-35 2.6E-39 271.7 17.0 225 181-428 13-265 (294)
173 3com_A Serine/threonine-protei 100.0 1.2E-34 4.2E-39 272.9 18.5 229 179-428 25-278 (314)
174 2ac3_A MAP kinase-interacting 100.0 5.4E-35 1.8E-39 275.6 16.1 236 183-428 12-295 (316)
175 3i6u_A CDS1, serine/threonine- 100.0 2.8E-35 9.5E-40 288.1 14.2 227 182-428 134-399 (419)
176 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-34 4.2E-39 290.5 19.1 226 182-428 35-301 (504)
177 3ll6_A Cyclin G-associated kin 100.0 4.1E-35 1.4E-39 278.7 14.9 235 178-434 23-307 (337)
178 3nyv_A Calmodulin-domain prote 100.0 4.9E-35 1.7E-39 292.1 16.0 225 183-428 26-281 (484)
179 2owb_A Serine/threonine-protei 100.0 6E-35 2E-39 277.6 15.8 225 181-428 39-291 (335)
180 2acx_A G protein-coupled recep 100.0 3.8E-35 1.3E-39 294.4 15.0 230 181-428 182-444 (576)
181 3g33_A Cell division protein k 100.0 2.7E-35 9.1E-40 276.7 13.1 238 182-428 8-296 (308)
182 2yex_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 271.0 13.7 227 183-428 7-261 (276)
183 3dls_A PAS domain-containing s 100.0 2.2E-35 7.6E-40 280.4 12.4 218 182-429 23-275 (335)
184 3an0_A Dual specificity mitoge 100.0 4.8E-35 1.6E-39 278.8 14.7 233 178-428 46-310 (340)
185 1x8b_A WEE1HU, WEE1-like prote 100.0 4E-35 1.4E-39 272.4 13.8 221 183-428 11-279 (289)
186 4aaa_A Cyclin-dependent kinase 100.0 2.3E-35 7.7E-40 280.1 12.3 241 179-428 21-306 (331)
187 2h6d_A 5'-AMP-activated protei 100.0 2.5E-34 8.5E-39 265.6 19.0 223 182-428 10-261 (276)
188 2eue_A Carbon catabolite derep 100.0 7.2E-35 2.4E-39 269.2 15.4 222 182-428 12-262 (275)
189 3fme_A Dual specificity mitoge 100.0 8.7E-35 3E-39 270.6 15.2 232 179-428 3-266 (290)
190 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.1E-34 7.3E-39 277.1 17.9 232 178-434 60-338 (365)
191 3byv_A Rhoptry kinase; malaria 100.0 2.3E-36 7.7E-41 292.1 4.1 223 178-428 68-359 (377)
192 2y7j_A Phosphorylase B kinase 100.0 1.8E-34 6.3E-39 277.3 17.1 226 183-428 94-359 (365)
193 3oz6_A Mitogen-activated prote 100.0 1E-34 3.5E-39 281.7 15.3 175 182-362 8-233 (388)
194 2vgo_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 266.1 18.0 223 181-428 12-262 (284)
195 3ttj_A Mitogen-activated prote 100.0 7.9E-35 2.7E-39 288.2 14.3 234 182-428 61-355 (464)
196 3mtl_A Cell division protein k 100.0 1.8E-35 6E-40 279.9 9.0 237 183-428 2-281 (324)
197 3eb0_A Putative uncharacterize 100.0 1E-34 3.5E-39 281.1 14.3 237 181-428 5-321 (383)
198 1ua2_A CAK, cell division prot 100.0 1E-34 3.5E-39 277.3 14.1 238 182-428 9-291 (346)
199 1u46_A ACK-1, activated CDC42 100.0 4E-35 1.4E-39 273.0 10.9 235 180-434 15-283 (291)
200 2r3i_A Cell division protein k 100.0 5.4E-34 1.9E-38 266.5 18.1 238 183-428 3-283 (299)
201 2x7f_A TRAF2 and NCK-interacti 100.0 2.1E-34 7.1E-39 272.8 15.4 235 174-428 15-286 (326)
202 2wei_A Calmodulin-domain prote 100.0 5.2E-34 1.8E-38 265.2 17.7 225 183-428 22-276 (287)
203 3nsz_A CK II alpha, casein kin 100.0 2E-34 6.8E-39 273.4 14.1 232 182-428 35-319 (330)
204 3sv0_A Casein kinase I-like; t 100.0 4.7E-34 1.6E-38 282.9 16.7 236 183-434 7-277 (483)
205 1j1b_A Glycogen synthase kinas 100.0 4.7E-34 1.6E-38 279.5 16.5 235 183-428 54-336 (420)
206 3llt_A Serine/threonine kinase 100.0 4.4E-34 1.5E-38 274.4 15.7 173 182-362 34-261 (360)
207 1phk_A Phosphorylase kinase; g 100.0 6.3E-34 2.2E-38 265.9 16.3 227 182-428 16-283 (298)
208 3mi9_A Cell division protein k 100.0 1.1E-33 3.9E-38 270.5 18.4 240 181-428 15-311 (351)
209 3lm5_A Serine/threonine-protei 100.0 3.2E-34 1.1E-38 271.7 14.3 227 184-428 29-287 (327)
210 2pml_X PFPK7, Ser/Thr protein 100.0 1.2E-34 4.2E-39 276.9 11.5 234 182-428 30-322 (348)
211 3n9x_A Phosphotransferase; mal 100.0 6.2E-34 2.1E-38 279.8 16.1 175 182-361 25-253 (432)
212 3cek_A Dual specificity protei 100.0 7.6E-34 2.6E-38 267.4 15.8 231 178-428 23-292 (313)
213 2ycf_A Serine/threonine-protei 100.0 1.1E-34 3.7E-39 274.3 9.9 226 183-428 10-274 (322)
214 2xrw_A Mitogen-activated prote 100.0 1E-33 3.5E-38 272.9 16.8 234 182-428 24-318 (371)
215 1cm8_A Phosphorylated MAP kina 100.0 3.3E-34 1.1E-38 275.7 13.3 232 182-428 24-307 (367)
216 3q60_A ROP5B; pseudokinase, tr 100.0 1.1E-34 3.8E-39 279.7 9.6 231 180-428 59-352 (371)
217 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-33 4.6E-38 291.1 18.0 224 181-427 339-596 (674)
218 2wtk_C Serine/threonine-protei 100.0 2.9E-33 9.9E-38 262.3 18.5 225 183-428 5-263 (305)
219 3rp9_A Mitogen-activated prote 100.0 3.3E-34 1.1E-38 284.1 12.3 169 183-356 53-280 (458)
220 3aln_A Dual specificity mitoge 100.0 6.9E-34 2.4E-38 269.4 13.9 237 177-428 16-285 (327)
221 1blx_A Cyclin-dependent kinase 100.0 8E-34 2.7E-38 268.7 14.1 238 182-428 10-296 (326)
222 3pg1_A Mitogen-activated prote 100.0 4E-34 1.4E-38 274.9 12.1 238 180-428 19-316 (362)
223 1zy4_A Serine/threonine-protei 100.0 1.2E-33 4E-38 264.4 14.9 226 183-428 6-283 (303)
224 2i6l_A Mitogen-activated prote 100.0 7.5E-34 2.6E-38 268.0 13.6 236 183-428 11-305 (320)
225 2rio_A Serine/threonine-protei 100.0 7.9E-34 2.7E-38 279.1 13.9 227 185-428 17-295 (434)
226 4e7w_A Glycogen synthase kinas 100.0 2.6E-34 8.9E-39 279.1 10.1 235 183-428 40-321 (394)
227 3rgf_A Cyclin-dependent kinase 100.0 4.7E-34 1.6E-38 278.6 11.6 242 184-428 21-333 (405)
228 2dyl_A Dual specificity mitoge 100.0 3E-33 1E-37 263.7 16.6 236 173-428 15-283 (318)
229 3qyz_A Mitogen-activated prote 100.0 1.9E-33 6.6E-38 270.3 15.3 236 183-428 27-313 (364)
230 3p23_A Serine/threonine-protei 100.0 1.8E-33 6E-38 276.0 15.3 228 179-428 20-283 (432)
231 3kvw_A DYRK2, dual specificity 100.0 2.7E-33 9.1E-38 274.8 16.3 174 182-363 96-302 (429)
232 3e3p_A Protein kinase, putativ 100.0 5.6E-34 1.9E-38 273.6 10.1 241 180-428 20-314 (360)
233 2fst_X Mitogen-activated prote 100.0 9E-34 3.1E-38 272.5 11.5 232 183-428 29-311 (367)
234 3fhr_A MAP kinase-activated pr 100.0 2.3E-33 7.8E-38 266.7 13.3 227 183-428 28-287 (336)
235 4exu_A Mitogen-activated prote 100.0 4.4E-33 1.5E-37 268.4 14.7 230 183-428 42-323 (371)
236 2b9h_A MAP kinase FUS3, mitoge 100.0 1.5E-33 5.1E-38 269.9 10.9 237 182-428 10-305 (353)
237 2vx3_A Dual specificity tyrosi 100.0 1.6E-32 5.5E-37 265.6 17.1 173 182-362 53-260 (382)
238 3qa8_A MGC80376 protein; kinas 100.0 1E-33 3.4E-38 286.9 8.5 249 182-433 13-307 (676)
239 1z57_A Dual specificity protei 100.0 1.1E-32 3.9E-37 261.9 15.1 235 182-428 13-328 (339)
240 3uqc_A Probable conserved tran 100.0 1.7E-32 5.7E-37 254.6 15.3 224 183-434 31-264 (286)
241 1q8y_A SR protein kinase; tran 100.0 7.1E-33 2.4E-37 267.2 13.1 239 182-428 18-333 (373)
242 3coi_A Mitogen-activated prote 100.0 7.8E-33 2.7E-37 265.0 12.9 230 183-428 24-305 (353)
243 1wak_A Serine/threonine-protei 100.0 1.2E-32 4.1E-37 267.7 14.4 239 182-428 36-391 (397)
244 2iwi_A Serine/threonine-protei 100.0 6.2E-33 2.1E-37 261.0 11.2 216 182-428 30-283 (312)
245 3a99_A Proto-oncogene serine/t 100.0 5.5E-33 1.9E-37 262.3 9.4 217 181-428 41-293 (320)
246 2eu9_A Dual specificity protei 100.0 6.6E-32 2.2E-36 258.4 15.3 235 182-428 18-333 (355)
247 2pzi_A Probable serine/threoni 100.0 1.2E-32 4.1E-37 285.6 10.9 215 183-433 80-326 (681)
248 3m2w_A MAP kinase-activated pr 100.0 3.9E-30 1.3E-34 240.4 12.8 227 183-428 17-256 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.3E-30 4.6E-35 254.4 8.2 221 179-427 74-362 (413)
250 2vuw_A Serine/threonine-protei 99.9 2.6E-28 9E-33 231.9 8.3 218 181-427 18-329 (336)
251 4azs_A Methyltransferase WBDD; 99.8 9.6E-23 3.3E-27 205.9 0.7 161 190-359 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.8 1.8E-21 6E-26 195.6 1.8 161 187-360 340-538 (540)
253 3rgz_A Protein brassinosteroid 99.8 5.3E-20 1.8E-24 193.4 12.8 128 2-129 503-700 (768)
254 3rgz_A Protein brassinosteroid 99.8 4.2E-20 1.4E-24 194.2 11.9 129 2-130 479-677 (768)
255 1ogq_A PGIP-2, polygalacturona 99.8 1.8E-19 6.3E-24 169.0 9.5 131 1-131 62-196 (313)
256 1ogq_A PGIP-2, polygalacturona 99.8 2.7E-19 9.4E-24 167.8 8.6 119 13-131 50-171 (313)
257 3oja_A Leucine-rich immune mol 99.8 3.6E-20 1.2E-24 184.3 -2.2 30 222-251 322-351 (487)
258 1w8a_A SLIT protein; signaling 99.7 6.8E-18 2.3E-22 146.5 12.3 122 3-126 21-143 (192)
259 4fcg_A Uncharacterized protein 99.7 5.2E-18 1.8E-22 160.1 11.1 124 4-129 141-273 (328)
260 2v70_A SLIT-2, SLIT homolog 2 99.7 1.1E-17 3.9E-22 148.4 12.5 124 4-129 25-149 (220)
261 3m19_A Variable lymphocyte rec 99.7 4E-17 1.4E-21 148.0 15.7 115 8-122 54-168 (251)
262 4eco_A Uncharacterized protein 99.7 2.4E-18 8.2E-23 176.9 6.5 98 29-127 198-322 (636)
263 4eco_A Uncharacterized protein 99.7 2.9E-18 1E-22 176.3 6.5 126 1-129 195-349 (636)
264 2v9t_B SLIT homolog 2 protein 99.7 7.6E-17 2.6E-21 143.0 14.3 122 4-127 25-146 (220)
265 2v9t_B SLIT homolog 2 protein 99.7 5.9E-17 2E-21 143.7 13.4 118 6-123 49-166 (220)
266 3e6j_A Variable lymphocyte rec 99.7 1.1E-16 3.6E-21 143.0 15.0 122 3-127 32-153 (229)
267 3e6j_A Variable lymphocyte rec 99.7 1.1E-16 3.6E-21 143.0 13.2 125 1-126 52-176 (229)
268 4fcg_A Uncharacterized protein 99.7 3E-17 1E-21 154.9 9.9 124 4-130 118-250 (328)
269 2v70_A SLIT-2, SLIT homolog 2 99.7 1.4E-16 4.6E-21 141.4 13.6 119 8-126 52-170 (220)
270 2o6s_A Variable lymphocyte rec 99.7 2E-16 6.8E-21 139.1 14.4 120 5-126 22-141 (208)
271 4ecn_A Leucine-rich repeat pro 99.7 7.8E-18 2.7E-22 177.0 6.2 98 29-127 440-565 (876)
272 3rfs_A Internalin B, repeat mo 99.7 1.8E-16 6.2E-21 145.5 14.4 122 7-128 79-200 (272)
273 3m19_A Variable lymphocyte rec 99.7 2.1E-16 7.3E-21 143.2 13.9 123 2-124 72-194 (251)
274 2wfh_A SLIT homolog 2 protein 99.7 2.2E-16 7.4E-21 137.0 13.1 118 4-124 24-141 (193)
275 2o6r_A Variable lymphocyte rec 99.7 3.7E-16 1.3E-20 133.7 12.7 121 4-126 21-141 (177)
276 3rfs_A Internalin B, repeat mo 99.7 6.3E-16 2.2E-20 141.8 15.1 120 7-128 57-176 (272)
277 4ecn_A Leucine-rich repeat pro 99.7 2.4E-17 8.1E-22 173.3 6.3 122 2-126 438-589 (876)
278 1ozn_A Reticulon 4 receptor; N 99.7 9E-16 3.1E-20 141.7 14.9 122 6-127 49-171 (285)
279 3v47_A TOLL-like receptor 5B a 99.7 3.5E-16 1.2E-20 154.4 12.1 111 13-123 275-385 (455)
280 1ozn_A Reticulon 4 receptor; N 99.6 2.3E-15 7.8E-20 139.1 15.9 123 5-129 26-149 (285)
281 2o6s_A Variable lymphocyte rec 99.6 2.4E-15 8.1E-20 132.2 15.3 121 6-126 45-165 (208)
282 2o6q_A Variable lymphocyte rec 99.6 3.3E-15 1.1E-19 136.8 16.7 111 13-123 37-147 (270)
283 2ell_A Acidic leucine-rich nuc 99.6 3.4E-16 1.2E-20 132.7 8.6 110 12-124 23-135 (168)
284 2je0_A Acidic leucine-rich nuc 99.6 2.1E-16 7.3E-21 131.1 6.9 114 11-126 15-130 (149)
285 1p9a_G Platelet glycoprotein I 99.6 2.3E-15 7.9E-20 139.3 14.5 106 14-122 32-137 (290)
286 3vq2_A TLR4, TOLL-like recepto 99.6 1.4E-15 4.9E-20 155.6 14.0 127 3-129 46-173 (606)
287 2z62_A TOLL-like receptor 4, v 99.6 1.7E-15 5.8E-20 139.2 12.9 123 5-129 22-145 (276)
288 2je0_A Acidic leucine-rich nuc 99.6 5.1E-16 1.8E-20 128.8 8.0 114 3-118 32-149 (149)
289 4b8c_D Glucose-repressible alc 99.6 2.7E-16 9.2E-21 163.5 7.7 121 5-129 216-336 (727)
290 4g8a_A TOLL-like receptor 4; l 99.6 1.3E-15 4.4E-20 156.5 12.3 119 8-126 71-190 (635)
291 2z66_A Variable lymphocyte rec 99.6 1.9E-15 6.6E-20 141.0 12.2 121 5-125 93-215 (306)
292 3g39_A Variable lymphocyte rec 99.6 2.8E-15 9.6E-20 127.2 11.8 110 14-126 10-119 (170)
293 2z66_A Variable lymphocyte rec 99.6 2E-15 6.8E-20 140.9 11.9 124 7-130 120-244 (306)
294 2o6q_A Variable lymphocyte rec 99.6 6.2E-15 2.1E-19 135.0 14.6 122 6-127 54-175 (270)
295 3v47_A TOLL-like receptor 5B a 99.6 1.9E-15 6.6E-20 149.0 11.1 114 13-126 30-146 (455)
296 4g8a_A TOLL-like receptor 4; l 99.6 2.5E-15 8.4E-20 154.4 12.2 124 4-129 45-169 (635)
297 1w8a_A SLIT protein; signaling 99.6 6.4E-15 2.2E-19 127.7 12.4 113 15-130 10-123 (192)
298 2z62_A TOLL-like receptor 4, v 99.6 7E-15 2.4E-19 135.1 13.3 124 6-129 45-169 (276)
299 2xot_A Amphoterin-induced prot 99.6 2.8E-15 9.6E-20 143.3 11.0 117 5-123 33-150 (361)
300 1p9a_G Platelet glycoprotein I 99.6 9.3E-15 3.2E-19 135.2 13.7 119 10-130 74-192 (290)
301 3oja_B Anopheles plasmodium-re 99.6 1.2E-14 4.1E-19 148.4 15.8 119 5-123 66-185 (597)
302 2r9u_A Variable lymphocyte rec 99.6 8.5E-15 2.9E-19 124.7 12.3 107 15-124 14-120 (174)
303 3vq2_A TLR4, TOLL-like recepto 99.6 3.4E-15 1.2E-19 152.8 10.8 125 5-129 391-517 (606)
304 2id5_A Lingo-1, leucine rich r 99.6 7.3E-15 2.5E-19 145.9 12.7 121 5-127 26-146 (477)
305 4ezg_A Putative uncharacterize 99.6 3.7E-15 1.3E-19 129.8 9.1 116 4-123 58-173 (197)
306 1zar_A RIO2 kinase; serine kin 99.6 2.4E-16 8.1E-21 145.2 1.5 104 183-301 90-211 (282)
307 2ell_A Acidic leucine-rich nuc 99.6 3E-15 1E-19 126.8 7.9 118 3-122 39-160 (168)
308 2z81_A CD282 antigen, TOLL-lik 99.6 2.9E-15 1E-19 151.4 8.9 120 5-126 20-140 (549)
309 2xot_A Amphoterin-induced prot 99.6 1.1E-14 3.6E-19 139.3 12.1 118 6-124 56-178 (361)
310 1wwl_A Monocyte differentiatio 99.6 1.4E-15 4.7E-20 142.5 5.6 111 11-122 93-214 (312)
311 1dce_A Protein (RAB geranylger 99.6 6.4E-15 2.2E-19 148.6 10.8 108 14-126 442-550 (567)
312 4b8c_D Glucose-repressible alc 99.6 7.2E-16 2.5E-20 160.3 3.8 125 4-131 238-363 (727)
313 3j0a_A TOLL-like receptor 5; m 99.6 9.3E-15 3.2E-19 155.1 12.0 127 3-129 38-168 (844)
314 2z63_A TOLL-like receptor 4, v 99.6 1E-14 3.5E-19 148.0 11.9 124 5-128 388-513 (570)
315 3oja_B Anopheles plasmodium-re 99.6 9.7E-15 3.3E-19 149.0 11.7 114 13-126 51-164 (597)
316 2id5_A Lingo-1, leucine rich r 99.6 2.9E-14 9.9E-19 141.5 14.7 123 2-124 45-167 (477)
317 2z63_A TOLL-like receptor 4, v 99.6 1.7E-14 5.9E-19 146.3 12.9 123 5-127 44-167 (570)
318 2z7x_B TOLL-like receptor 1, v 99.6 1.6E-14 5.5E-19 145.0 12.5 110 11-122 322-434 (520)
319 4ezg_A Putative uncharacterize 99.6 8.5E-15 2.9E-19 127.4 9.1 115 8-126 39-153 (197)
320 1wwl_A Monocyte differentiatio 99.5 2.1E-15 7.3E-20 141.2 5.3 125 1-126 107-245 (312)
321 3t6q_A CD180 antigen; protein- 99.5 1.3E-14 4.6E-19 148.3 11.6 121 6-126 50-170 (606)
322 2wfh_A SLIT homolog 2 protein 99.5 5.2E-14 1.8E-18 122.0 13.5 108 15-126 12-119 (193)
323 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 2.7E-14 9.3E-19 144.7 13.5 116 10-128 350-468 (562)
324 2z81_A CD282 antigen, TOLL-lik 99.5 1.3E-14 4.5E-19 146.5 10.3 130 2-131 39-170 (549)
325 3zyi_A Leucine-rich repeat-con 99.5 6E-14 2E-18 138.3 14.7 121 5-127 69-189 (452)
326 1ziw_A TOLL-like receptor 3; i 99.5 1.5E-14 5.1E-19 150.1 10.7 121 7-127 43-163 (680)
327 3o6n_A APL1; leucine-rich repe 99.5 1.4E-13 4.7E-18 133.0 16.1 119 5-123 60-179 (390)
328 3o6n_A APL1; leucine-rich repe 99.5 3.2E-14 1.1E-18 137.4 11.5 117 11-129 43-161 (390)
329 3t6q_A CD180 antigen; protein- 99.5 3.6E-14 1.2E-18 145.1 12.3 124 6-129 369-496 (606)
330 2z80_A TOLL-like receptor 2, v 99.5 1.7E-14 5.7E-19 137.5 8.9 121 4-127 45-168 (353)
331 4glp_A Monocyte differentiatio 99.5 1.2E-14 4.2E-19 135.8 7.9 128 1-129 103-244 (310)
332 3oja_A Leucine-rich immune mol 99.5 6.8E-15 2.3E-19 146.2 6.2 115 11-129 118-233 (487)
333 1ziw_A TOLL-like receptor 3; i 99.5 4.7E-14 1.6E-18 146.3 12.7 124 4-129 18-141 (680)
334 1xku_A Decorin; proteoglycan, 99.5 5.3E-14 1.8E-18 132.7 12.0 116 8-127 140-257 (330)
335 2z7x_B TOLL-like receptor 1, v 99.5 3E-14 1E-18 143.0 10.5 124 1-128 336-462 (520)
336 3j0a_A TOLL-like receptor 5; m 99.5 2.6E-14 8.8E-19 151.7 10.4 126 3-128 62-193 (844)
337 2r9u_A Variable lymphocyte rec 99.5 9.1E-14 3.1E-18 118.3 11.6 98 3-103 25-122 (174)
338 1dce_A Protein (RAB geranylger 99.5 2.9E-14 9.9E-19 143.9 9.7 108 5-116 456-567 (567)
339 4glp_A Monocyte differentiatio 99.5 1E-14 3.5E-19 136.3 5.9 111 12-122 90-210 (310)
340 2z80_A TOLL-like receptor 2, v 99.5 9.6E-14 3.3E-18 132.2 12.7 121 7-129 70-194 (353)
341 2xwt_C Thyrotropin receptor; s 99.5 2.5E-14 8.4E-19 128.5 8.1 108 14-123 32-145 (239)
342 3zyi_A Leucine-rich repeat-con 99.5 8.2E-14 2.8E-18 137.3 12.4 122 2-123 88-210 (452)
343 3g39_A Variable lymphocyte rec 99.5 1.2E-13 4.2E-18 117.0 11.7 96 4-101 23-118 (170)
344 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 7.5E-14 2.6E-18 141.5 12.1 124 1-128 365-491 (562)
345 2ft3_A Biglycan; proteoglycan, 99.5 2.6E-13 8.9E-18 128.1 15.0 114 4-122 47-160 (332)
346 2o6r_A Variable lymphocyte rec 99.5 3.3E-13 1.1E-17 115.1 13.7 109 14-125 8-116 (177)
347 2ft3_A Biglycan; proteoglycan, 99.5 2.6E-13 8.8E-18 128.1 14.3 121 5-128 70-212 (332)
348 3zyj_A Leucine-rich repeat-con 99.5 1.3E-13 4.6E-18 135.3 12.2 120 5-126 58-177 (440)
349 2xwt_C Thyrotropin receptor; s 99.5 7.3E-14 2.5E-18 125.4 8.8 120 6-128 48-174 (239)
350 1a9n_A U2A', U2A'; complex (nu 99.5 7.3E-14 2.5E-18 119.2 8.2 114 8-127 14-130 (176)
351 3zyj_A Leucine-rich repeat-con 99.5 1.8E-13 6.2E-18 134.3 11.9 123 3-126 78-201 (440)
352 1ds9_A Outer arm dynein; leuci 99.5 2.2E-16 7.5E-21 137.7 -8.4 122 1-127 30-158 (198)
353 1a9n_A U2A', U2A'; complex (nu 99.5 6.5E-14 2.2E-18 119.5 6.7 112 5-122 34-153 (176)
354 1xku_A Decorin; proteoglycan, 99.5 3.2E-13 1.1E-17 127.3 12.1 113 5-122 46-158 (330)
355 2ifg_A High affinity nerve gro 99.4 2.6E-13 9E-18 128.8 10.2 105 16-123 11-117 (347)
356 3o53_A Protein LRIM1, AGAP0063 99.4 7.9E-14 2.7E-18 130.7 6.1 113 12-128 119-232 (317)
357 1h6u_A Internalin H; cell adhe 99.4 1E-12 3.6E-17 122.5 13.3 108 8-123 58-165 (308)
358 3cvr_A Invasion plasmid antige 99.4 2.9E-13 9.8E-18 136.1 9.2 105 12-129 139-250 (571)
359 1h6t_A Internalin B; cell adhe 99.4 8.1E-13 2.8E-17 122.2 10.8 111 8-126 63-173 (291)
360 1m9s_A Internalin B; cell inva 99.4 1.1E-12 3.9E-17 133.1 12.7 111 8-126 60-170 (605)
361 2ifg_A High affinity nerve gro 99.4 7E-13 2.4E-17 125.9 10.4 94 4-99 23-117 (347)
362 1xeu_A Internalin C; cellular 99.4 1.3E-12 4.4E-17 119.0 11.7 105 9-122 37-141 (263)
363 3o53_A Protein LRIM1, AGAP0063 99.4 3.3E-13 1.1E-17 126.5 7.2 113 12-129 33-164 (317)
364 1h6t_A Internalin B; cell adhe 99.4 1E-12 3.6E-17 121.5 10.4 107 9-123 42-148 (291)
365 1jl5_A Outer protein YOPM; leu 99.4 3.3E-13 1.1E-17 132.8 7.0 117 3-127 24-170 (454)
366 1h6u_A Internalin H; cell adhe 99.4 1.6E-12 5.4E-17 121.3 10.8 111 5-124 78-188 (308)
367 1m9s_A Internalin B; cell inva 99.4 1.6E-12 5.4E-17 132.0 11.3 110 5-123 80-189 (605)
368 3cvr_A Invasion plasmid antige 99.4 3.1E-12 1.1E-16 128.5 12.7 101 5-123 74-174 (571)
369 1xeu_A Internalin C; cellular 99.4 2.2E-12 7.4E-17 117.5 10.3 111 4-124 55-165 (263)
370 4fmz_A Internalin; leucine ric 99.3 1.9E-12 6.4E-17 122.8 8.9 112 9-126 217-328 (347)
371 3bz5_A Internalin-J, INLJ; leu 99.3 3.2E-12 1.1E-16 125.8 10.2 107 6-123 35-141 (457)
372 1o6v_A Internalin A; bacterial 99.3 5E-12 1.7E-16 125.0 10.6 108 8-123 238-345 (466)
373 1o6v_A Internalin A; bacterial 99.3 9.7E-12 3.3E-16 122.9 12.5 110 9-126 217-326 (466)
374 4fmz_A Internalin; leucine ric 99.3 4.3E-12 1.5E-16 120.4 9.4 113 9-129 195-307 (347)
375 3bz5_A Internalin-J, INLJ; leu 99.3 1.7E-11 6E-16 120.6 12.5 107 9-126 144-250 (457)
376 1jl5_A Outer protein YOPM; leu 99.3 2.2E-11 7.4E-16 119.8 12.6 101 13-126 131-231 (454)
377 2ca6_A RAN GTPase-activating p 99.3 1.9E-13 6.3E-18 131.9 -2.9 118 5-122 52-200 (386)
378 2ast_B S-phase kinase-associat 99.3 1.6E-13 5.4E-18 129.7 -3.8 115 6-120 86-206 (336)
379 2ca6_A RAN GTPase-activating p 99.2 3.6E-13 1.2E-17 129.9 -1.8 111 13-123 159-288 (386)
380 3g06_A SSPH2 (leucine-rich rep 99.2 2E-11 7E-16 124.1 10.5 81 38-127 222-302 (622)
381 1ds9_A Outer arm dynein; leuci 99.2 6.2E-14 2.1E-18 122.1 -7.4 110 9-123 14-129 (198)
382 3goz_A Leucine-rich repeat-con 99.2 7.6E-13 2.6E-17 126.4 -1.2 124 1-124 10-153 (362)
383 2ast_B S-phase kinase-associat 99.2 1E-12 3.5E-17 124.0 -0.6 114 9-123 64-183 (336)
384 1zth_A RIO1 serine protein kin 99.2 8E-12 2.8E-16 113.3 5.2 105 185-300 49-187 (258)
385 4ay9_X Follicle-stimulating ho 99.2 4.3E-11 1.5E-15 113.7 8.1 113 5-119 24-138 (350)
386 3g06_A SSPH2 (leucine-rich rep 99.1 3.9E-10 1.4E-14 114.6 13.6 102 4-123 54-155 (622)
387 3goz_A Leucine-rich repeat-con 99.1 5.7E-12 1.9E-16 120.3 -2.7 121 7-127 44-185 (362)
388 4ay9_X Follicle-stimulating ho 99.0 9.6E-10 3.3E-14 104.3 7.8 114 8-122 74-215 (350)
389 1z7x_W Ribonuclease inhibitor; 98.9 1.1E-11 3.6E-16 122.4 -6.3 113 11-123 254-384 (461)
390 1z7x_W Ribonuclease inhibitor; 98.9 5.1E-11 1.8E-15 117.4 -4.5 123 5-127 219-359 (461)
391 3rw6_A Nuclear RNA export fact 98.8 6.4E-10 2.2E-14 100.2 -0.4 80 34-115 167-257 (267)
392 4gyi_A RIO2 kinase; protein ki 98.8 6.1E-10 2.1E-14 105.5 -0.7 106 184-301 96-223 (397)
393 3un9_A NLR family member X1; l 98.7 7.6E-10 2.6E-14 105.7 -2.4 111 13-123 101-225 (372)
394 3rw6_A Nuclear RNA export fact 98.6 1.8E-08 6E-13 90.8 4.0 80 10-91 167-257 (267)
395 1io0_A Tropomodulin; LRR prote 98.6 4.2E-09 1.4E-13 90.2 -0.5 114 9-122 32-164 (185)
396 3un9_A NLR family member X1; l 98.5 3.6E-09 1.2E-13 101.0 -3.3 112 12-123 71-197 (372)
397 3ogk_B Coronatine-insensitive 98.5 1.8E-09 6.3E-14 109.7 -5.6 114 10-123 375-502 (592)
398 3sb4_A Hypothetical leucine ri 98.5 6.5E-07 2.2E-11 83.9 12.1 58 60-118 225-283 (329)
399 3sb4_A Hypothetical leucine ri 98.5 3.4E-07 1.2E-11 85.8 9.0 102 12-115 225-327 (329)
400 3ogk_B Coronatine-insensitive 98.5 2E-08 7E-13 102.0 -0.1 81 11-92 162-250 (592)
401 3tm0_A Aminoglycoside 3'-phosp 98.3 7.5E-07 2.6E-11 80.5 6.9 109 183-301 14-123 (263)
402 2ra8_A Uncharacterized protein 98.1 4.2E-07 1.4E-11 86.0 -0.1 117 5-124 164-294 (362)
403 2p1m_B Transport inhibitor res 98.1 1.3E-07 4.4E-12 96.1 -4.0 112 11-123 370-495 (594)
404 3d1u_A Putative fructosamine-3 98.0 7E-06 2.4E-10 75.2 7.2 99 186-306 18-123 (288)
405 2p1m_B Transport inhibitor res 98.0 5.2E-07 1.8E-11 91.6 -1.3 109 11-119 103-221 (594)
406 1io0_A Tropomodulin; LRR prote 98.0 7E-07 2.4E-11 76.2 -0.9 91 8-98 60-164 (185)
407 2ra8_A Uncharacterized protein 97.9 2.4E-06 8.3E-11 80.8 2.2 116 6-124 132-267 (362)
408 1nd4_A Aminoglycoside 3'-phosp 97.8 1.4E-05 4.8E-10 71.7 5.1 103 184-301 21-125 (264)
409 4fdw_A Leucine rich hypothetic 97.8 0.00011 3.8E-09 70.5 10.8 78 14-94 158-235 (401)
410 4fdw_A Leucine rich hypothetic 97.7 0.00015 5E-09 69.7 9.7 109 9-122 245-358 (401)
411 3e4g_A ATP synthase subunit S, 97.5 1.2E-05 4.2E-10 67.1 0.0 83 37-119 61-149 (176)
412 3dxp_A Putative acyl-COA dehyd 97.5 7.3E-05 2.5E-09 70.7 5.4 108 187-301 42-157 (359)
413 3e4g_A ATP synthase subunit S, 97.3 3.8E-05 1.3E-09 64.1 -0.0 92 5-96 53-150 (176)
414 1pgv_A TMD-1, tropomodulin TMD 97.2 5.6E-05 1.9E-09 64.3 0.0 113 10-122 38-170 (197)
415 3rfe_A Platelet glycoprotein I 97.0 0.0014 4.8E-08 51.9 6.9 36 62-97 32-67 (130)
416 3rfe_A Platelet glycoprotein I 96.9 0.0019 6.6E-08 51.0 6.8 55 17-73 12-67 (130)
417 4gt6_A Cell surface protein; l 96.8 0.0078 2.7E-07 57.4 11.1 107 9-120 261-368 (394)
418 3r70_A Aminoglycoside phosphot 96.8 0.0018 6.2E-08 59.9 6.3 102 184-301 38-143 (320)
419 4h09_A Hypothetical leucine ri 96.5 0.014 4.6E-07 55.3 10.6 108 9-119 213-320 (379)
420 3tdw_A Gentamicin resistance p 96.4 0.0076 2.6E-07 55.3 8.2 102 188-301 24-129 (306)
421 3jr1_A Putative fructosamine-3 96.4 0.0056 1.9E-07 56.3 6.6 94 186-301 39-135 (312)
422 4gt6_A Cell surface protein; l 96.3 0.011 3.7E-07 56.4 8.4 108 8-121 283-390 (394)
423 3f7w_A Putative fructosamine-3 96.2 0.0096 3.3E-07 54.0 7.3 78 184-265 16-96 (288)
424 4gkh_A Aminoglycoside 3'-phosp 96.1 0.016 5.5E-07 51.8 8.2 101 190-301 31-134 (272)
425 3sg8_A APH(2'')-ID; antibiotic 96.0 0.0044 1.5E-07 56.8 3.9 102 188-301 25-132 (304)
426 4fs7_A Uncharacterized protein 95.8 0.017 5.7E-07 55.0 7.1 106 8-119 271-376 (394)
427 4fs7_A Uncharacterized protein 95.6 0.04 1.4E-06 52.4 9.3 106 8-119 248-353 (394)
428 3ats_A Putative uncharacterize 95.4 0.006 2E-07 57.3 2.5 115 187-301 24-157 (357)
429 3ovc_A Hygromycin-B 4-O-kinase 95.3 0.016 5.4E-07 54.6 5.1 99 186-301 44-145 (362)
430 1pgv_A TMD-1, tropomodulin TMD 95.2 0.0029 9.9E-08 53.7 -0.5 89 9-97 66-169 (197)
431 4h09_A Hypothetical leucine ri 95.0 0.14 4.7E-06 48.2 10.6 85 32-119 212-296 (379)
432 2olc_A MTR kinase, methylthior 94.4 0.043 1.5E-06 52.2 5.4 75 188-264 35-120 (397)
433 2yle_A Protein spire homolog 1 92.2 0.62 2.1E-05 39.8 8.4 92 265-360 34-136 (229)
434 3cxl_A N-chimerin; SH2, RHO-GA 91.7 0.017 5.8E-07 56.3 -2.0 62 186-250 145-215 (463)
435 2pyw_A Uncharacterized protein 84.6 1.7 5.8E-05 41.4 6.8 80 188-270 39-130 (420)
436 2q83_A YTAA protein; 2635576, 84.5 1 3.6E-05 41.1 5.2 73 189-266 38-118 (346)
437 1nw1_A Choline kinase (49.2 KD 83.9 0.62 2.1E-05 44.7 3.3 96 188-301 78-182 (429)
438 3feg_A Choline/ethanolamine ki 81.3 0.89 3.1E-05 42.7 3.3 96 189-301 56-160 (379)
439 2qg7_A Ethanolamine kinase PV0 75.3 2 6.7E-05 41.5 3.8 97 188-301 113-211 (458)
440 3csv_A Aminoglycoside phosphot 75.0 7.5 0.00026 35.3 7.6 99 190-301 25-126 (333)
441 1zyl_A Hypothetical protein YI 74.9 6.1 0.00021 35.8 6.9 74 190-265 33-113 (328)
442 3mes_A Choline kinase; malaria 59.1 5.4 0.00018 38.0 3.0 97 188-301 75-180 (424)
443 2ppq_A HSK, HK, homoserine kin 57.8 7.5 0.00026 35.0 3.7 75 188-265 27-109 (322)
444 3dxq_A Choline/ethanolamine ki 56.5 6.6 0.00022 35.1 3.1 71 188-266 23-95 (301)
445 3c5i_A Choline kinase; choline 50.7 13 0.00045 34.3 4.2 73 188-265 38-120 (369)
446 3i1a_A Spectinomycin phosphotr 40.3 58 0.002 29.5 6.8 68 192-266 32-108 (339)
447 3f2s_A CK, chetk-alpha, cholin 36.5 17 0.00057 34.2 2.5 74 189-266 58-158 (401)
448 2lz0_A Uncharacterized protein 21.0 2.3E+02 0.0079 20.2 6.4 36 57-93 16-51 (100)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.6e-52 Score=386.75 Aligned_cols=239 Identities=26% Similarity=0.428 Sum_probs=190.6
Q ss_pred cccccCcceeeeecccCcceEEEEEcC------CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLP------DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
.+++.+|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++
T Consensus 9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 456678999999999999999999864 46789999998766666788999999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHHhhC---------CCCCCCCHHHHHHHHHHhhhccceeec----------------------
Q 040641 253 EKLLVYEYMVNGSLDLWLRNAT---------GSHEVLDRAKRYKIACSSARGLAFLHQ---------------------- 301 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------- 301 (435)
..+||||||++|+|.++|+... .....++|.+++.++.|+|+||+|||+
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEE
Confidence 9999999999999999997642 223469999999999999999999996
Q ss_pred --cccccccccccCcc-ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHH
Q 040641 302 --DFGLARLISACETH-VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVF 377 (435)
Q Consensus 302 --DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~ 377 (435)
|||+|+........ ......||+.|||||++.+..|+.|+|||||||++|||+| |+.||.... ...+..
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~----~~~~~~--- 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS----NNEVIE--- 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC----HHHHHH---
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC----HHHHHH---
Confidence 99999976543322 2334579999999999999999999999999999999999 899985421 112222
Q ss_pred HHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 378 QKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.+....... .| . .+..++.+++.+||+.||++||||.||++.|+++.
T Consensus 242 -~i~~~~~~~--~p---~----~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 242 -CITQGRVLQ--RP---R----TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp -HHHHTCCCC--CC---T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHcCCCCC--CC---c----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 222221111 11 1 12235778999999999999999999999998763
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.4e-52 Score=389.50 Aligned_cols=238 Identities=28% Similarity=0.426 Sum_probs=183.7
Q ss_pred ccccCcceeeeecccCcceEEEEEcC------CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP------DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE 253 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 253 (435)
....++.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++.
T Consensus 38 i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred cCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 45568899999999999999999864 477899999987666667889999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHHhhCC-----------CCCCCCHHHHHHHHHHhhhccceeec---------------------
Q 040641 254 KLLVYEYMVNGSLDLWLRNATG-----------SHEVLDRAKRYKIACSSARGLAFLHQ--------------------- 301 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------- 301 (435)
.+||||||++|+|.++++.... ....++|.+++.|+.|+|+||+|||+
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcE
Confidence 9999999999999999986432 12458999999999999999999996
Q ss_pred ---cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHH
Q 040641 302 ---DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWV 376 (435)
Q Consensus 302 ---DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~ 376 (435)
|||+|+.+..... ...+..+||+.|||||++.+..|+.++|||||||++|||+| |+.||.... ...+...
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~----~~~~~~~- 272 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS----NTEAIDC- 272 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC----HHHHHHH-
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC----HHHHHHH-
Confidence 9999997654332 23345789999999999999999999999999999999999 899985421 1122222
Q ss_pred HHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 377 FQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
+..... ...|. .+..++.+++.+||+.||++||||.||++.|+.+.
T Consensus 273 ---i~~g~~--~~~p~-------~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 273 ---ITQGRE--LERPR-------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp ---HHHTCC--CCCCT-------TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---HHcCCC--CCCcc-------cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 222111 01111 12235778999999999999999999999999874
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.9e-52 Score=385.75 Aligned_cols=239 Identities=21% Similarity=0.340 Sum_probs=189.2
Q ss_pred cccccCcceeeeecccCcceEEEEEcC------CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeC
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLP------DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFD 251 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 251 (435)
+.+...+.+.+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+.+|++++|||||+++|+|..+
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~ 101 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 101 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC
Confidence 345567888999999999999999863 467899999975433 3457899999999999999999999999999
Q ss_pred CeeEEEEecccCCCHHHHHHhhCC------------CCCCCCHHHHHHHHHHhhhccceeec------------------
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATG------------SHEVLDRAKRYKIACSSARGLAFLHQ------------------ 301 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gl~yLH~------------------ 301 (435)
+..+||||||++|+|.++|+.... ....++|..++.|+.|+|+||+|||+
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK 181 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCC
Confidence 999999999999999999975421 12458999999999999999999996
Q ss_pred ------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHH
Q 040641 302 ------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLV 373 (435)
Q Consensus 302 ------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~ 373 (435)
|||+|+.+..... ...+..+||+.|||||++.+..|+.++|||||||++|||+| |+.||.... ..++.
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~----~~~~~ 257 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS----NQDVV 257 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC----HHHHH
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC----HHHHH
Confidence 9999997654332 23445789999999999999999999999999999999999 788885321 11222
Q ss_pred HHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 374 GWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+....... .. ..+...+.+++.+||+.||++||||.||++.|+++.
T Consensus 258 ----~~i~~~~~~~-----~p----~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 258 ----EMIRNRQVLP-----CP----DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp ----HHHHTTCCCC-----CC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----HHHHcCCCCC-----Cc----ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2222221111 11 112245778999999999999999999999998753
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-50 Score=374.60 Aligned_cols=240 Identities=25% Similarity=0.397 Sum_probs=182.1
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
.|+.+..++++.+.||+|+||+||+|++.+ .||||.++... .+..+.|.+|+++|++++|||||+++|+|.. +..
T Consensus 30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~ 106 (307)
T 3omv_A 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNL 106 (307)
T ss_dssp CCBCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSC
T ss_pred CcEEcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeE
Confidence 577888999999999999999999999753 69999986433 3345789999999999999999999999864 678
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
+||||||++|+|.++|+... ..++|..++.|+.|+|+||+|||+ |||+|+...
T Consensus 107 ~iVmEy~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEEEECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred EEEEEcCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 99999999999999997543 358999999999999999999996 999998765
Q ss_pred ccC-ccccccccccCCCcCCcCCC---CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 311 ACE-THVSTDIAGTLGYIPPEYGQ---SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 311 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
... .......+||+.|||||++. ...|+.|+|||||||++|||+||+.||..... ... +...+....
T Consensus 184 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~----~~~---~~~~~~~~~-- 254 (307)
T 3omv_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN----RDQ---IIFMVGRGY-- 254 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHH---HHHHHHTTC--
T ss_pred cCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh----HHH---HHHHHhcCC--
Confidence 322 23344578999999999874 34689999999999999999999999853211 111 122222111
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..|... .....+...+.+++.+||+.||++||||.||++.|+.+.
T Consensus 255 --~~p~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 255 --ASPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp --CCCCST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred --CCCCcc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 111110 011122345778999999999999999999999988763
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.9e-49 Score=376.51 Aligned_cols=246 Identities=28% Similarity=0.408 Sum_probs=192.8
Q ss_pred cccccccccccCcceeeeecccCcceEEEEEcCC------CCEEEEEEcccccc-ccHHHHHHHHHHhccCCC-CCceeE
Q 040641 173 INISMFQQPLLKLTLVDILEDGGFGTVYKATLPD------GKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKH-QNLVLL 244 (435)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H-~niv~l 244 (435)
.+...|+++..+|++.+.||+|+||+||+|++.. ++.||||+++.... ...++|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3445688899999999999999999999998532 36899999975443 345679999999999965 899999
Q ss_pred EEEEEeC-CeeEEEEecccCCCHHHHHHhhCC------------CCCCCCHHHHHHHHHHhhhccceeec----------
Q 040641 245 LGYCSFD-EEKLLVYEYMVNGSLDLWLRNATG------------SHEVLDRAKRYKIACSSARGLAFLHQ---------- 301 (435)
Q Consensus 245 ~g~~~~~-~~~~lv~ey~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gl~yLH~---------- 301 (435)
+|+|... +..+||||||++|+|.++|+.... ....+++..++.++.|||+||+|||+
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~ 213 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 213 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCc
Confidence 9999764 568999999999999999986431 12458999999999999999999996
Q ss_pred --------------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc
Q 040641 302 --------------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQ 365 (435)
Q Consensus 302 --------------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~ 365 (435)
|||+|+.+..... ...+..+||+.|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 9999997754433 23445789999999999999999999999999999999998 8999854221
Q ss_pred cccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 366 EKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.. .+...+....... .| .. +..++.+++.+||+.||++||||.||++.|++++
T Consensus 294 ----~~---~~~~~i~~g~~~~--~p---~~----~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 294 ----DE---EFCRRLKEGTRMR--AP---DY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp ----SH---HHHHHHHHTCCCC--CC---TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----HH---HHHHHHHcCCCCC--CC---cc----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11 1222222221111 11 11 1235778999999999999999999999999875
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.5e-48 Score=361.46 Aligned_cols=241 Identities=27% Similarity=0.340 Sum_probs=177.2
Q ss_pred cCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCC----eeEEEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE----EKLLVY 258 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lv~ 258 (435)
+++.+.+.||+|+||+||+|++ +|+.||||+++..... ...+..|+..+.+++|||||+++|+|..++ ..+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4678899999999999999998 5899999999653321 223445677778899999999999998754 579999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------------ccccc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------------------DFGLA 306 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------------DfGla 306 (435)
|||++|+|.++|+.. .++|..+.+++.|+|+||+|||+ |||+|
T Consensus 81 Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 999999999999753 38999999999999999999982 99999
Q ss_pred ccccccCcc---ccccccccCCCcCCcCCCCC------CCCCcccchhHHHHHHHHHhCCCCCCCCccccc-------CC
Q 040641 307 RLISACETH---VSTDIAGTLGYIPPEYGQSR------MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKE-------GA 370 (435)
Q Consensus 307 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~-------~~ 370 (435)
+........ .....+||+.|||||++.+. .++.|+|||||||++|||+||++|+........ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 876543322 22346899999999987654 467899999999999999999887643211100 00
Q ss_pred cHHHHHHHHhccCCCCccccccccC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 371 NLVGWVFQKMKKQQADDVLDPTVLN-AGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.....+...+... ..+|.... ....+....+.+++.+||+.||++||||.||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 236 PSVEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp CCHHHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 1111122222111 12222211 122345667889999999999999999999999999874
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-47 Score=360.42 Aligned_cols=228 Identities=21% Similarity=0.305 Sum_probs=184.6
Q ss_pred ccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+...|++.+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 71 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ChhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 34567999999999999999999865 68999999997665555667899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
|||++|+|.+++... .+++.....++.|++.||+|||+ |||+|+.+....
T Consensus 151 Ey~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 224 (346)
T 4fih_A 151 EFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV- 224 (346)
T ss_dssp CCCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-
T ss_pred eCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-
Confidence 999999999999753 38899999999999999999996 999998775432
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
...+..+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .... ..+..........+
T Consensus 225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~----~~~~----~~i~~~~~~~~~~~--- 293 (346)
T 4fih_A 225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP----LKAM----KMIRDNLPPRLKNL--- 293 (346)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHH----HHHHHSSCCCCSCG---
T ss_pred CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH----HHHH----HHHHcCCCCCCCcc---
Confidence 234567999999999999999999999999999999999999999854311 1121 22222111111111
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
......+.+++.+||+.||++|||+.|+++
T Consensus 294 ----~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 ----HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111235678889999999999999999875
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.8e-47 Score=358.93 Aligned_cols=228 Identities=19% Similarity=0.331 Sum_probs=177.1
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.|.+|+++|++++|||||++++++.+++..|||
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 4578999999999999999999864 68999999996543 23456799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
||||++|+|.++|.... ...+++.....++.|++.||+|||+ |||+|+.+....
T Consensus 102 mEy~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp EECCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred EeCCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 99999999999997643 2347888899999999999999996 999998765321
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
...+..+||+.|||||++.+..|+.++||||+||++|||+||+.||.... .......... .... ..
T Consensus 180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-------~~~~~~~i~~-~~~~-----~~ 245 (350)
T 4b9d_A 180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-------MKNLVLKIIS-GSFP-----PV 245 (350)
T ss_dssp -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHH-TCCC-----CC
T ss_pred -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHHHHHHc-CCCC-----CC
Confidence 22345789999999999999999999999999999999999999985431 2222222222 1111 01
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. .....+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 SL----HYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred Cc----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 11235678889999999999999999975
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2e-46 Score=345.76 Aligned_cols=221 Identities=25% Similarity=0.381 Sum_probs=172.6
Q ss_pred cceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEe----CCeeEEE
Q 040641 185 LTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSF----DEEKLLV 257 (435)
Q Consensus 185 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv 257 (435)
+.+.+.||+|+||+||+|++. +++.||||++.... ....+.|.+|+++|++++|||||+++++|.. ++..+||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 467788999999999999865 58899999996543 2335679999999999999999999999865 3457999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccc
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLIS 310 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~ 310 (435)
||||++|+|.++++.. ..+++.....++.|+++||+|||+ |||+|+...
T Consensus 108 mEy~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999999764 348899999999999999999995 999998644
Q ss_pred ccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccc
Q 040641 311 ACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... . ..+...+.........+
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~------~-~~~~~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN------A-AQIYRRVTSGVKPASFD 252 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------H-HHHHHHHTTTCCCGGGG
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc------H-HHHHHHHHcCCCCCCCC
Confidence 3 23345789999999998865 599999999999999999999999853211 1 11223332221111111
Q ss_pred ccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 391 PTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 391 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
... ..++.+++.+||+.||++|||+.|+++
T Consensus 253 ----~~~----~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 ----KVA----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----GCC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----ccC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 124667889999999999999999975
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-46 Score=352.68 Aligned_cols=230 Identities=17% Similarity=0.204 Sum_probs=179.9
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
....|++.+.||+|+||+||+|+.. +|+.||||+++.... +.+|+.+|++++|||||++++++.+++..|||||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3456888899999999999999864 589999999965332 2479999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccccccccccCc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLISACET 314 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~~~~~ 314 (435)
||++|+|.++++... .+++.....++.|++.||+|||+ |||+|+.+.....
T Consensus 131 y~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred ccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 999999999998643 48999999999999999999996 9999987654321
Q ss_pred c----ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccc
Q 040641 315 H----VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 315 ~----~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
. .....+||+.|||||++.+..|+.++|||||||++|||+||+.||...... .+...+.. ......
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~~i~~---~~~~~~--- 276 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCLKIAS---EPPPIR--- 276 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CCHHHHHH---SCCGGG---
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHHHc---CCCCch---
Confidence 1 123468999999999999999999999999999999999999999654321 22221111 110000
Q ss_pred ccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 391 PTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 391 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.. .+. ....+.+++.+||+.||++|||+.|+++.|.+.+
T Consensus 277 -~~-~~~---~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 277 -EI-PPS---CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp -GS-CTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -hc-Ccc---CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 01 111 1234667888999999999999999999887653
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.8e-46 Score=361.37 Aligned_cols=228 Identities=21% Similarity=0.304 Sum_probs=184.9
Q ss_pred ccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+...|++.+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.+|++++|||||++++++.+++..||||
T Consensus 148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 45678999999999999999999864 68999999997665555667899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
|||++|+|.++++.. .+++.....++.|++.||+|||+ |||+|+.+....
T Consensus 228 Ey~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~- 301 (423)
T 4fie_A 228 EFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV- 301 (423)
T ss_dssp ECCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-
T ss_pred eCCCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-
Confidence 999999999999753 38899999999999999999996 999998775432
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .... ..+..........+.
T Consensus 302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~----~~~~----~~i~~~~~~~~~~~~-- 371 (423)
T 4fie_A 302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP----LKAM----KMIRDNLPPRLKNLH-- 371 (423)
T ss_dssp CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHH----HHHHHSCCCCCSCTT--
T ss_pred ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH----HHHH----HHHHcCCCCCCcccc--
Confidence 334567999999999999999999999999999999999999999854321 1121 222221111111111
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.....+.+++.+||+.||++|||+.|+++
T Consensus 372 -----~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 -----KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp -----SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11235667889999999999999999875
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.9e-45 Score=340.79 Aligned_cols=223 Identities=22% Similarity=0.315 Sum_probs=180.8
Q ss_pred cCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
++|++.+.||+|+||+||+|+. .+|+.||||.++... ....+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999986 468999999997532 334567999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC-
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE- 313 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~- 313 (435)
|||++|+|.++++... .+++.....++.|++.||+|||+ |||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998643 48899999999999999999996 999999875432
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ..+ ...+...... + |.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~----~~~----~~~i~~~~~~--~-p~- 255 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----GLI----FAKIIKLEYD--F-PE- 255 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHTCCC--C-CT-
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHH----HHHHHcCCCC--C-Cc-
Confidence 2334567999999999999999999999999999999999999999854321 111 2222222111 0 11
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVL 427 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl 427 (435)
. ...++.+++.+|++.||++|||+.|++
T Consensus 256 --~----~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 256 --K----FFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp --T----CCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred --c----cCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1 112466788999999999999998863
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.8e-44 Score=327.63 Aligned_cols=221 Identities=19% Similarity=0.327 Sum_probs=163.9
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+|++.+.||+|+||+||+|+.. +|+.||||.++... ....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999864 68999999996532 233567999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
||| +|+|.+++... ..+++.....++.|++.||+|||+ |||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp ECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence 999 68999988764 348999999999999999999996 99999876532
Q ss_pred cccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.... ... +...+...... -|..
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-------~~~-~~~~i~~~~~~---~p~~ 234 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-------IPV-LFKNISNGVYT---LPKF 234 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHH-HHHHHHHTCCC---CCTT
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-------HHH-HHHHHHcCCCC---CCCC
Confidence 23345789999999999988775 679999999999999999999985421 111 22222222111 0111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
....+.+++.+||+.||++|||+.|+++
T Consensus 235 -------~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 -------LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -------SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -------CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1124667889999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.2e-45 Score=336.96 Aligned_cols=223 Identities=22% Similarity=0.309 Sum_probs=170.1
Q ss_pred cCcceeeeecccCcceEEEEEcC----CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP----DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
.+|++.+.||+|+||+||+|+.. +++.||||.++... ......+.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999752 46889999996543 2234568899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
|||||++|+|.+++.... .+++.....++.|++.||+|||+ |||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998643 48899999999999999999996 99999875432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ..+. ..+...... .|.
T Consensus 180 ~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~----~~~~----~~i~~~~~~---~p~ 247 (304)
T 3ubd_A 180 E-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR----KETM----TMILKAKLG---MPQ 247 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHH----HHHHHCCCC---CCT
T ss_pred C-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH----HHHH----HHHHcCCCC---CCC
Confidence 2 233457899999999999999999999999999999999999999854321 1121 222111110 111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCC-----HHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPT-----MLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs-----~~evl~ 428 (435)
. ...++.+++.+||+.||++||| ++|+++
T Consensus 248 ~-------~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 248 F-------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp T-------SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred c-------CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1 1124677889999999999998 466653
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.2e-43 Score=329.93 Aligned_cols=226 Identities=22% Similarity=0.359 Sum_probs=163.2
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCC--------
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE-------- 252 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-------- 252 (435)
.+|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35889999999999999999864 689999999965433 23467999999999999999999999987644
Q ss_pred ----eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccc
Q 040641 253 ----EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFG 304 (435)
Q Consensus 253 ----~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfG 304 (435)
..|+|||||++|+|.+++.... .....++.....++.|+++||+|||+ |||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCc
Confidence 3689999999999999997643 22345677788899999999999996 999
Q ss_pred ccccccccCc-----------cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHH
Q 040641 305 LARLISACET-----------HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLV 373 (435)
Q Consensus 305 la~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~ 373 (435)
+|+.+..... ...+..+||+.|||||++.+..|+.++|||||||++|||++ ||.... +..
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------~~~ 234 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ERV 234 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------HHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------HHH
Confidence 9987654321 11234689999999999999999999999999999999997 664211 111
Q ss_pred HHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 374 GWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. ......... |.. .........+++.+||+.||++|||+.|+++
T Consensus 235 ~~-~~~~~~~~~-----p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RT-LTDVRNLKF-----PPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH-HHHHHTTCC-----CHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-HHHHhcCCC-----CCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 111111111 100 1122234567889999999999999999986
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.4e-42 Score=323.36 Aligned_cols=255 Identities=34% Similarity=0.559 Sum_probs=211.5
Q ss_pred cccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.....+|++.+.||+|+||.||+|++.+++.||||++........+.|.+|++++++++|||||+++++|...+..++||
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY 114 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 44567899999999999999999998889999999987766566778999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC-
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE- 313 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~- 313 (435)
||+++|+|.+++.........+++..+..++.++++||+|||+ |||+++......
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 194 (321)
T 2qkw_B 115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194 (321)
T ss_dssp ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC
T ss_pred EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 9999999999887654334468999999999999999999996 899987654321
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
........||+.|+|||++.+..++.++|||||||++|||+||+.||...... .......|..............++..
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (321)
T 2qkw_B 195 THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQLEQIVDPNL 273 (321)
T ss_dssp CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTTTCCCSSSSSSC
T ss_pred cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhccccccHHHhcChhh
Confidence 22234456999999999988888999999999999999999999998754432 33455566555555555555666665
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
...........+.+++.+||+.||++|||+.||++.|+.++
T Consensus 274 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 55556777888999999999999999999999999999864
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-41 Score=321.40 Aligned_cols=258 Identities=38% Similarity=0.626 Sum_probs=210.9
Q ss_pred ccccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccc-cHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQ-GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
..+.....+|++.+.||+|+||.||+|+..+++.||||++...... ....|.+|++++++++|||||+++++|...+..
T Consensus 23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 102 (326)
T 3uim_A 23 RELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 102 (326)
T ss_dssp HHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCC
T ss_pred HHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCce
Confidence 3445566789999999999999999999888999999999754322 234689999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLAR 307 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~ 307 (435)
++||||+++|+|.++++........+++..+..++.+++.||+|||+ |||+++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 182 (326)
T 3uim_A 103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182 (326)
T ss_dssp EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcccc
Confidence 99999999999999998765555669999999999999999999984 899998
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCc-ccccCCcHHHHHHHHhccCCCC
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEF-QEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
..............||+.|+|||++.+..++.++|||||||++|||+||+.||.... ..........|+..........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (326)
T 3uim_A 183 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 262 (326)
T ss_dssp ECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCST
T ss_pred ccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhh
Confidence 765444444455679999999999888889999999999999999999999985321 1122344556655555555555
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhh
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEI 433 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i 433 (435)
...++.............+.+++.+||+.||++|||+.||++.|++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 263 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 56666665666778888999999999999999999999999999853
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1e-40 Score=337.23 Aligned_cols=228 Identities=22% Similarity=0.347 Sum_probs=183.0
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
..+|++.+.||+|+||+||+|+.. +|+.||||.+........+.+.+|+++|+.++|||||++++++.+++..+|||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 357999999999999999999864 6899999999765555567789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------cccccccccccCc
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------------DFGLARLISACET 314 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------DfGla~~~~~~~~ 314 (435)
|++|+|.+++... ...+++.....++.|++.||+|||+ |||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 9999999998653 2358899999999999999999996 99999887543
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ... ...+...... +++...
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~----~~~----~~~i~~~~~~--~~~~~~ 380 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND----DET----LRNVKSCDWN--MDDSAF 380 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----HHH----HHHHHTTCCC--CCSGGG
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH----HHH----HHHHHhCCCC--CCcccc
Confidence 233456899999999999999999999999999999999999999864321 111 1222211110 111111
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. ....+.+++.+||+.||++|||+.|+++
T Consensus 381 ~~----~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 381 SG----ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TT----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cC----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 1234668889999999999999999986
No 19
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=320.79 Aligned_cols=236 Identities=19% Similarity=0.245 Sum_probs=173.8
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEe------CCe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSF------DEE 253 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~~ 253 (435)
.+|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 47999999999999999999864 689999999965432 234678899999999999999999998764 356
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.|||||||+ |+|.+++... ..+++.....++.|++.||+|||+ |||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~----~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS----QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 7799888653 358999999999999999999996 99999876
Q ss_pred cccC---ccccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 310 SACE---THVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 310 ~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
.... ....+..+||+.|||||++.+. .++.++||||+||++|||+||+.||.... ..+....+.........
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~----~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN----YVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS----HHHHHHHHHHHHCCCCG
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC----HHHHHHHHHHhcCCCCh
Confidence 4321 2234567999999999987764 67999999999999999999999985432 11222222222111110
Q ss_pred Cccc-------------cccccCCCCH-----HHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 386 DDVL-------------DPTVLNAGSK-----PMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 386 ~~~~-------------~~~~~~~~~~-----~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.... .+.. .+... .....+.+++.+|+..||++|||+.|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPR-QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GGTC-----CHHHHHHSSCCC-CCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHhhhhhhhhhhhhhhcCCCc-CCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000 0000 00000 01134678899999999999999999875
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.7e-40 Score=313.90 Aligned_cols=173 Identities=24% Similarity=0.282 Sum_probs=144.6
Q ss_pred ccCcceeeeecccCcceEEEEEcC----CCCEEEEEEccccccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP----DGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 256 (435)
..+|++.+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|+.+ +|||||++++++.+.+..++
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 357999999999999999999742 46789999986533 345688999999988 69999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLISA 311 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~~ 311 (435)
|||||++|+|.++++ .+++.....++.|++.||+|||+ |||+|+....
T Consensus 98 vmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 98 AMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp EEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred EEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 999999999999884 27888899999999999999996 9999986532
Q ss_pred cCc---------------------------cccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHhCCCCCCCC
Q 040641 312 CET---------------------------HVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVTAKEPTGPE 363 (435)
Q Consensus 312 ~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~tg~~p~~~~ 363 (435)
... ...+..+||+.|||||++.+. .|+.++||||+|||+|||+||+.||...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 211 112345799999999988764 5899999999999999999999998543
No 21
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=302.39 Aligned_cols=234 Identities=24% Similarity=0.402 Sum_probs=185.7
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
...+|.+.+.||+|+||.||+|+.. +++.||+|++........+.|.+|++++++++|||||++++++..++..++|||
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 4568899999999999999999865 588999999876655667789999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCcc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACETH 315 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~~ 315 (435)
|+++|+|.+++.... ..+++..+..++.|+++||+|||+ |||+++........
T Consensus 88 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 88 YIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CCTTCBHHHHHHHCC---TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred ecCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 999999999998642 348999999999999999999996 99999875432211
Q ss_pred c-------------cccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccC--CcHHHHHHHHh
Q 040641 316 V-------------STDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEG--ANLVGWVFQKM 380 (435)
Q Consensus 316 ~-------------~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~--~~~~~~~~~~~ 380 (435)
. .....||+.|+|||++.+..++.++|||||||++|||++|..|+......... .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR-- 242 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH--
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc--
Confidence 1 11457999999999999999999999999999999999999987543322211 111111110
Q ss_pred ccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 381 KKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ..+. ....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 243 --~-----~~~~--------~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 243 --Y-----CPPN--------CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp --T-----CCTT--------CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --c-----CCCC--------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 0000 0114667889999999999999999999998863
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-39 Score=304.41 Aligned_cols=240 Identities=31% Similarity=0.496 Sum_probs=178.0
Q ss_pred ccccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE 253 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 253 (435)
..+..+..+|++.+.||+|+||.||+|+. +++.||||.+..... ...+.|.+|++++++++|||||++++++...+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 34566778999999999999999999987 578999999865432 334679999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------cccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------------DFGLAR 307 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------DfGla~ 307 (435)
.++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+ |||+++
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred eEEEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 999999999999999997532 12348899999999999999999985 889887
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
..... ........||+.|+|||.+.+..++.++|||||||++|||+||+.||..... ..... ..........
T Consensus 188 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~----~~~~~---~~~~~~~~~~ 259 (309)
T 3p86_A 188 LKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP----AQVVA---AVGFKCKRLE 259 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH----HHHHH---HHHHSCCCCC
T ss_pred ccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHH---HHHhcCCCCC
Confidence 54332 1223346799999999999999999999999999999999999999854321 11111 1111110000
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.+ . .....+.+++.+||+.||++|||+.+|++.|++++
T Consensus 260 --~~---~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 260 --IP---R----NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp --CC---T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CC---c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01 1 11125678889999999999999999999999875
No 23
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.8e-39 Score=321.27 Aligned_cols=239 Identities=26% Similarity=0.395 Sum_probs=189.3
Q ss_pred cccccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 175 ISMFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 175 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
...|..+..+|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+++|++++|||||++++++. .+..
T Consensus 180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 345677888999999999999999999999888899999997543 34678999999999999999999999986 6678
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++|||||++|+|.++++... ...+++...+.++.|+|+||+|||+ |||+++...
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999999997542 1247888899999999999999996 999998765
Q ss_pred ccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 311 ACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
...........+|+.|+|||++....++.++|||||||++|||+| |+.||.... ...+... +..... ..
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~----~~~~~~~----i~~~~~--~~ 405 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS----NPEVIRA----LERGYR--MP 405 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----HHHHHHH----HHHTCC--CC
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC----HHHHHHH----HHcCCC--CC
Confidence 432222334557889999999888889999999999999999999 998985321 1112221 111110 01
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.| ..+...+.+++.+||+.||++||||.+|++.|+++.
T Consensus 406 ~~-------~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 406 RP-------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CC-------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 11 112235778999999999999999999999999874
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.1e-39 Score=309.61 Aligned_cols=240 Identities=30% Similarity=0.420 Sum_probs=187.4
Q ss_pred ccccccCcceeeeecccCcceEEEEEcC--------CCCEEEEEEcccccc-ccHHHHHHHHHHhccC-CCCCceeEEEE
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLP--------DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKV-KHQNLVLLLGY 247 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~ 247 (435)
+..+..+|++.+.||+|+||.||+|+.. ++..||||.++.... ...+.+.+|+++++++ +|||||+++++
T Consensus 76 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 155 (370)
T 2psq_A 76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 155 (370)
T ss_dssp TBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEE
T ss_pred ccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 4456678999999999999999999752 345799999975432 3456799999999999 89999999999
Q ss_pred EEeCCeeEEEEecccCCCHHHHHHhhCC------------CCCCCCHHHHHHHHHHhhhccceeec--------------
Q 040641 248 CSFDEEKLLVYEYMVNGSLDLWLRNATG------------SHEVLDRAKRYKIACSSARGLAFLHQ-------------- 301 (435)
Q Consensus 248 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gl~yLH~-------------- 301 (435)
|...+..++||||+++|+|.+++..... ....+++...+.++.|+++||+|||+
T Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 235 (370)
T 2psq_A 156 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 235 (370)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred EccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEE
Confidence 9999999999999999999999986432 12357899999999999999999996
Q ss_pred ----------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccC
Q 040641 302 ----------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEG 369 (435)
Q Consensus 302 ----------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~ 369 (435)
|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.... .
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~----~ 311 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP----V 311 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----G
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC----H
Confidence 9999986654322 22234567889999999988899999999999999999999 888875422 1
Q ss_pred CcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 370 ANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+.. .+....... ... .+...+.+++.+||+.||++|||+.|+++.|++++
T Consensus 312 ~~~~~----~~~~~~~~~-----~~~----~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 312 EELFK----LLKEGHRMD-----KPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp GGHHH----HHHTTCCCC-----CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHH----HHhcCCCCC-----CCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 12222 121111110 111 11235678889999999999999999999999875
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.5e-39 Score=294.27 Aligned_cols=236 Identities=25% Similarity=0.422 Sum_probs=188.2
Q ss_pred ccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
|.....+|++.+.||+|+||.||+|+..+++.||+|++..... ..+++.+|++++++++||||+++++++..++..++|
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 5 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred EEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 4455678999999999999999999988888999999975432 346799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|.+++.... ..+++.....++.++++||+|||+ |||+++......
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp EECCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EEeCCCCcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 99999999999997542 358899999999999999999996 899998765433
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
........||+.|+|||...+..++.++||||+|+++|||+| |+.||..... ... ...+.... ....+.
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~----~~~----~~~~~~~~--~~~~~~ 230 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEV----VEDISTGF--RLYKPR 230 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHH----HHHHHTTC--CCCCCT
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH----HHH----HHHHhcCc--cCCCCC
Confidence 333344567888999999988889999999999999999999 8888753211 111 11121110 011111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 231 ~-------~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 231 L-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp T-------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred c-------CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 1 1134678889999999999999999999999875
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2e-38 Score=296.38 Aligned_cols=228 Identities=21% Similarity=0.354 Sum_probs=182.4
Q ss_pred ccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+..+|++.+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++|||||++++++...+..++||
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 3456899999999999999999985 568999999997666566678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
||+++|+|.+++... .+++.....++.+++.||+|||+ |||+++......
T Consensus 97 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 170 (297)
T 3fxz_A 97 EYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (297)
T ss_dssp ECCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred ECCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-
Confidence 999999999999753 37889999999999999999996 999987765432
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
.......||+.|+|||.+.+..++.++|||||||++|||+||+.||..... ........... ......+.
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~~~~~-~~~~~~~~-- 240 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATNG-TPELQNPE-- 240 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHHC-SCCCSCGG--
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-CCCCCCcc--
Confidence 223456899999999999888999999999999999999999999854321 11111111111 11111111
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.....+.+++.+||+.||++|||+.|+++
T Consensus 241 -----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 241 -----KLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -----GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----ccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11234678889999999999999999975
No 27
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.2e-39 Score=321.02 Aligned_cols=239 Identities=23% Similarity=0.382 Sum_probs=190.5
Q ss_pred ccccccccCcceeeeecccCcceEEEEEcCC-CCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATLPD-GKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
..|+....+|++.+.||+|+||.||+|++.. +..||||.++... ...++|.+|+++|++++|||||+++|+|...+..
T Consensus 213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 291 (495)
T 1opk_A 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291 (495)
T ss_dssp SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence 3466677889999999999999999999764 7899999997543 3467899999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++|||||++|+|.++++... ...+++..++.++.|+++||+|||+ |||+++...
T Consensus 292 ~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999998643 2358899999999999999999996 999998765
Q ss_pred ccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 311 ACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
...........+|+.|+|||++....++.++|||||||++|||+| |+.||.... ...+...+ ..... ..
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~----~~~~~~~~----~~~~~--~~ 439 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELL----EKDYR--ME 439 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC----GGGHHHHH----HTTCC--CC
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC----HHHHHHHH----HcCCC--CC
Confidence 433333344567889999999888889999999999999999999 888875322 12222222 11110 00
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.| ..+...+.+++.+||+.||++||||.+|++.|+++.
T Consensus 440 ~~-------~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 440 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CC-------CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 01 111235678899999999999999999999999874
No 28
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.8e-39 Score=302.35 Aligned_cols=245 Identities=25% Similarity=0.339 Sum_probs=183.7
Q ss_pred ccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe----
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE---- 253 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 253 (435)
+.....+|++.+.||+|+||.||+|++. ++.||||++..... ....+.+|+.++++++|||||++++++.....
T Consensus 19 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 19 LYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp EEETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cccchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 3455678999999999999999999875 78999999965432 33456779999999999999999999987543
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------------
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------------- 301 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------------- 301 (435)
.++||||+++|+|.++++.. .+++..+..++.|+++||+|||+
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 69999999999999999753 38999999999999999999983
Q ss_pred --cccccccccccCc-cccccccccCCCcCCcCCCC-----CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccC----
Q 040641 302 --DFGLARLISACET-HVSTDIAGTLGYIPPEYGQS-----RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEG---- 369 (435)
Q Consensus 302 --DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~---- 369 (435)
|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.........
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 251 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence 8999977654322 22334679999999998876 35567899999999999999999998653321110
Q ss_pred -----CcHHHHHHHHhccCCCCccccccccC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 370 -----ANLVGWVFQKMKKQQADDVLDPTVLN-AGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 370 -----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.....+ ......... .|.... .........+.+++.+||+.||++|||+.||++.|+++.
T Consensus 252 ~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 252 EIGQHPSLEDM-QEVVVHKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHCSSCCHHHH-HHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhccCCchhhh-hhhhhcccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 011111 111111111 111100 011234556889999999999999999999999999874
No 29
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.5e-39 Score=312.67 Aligned_cols=238 Identities=23% Similarity=0.336 Sum_probs=185.1
Q ss_pred cccccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
.|.....+|++.+.||+|+||.||+|++. +++.||||.++.... ...+.|.+|+++|++++|||||+++|+|...+..
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 187 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence 45566778999999999999999999976 689999999875432 2335688999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++||||+++|+|.++++... ..+++.....++.|+++||+|||+ |||+++...
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999999997642 247889999999999999999996 999998644
Q ss_pred ccCcccc-ccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 311 ACETHVS-TDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 311 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
....... ....+|+.|+|||.+....++.++|||||||++|||+| |+.||..... ... ...+..... .
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~----~~~----~~~~~~~~~--~ 334 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN----QQT----REFVEKGGR--L 334 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH----HHH----HHHHHTTCC--C
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHH----HHHHHcCCC--C
Confidence 3211111 12346778999999888889999999999999999999 8888753211 111 111211110 0
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..|. .+...+.+++.+||+.||++||||.+|++.|+++.
T Consensus 335 ~~~~-------~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 335 PCPE-------LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp CCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC-------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 1111 11235678899999999999999999999999874
No 30
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.6e-38 Score=318.14 Aligned_cols=225 Identities=20% Similarity=0.259 Sum_probs=173.4
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHH---HHHHHHhccCCCCCceeEEEEEEeCCe
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQF---TAEMETLGKVKHQNLVLLLGYCSFDEE 253 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~H~niv~l~g~~~~~~~ 253 (435)
...+|++.++||+|+||+||+|+.. +|+.||||++++.. ......+ ..++.+++.++|||||++++++.+.+.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 3467999999999999999999865 58999999996432 1222223 345778889999999999999999999
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.|+|||||+||+|..+|.... .+++.....++.|++.||+|||+ |||+|+.+
T Consensus 267 lylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999998643 48899999999999999999996 99999876
Q ss_pred cccCccccccccccCCCcCCcCCC-CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQ-SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
.... ....+||+.|||||++. +..|+.++||||+||++|||+||+.||..... .+... +.........
T Consensus 343 ~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~----~~~~~-i~~~i~~~~~--- 411 (689)
T 3v5w_A 343 SKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT----KDKHE-IDRMTLTMAV--- 411 (689)
T ss_dssp SSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC----CCHHH-HHHHHHHCCC---
T ss_pred CCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HHHHH-HHHhhcCCCC---
Confidence 5432 34578999999999986 46799999999999999999999999964321 11111 1222111111
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCC-----HHHHH
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPT-----MLHVL 427 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs-----~~evl 427 (435)
.-|.. ...++.+++.+|++.||++|++ +.||+
T Consensus 412 ~~p~~-------~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 412 ELPDS-------FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp CCCTT-------SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred CCCcc-------CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 01111 1124667888999999999998 57765
No 31
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.2e-38 Score=315.19 Aligned_cols=238 Identities=27% Similarity=0.401 Sum_probs=182.0
Q ss_pred ccccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..|..+..+|++.+.||+|+||.||+|.+.++..||||.++... ...++|.+|+++|++++|||||++++++.. +..+
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 254 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 254 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE
Confidence 35677788999999999999999999999888889999997543 345689999999999999999999999866 7789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+|||||++|+|.++++... ...+++.....++.|+++||+|||+ |||+++....
T Consensus 255 iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp EEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred EEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999999997532 1247889999999999999999996 9999987654
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
..........+|+.|+|||.+....++.++|||||||++|||+| |+.||..... ..+. ..+..... ...
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~----~~~~----~~i~~~~~--~~~ 402 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVL----DQVERGYR--MPC 402 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHH----HHHHTTCC--CCC
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH----HHHH----HHHHcCCC--CCC
Confidence 33333334567889999999888889999999999999999999 8888753211 1111 22211110 001
Q ss_pred ccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 391 PTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 391 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
| ..+...+.+++.+||+.||++||||.+|++.|+++.
T Consensus 403 ~-------~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 403 P-------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred C-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 1 112235678899999999999999999999999874
No 32
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1e-38 Score=307.69 Aligned_cols=234 Identities=22% Similarity=0.406 Sum_probs=171.8
Q ss_pred cccCcceeeeecccCcceEEEEEcC----CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP----DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
...+|++.+.||+|+||.||+|++. ++..||||.++... ....+.|.+|++++++++|||||+++|+|...+..+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 4467899999999999999999864 46789999997543 234567999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|.++++... ..+++..+..++.++++||+|||+ |||+++....
T Consensus 123 lv~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 9999999999999997542 348899999999999999999996 9999987654
Q ss_pred cCccc--cccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 312 CETHV--STDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 312 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
..... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+. ..+....
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~----~~~~----~~i~~~~---- 267 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----QDVI----KAVDEGY---- 267 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH----HHHH----HHHHTTE----
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH----HHHH----HHHHcCC----
Confidence 32211 122345788999999988889999999999999999998 9999853211 1111 1111110
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+. .......+.+++.+||+.||++||+|.+|++.|++++
T Consensus 268 ~~~~-----~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 268 RLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ECCC-----CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC-----CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 0000 0112235778999999999999999999999998874
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.4e-38 Score=295.26 Aligned_cols=238 Identities=22% Similarity=0.381 Sum_probs=186.6
Q ss_pred ccccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..|.....+|++.+.||+|+||.||+|.+.++..||||++..... ..+++.+|++++++++||||+++++++...+..+
T Consensus 17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (283)
T 3gen_A 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 95 (283)
T ss_dssp CTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred CCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeE
Confidence 355667789999999999999999999998888999999975432 3467999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|.+++.... ..+++.....++.+++.||+|||+ |||+++....
T Consensus 96 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 96 IITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EEECCCTTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 9999999999999997632 348899999999999999999996 8999887654
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
..........+|+.|+|||...+..++.++||||||+++|||+| |+.||..... .... ..+.... ....
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~----~~~~----~~~~~~~--~~~~ 242 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN----SETA----EHIAQGL--RLYR 242 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH----HHHH----HHHHTTC--CCCC
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh----hHHH----HHHhccc--CCCC
Confidence 33233334567888999999888889999999999999999999 9999854221 1111 1111111 0111
Q ss_pred ccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 391 PTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 391 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
+.. . ...+.+++.+||+.||++|||+.++++.|++++
T Consensus 243 ~~~---~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 243 PHL---A----SEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp CTT---C----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCc---C----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 111 1 135678889999999999999999999999875
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.5e-38 Score=290.25 Aligned_cols=236 Identities=25% Similarity=0.391 Sum_probs=187.5
Q ss_pred cccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
+....+|++.+.||+|+||.||+|...++..||||.+..... ..+++.+|++++.+++||||+++++++...+..++||
T Consensus 4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred EechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 345578999999999999999999988888999999975433 3467999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
||+++|+|.+++.... ..+++..+..++.++++||+|||+ |||+++.......
T Consensus 83 e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp ECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred EccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999999997642 248899999999999999999996 8999987654433
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.......+|+.|+|||...+..++.++||||||+++|||+| |+.||..... ..... ...... ....+..
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~-~~~~~~--~~~~~~~ 229 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-------SEVVL-KVSQGH--RLYRPHL 229 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHH-HHHTTC--CCCCCTT
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-------HHHHH-HHHcCC--CCCCCCc
Confidence 33344567788999999888889999999999999999999 8989853221 11111 111111 1111111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhhC
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIVD 435 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~~ 435 (435)
. ...+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 230 ~-------~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 230 A-------SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp S-------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred C-------hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 1 1246788899999999999999999999998753
No 35
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=300.47 Aligned_cols=235 Identities=23% Similarity=0.378 Sum_probs=181.5
Q ss_pred ccccCcceeeeecccCcceEEEEEcC----CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP----DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
....+|++.+.||+|+||.||+|++. .+..||||.++... ....+.|.+|++++++++|||||++++++...+..
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 34568999999999999999999874 34569999997543 33456799999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++||||+++|+|.++++... ..+++..+..++.+++.||+|||+ |||+++...
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEeeCCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 99999999999999997542 348999999999999999999996 999998765
Q ss_pred ccCc--cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 311 ACET--HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 311 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
.... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+. ..+......
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~----~~~~----~~~~~~~~~- 273 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVI----SSVEEGYRL- 273 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH----HHHH----HHHHTTCCC-
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH----HHHH----HHHHcCCCC-
Confidence 4321 12233456788999999988889999999999999999999 9999854221 1111 112111100
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+ ......+.+++.+||+.||++|||+.+|++.|++++
T Consensus 274 -~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 274 -PAP-------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp -CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCC-------CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 001 111235678899999999999999999999999875
No 36
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.6e-38 Score=310.12 Aligned_cols=232 Identities=27% Similarity=0.392 Sum_probs=183.4
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCC-eeE
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE-EKL 255 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~ 255 (435)
.|.....+|++.+.||+|+||.||+|.+. ++.||||.++... ..+.|.+|+++|++++|||||+++++|...+ ..+
T Consensus 187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 263 (450)
T 1k9a_A 187 GWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 263 (450)
T ss_dssp TCBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEE
T ss_pred ccccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceE
Confidence 35567788999999999999999999985 7899999997543 4578999999999999999999999987765 789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+|||||++|+|.++++... ...+++...+.++.|+++||+|||+ |||+++....
T Consensus 264 iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EEEECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999998653 2347888999999999999999996 9999875432
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
. .....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.... ...+...+ ..... ...
T Consensus 342 ~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~----~~~~~~~i----~~~~~--~~~ 407 (450)
T 1k9a_A 342 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP----LKDVVPRV----EKGYK--MDA 407 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC----TTTHHHHH----HTTCC--CCC
T ss_pred c----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHH----HcCCC--CCC
Confidence 1 122367889999999988899999999999999999999 999985432 12222222 11110 001
Q ss_pred ccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 391 PTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 391 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
| . .+...+.+++.+||+.||++||||.+|++.|+++.
T Consensus 408 p---~----~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 408 P---D----GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp C---T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---C----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1 1 11235778899999999999999999999999874
No 37
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.9e-38 Score=304.62 Aligned_cols=246 Identities=28% Similarity=0.414 Sum_probs=188.5
Q ss_pred cccccccccccCcceeeeecccCcceEEEEEc------CCCCEEEEEEcccccc-ccHHHHHHHHHHhccC-CCCCceeE
Q 040641 173 INISMFQQPLLKLTLVDILEDGGFGTVYKATL------PDGKTVAVKKFSQAKT-QGHRQFTAEMETLGKV-KHQNLVLL 244 (435)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l 244 (435)
.....|..+..+|++.+.||+|+||.||+|++ .+++.||||+++.... ...+.|.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34456778889999999999999999999973 2467899999975433 3346799999999999 79999999
Q ss_pred EEEEEeCCe-eEEEEecccCCCHHHHHHhhCCC-----------------------------------------------
Q 040641 245 LGYCSFDEE-KLLVYEYMVNGSLDLWLRNATGS----------------------------------------------- 276 (435)
Q Consensus 245 ~g~~~~~~~-~~lv~ey~~~g~L~~~l~~~~~~----------------------------------------------- 276 (435)
+++|...+. .++||||+++|+|.++++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987554 89999999999999999764321
Q ss_pred ---------------CCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC-ccc
Q 040641 277 ---------------HEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE-THV 316 (435)
Q Consensus 277 ---------------~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~-~~~ 316 (435)
...+++.....++.|+++||+|||+ |||+++...... ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 251 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEE
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchh
Confidence 1128889999999999999999996 999998654322 223
Q ss_pred cccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccC
Q 040641 317 STDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLN 395 (435)
Q Consensus 317 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (435)
.....||+.|+|||++.+..++.++|||||||++|||+| |+.||..... ... ....+....... .+.
T Consensus 252 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~---~~~~~~~~~~~~--~~~--- 319 (359)
T 3vhe_A 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEE---FCRRLKEGTRMR--APD--- 319 (359)
T ss_dssp C--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHH---HHHHHHHTCCCC--CCT---
T ss_pred ccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch----hHH---HHHHHHcCCCCC--CCC---
Confidence 345678999999999888889999999999999999999 9999854321 111 111222111111 111
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 396 AGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 396 ~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ....+.+++.+||+.||++|||+.||++.|++++
T Consensus 320 ~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 320 Y----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1 1135678889999999999999999999999875
No 38
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.7e-38 Score=295.23 Aligned_cols=242 Identities=26% Similarity=0.398 Sum_probs=181.2
Q ss_pred cccCcceeeeecccCcceEEEEEc-----CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeC--Ce
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-----PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD--EE 253 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~ 253 (435)
...+|++.+.||+|+||.||+|++ .+++.||||++........+.|.+|++++++++|||||+++++|... ..
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 456899999999999999999984 25789999999866655667899999999999999999999998653 55
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.++||||+++|+|.+++.... ..+++.....++.|++.||+|||+ |||+++..
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred eEEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 899999999999999997642 348899999999999999999996 99999876
Q ss_pred cccCc--cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCccc--------ccCCcHHHHHHHH
Q 040641 310 SACET--HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQE--------KEGANLVGWVFQK 379 (435)
Q Consensus 310 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~--------~~~~~~~~~~~~~ 379 (435)
..... .......||..|+|||.+.+..++.++|||||||++|||+||..|+...... .............
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 43321 1223345788899999988888999999999999999999999987542210 0000011111111
Q ss_pred hccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 380 MKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
+...... +....+...+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 245 ~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 245 LKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCcC---------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1111100 001112235778899999999999999999999999875
No 39
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.1e-38 Score=292.73 Aligned_cols=236 Identities=22% Similarity=0.354 Sum_probs=179.3
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.|.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357999999999999999999854 68899999985432 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|.+++.... .+++.....++.++++||+|||+ |||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999997642 48899999999999999999996 999998765433
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
........||+.|+|||.+.+..++.++|||||||++|||+||+.||.... .............. .. .+..
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~~~~-~~-~~~~ 236 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-------AVSIAIKHIQDSVP-NV-TTDV 236 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-------HHHHHHHHHSSCCC-CH-HHHS
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHhhccCC-Cc-chhc
Confidence 333345679999999999988889999999999999999999999985432 11122222222111 10 0000
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCC-CHHHHHHHHhhhh
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRP-TMLHVLKLLHEIV 434 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RP-s~~evl~~L~~i~ 434 (435)
.. .....+.+++.+||+.||++|| ++.++.+.|.++.
T Consensus 237 ~~----~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 237 RK----DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp CT----TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred cc----CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 11 1123567788999999999999 9999999998764
No 40
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.8e-38 Score=297.56 Aligned_cols=227 Identities=22% Similarity=0.338 Sum_probs=170.8
Q ss_pred ccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
.-..+|++.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++|||||++++++...+..++|
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 3456899999999999999999985 5689999999865432 2345789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
||||++|+|.+++.... .+++.....++.|++.||+|||+ |||+++......
T Consensus 87 ~E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp EECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 99999999999997643 48899999999999999999996 999987655433
Q ss_pred ccccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
.......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .... ...+...... .|.
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-------~~~~-~~~i~~~~~~---~p~ 231 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-------VMAL-YKKIMRGKYD---VPK 231 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHH-HHHHHHTCCC---CCT
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-------HHHH-HHHHHcCCCC---CCC
Confidence 333445689999999999887765 899999999999999999999985421 1111 1222211110 111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~-------~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 232 W-------LSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp T-------CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C-------CCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1 1124567888999999999999999985
No 41
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2e-37 Score=292.85 Aligned_cols=224 Identities=21% Similarity=0.311 Sum_probs=179.0
Q ss_pred CcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEeccc
Q 040641 184 KLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEYMV 262 (435)
Q Consensus 184 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 262 (435)
.|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||||++++++...+..++||||++
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 125 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ 125 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence 4677789999999999999875 699999999976665666789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCccccc
Q 040641 263 NGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACETHVST 318 (435)
Q Consensus 263 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~~~~~ 318 (435)
+|+|.+++... .+++..+..++.++++||+|||+ |||+++...... ....
T Consensus 126 ~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~ 199 (321)
T 2c30_A 126 GGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRK 199 (321)
T ss_dssp SCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBC
T ss_pred CCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc-cccc
Confidence 99999988642 48999999999999999999996 999988765422 2234
Q ss_pred cccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCC
Q 040641 319 DIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGS 398 (435)
Q Consensus 319 ~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (435)
...||+.|+|||+..+..++.++|||||||++|||+||+.||..... ... ...+..........+
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-------~~~-~~~~~~~~~~~~~~~------- 264 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQA-MKRLRDSPPPKLKNS------- 264 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHH-HHHHHHSSCCCCTTG-------
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHH-HHHHhcCCCCCcCcc-------
Confidence 56899999999999988999999999999999999999999854311 111 111211111111010
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 399 KPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 399 ~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
......+.+++.+||+.||++|||+.|+++
T Consensus 265 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 265 HKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011234667888999999999999999985
No 42
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=304.75 Aligned_cols=239 Identities=25% Similarity=0.379 Sum_probs=185.4
Q ss_pred cccccCcceeeeecccCcceEEEEEcC------CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeC
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLP------DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD 251 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 251 (435)
..+..+|++.+.||+|+||.||+|++. +++.||||+++... ......+.+|+.++++++|||||++++++...
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 345678999999999999999999853 36689999996542 33456789999999999999999999999999
Q ss_pred CeeEEEEecccCCCHHHHHHhhCC---CCCCCCHHHHHHHHHHhhhccceeec---------------------------
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATG---SHEVLDRAKRYKIACSSARGLAFLHQ--------------------------- 301 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------- 301 (435)
...++||||+++|+|.++++.... ....+++...+.++.|+++||+|||+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999999987542 22458899999999999999999996
Q ss_pred cccccccccccC-ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHH
Q 040641 302 DFGLARLISACE-THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQK 379 (435)
Q Consensus 302 DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~ 379 (435)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||+| |..||..... ..+. ..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~----~~~~----~~ 298 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN----QEVL----EF 298 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHH----HH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHH----HH
Confidence 899887653322 122334568999999999888889999999999999999998 8888753211 1121 22
Q ss_pred hccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 380 MKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
+....... .+ . .....+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 299 i~~~~~~~--~~---~----~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 299 VTSGGRMD--PP---K----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHTTCCCC--CC---T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcCCCCC--CC---c----cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 21111100 00 1 11235678899999999999999999999998763
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-38 Score=298.96 Aligned_cols=241 Identities=27% Similarity=0.448 Sum_probs=186.9
Q ss_pred ccccccCcceeeeecccCcceEEEEEcC------CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEe
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLP------DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSF 250 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 250 (435)
+..+..+|++.+.||+|+||.||+|+.. +++.||||.++.... ...+.|.+|++++++++||||++++++|..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 4556788999999999999999999864 347899999975432 335679999999999999999999999999
Q ss_pred CCeeEEEEecccCCCHHHHHHhhCCC--------------------CCCCCHHHHHHHHHHhhhccceeec---------
Q 040641 251 DEEKLLVYEYMVNGSLDLWLRNATGS--------------------HEVLDRAKRYKIACSSARGLAFLHQ--------- 301 (435)
Q Consensus 251 ~~~~~lv~ey~~~g~L~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~gl~yLH~--------- 301 (435)
.+..++||||+++|+|.+++...... ...+++..++.++.|+++||+|||+
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk 201 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA 201 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 99999999999999999999864211 1458899999999999999999996
Q ss_pred ---------------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCc
Q 040641 302 ---------------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEF 364 (435)
Q Consensus 302 ---------------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~ 364 (435)
|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 8999886543221 22234578999999999888889999999999999999999 888985321
Q ss_pred ccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhhC
Q 040641 365 QEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIVD 435 (435)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~~ 435 (435)
. .. ....+........ + . .....+.+++.+||+.||++|||+.+|++.|+++.+
T Consensus 282 ~-------~~-~~~~~~~~~~~~~--~---~----~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 282 H-------EE-VIYYVRDGNILAC--P---E----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp H-------HH-HHHHHHTTCCCCC--C---T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred h-------HH-HHHHHhCCCcCCC--C---C----CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 1 11 1122222211110 1 1 112356788999999999999999999999998863
No 44
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-37 Score=286.52 Aligned_cols=236 Identities=25% Similarity=0.412 Sum_probs=186.7
Q ss_pred ccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
|.....+|++.+.||+|+||.||+|...+++.||+|.+..... ..+.+.+|++++++++||||+++++++..++..++|
T Consensus 3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred eEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 3455678999999999999999999988888999999975433 346799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|.+++.... ..+++.....++.++++||+|||+ |||+++......
T Consensus 82 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp ECCCTTCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EeCCCCCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 99999999999997642 347889999999999999999996 899987654322
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
........||+.|+|||...+..++.++||||||+++|||+| |+.||..... ... ...+..... ...+.
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~----~~~i~~~~~--~~~~~ 228 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEV----VEDISTGFR--LYKPR 228 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHH----HHHHHTTCC--CCCCT
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH----HHH----HHHHhcCCc--CCCCc
Confidence 222334567889999999888889999999999999999999 8888753211 111 111211110 01111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 229 ~-------~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 229 L-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp T-------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred c-------CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 1235678889999999999999999999999875
No 45
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.2e-37 Score=293.04 Aligned_cols=223 Identities=21% Similarity=0.295 Sum_probs=177.9
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
..+|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++|||||++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45799999999999999999986 578999999996543 234567889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
||+++|+|.+++.... .+++.....++.|+++||+|||+ |||+++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-- 167 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC--
Confidence 9999999999997643 38889999999999999999996 99999876532
Q ss_pred cccccccccCCCcCCcCCCCCCCC-CcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMST-TRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~-~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
......+||+.|+|||++.+..++ .++||||+||++|||+||+.||.... .... ...+...... .|..
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~-~~~i~~~~~~---~p~~ 236 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-------LKEL-RERVLRGKYR---IPFY 236 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHH-HHHHHHCCCC---CCTT
T ss_pred CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-------HHHH-HHHHHhCCCC---CCCC
Confidence 233457899999999998777664 79999999999999999999985432 1111 1122111110 1111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
....+.+++.+||+.||++|||+.|+++
T Consensus 237 -------~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 237 -------MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -------SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -------CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1124667888999999999999999975
No 46
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=290.13 Aligned_cols=249 Identities=20% Similarity=0.243 Sum_probs=187.1
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCC--eeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE--EKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv 257 (435)
..+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357899999999999999999865 48999999997543 334577889999999999999999999998765 67999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------cccccccc
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLARLI 309 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla~~~ 309 (435)
|||+++|+|.+++..... ...+++.....++.|+++||+|||+ |||+++..
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp EECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 999999999999986432 2338999999999999999999995 89998776
Q ss_pred cccCccccccccccCCCcCCcCCC--------CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhc
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQ--------SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMK 381 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 381 (435)
.... ......||+.|+|||++. +..++.++|||||||++|||+||+.||...............+.....
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 167 EDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 5432 223467999999999764 577899999999999999999999998643322222222222221111
Q ss_pred cCCCCcc-------c--ccc--ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhh
Q 040641 382 KQQADDV-------L--DPT--VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEI 433 (435)
Q Consensus 382 ~~~~~~~-------~--~~~--~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i 433 (435)
....... . .+. ............+.+++.+||+.||++|||+.|+++...+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 1100000 0 000 11122345566777899999999999999999999887764
No 47
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.6e-38 Score=289.46 Aligned_cols=237 Identities=21% Similarity=0.320 Sum_probs=173.3
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCC----CCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeC
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPD----GKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFD 251 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 251 (435)
.+.....+|++.+.||+|+||.||+|.... +..||+|.+..... ...+.|.+|+.++++++||||+++++++ ..
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~ 87 (281)
T 1mp8_A 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TE 87 (281)
T ss_dssp CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CS
T ss_pred ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-cc
Confidence 355667889999999999999999998643 45799999875432 3356799999999999999999999998 45
Q ss_pred CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccc
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLAR 307 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~ 307 (435)
+..++||||+++|+|.+++.... ..+++.....++.++++||+|||+ |||+++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred CccEEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccc
Confidence 67899999999999999997542 348899999999999999999996 999998
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
..............+|+.|+|||......++.++|||||||++|||++ |..||..... ......+ ......
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~----~~~~~~i----~~~~~~ 236 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIGRI----ENGERL 236 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG----GGHHHHH----HTTCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH----HHHHHHH----HcCCCC
Confidence 765433333334567889999999888889999999999999999997 8888854321 1222221 111100
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ... .....+.+++.+||+.||++|||+.|+++.|++++
T Consensus 237 ~-----~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 237 P-----MPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp C-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C-----CCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 001 11235678889999999999999999999999875
No 48
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.4e-37 Score=289.57 Aligned_cols=236 Identities=27% Similarity=0.421 Sum_probs=175.8
Q ss_pred ccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhcc--CCCCCceeEEEEEEeC----CeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGK--VKHQNLVLLLGYCSFD----EEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~ 255 (435)
..+|++.+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999988 5889999998643 23455666666655 8999999999987553 4578
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceee--------c------------------------cc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLH--------Q------------------------DF 303 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH--------~------------------------Df 303 (435)
+||||+++|+|.++++.. .+++..+..++.|+++||+||| + ||
T Consensus 83 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred EehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence 999999999999999542 4899999999999999999999 5 99
Q ss_pred cccccccccCccc---cccccccCCCcCCcCCCCC------CCCCcccchhHHHHHHHHHhC----------CCCCCCCc
Q 040641 304 GLARLISACETHV---STDIAGTLGYIPPEYGQSR------MSTTRGDVYSFGVILLELVTA----------KEPTGPEF 364 (435)
Q Consensus 304 Gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~DV~SfGvil~El~tg----------~~p~~~~~ 364 (435)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9998765432221 2335799999999988766 455799999999999999999 77775433
Q ss_pred ccccCCcHHHHHHHHhccCCCCcccccccc-CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhh
Q 040641 365 QEKEGANLVGWVFQKMKKQQADDVLDPTVL-NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEI 433 (435)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i 433 (435)
.... .... .......... .+... ..........+.+++.+||+.||++|||+.||++.|++|
T Consensus 238 ~~~~--~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDP--SFED-MRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSC--CHHH-HHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCc--chhh-hhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2211 1111 1111111111 11111 011224556788999999999999999999999999986
No 49
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=301.59 Aligned_cols=241 Identities=30% Similarity=0.441 Sum_probs=188.1
Q ss_pred cccccccCcceeeeecccCcceEEEEEcC--------CCCEEEEEEcccccc-ccHHHHHHHHHHhccC-CCCCceeEEE
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLP--------DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKV-KHQNLVLLLG 246 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g 246 (435)
.+..+..+|.+.+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +|||||++++
T Consensus 63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 142 (382)
T 3tt0_A 63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG 142 (382)
T ss_dssp TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence 34566788999999999999999999852 235799999975432 3446799999999999 9999999999
Q ss_pred EEEeCCeeEEEEecccCCCHHHHHHhhCCC------------CCCCCHHHHHHHHHHhhhccceeec-------------
Q 040641 247 YCSFDEEKLLVYEYMVNGSLDLWLRNATGS------------HEVLDRAKRYKIACSSARGLAFLHQ------------- 301 (435)
Q Consensus 247 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gl~yLH~------------- 301 (435)
+|..++..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||+
T Consensus 143 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI 222 (382)
T 3tt0_A 143 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 222 (382)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred eeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceE
Confidence 999999999999999999999999865321 2358999999999999999999996
Q ss_pred -----------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCccccc
Q 040641 302 -----------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKE 368 (435)
Q Consensus 302 -----------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~ 368 (435)
|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~---- 298 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---- 298 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----
Confidence 9999987653222 22334567899999999988899999999999999999999 888875321
Q ss_pred CCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 369 GANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
... +...+........ + .. ....+.+++.+||+.||++|||+.||++.|+++.
T Consensus 299 ---~~~-~~~~~~~~~~~~~--~---~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 299 ---VEE-LFKLLKEGHRMDK--P---SN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp ---HHH-HHHHHHTTCCCCC--C---SS----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHH-HHHHHHcCCCCCC--C---cc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 1222222211110 1 11 1235678889999999999999999999999875
No 50
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=318.90 Aligned_cols=238 Identities=27% Similarity=0.412 Sum_probs=187.7
Q ss_pred ccccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..|+.+..+|++.+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++|||||++++++.. +..+
T Consensus 260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence 45677788999999999999999999999888889999997543 345789999999999999999999999865 7789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+|||||++|+|.++++.... ..+++...+.++.|+++||+|||+ |||+++....
T Consensus 338 lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred EeeehhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999999975321 247889999999999999999996 9999987653
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
..........+|..|+|||.+....++.++|||||||++|||+| |+.||..... ..+. ..+..... ...
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~----~~~~----~~i~~~~~--~~~ 485 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVL----DQVERGYR--MPC 485 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH----HHHH----HHHHTTCC--CCC
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHH----HHHHcCCC--CCC
Confidence 22222234567889999999888889999999999999999999 8888753211 1121 22221110 000
Q ss_pred ccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 391 PTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 391 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
+ ..+...+.+++.+||+.||++||||.+|++.|+++.
T Consensus 486 ~-------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 486 P-------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp C-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred C-------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1 112235678899999999999999999999999874
No 51
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-37 Score=289.49 Aligned_cols=240 Identities=25% Similarity=0.406 Sum_probs=178.2
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
.|+....+|.+.+.||+|+||.||+|... ..+|+|.++... ....+.|.+|++++++++||||+++++++. .+..
T Consensus 30 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~ 106 (307)
T 3lb7_A 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNL 106 (307)
T ss_dssp CCBCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred eEEecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcE
Confidence 45667789999999999999999999874 468999886533 234567999999999999999999999875 5668
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++||||+++|+|.+++.... ..+++.....++.|++.||+|||+ |||+++...
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 107 AIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEEEECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEEEecCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 99999999999999997542 358899999999999999999995 999997654
Q ss_pred cc-CccccccccccCCCcCCcCCC---CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 311 AC-ETHVSTDIAGTLGYIPPEYGQ---SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 311 ~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
.. .........||+.|+|||.+. ...++.++|||||||++|||+||+.||...... .. +..........
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~----~~---~~~~~~~~~~~ 256 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR----DQ---IIFMVGRGYAS 256 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HH---HHHHHHHTCCC
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH----HH---HHHHHhcCCCC
Confidence 21 122233467999999999864 567889999999999999999999998543211 11 11111111110
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
... +..... +...+.+++.+||+.+|++||++.||++.|+.+.
T Consensus 257 ~~~-~~~~~~----~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 257 PDL-SKLYKN----CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCS-TTSCSS----SCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred cch-hhhhcC----CcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 000 001111 1235678889999999999999999999998764
No 52
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-37 Score=293.36 Aligned_cols=242 Identities=28% Similarity=0.408 Sum_probs=188.2
Q ss_pred ccccccccCcceeeeecccCcceEEEEEc------CCCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEE
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATL------PDGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYC 248 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 248 (435)
..+..+..+|.+.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|++++++++|||||++++++
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 95 (314)
T 2ivs_A 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC 95 (314)
T ss_dssp TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence 34566778999999999999999999975 235789999997543 33456799999999999999999999999
Q ss_pred EeCCeeEEEEecccCCCHHHHHHhhCC--------------------CCCCCCHHHHHHHHHHhhhccceeec-------
Q 040641 249 SFDEEKLLVYEYMVNGSLDLWLRNATG--------------------SHEVLDRAKRYKIACSSARGLAFLHQ------- 301 (435)
Q Consensus 249 ~~~~~~~lv~ey~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~gl~yLH~------- 301 (435)
...+..++||||+++|+|.+++..... ....+++.....++.|+++||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d 175 (314)
T 2ivs_A 96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD 175 (314)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence 999999999999999999999986432 12347889999999999999999996
Q ss_pred -----------------cccccccccccCcc-ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCC
Q 040641 302 -----------------DFGLARLISACETH-VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGP 362 (435)
Q Consensus 302 -----------------DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~ 362 (435)
|||+++........ ......+|+.|+|||...+..++.++|||||||++|||+| |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999866433221 2234567889999999888889999999999999999999 9999854
Q ss_pred CcccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 363 EFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
... ..+... +....... ... .....+.+++.+||+.||++|||+.||++.|++++
T Consensus 256 ~~~----~~~~~~----~~~~~~~~-----~~~----~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 256 IPP----ERLFNL----LKTGHRME-----RPD----NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp CCG----GGHHHH----HHTTCCCC-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCH----HHHHHH----hhcCCcCC-----CCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 322 122221 21111100 011 11235678889999999999999999999999875
No 53
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6e-37 Score=287.72 Aligned_cols=244 Identities=33% Similarity=0.520 Sum_probs=186.5
Q ss_pred cceeeeecccCcceEEEEEcCCCCEEEEEEccccc----cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 185 LTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK----TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 185 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
+...+.||+|+||.||+|.. +++.||||++.... ....+.|.+|++++++++||||+++++++...+..++||||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 111 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred cccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEe
Confidence 34558999999999999987 57899999986432 22356799999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc-c
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET-H 315 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~-~ 315 (435)
+++|+|.+++..... ...+++..+..++.++++||+|||+ |||+++....... .
T Consensus 112 ~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 190 (307)
T 2nru_A 112 MPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190 (307)
T ss_dssp CTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred cCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence 999999999875422 3458999999999999999999996 8999876543221 2
Q ss_pred ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccC
Q 040641 316 VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLN 395 (435)
Q Consensus 316 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (435)
......||+.|+|||...+ .++.++||||||+++|||+||+.||...........+...... ......+.+++.. .
T Consensus 191 ~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~ 266 (307)
T 2nru_A 191 MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED--EEKTIEDYIDKKM-N 266 (307)
T ss_dssp ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHT--TSCCHHHHSCSSC-S
T ss_pred cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhh--hhhhhhhhccccc-c
Confidence 2234579999999998765 4789999999999999999999998654322211111111100 0111122222222 2
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 396 AGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 396 ~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.........+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 267 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 267 DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 334566677889999999999999999999999999875
No 54
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.7e-37 Score=294.65 Aligned_cols=230 Identities=22% Similarity=0.269 Sum_probs=179.5
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc-----cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK-----TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++|||||++++++...+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46899999999999999999864 68999999986432 1235779999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLI 309 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~ 309 (435)
|||||++|+|.+++.........+++.....++.|+++||+|||+ |||+++..
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999999988886543333458899999999999999999996 89998776
Q ss_pred cccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
.... ......+||+.|+|||++.+..++.++|||||||++|||+||+.||.... ..+ ...+...... .
T Consensus 184 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~----~~~i~~~~~~--~ 251 (351)
T 3c0i_A 184 GESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-----ERL----FEGIIKGKYK--M 251 (351)
T ss_dssp CTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-----HHH----HHHHHHTCCC--C
T ss_pred cCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-----HHH----HHHHHcCCCC--C
Confidence 5422 22345679999999999998899999999999999999999999985421 111 1111111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 NPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Ccccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1100001 1235678889999999999999999974
No 55
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.7e-37 Score=281.89 Aligned_cols=238 Identities=25% Similarity=0.372 Sum_probs=176.7
Q ss_pred cccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeC--Cee
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD--EEK 254 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 254 (435)
.....+|++.+.||+|+||.||+|++. ++.||||.+.... ....+.|.+|+.++++++|||||++++++... +..
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP 84 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSC
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCe
Confidence 345568999999999999999999985 8899999987543 23456799999999999999999999999877 778
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------ccccccccccc------------Cc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------DFGLARLISAC------------ET 314 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------DfGla~~~~~~------------~~ 314 (435)
++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+ |.-...++-.. ..
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 85 TLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEEEECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred EeeecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999999997642 2358999999999999999999996 11111110000 01
Q ss_pred cccccccccCCCcCCcCCCCCCCCC---cccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTT---RGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~---k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
.......||+.|+|||.+.+..++. ++|||||||++|||+||+.||..... ............. +
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~-----~ 230 (271)
T 3kmu_A 163 FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-------MEIGMKVALEGLR-----P 230 (271)
T ss_dssp TSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-------HHHHHHHHHSCCC-----C
T ss_pred ecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-------HHHHHHHHhcCCC-----C
Confidence 1122356899999999887654444 79999999999999999999854221 1111111111111 1
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhhC
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIVD 435 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~~ 435 (435)
..... ....+.+++..||+.||++|||+.++++.|+++.+
T Consensus 231 ~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 231 TIPPG----ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11111 12356788889999999999999999999998864
No 56
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-37 Score=294.35 Aligned_cols=242 Identities=26% Similarity=0.390 Sum_probs=185.4
Q ss_pred cccccccCcceeeeecccCcceEEEEEc------CCCCEEEEEEccccc-cccHHHHHHHHHHhccC-CCCCceeEEEEE
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATL------PDGKTVAVKKFSQAK-TQGHRQFTAEMETLGKV-KHQNLVLLLGYC 248 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~ 248 (435)
.|..+..+|++.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.+++++ +||||+++++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3566778999999999999999999985 235689999997543 23456799999999999 999999999999
Q ss_pred EeCCeeEEEEecccCCCHHHHHHhhCCC-------------------CCCCCHHHHHHHHHHhhhccceeec--------
Q 040641 249 SFDEEKLLVYEYMVNGSLDLWLRNATGS-------------------HEVLDRAKRYKIACSSARGLAFLHQ-------- 301 (435)
Q Consensus 249 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~gl~yLH~-------- 301 (435)
...+..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||+
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di 198 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL 198 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 9999999999999999999999764321 1247899999999999999999996
Q ss_pred ----------------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCC
Q 040641 302 ----------------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPE 363 (435)
Q Consensus 302 ----------------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~ 363 (435)
|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999987654322 22334567889999999888889999999999999999998 99898543
Q ss_pred cccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 364 FQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
... ..+ ...+...... ..+ .. ....+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 279 ~~~---~~~----~~~~~~~~~~--~~~---~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 279 PVD---ANF----YKLIQNGFKM--DQP---FY----ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp CCS---HHH----HHHHHTTCCC--CCC---TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CcH---HHH----HHHHhcCCCC--CCC---CC----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 211 111 1111111100 001 11 1235678899999999999999999999999875
No 57
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.6e-37 Score=289.96 Aligned_cols=242 Identities=28% Similarity=0.441 Sum_probs=188.2
Q ss_pred cccccccCcceeeeecccCcceEEEEEc------CCCCEEEEEEcccccc-ccHHHHHHHHHHhccC-CCCCceeEEEEE
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATL------PDGKTVAVKKFSQAKT-QGHRQFTAEMETLGKV-KHQNLVLLLGYC 248 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~ 248 (435)
.|+.+..+|++.+.||+|+||.||+|++ .+++.||||.+..... ...+.+.+|+++++++ +||||+++++++
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 96 (313)
T 1t46_A 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 96 (313)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE
Confidence 4567778999999999999999999984 3467899999975433 3456799999999999 999999999999
Q ss_pred EeCCeeEEEEecccCCCHHHHHHhhCCC--------------CCCCCHHHHHHHHHHhhhccceeec-------------
Q 040641 249 SFDEEKLLVYEYMVNGSLDLWLRNATGS--------------HEVLDRAKRYKIACSSARGLAFLHQ------------- 301 (435)
Q Consensus 249 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~gl~yLH~------------- 301 (435)
...+..++||||+++|+|.+++...... ...+++.....++.++++||+|||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni 176 (313)
T 1t46_A 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 176 (313)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceE
Confidence 9999999999999999999999865321 1248899999999999999999996
Q ss_pred -----------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCccccc
Q 040641 302 -----------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKE 368 (435)
Q Consensus 302 -----------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~ 368 (435)
|||+++....... .......||+.|+|||...+..++.++|||||||++|||+| |+.||......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 254 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-- 254 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS--
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch--
Confidence 9999987654322 12234567889999999888889999999999999999999 88887543211
Q ss_pred CCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 369 GANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.. .......... ...+ . .....+.+++.+||+.||++|||+.|+++.|++++
T Consensus 255 --~~---~~~~~~~~~~--~~~~---~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 255 --SK---FYKMIKEGFR--MLSP---E----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp --HH---HHHHHHHTCC--CCCC---T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --hH---HHHHhccCCC--CCCc---c----cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 11 1111111100 0001 0 11235678889999999999999999999999875
No 58
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.6e-37 Score=286.65 Aligned_cols=229 Identities=21% Similarity=0.385 Sum_probs=177.5
Q ss_pred ccccCcceeeeecccCcceEEEEEcCC-C-------CEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeC
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLPD-G-------KTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD 251 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 251 (435)
....+|.+.+.||+|+||.||+|+... + ..||+|.+........+.|.+|++++++++|||||++++++..+
T Consensus 5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 345689999999999999999998643 3 46999999776666678899999999999999999999999999
Q ss_pred CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------------
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------------ 301 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------------ 301 (435)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CCCEEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceee
Confidence 99999999999999999997642 348889999999999999999995
Q ss_pred --cccccccccccCccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHH
Q 040641 302 --DFGLARLISACETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQ 378 (435)
Q Consensus 302 --DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~ 378 (435)
|||+++.... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.|+..... .... ..
T Consensus 162 l~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~------~~~~-~~ 229 (289)
T 4fvq_A 162 LSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD------SQRK-LQ 229 (289)
T ss_dssp ECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHH-HH
T ss_pred eccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc------hHHH-HH
Confidence 5555543221 123458899999998877 6789999999999999999997666543221 1111 11
Q ss_pred HhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 379 KMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
...... . ..+. .. ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 230 ~~~~~~--~-~~~~-~~-------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 230 FYEDRH--Q-LPAP-KA-------AELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp HHHTTC--C-CCCC-SS-------CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred HhhccC--C-CCCC-CC-------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 111110 0 0000 11 13567888999999999999999999999875
No 59
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.3e-36 Score=291.24 Aligned_cols=227 Identities=21% Similarity=0.263 Sum_probs=178.5
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccc------cHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQ------GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
...|++.+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|+.++++++|||||++++++...+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 356899999999999999999865 5899999998654321 346799999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------ccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLA 306 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla 306 (435)
++||||+++|+|.+++... ..+++.....++.|++.||+|||+ |||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC----SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999653 358899999999999999999995 88888
Q ss_pred ccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 307 RLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
+..... ......+||+.|+|||++.+..++.++|||||||++|||++|..||..... ... ...+......
T Consensus 167 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~----~~~----~~~i~~~~~~ 236 (361)
T 2yab_A 167 HEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QET----LANITAVSYD 236 (361)
T ss_dssp EECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHH----HHHHHTTCCC
T ss_pred eEcCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH----HHH----HHHHHhcCCC
Confidence 765432 223456799999999999988999999999999999999999999854321 111 1112111110
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.++..... ....+.+++.+||..||++|||+.|+++
T Consensus 237 --~~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 --FDEEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --CCchhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111011 1124667889999999999999999874
No 60
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=313.32 Aligned_cols=233 Identities=22% Similarity=0.349 Sum_probs=176.2
Q ss_pred cccCcceee-eecccCcceEEEEEcC---CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 181 PLLKLTLVD-ILEDGGFGTVYKATLP---DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 181 ~~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
...++.+.+ .||+|+||.||+|.+. ++..||||.++.... ...++|.+|+++|++++|||||+++|+|.. +..+
T Consensus 333 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 333 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp CTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred cccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence 344555555 7999999999999764 456799999976432 356789999999999999999999999976 5689
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+|||||++|+|.+++... ...+++..+..++.|+++||+|||+ |||+++.+..
T Consensus 412 lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EEEECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEEEeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999999999653 2358999999999999999999996 9999987643
Q ss_pred cCccc--cccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 312 CETHV--STDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 312 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
..... .....+|+.|+|||++....++.++|||||||++|||+| |+.||.... ...+.. .+.......
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~----~~~~~~----~i~~~~~~~- 559 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK----GPEVMA----FIEQGKRME- 559 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----SHHHHH----HHHTTCCCC-
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC----HHHHHH----HHHcCCCCC-
Confidence 32211 122346789999999988889999999999999999998 999985432 112222 222211100
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.| . .+...+.+++.+||+.||++||+|.+|++.|+++.
T Consensus 560 -~p---~----~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 560 -CP---P----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp -CC---T----TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CC---C----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 01 1 12235778999999999999999999999998763
No 61
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.1e-37 Score=285.47 Aligned_cols=238 Identities=23% Similarity=0.369 Sum_probs=189.3
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCC-CCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPD-GKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
.|+....+|++.+.||+|+||.||+|.... ++.||+|.+.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 456667889999999999999999998754 7889999986533 34577999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|.+++.... ...+++..+..++.+++.||+|||+ |||+++....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EEEECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEEEcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 9999999999999997642 3458899999999999999999996 9999987654
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
..........+|+.|+|||...+..++.++||||||+++|||++ |..||.... .......+. ..... ..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~----~~~~~~~~~----~~~~~--~~ 233 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELLE----KDYRM--ER 233 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----GGGHHHHHH----TTCCC--CC
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHh----ccCCC--CC
Confidence 44334445667889999999888889999999999999999999 888875321 112222211 11000 00
Q ss_pred ccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 391 PTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 391 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
+ . .....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 234 ~---~----~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 234 P---E----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp C---T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---C----CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 1 1 11235678889999999999999999999998864
No 62
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.5e-37 Score=292.15 Aligned_cols=241 Identities=30% Similarity=0.435 Sum_probs=185.7
Q ss_pred cccccccCcceeeeecccCcceEEEEEcC--------CCCEEEEEEcccccc-ccHHHHHHHHHHhccC-CCCCceeEEE
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLP--------DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKV-KHQNLVLLLG 246 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g 246 (435)
.|..+..+|++.+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+++++++ +||||+++++
T Consensus 29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 108 (334)
T 2pvf_A 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 108 (334)
T ss_dssp TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEE
Confidence 45667789999999999999999999853 467899999975432 3456789999999999 8999999999
Q ss_pred EEEeCCeeEEEEecccCCCHHHHHHhhCCC------------CCCCCHHHHHHHHHHhhhccceeec-------------
Q 040641 247 YCSFDEEKLLVYEYMVNGSLDLWLRNATGS------------HEVLDRAKRYKIACSSARGLAFLHQ------------- 301 (435)
Q Consensus 247 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gl~yLH~------------- 301 (435)
+|...+..++||||+++|+|.+++...... ...+++..+..++.++++||+|||+
T Consensus 109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI 188 (334)
T 2pvf_A 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188 (334)
T ss_dssp EECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred EEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceE
Confidence 999999999999999999999999864321 1348889999999999999999996
Q ss_pred -----------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCccccc
Q 040641 302 -----------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKE 368 (435)
Q Consensus 302 -----------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~ 368 (435)
|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 265 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 265 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH---
Confidence 8999886653322 12233467889999999888889999999999999999999 8888753211
Q ss_pred CCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 369 GANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+ ...+....... ... .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 266 -~~~----~~~~~~~~~~~-----~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 266 -EEL----FKLLKEGHRMD-----KPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp -HHH----HHHHHHTCCCC-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHH----HHHHhcCCCCC-----CCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111 12221111110 011 11235678889999999999999999999999875
No 63
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=294.19 Aligned_cols=228 Identities=18% Similarity=0.275 Sum_probs=180.4
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
...|++.+.||+|+||.||+|... +++.||+|.+..........+.+|++++++++|||||++++++......++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357899999999999999999865 5889999999765544556789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------cccccccccccCc
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------------DFGLARLISACET 314 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------DfGla~~~~~~~~ 314 (435)
+++|+|.+++... ...+++.....++.|++.||+|||+ |||+++......
T Consensus 130 ~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999988643 2348899999999999999999995 899988765422
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .... ..+...... .++...
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~----~~~~----~~i~~~~~~--~~~~~~ 274 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD----LETL----QNVKRCDWE--FDEDAF 274 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHH----HHHHHCCCC--CCSSTT
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH----HHHH----HHHHhCCCC--CCcccc
Confidence 22345799999999999998999999999999999999999999854321 1111 111111110 111111
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .....+.+++.+||+.||++|||+.|+++
T Consensus 275 ~----~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 275 S----SVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred c----cCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1 11235678899999999999999999985
No 64
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-36 Score=282.32 Aligned_cols=234 Identities=21% Similarity=0.296 Sum_probs=172.8
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccc---cHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQ---GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|.+.+.||+|+||.||+|+.. +++.||+|.+...... ..+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999865 6889999999754322 246789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++++|.+++.... .+++.....++.++++||+|||+ |||+++......
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999997642 48899999999999999999996 899887655433
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
........||+.|+|||...+..++.++||||||+++|||+||+.||..... ......+...... +..
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~----~~~ 256 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL--------SVMGAHINQAIPR----PST 256 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--------HHHHHHHHSCCCC----GGG
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--------HHHHHHhccCCCC----ccc
Confidence 2333456799999999999988999999999999999999999999854211 1112222211110 100
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCC-CHHHHHHHHhhhh
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRP-TMLHVLKLLHEIV 434 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RP-s~~evl~~L~~i~ 434 (435)
..+. ....+.+++.+||+.||++|| ++.++++.|++++
T Consensus 257 ~~~~---~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 257 VRPG---IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp TSTT---CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred cCCC---CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 0111 112466788999999999999 9999999998765
No 65
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5.5e-37 Score=290.17 Aligned_cols=241 Identities=22% Similarity=0.342 Sum_probs=170.8
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCCC----CEEEEEEcccc--ccccHHHHHHHHHHhccCCCCCceeEEEEEEe
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPDG----KTVAVKKFSQA--KTQGHRQFTAEMETLGKVKHQNLVLLLGYCSF 250 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 250 (435)
.+..+..+|++.+.||+|+||.||+|+.... ..||||.++.. .....+.|.+|++++++++|||||++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 3455667899999999999999999987543 27999999754 23345789999999999999999999999987
Q ss_pred CCee------EEEEecccCCCHHHHHHhhCC--CCCCCCHHHHHHHHHHhhhccceeec---------------------
Q 040641 251 DEEK------LLVYEYMVNGSLDLWLRNATG--SHEVLDRAKRYKIACSSARGLAFLHQ--------------------- 301 (435)
Q Consensus 251 ~~~~------~lv~ey~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------- 301 (435)
.... ++||||+++|+|.+++..... ....+++..+..++.|+++||+|||+
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCE
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCE
Confidence 7665 999999999999999875432 22358899999999999999999996
Q ss_pred ---cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHH
Q 040641 302 ---DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWV 376 (435)
Q Consensus 302 ---DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~ 376 (435)
|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||..... ......+
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~----~~~~~~~ 252 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN----AEIYNYL 252 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG----GGHHHHH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh----HHHHHHH
Confidence 9999987643322 22233457889999999888889999999999999999999 8888754321 2222221
Q ss_pred HHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 377 FQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ...... .+ ......+.+++.+||+.||++|||+.++++.|++++
T Consensus 253 ~----~~~~~~--~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 253 I----GGNRLK--QP-------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp H----TTCCCC--CC-------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred h----cCCCCC--CC-------CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 111000 00 111235778899999999999999999999999875
No 66
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.6e-37 Score=282.14 Aligned_cols=229 Identities=28% Similarity=0.438 Sum_probs=168.8
Q ss_pred ccccCcceeeeecccCcceEEEEEcCCCCEEEEEEcccccc----ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKT----QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
....+|++.+.||+|+||.||+|.+. ++.||||.+..... ...+.+.+|+++++.++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (271)
T 3dtc_A 4 IDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC 82 (271)
T ss_dssp CCTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CE
T ss_pred cchhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence 34568999999999999999999975 78999999865432 23467899999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------------
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------------- 301 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------------- 301 (435)
+||||+++|+|.+++.. ..+++.....++.++++||+|||+
T Consensus 83 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl 157 (271)
T 3dtc_A 83 LVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157 (271)
T ss_dssp EEEECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred EEEEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence 99999999999999853 248889999999999999999874
Q ss_pred -cccccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHh
Q 040641 302 -DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKM 380 (435)
Q Consensus 302 -DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~ 380 (435)
|||+++..... ......||+.|+|||...+..++.++||||||+++|||+||+.||..... ........
T Consensus 158 ~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~ 227 (271)
T 3dtc_A 158 TDFGLAREWHRT---TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-------LAVAYGVA 227 (271)
T ss_dssp CCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH-------HHHHHHHH
T ss_pred ccCCcccccccc---cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHhhh
Confidence 56665543321 12235789999999998888899999999999999999999999854211 11111111
Q ss_pred ccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhh
Q 040641 381 KKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEI 433 (435)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i 433 (435)
... .. ...... ....+.+++.+||+.||++|||+.|+++.|++|
T Consensus 228 ~~~-~~----~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 228 MNK-LA----LPIPST----CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TSC-CC----CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cCC-CC----CCCCcc----cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111 10 011111 123567889999999999999999999999875
No 67
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=291.14 Aligned_cols=244 Identities=21% Similarity=0.283 Sum_probs=183.0
Q ss_pred ccccccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEe----
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSF---- 250 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~---- 250 (435)
.++.....+|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++..
T Consensus 22 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (317)
T 2buj_A 22 HMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA 101 (317)
T ss_dssp EEEEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred cEEEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence 34455667899999999999999999986 5689999999876555566789999999999999999999999873
Q ss_pred CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccc
Q 040641 251 DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLA 306 (435)
Q Consensus 251 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla 306 (435)
....++||||+++|+|.+++.........+++..+..++.|+++||+|||+ |||++
T Consensus 102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 347889999999999999998754444568999999999999999999996 88887
Q ss_pred ccccccCc--------cccccccccCCCcCCcCCCCCC---CCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHH
Q 040641 307 RLISACET--------HVSTDIAGTLGYIPPEYGQSRM---STTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGW 375 (435)
Q Consensus 307 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~---~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~ 375 (435)
+....... .......||+.|+|||.+.... ++.++|||||||++|||++|+.||...... .......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~ 259 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK--GDSVALA 259 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT--TSCHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc--cchhhHH
Confidence 65432110 0112345799999999887554 688999999999999999999998432111 1111111
Q ss_pred HHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 376 VFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.. .. . .. +. .......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 260 ~~----~~-~-~~--~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 260 VQ----NQ-L-SI--PQ-----SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HH----CC----C--CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred hh----cc-C-CC--Cc-----cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 11 10 0 00 00 0011235778889999999999999999999998864
No 68
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-37 Score=287.89 Aligned_cols=230 Identities=26% Similarity=0.446 Sum_probs=172.5
Q ss_pred ccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
....+|++.+.||+|+||.||+|++. ++.||||++... ...+.|.+|++++++++|||||+++|++. +..++|||
T Consensus 5 i~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e 79 (307)
T 2eva_A 5 IDYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVME 79 (307)
T ss_dssp CCGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEE
T ss_pred CCHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEE
Confidence 34568899999999999999999875 788999999643 34567999999999999999999999876 45899999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------cccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLARLISA 311 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla~~~~~ 311 (435)
|+++|+|.+++.... ....+++...+.++.++++||+|||+ |||+++....
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 80 YAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred cCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 999999999997542 22347888899999999999999985 6777654432
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
. .....||+.|+|||+..+..++.++|||||||++|||+||+.||..... .......... .... +
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~-~~~~-----~ 223 (307)
T 2eva_A 159 H----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG-----PAFRIMWAVH-NGTR-----P 223 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS-----SHHHHHHHHH-TTCC-----C
T ss_pred c----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc-----cHHHHHHHHh-cCCC-----C
Confidence 1 2234699999999999988999999999999999999999999854211 1111111111 1111 1
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..... ....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 224 ~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 224 PLIKN----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp CCBTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred Ccccc----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 11111 1134678889999999999999999999998864
No 69
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.1e-36 Score=285.17 Aligned_cols=224 Identities=20% Similarity=0.276 Sum_probs=178.2
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccc---ccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQA---KTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|++.+.||+|+||.||+|+.. +|+.||+|.++.. .......+.+|+++++.++|||||++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357899999999999999999865 5899999999654 233456789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|..++.... .+++.....++.+++.||+|||+ |||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 99999999999987642 47888999999999999999996 99999764322
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+ ...+..... .-|.
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~----~~~i~~~~~---~~p~- 226 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----ERL----FELILMEEI---RFPR- 226 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHCCC---CCCT-
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH----HHH----HHHHHcCCC---CCCC-
Confidence 2233457899999999999999999999999999999999999999854221 111 111111111 0111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRP-----TMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----s~~evl~ 428 (435)
. ....+.+++.+||+.||++|| ++.||++
T Consensus 227 --~----~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 227 --T----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp --T----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --C----CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1 112466788899999999999 8998864
No 70
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-36 Score=285.78 Aligned_cols=239 Identities=21% Similarity=0.342 Sum_probs=174.0
Q ss_pred cccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 345799999999999999999985 468999999986432 2345678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|.+++.........+++.....++.++++||+|||+ |||+++.....
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 999999999999987543334568899999999999999999996 89988765432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
. .......||+.|+|||...+..++.++||||||+++|||++|+.||.... ....... ..+.......
T Consensus 190 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~-~~~~~~~~~~----- 257 (310)
T 2wqm_A 190 T-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-----MNLYSLC-KKIEQCDYPP----- 257 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCHHHHH-HHHHTTCSCC-----
T ss_pred C-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc-----hhHHHHH-HHhhcccCCC-----
Confidence 1 22234578999999999988899999999999999999999999985421 1111111 1222111111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.... .....+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 258 ~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 258 LPSD---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp CCTT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Cccc---ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1101 11235678889999999999999999999999874
No 71
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=7.2e-37 Score=289.86 Aligned_cols=232 Identities=23% Similarity=0.389 Sum_probs=174.4
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCC----EEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGK----TVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..+|++.+.||+|+||.||+|++. +++ .||+|.+.... ....+.|.+|+.++++++|||||+++++|... ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeE
Confidence 457899999999999999999854 344 46888886433 34557899999999999999999999999875 478
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|.+++.... ..+++..++.++.++++||+|||+ |||+++....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 9999999999999997643 348899999999999999999996 9999987654
Q ss_pred cCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 312 CET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 312 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+...+ ..... ..
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~~----~~~~~--~~ 239 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----SEISSIL----EKGER--LP 239 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG----GGHHHHH----HTTCC--CC
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH----HHHHHHH----HcCCC--CC
Confidence 322 22234567889999999988899999999999999999999 9999854321 1222211 11110 00
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.+ ......+.+++.+||+.||++|||+.||++.|+++.
T Consensus 240 ~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 240 QP-------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp CC-------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred CC-------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 11 111235778899999999999999999999998764
No 72
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-37 Score=292.07 Aligned_cols=235 Identities=28% Similarity=0.395 Sum_probs=165.5
Q ss_pred cCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhcc--CCCCCceeEEEEEEeCC----eeEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGK--VKHQNLVLLLGYCSFDE----EKLL 256 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~l 256 (435)
.+|++.+.||+|+||.||+|++. ++.||||.++.. ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 46889999999999999999875 889999998643 34567788888877 79999999999998876 7899
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceee--------c------------------------ccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLH--------Q------------------------DFG 304 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH--------~------------------------DfG 304 (435)
||||+++|+|.+++... .+++.....++.+++.||+||| + |||
T Consensus 79 v~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecC
Confidence 99999999999999653 3677788899999999999999 4 999
Q ss_pred ccccccccCcc---ccccccccCCCcCCcCCCCC------CCCCcccchhHHHHHHHHHhC----------CCCCCCCcc
Q 040641 305 LARLISACETH---VSTDIAGTLGYIPPEYGQSR------MSTTRGDVYSFGVILLELVTA----------KEPTGPEFQ 365 (435)
Q Consensus 305 la~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~SfGvil~El~tg----------~~p~~~~~~ 365 (435)
+++........ ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 99765443221 12334799999999987765 344689999999999999999 556543222
Q ss_pred cccC-CcHHHHHHHHhccCCCCccccccccC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 366 EKEG-ANLVGWVFQKMKKQQADDVLDPTVLN-AGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 366 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.... ..... ...... ..+.... .........+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 234 ~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 234 SDPSVEEMRK----VVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp -CCCCC-CHH----HHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred CCccHHHHHH----HHHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 1111 11111 111111 1111110 112355667889999999999999999999999999875
No 73
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.9e-37 Score=285.83 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=182.4
Q ss_pred cccCcceeeeecccCcceEEEEEc-----CCCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeC--C
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-----PDGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD--E 252 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~ 252 (435)
....|++.+.||+|+||.||+|++ .+++.||||.+.... ....+.+.+|++++++++||||+++++++... .
T Consensus 19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 446789999999999999999983 357899999997543 33457899999999999999999999999876 6
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+ |||+++.
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred eEEEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 6899999999999999996543 348899999999999999999996 9999987
Q ss_pred ccccCc--cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-------ccCCcHHHHHHHH
Q 040641 309 ISACET--HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQE-------KEGANLVGWVFQK 379 (435)
Q Consensus 309 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~-------~~~~~~~~~~~~~ 379 (435)
...... .......||..|+|||.+.+..++.++||||||+++|||+||+.|+...... .............
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 654322 2233457888999999988888899999999999999999999885432100 0011111111111
Q ss_pred hccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhhC
Q 040641 380 MKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIVD 435 (435)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~~ 435 (435)
+....... . .......+.+++.+||+.||++|||+.++++.|+++++
T Consensus 256 ~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 256 LKEGKRLP-----C----PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHTTCCCC-----C----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HhccCCCC-----C----CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 21111000 0 01122357788999999999999999999999999863
No 74
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.2e-37 Score=285.56 Aligned_cols=237 Identities=29% Similarity=0.433 Sum_probs=185.7
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
.|+.+..+|++.+.||+|+||.||+|...+++.||||.+.... ...+.|.+|++++++++||||+++++++. .+..++
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 84 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI 84 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence 4666778999999999999999999998888899999986543 34578999999999999999999999986 456899
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|.+++.... ...+++.....++.++++||+|||+ |||+++.....
T Consensus 85 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp EEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 999999999999986432 1248889999999999999999996 89998876543
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
.........+|+.|+|||...+..++.++||||||+++|||+| |+.||..... ... ...+..... ...+
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~----~~~~~~~~~--~~~~ 232 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN----PEV----IQNLERGYR--MVRP 232 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHH----HHHHHTTCC--CCCC
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH----HHH----HHHHhcccC--CCCc
Confidence 3333344567889999999887888999999999999999999 8888753211 111 112211110 0111
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. .....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 233 ~-------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 233 D-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp T-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred c-------cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1 11235678889999999999999999999998864
No 75
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-36 Score=287.82 Aligned_cols=227 Identities=18% Similarity=0.271 Sum_probs=178.2
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
..+|++.+.||+|+||.||+|+.. +++.||+|.+.... .....+.+|+++++.++|||||++++++...+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 357899999999999999999865 57899999986433 3345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------cccccccccccCc
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------------DFGLARLISACET 314 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------DfGla~~~~~~~~ 314 (435)
|++|+|.+++... ...+++.....++.|+++||+|||+ |||+++......
T Consensus 83 ~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999998643 2358899999999999999999995 899887764322
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
......||+.|+|||+..+..++.++|||||||++|||++|+.||..... .... ..+...... .++...
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~----~~i~~~~~~--~~~~~~ 227 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN----QQII----ENIMNAEYT--FDEEAF 227 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHH----HHHHHTCCC--CCHHHH
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH----HHHH----HHHHcCCCC--CChhhh
Confidence 23346799999999999888899999999999999999999999854321 1111 111111110 000000
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .....+.+++.+||+.||++|||+.|+++
T Consensus 228 ~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 228 K----EISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 11235678899999999999999999986
No 76
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=298.05 Aligned_cols=248 Identities=20% Similarity=0.263 Sum_probs=187.5
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCC--eeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE--EKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv 257 (435)
..+|.+.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357899999999999999999875 48999999997543 234567889999999999999999999998765 67999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------cccccccc
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLARLI 309 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla~~~ 309 (435)
|||+++|+|.+++..... ...+++.....++.+++.||+|||+ |||+++..
T Consensus 88 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp ECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred EecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 999999999999976432 2238999999999999999999995 89998776
Q ss_pred cccCccccccccccCCCcCCcCCCC--------CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhc
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQS--------RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMK 381 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 381 (435)
.... ......||+.|+|||++.. ..++.++|||||||++|||+||+.||............ +.....
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~---~~~~~~ 241 (396)
T 4eut_A 167 EDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV---MYKIIT 241 (396)
T ss_dssp CCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHH---HHHHHH
T ss_pred cCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHH---HHHHhc
Confidence 4322 2234679999999998654 46788999999999999999999998643322222122 222222
Q ss_pred cCCCCc---c---------cccc--ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhhC
Q 040641 382 KQQADD---V---------LDPT--VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIVD 435 (435)
Q Consensus 382 ~~~~~~---~---------~~~~--~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~~ 435 (435)
...... . .... ............+.+++.+||+.||++||++.|+++.++++++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 111100 0 0000 1112234556667789999999999999999999999988763
No 77
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.1e-36 Score=286.44 Aligned_cols=241 Identities=22% Similarity=0.281 Sum_probs=178.0
Q ss_pred cccccCcceeeeecccCcceEEEEEcCCCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
+.-..+|++.+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++|||||++++++..++..++
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 444578999999999999999999988899999999865432 234678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++ +|.+++.... ..+++.....++.|+++||+|||+ |||+++.....
T Consensus 97 v~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEECCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEcCCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9999985 7877776532 348889999999999999999996 99999875432
Q ss_pred CccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
........||+.|+|||++.+ ..++.++||||+||++|||+||+.||..... ......+...............
T Consensus 173 -~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~ 247 (311)
T 3niz_A 173 -VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD----DDQLPKIFSILGTPNPREWPQV 247 (311)
T ss_dssp -CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST----TTHHHHHHHHHCCCCTTTSGGG
T ss_pred -cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHHCCCChHHhhhh
Confidence 222344678999999998765 5689999999999999999999999864322 2223333332222111100000
Q ss_pred -----------cccCCCC-----HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 392 -----------TVLNAGS-----KPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 392 -----------~~~~~~~-----~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
....... .....++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 011235678899999999999999999986
No 78
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9.6e-37 Score=282.68 Aligned_cols=235 Identities=22% Similarity=0.319 Sum_probs=178.7
Q ss_pred cccccCcceeeeecccCcceEEEEEcCC----CCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPD----GKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE 253 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 253 (435)
.....+|++.+.||+|+||.||+|++.+ +..||||.+.... ....+.|.+|++++++++||||+++++++.. +.
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 4456789999999999999999998532 3469999997543 2345679999999999999999999999764 56
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.++||||+++|+|.+++.... ..+++.....++.++++||+|||+ |||+++..
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred CEEEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 789999999999999997643 347889999999999999999996 89998876
Q ss_pred cccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
............+|+.|+|||...+..++.++||||||+++|||+| |+.||..... ......+.. ....
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~----~~~~~~~~~----~~~~-- 233 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN----KDVIGVLEK----GDRL-- 233 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG----GGHHHHHHH----TCCC--
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh----HHHHHHHhc----CCCC--
Confidence 5433333344567889999999888889999999999999999998 9999853221 122222111 1100
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+. . ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 234 ~~~~---~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 234 PKPD---L----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp CCCT---T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC---C----CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 0111 1 1134678889999999999999999999999874
No 79
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=292.78 Aligned_cols=225 Identities=22% Similarity=0.280 Sum_probs=171.7
Q ss_pred cceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEecccC
Q 040641 185 LTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEYMVN 263 (435)
Q Consensus 185 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 263 (435)
+...+.||+|+||.||+|+. .+|+.||+|.++.......+.|.+|++++++++|||||++++++...+..++||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 34467899999999999986 46899999999765555567899999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------cccccccccccCcccc
Q 040641 264 GSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------------DFGLARLISACETHVS 317 (435)
Q Consensus 264 g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------DfGla~~~~~~~~~~~ 317 (435)
|+|.+++.... ..+++..+..++.|+++||+|||+ |||+++...... ..
T Consensus 171 ~~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~ 245 (373)
T 2x4f_A 171 GELFDRIIDES---YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KL 245 (373)
T ss_dssp CEEHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BC
T ss_pred CcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cc
Confidence 99998887532 348899999999999999999996 899988764322 22
Q ss_pred ccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCC
Q 040641 318 TDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAG 397 (435)
Q Consensus 318 ~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (435)
....||+.|+|||++....++.++|||||||++|||+||+.||..... .... ....... .. ..+....
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~~~~---~~i~~~~-~~--~~~~~~~-- 313 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND----AETL---NNILACR-WD--LEDEEFQ-- 313 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHH---HHHHHTC-CC--SCSGGGT--
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH----HHHH---HHHHhcc-CC--CChhhhc--
Confidence 345799999999999888899999999999999999999999854321 1111 1111111 00 0000001
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 398 SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 398 ~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.....+.+++.+||+.||++|||+.|+++
T Consensus 314 --~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 314 --DISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11235678899999999999999999986
No 80
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=286.68 Aligned_cols=226 Identities=20% Similarity=0.276 Sum_probs=177.0
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc------ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT------QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..|++.+.||+|+||.||+|+.. +|+.||||.+..... ...+.+.+|+.++++++|||||++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46889999999999999999865 589999999865332 13567999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------cccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLAR 307 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla~ 307 (435)
+||||+++|+|.+++... ..+++.....++.|++.||+|||+ |||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTS----SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 999999999999998643 358899999999999999999995 888887
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .... ..+......
T Consensus 167 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~----~~~~~~~~~- 235 (326)
T 2y0a_A 167 KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QETL----ANVSAVNYE- 235 (326)
T ss_dssp ECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHH----HHHHHTCCC-
T ss_pred ECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH----HHHH----HHHHhcCCC-
Confidence 654322 22346799999999999888999999999999999999999999854321 1111 111111100
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 236 -~~~~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 -FEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -CCHHHHTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -cCcccccc----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000001 1124667889999999999999999985
No 81
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.9e-36 Score=281.89 Aligned_cols=240 Identities=28% Similarity=0.441 Sum_probs=172.7
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
.++.+..+|++.+.||+|+||.||+|+.. ..||||.++... ....+.|.+|++++++++||||+++++++ ..+..
T Consensus 18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~ 94 (289)
T 3og7_A 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQL 94 (289)
T ss_dssp CCBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSC
T ss_pred CCccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCcc
Confidence 34667789999999999999999999874 369999986543 23456799999999999999999999975 55678
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++||||+++|+|.+++... ...+++.....++.+++.||+|||+ |||+++...
T Consensus 95 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 95 AIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEEEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccc
Confidence 9999999999999998643 2358899999999999999999996 899987654
Q ss_pred ccC-ccccccccccCCCcCCcCCC---CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 311 ACE-THVSTDIAGTLGYIPPEYGQ---SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 311 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
... ........||+.|+|||.+. ...++.++||||||+++|||+||+.||...... ..+..........
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~ 244 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-------DQIIEMVGRGSLS 244 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-------HHHHHHHHHTSCC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcccccC
Confidence 311 22233467999999999875 567888999999999999999999998543211 1111222111111
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.... ... ......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 245 ~~~~-~~~----~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 245 PDLS-KVR----SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCTT-SSC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cchh-hcc----ccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1000 001 112235778899999999999999999999999875
No 82
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.7e-36 Score=291.02 Aligned_cols=226 Identities=23% Similarity=0.295 Sum_probs=178.2
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++|||||++++++...+..++|||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 47899999999999999999865 58999999996543 2344678999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISAC 312 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~ 312 (435)
|+++|+|.+++... ..+++.....++.|+++||+|||+ |||+++.....
T Consensus 109 ~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 109 LVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred cCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 99999999888643 348899999999999999999996 89998766532
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......+||+.|+|||++.+..++.++|||||||++|||+||+.||..... ..+ ...+...... ...+.
T Consensus 185 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~----~~~----~~~i~~~~~~-~~~~~ 253 (362)
T 2bdw_A 185 --EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRL----YAQIKAGAYD-YPSPE 253 (362)
T ss_dssp --CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHTCCC-CCTTG
T ss_pred --cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHH----HHHHHhCCCC-CCccc
Confidence 223356899999999999988999999999999999999999999854321 111 1222111110 00110
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.......+.+++.+||+.||++|||+.|+++
T Consensus 254 -----~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 254 -----WDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp -----GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----ccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0111235678889999999999999999874
No 83
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.5e-36 Score=279.74 Aligned_cols=230 Identities=22% Similarity=0.375 Sum_probs=174.1
Q ss_pred cccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccc-------cHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQ-------GHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
...+|++.+.||+|+||.||+|+. .+++.||||.+...... ..+.|.+|++++++++||||+++++++....
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 346899999999999999999986 46889999998643321 1267899999999999999999999986544
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------------
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------------- 301 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------------- 301 (435)
++||||+++|+|.+++... ...+++..+..++.+++.||+|||+
T Consensus 97 --~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred --eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 7999999999999888654 2358999999999999999998885
Q ss_pred cccccccccccCccccccccccCCCcCCcCC--CCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHH
Q 040641 302 DFGLARLISACETHVSTDIAGTLGYIPPEYG--QSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQK 379 (435)
Q Consensus 302 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~ 379 (435)
|||+++.... ......||+.|+|||++ ....++.++|||||||++|||++|+.||...... ........
T Consensus 172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~ 242 (287)
T 4f0f_A 172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFINMI 242 (287)
T ss_dssp CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHHHH
T ss_pred CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHHHH
Confidence 6666653321 22346799999999988 4456789999999999999999999998543211 11111111
Q ss_pred hccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhh
Q 040641 380 MKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEI 433 (435)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i 433 (435)
.. .... +.... .....+.+++.+||+.||++|||+.||++.|+++
T Consensus 243 ~~-~~~~----~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 RE-EGLR----PTIPE----DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HH-SCCC----CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hc-cCCC----CCCCc----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11 1111 11111 1123567888999999999999999999999875
No 84
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-36 Score=286.25 Aligned_cols=222 Identities=19% Similarity=0.313 Sum_probs=175.3
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|.+.+.||+|+||.||+|+. .+++.||||.+.... ......+.+|+++++.++|||||++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999986 568999999986432 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+ +|+|.+++.... .+++.....++.|++.||+|||+ |||+++.....
T Consensus 88 ~E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~- 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG- 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred EECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence 9999 789988887643 48899999999999999999996 99999876542
Q ss_pred ccccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......+||+.|+|||.+.+..+ +.++|||||||++|||++|+.||......... ..+.. .....|.
T Consensus 162 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~--------~~i~~---~~~~~p~ 229 (336)
T 3h4j_B 162 -NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF--------KKVNS---CVYVMPD 229 (336)
T ss_dssp -BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB--------CCCCS---SCCCCCT
T ss_pred -cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH--------HHHHc---CCCCCcc
Confidence 22345689999999999988765 78999999999999999999998653321110 00000 0001111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 230 ~-------~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 230 F-------LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp T-------SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred c-------CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1 1234668899999999999999999874
No 85
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=295.63 Aligned_cols=227 Identities=24% Similarity=0.296 Sum_probs=177.7
Q ss_pred cCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 5789999999999999999985 468899999986543 2344678999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISAC 312 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~ 312 (435)
||++|+|.+++... ..+++.....++.|+++||+|||+ |||+++.....
T Consensus 91 ~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 91 LVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred eCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 99999999988764 248899999999999999999995 89999776542
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+ ...+..... ....+.
T Consensus 167 ~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~----~~~----~~~i~~~~~-~~~~~~ 236 (444)
T 3soa_A 167 Q-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRL----YQQIKAGAY-DFPSPE 236 (444)
T ss_dssp C-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHH----HHHHHHTCC-CCCTTT
T ss_pred C-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH----HHH----HHHHHhCCC-CCCccc
Confidence 2 223456899999999999998999999999999999999999999854321 111 222222111 111111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ......+.+++.+||+.||++|||+.|+++
T Consensus 237 ~-----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 237 W-----DTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp T-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred c-----ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1 111235678889999999999999999985
No 86
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.9e-36 Score=290.59 Aligned_cols=229 Identities=18% Similarity=0.214 Sum_probs=168.1
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
...+|++.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++++++|||||++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3468999999999999999999865 688999999965432 33678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------cccccccccccC
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------------DFGLARLISACE 313 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------DfGla~~~~~~~ 313 (435)
|+++|+|.+++.... .+++.....++.|+++||+|||+ |||+++.....
T Consensus 97 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 97 YASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 999999999987643 38899999999999999999995 88888743321
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCc-ccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTR-GDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k-~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...... ............ .... ..+.
T Consensus 172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~~~~~-~~~~-~~~~- 244 (361)
T 3uc3_A 172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP---RDYRKTIQRILS-VKYS-IPDD- 244 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C---CCHHHHHHHHHT-TCCC-CCTT-
T ss_pred -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH---HHHHHHHHHHhc-CCCC-CCCc-
Confidence 22234579999999999877776655 89999999999999999998643221 112222221111 1110 0000
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .....+.+++.+||+.||++|||+.|+++
T Consensus 245 ---~---~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 245 ---I---RISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp ---S---CCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ---C---CCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 0 01135678899999999999999999975
No 87
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.8e-36 Score=280.59 Aligned_cols=237 Identities=24% Similarity=0.283 Sum_probs=173.1
Q ss_pred cCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
.+|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++|||||++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4788999999999999999998789999999986433 22346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCccc
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACETHV 316 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~~~ 316 (435)
+++ +|.+++.... ..+++.....++.|+++||+|||+ |||+++..... ...
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-VRK 156 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc-ccc
Confidence 985 8988887532 347888999999999999999996 89998765432 122
Q ss_pred cccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc--------
Q 040641 317 STDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD-------- 387 (435)
Q Consensus 317 ~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 387 (435)
.....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+...........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE----ADQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHHCCCChhhchhhhccc
Confidence 234578999999998765 4589999999999999999999999854321 111222222211111000
Q ss_pred ccccccc-------CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 388 VLDPTVL-------NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 388 ~~~~~~~-------~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..++... ..........+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 0000112235678899999999999999999975
No 88
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-36 Score=292.48 Aligned_cols=243 Identities=14% Similarity=0.193 Sum_probs=179.1
Q ss_pred cccCcceeeeecccCcceEEEEEcCC------CCEEEEEEccccccc-----------cHHHHHHHHHHhccCCCCCcee
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLPD------GKTVAVKKFSQAKTQ-----------GHRQFTAEMETLGKVKHQNLVL 243 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~ 243 (435)
...+|++.+.||+|+||.||+|.+.. ++.||||.+...... ....+.+|+..++.++|||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34589999999999999999998754 478999998654321 1123556777888999999999
Q ss_pred EEEEEEeC----CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------
Q 040641 244 LLGYCSFD----EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------ 301 (435)
Q Consensus 244 l~g~~~~~----~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------ 301 (435)
+++++... ...++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC
Confidence 99998765 4579999999 999999997642 358999999999999999999995
Q ss_pred --------cccccccccccCcc------ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccc
Q 040641 302 --------DFGLARLISACETH------VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEK 367 (435)
Q Consensus 302 --------DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~ 367 (435)
|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 99999876432211 113356999999999999989999999999999999999999998642221
Q ss_pred cCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 368 EGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
............ ......+++....... ...+.+++..||+.+|++||++.+|++.|++++
T Consensus 268 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 268 --PKYVRDSKIRYR-ENIASLMDKCFPAANA---PGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp --HHHHHHHHHHHH-HCHHHHHHHHSCTTCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhh-hhHHHHHHHhcccccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 111111111111 1111222222111111 235677888999999999999999999998874
No 89
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-37 Score=294.19 Aligned_cols=232 Identities=28% Similarity=0.432 Sum_probs=167.8
Q ss_pred cCcceeeeecccCcceEEEEEcC--CC--CEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEe-CCeeEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP--DG--KTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSF-DEEKLL 256 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~l 256 (435)
..|.+.+.||+|+||.||+|++. ++ ..||||.++.... ...+.|.+|+.++++++|||||+++++|.. ++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 45778899999999999999853 22 4689999865432 345789999999999999999999999764 457899
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|.++++... ..+++.....++.|+++||+|||+ |||+++.....
T Consensus 169 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 999999999999997542 347888899999999999999996 99999865432
Q ss_pred Cc---cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhC-CCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 313 ET---HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTA-KEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 313 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
.. .......+|+.|+|||...+..++.++|||||||++|||+|| .+||... ........+.. .. ..
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~----~~~~~~~~~~~----~~--~~ 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV----NTFDITVYLLQ----GR--RL 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS----CSSCHHHHHHT----TC--CC
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC----CHHHHHHHHHc----CC--CC
Confidence 21 122345678899999999888899999999999999999995 5555322 12223222211 11 11
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..|.. ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 316 ~~p~~-------~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 316 LQPEY-------CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp CCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCC-------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 1235678899999999999999999999999874
No 90
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.8e-36 Score=287.61 Aligned_cols=235 Identities=16% Similarity=0.156 Sum_probs=181.0
Q ss_pred cCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
.+|++.+.||+|+||.||+|+. .+++.||||.+..... ...+.+|+++++++ +||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 5789999999999999999985 5688999999864432 24588999999999 999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------------cccccccccc
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------------DFGLARLISA 311 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------------DfGla~~~~~ 311 (435)
+ +|+|.+++... ...+++..+..++.|++.||+|||+ |||+++....
T Consensus 87 ~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 87 L-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp C-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred C-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 9 99999999764 2358999999999999999999996 8999886543
Q ss_pred cCcc------ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 312 CETH------VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 312 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
.... ......||+.|+|||+..+..++.++|||||||++|||+||+.||..... ....... ..+.....
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~----~~~~~~~-~~i~~~~~ 237 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA----DTLKERY-QKIGDTKR 237 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----SSHHHHH-HHHHHHHH
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc----ccHHHHH-HHHHhhhc
Confidence 2221 12456899999999999999999999999999999999999999864321 1121111 11110000
Q ss_pred CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 386 DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ..+....... . ++.+++..||+.||.+||++.+|.+.|+++.
T Consensus 238 ~--~~~~~~~~~~---p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 238 A--TPIEVLCENF---P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp H--SCHHHHTTTC---H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred c--CCHHHHhccC---h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 0 0000001111 1 5778889999999999999999999998764
No 91
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-36 Score=279.32 Aligned_cols=228 Identities=23% Similarity=0.303 Sum_probs=172.4
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
.+|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 47899999999999999999864 588999999865443 3457899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccccC
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISACE 313 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~~ 313 (435)
+++|+|.+++.........+++.....++.++++||+|||+ |||+++.....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD- 180 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc-
Confidence 99999999886543223458999999999999999999995 88888765432
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.......||+.|+|||.+. ..++.++|||||||++|||++|+.||..... ... ..............
T Consensus 181 -~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~-------~~~-~~~~~~~~~~~~~~--- 247 (285)
T 3is5_A 181 -EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL-------EEV-QQKATYKEPNYAVE--- 247 (285)
T ss_dssp -------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHH-HHHHHHCCCCCCC----
T ss_pred -ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH-------HHH-HhhhccCCcccccc---
Confidence 2234467999999999875 4678999999999999999999999854221 111 11111111000000
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..+ ....+.+++.+||+.||++|||+.||++
T Consensus 248 ~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001 1134667889999999999999999985
No 92
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-36 Score=286.91 Aligned_cols=236 Identities=23% Similarity=0.391 Sum_probs=176.5
Q ss_pred cccccCcceeeeecccCcceEEEEEcCC-----CCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPD-----GKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
+....+|++.+.||+|+||.||+|.... +..||||.+..... .....|.+|++++++++|||||++++++...+
T Consensus 40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 119 (333)
T 1mqb_A 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119 (333)
T ss_dssp BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence 3455688999999999999999998642 23599999975432 33457999999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++||||+++|+|.+++.... ..+++..+..++.++++||+|||+ |||+++.
T Consensus 120 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp SEEEEEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred CcEEEEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 9999999999999999997642 348899999999999999999996 8999887
Q ss_pred ccccCcc--ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 309 ISACETH--VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 309 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
....... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||..... ..+ ...+.....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~----~~~----~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEV----MKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHH----HHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH----HHH----HHHHHCCCc
Confidence 6432211 1223456788999999988889999999999999999999 9999853211 111 122211110
Q ss_pred CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 386 DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
...+ . .....+.+++.+||+.||++||++.+|++.|++++
T Consensus 269 --~~~~---~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 269 --LPTP---M----DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp --CCCC---T----TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --CCCc---c----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0001 0 11235678899999999999999999999998864
No 93
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=289.95 Aligned_cols=226 Identities=20% Similarity=0.281 Sum_probs=162.9
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
..+|++.+.||+|+||.||+|+.. +++.||||.+.... ..+.+.+|++++++++|||||++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 457899999999999999999875 47899999987543 345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccccC
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISACE 313 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~~ 313 (435)
+++|+|.+++... ..+++.....++.|+++||+|||+ |||+++.....
T Consensus 130 ~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 130 VTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 9999999998653 348899999999999999999995 88888765432
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ......+...... ...+
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~i~~~~~~-~~~~-- 273 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRRILNCEYY-FISP-- 273 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHHHHTTCCC-CCTT--
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHHHHhCCCc-cCCc--
Confidence 2233467999999999999889999999999999999999999998543211 1112222211110 1111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
........+.+++.+||+.||++|||+.|+++
T Consensus 274 ---~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 ---WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ---TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01112235678899999999999999999985
No 94
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.9e-36 Score=281.72 Aligned_cols=237 Identities=14% Similarity=0.154 Sum_probs=182.5
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEEEe
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 259 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+.... ....+.+|+.++.++ +|+||+++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35789999999999999999985 568999999986433 234578899999999 89999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------------ccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------------DFGLARLIS 310 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------------DfGla~~~~ 310 (435)
|+ +|+|.+++.... ..+++..+..++.|+++||+|||+ |||+++...
T Consensus 87 ~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 999999997642 248899999999999999999996 899887665
Q ss_pred ccCc------cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCC
Q 040641 311 ACET------HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQ 384 (435)
Q Consensus 311 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (435)
.... .......||+.|+|||...+..++.++|||||||++|||+||+.||....... .......+........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT-NKQKYERIGEKKQSTP 241 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC-HHHHHHHHHHHHHHSC
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc-cHHHHHHHHhhccCcc
Confidence 3322 12345679999999999998899999999999999999999999986432111 1111111111111110
Q ss_pred CCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 385 ADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
... ... .....+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 242 ~~~-----~~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 242 LRE-----LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp HHH-----HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HHH-----HHh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 000 000 11235678889999999999999999999999875
No 95
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.3e-37 Score=287.52 Aligned_cols=245 Identities=28% Similarity=0.433 Sum_probs=187.1
Q ss_pred ccccccccccCcceeeeecccCcceEEEEEc------CCCCEEEEEEcccccc-ccHHHHHHHHHHhccC-CCCCceeEE
Q 040641 174 NISMFQQPLLKLTLVDILEDGGFGTVYKATL------PDGKTVAVKKFSQAKT-QGHRQFTAEMETLGKV-KHQNLVLLL 245 (435)
Q Consensus 174 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~ 245 (435)
+...|..+..+|++.+.||+|+||.||+|++ .+++.||||.+..... ...+.+.+|++++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3445667778999999999999999999974 3467899999975433 3346799999999999 799999999
Q ss_pred EEEEeCC-eeEEEEecccCCCHHHHHHhhCCC------------CCCCCHHHHHHHHHHhhhccceeec-----------
Q 040641 246 GYCSFDE-EKLLVYEYMVNGSLDLWLRNATGS------------HEVLDRAKRYKIACSSARGLAFLHQ----------- 301 (435)
Q Consensus 246 g~~~~~~-~~~lv~ey~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gl~yLH~----------- 301 (435)
+++...+ ..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||+
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~ 177 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccc
Confidence 9997755 489999999999999999764321 1237889999999999999999996
Q ss_pred -------------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc
Q 040641 302 -------------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQE 366 (435)
Q Consensus 302 -------------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~ 366 (435)
|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 178 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~ 257 (316)
T 2xir_A 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257 (316)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred eEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh
Confidence 8999986543322 22334568899999999888889999999999999999999 88887542211
Q ss_pred ccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 367 KEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+ ...+....... .+ .. ....+.+++.+||+.||++|||+.||++.|++++
T Consensus 258 ---~~~----~~~~~~~~~~~--~~---~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 258 ---EEF----CRRLKEGTRMR--AP---DY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp ---HHH----HHHHHHTCCCC--CC---TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHH----HHHhccCccCC--CC---CC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 11121111100 01 11 1135678889999999999999999999999875
No 96
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.4e-38 Score=295.97 Aligned_cols=242 Identities=23% Similarity=0.328 Sum_probs=184.6
Q ss_pred cccCcceeeeecccCcceEEEEEc-----CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEE--eCCe
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-----PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCS--FDEE 253 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~ 253 (435)
...+|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. ....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 346899999999999999999984 357899999998766556678999999999999999999999987 4566
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+ |||+++..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 899999999999999997643 248999999999999999999996 99999876
Q ss_pred cccCc--cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccc-------cCCcHHHHHHHHh
Q 040641 310 SACET--HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEK-------EGANLVGWVFQKM 380 (435)
Q Consensus 310 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~-------~~~~~~~~~~~~~ 380 (435)
..... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||....... .............
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 43222 12234568889999999888888999999999999999999999975322110 0001111111111
Q ss_pred ccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 381 KKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
...... +........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 258 ~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 258 EEGQRL---------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred hcccCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111100 011112235678899999999999999999999999874
No 97
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-36 Score=281.17 Aligned_cols=234 Identities=21% Similarity=0.321 Sum_probs=180.7
Q ss_pred ccccCcceee-eecccCcceEEEEEcC---CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 180 QPLLKLTLVD-ILEDGGFGTVYKATLP---DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 180 ~~~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
....++.+.+ .||+|+||.||+|.+. +++.||||.++... ....+.+.+|++++++++||||+++++++ ..+..
T Consensus 6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 4456677776 9999999999999853 57789999997643 23456799999999999999999999999 55678
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++||||+++|+|.+++... ...+++.....++.++++||.|||+ |||+++...
T Consensus 85 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEEEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 9999999999999998643 2358899999999999999999996 899998764
Q ss_pred ccCcc--ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 311 ACETH--VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 311 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
..... ......||+.|+|||...+..++.++|||||||++|||+| |+.||..... ..+.. .+......
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~----~i~~~~~~- 232 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG----PEVMA----FIEQGKRM- 232 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT----HHHHH----HHHTTCCC-
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH----HHHHH----HHhcCCcC-
Confidence 33221 1223457899999999887889999999999999999999 9999854221 11221 11111110
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.... .....+.+++.+||+.||++||++.++++.|+++.
T Consensus 233 ----~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 233 ----ECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp ----CCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCC----CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111 11235678889999999999999999999999874
No 98
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.2e-36 Score=282.75 Aligned_cols=242 Identities=25% Similarity=0.367 Sum_probs=186.3
Q ss_pred ccccccccCcceeeeecccCcceEEEEEcC------CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEE
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATLP------DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYC 248 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~ 248 (435)
..|+....+|++.+.||+|+||.||+|+.. +++.||||.+..... .....|.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 345666788999999999999999999754 367899999975432 3345799999999999999999999999
Q ss_pred EeCCeeEEEEecccCCCHHHHHHhhC------CCCCCCCHHHHHHHHHHhhhccceeec---------------------
Q 040641 249 SFDEEKLLVYEYMVNGSLDLWLRNAT------GSHEVLDRAKRYKIACSSARGLAFLHQ--------------------- 301 (435)
Q Consensus 249 ~~~~~~~lv~ey~~~g~L~~~l~~~~------~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------- 301 (435)
...+..++||||+++|+|.+++.... .....+++...+.++.+++.||+|||+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence 99999999999999999999987532 112346889999999999999999996
Q ss_pred ---cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHH
Q 040641 302 ---DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWV 376 (435)
Q Consensus 302 ---DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~ 376 (435)
|||+++....... .......||+.|+|||+..+..++.++|||||||++|||+| |+.||..... ...
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~---- 249 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----EQV---- 249 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH----HHH----
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH----HHH----
Confidence 8999886543322 12233467889999999888889999999999999999999 7888743211 111
Q ss_pred HHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 377 FQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
...+........ .. .....+.+++.+||+.||++|||+.|+++.|++++
T Consensus 250 ~~~~~~~~~~~~-----~~----~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 250 LRFVMEGGLLDK-----PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHHHHTTCCCCC-----CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHHHHcCCcCCC-----CC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 111211111100 01 11234678889999999999999999999999875
No 99
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.5e-36 Score=288.30 Aligned_cols=233 Identities=21% Similarity=0.195 Sum_probs=172.4
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc-----cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK-----TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..+|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|||||++++++...+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 457999999999999999999864 58899999986432 334568999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCC------------------------------------CCCCCCHHHHHHHHHHhhhcccee
Q 040641 256 LVYEYMVNGSLDLWLRNATG------------------------------------SHEVLDRAKRYKIACSSARGLAFL 299 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~ia~gl~yL 299 (435)
+||||+++|+|.+++..... ....+++.....++.|+++||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999998852110 011235566778999999999999
Q ss_pred ec--------------------------cccccccccccCc---cccccccccCCCcCCcCCCC--CCCCCcccchhHHH
Q 040641 300 HQ--------------------------DFGLARLISACET---HVSTDIAGTLGYIPPEYGQS--RMSTTRGDVYSFGV 348 (435)
Q Consensus 300 H~--------------------------DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~SfGv 348 (435)
|+ |||+++....... .......||+.|+|||.+.+ ..++.++|||||||
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 95 8999876543211 12345679999999998765 67899999999999
Q ss_pred HHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 349 ILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 349 il~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
++|||+||+.||..... .............. ..+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 265 il~el~~g~~pf~~~~~-------~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 265 LLHLLLMGAVPFPGVND-------ADTISQVLNKKLCF--ENPNY-----NVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCT--TSGGG-----GGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCCCCCCh-------HHHHHHHHhccccc--CCccc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99999999999854321 11112222211110 01110 011235678889999999999999999985
No 100
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.4e-37 Score=289.72 Aligned_cols=226 Identities=20% Similarity=0.309 Sum_probs=171.9
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe-------
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE------- 253 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------- 253 (435)
.+|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++|||||+++++|...+.
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 46889999999999999999975 689999999965433 345679999999999999999999999866442
Q ss_pred --------------------------------------------------eEEEEecccCCCHHHHHHhhCCCCCCCCHH
Q 040641 254 --------------------------------------------------KLLVYEYMVNGSLDLWLRNATGSHEVLDRA 283 (435)
Q Consensus 254 --------------------------------------------------~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~ 283 (435)
.++|||||++|+|.+++.... ......+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~ 164 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHG 164 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhH
Confidence 799999999999999998643 23446777
Q ss_pred HHHHHHHHhhhccceeec------------------------cccccccccccCc-----------cccccccccCCCcC
Q 040641 284 KRYKIACSSARGLAFLHQ------------------------DFGLARLISACET-----------HVSTDIAGTLGYIP 328 (435)
Q Consensus 284 ~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~-----------~~~~~~~gt~~y~a 328 (435)
....++.|++.||+|||+ |||+++....... .......||+.|+|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 788999999999999996 9999987654321 12234579999999
Q ss_pred CcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHH
Q 040641 329 PEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRI 408 (435)
Q Consensus 329 PE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 408 (435)
||.+.+..++.++|||||||++|||++|..|+.. ... ............ ........+.++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---------~~~-~~~~~~~~~~~~---------~~~~~~~~~~~l 305 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---------RVR-IITDVRNLKFPL---------LFTQKYPQEHMM 305 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---------HHH-HHHHHHTTCCCH---------HHHHHCHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---------HHH-HHHHhhccCCCc---------ccccCChhHHHH
Confidence 9999888999999999999999999998766311 000 111111111110 011223356788
Q ss_pred HhcccCCCCCCCCCHHHHHH
Q 040641 409 AADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 409 ~~~C~~~~P~~RPs~~evl~ 428 (435)
+.+||+.||++|||+.|+++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHccCCCCcCCCHHHHhh
Confidence 99999999999999999986
No 101
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.8e-36 Score=287.88 Aligned_cols=242 Identities=26% Similarity=0.403 Sum_probs=185.6
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCC------CCEEEEEEcccccc-ccHHHHHHHHHHhccC-CCCCceeEEEEE
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPD------GKTVAVKKFSQAKT-QGHRQFTAEMETLGKV-KHQNLVLLLGYC 248 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~ 248 (435)
.+..+..+|++.+.||+|+||.||+|.... .+.||+|.+..... ...+.+.+|+++++++ +|||||+++++|
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 456677899999999999999999998642 24799999975432 3456799999999999 899999999999
Q ss_pred EeCCeeEEEEecccCCCHHHHHHhhCC----------CCCCCCHHHHHHHHHHhhhccceeec-----------------
Q 040641 249 SFDEEKLLVYEYMVNGSLDLWLRNATG----------SHEVLDRAKRYKIACSSARGLAFLHQ----------------- 301 (435)
Q Consensus 249 ~~~~~~~lv~ey~~~g~L~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~gl~yLH~----------------- 301 (435)
...+..++||||+++|+|.+++..... ....+++.....++.+++.||+|||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEG
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECC
Confidence 999999999999999999999875421 12347889999999999999999996
Q ss_pred -------cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcH
Q 040641 302 -------DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANL 372 (435)
Q Consensus 302 -------DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~ 372 (435)
|||+++....... .......||+.|+|||...+..++.++|||||||++|||+| |..||...... ..+
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~ 276 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN---SKF 276 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS---HHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh---HHH
Confidence 9999986543322 22334567889999999888889999999999999999999 88887543211 111
Q ss_pred HHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 373 VGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ........ ...+. .. ...+.+++.+||+.||++|||+.||++.|+++.
T Consensus 277 ~----~~~~~~~~--~~~~~---~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 277 Y----KLVKDGYQ--MAQPA---FA----PKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp H----HHHHHTCC--CCCCT---TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H----HHHhcCCC--CCCCC---CC----CHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 1 11111100 00111 11 135678899999999999999999999998864
No 102
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8e-37 Score=288.91 Aligned_cols=228 Identities=23% Similarity=0.323 Sum_probs=173.8
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
..+|++.+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+.+++.++|||||++++++..++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357999999999999999999865 689999999864332 233568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC-c
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE-T 314 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~-~ 314 (435)
|+++|+|.+++... ..+++.....++.|++.||+|||+ |||+++...... .
T Consensus 86 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999998887543 348899999999999999999996 999998654322 1
Q ss_pred cccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
......+||+.|+|||++.+..+ +.++|||||||++|||+||+.||...... ...... ...... ...+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~-----~~~~~~--~~~~-- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSD-----WKEKKT--YLNP-- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT--SHHHHH-----HHTTCT--TSTT--
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHH-----Hhcccc--cCCc--
Confidence 22345689999999999877665 77899999999999999999998643221 011111 111100 0011
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.......+.+++.+||+.||++|||+.|+++
T Consensus 231 ----~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 231 ----WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0111234668889999999999999999875
No 103
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.8e-36 Score=309.09 Aligned_cols=231 Identities=24% Similarity=0.338 Sum_probs=174.1
Q ss_pred ccCcceee-eecccCcceEEEEEcC---CCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 182 LLKLTLVD-ILEDGGFGTVYKATLP---DGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 182 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
...+.+.+ .||+|+||.||+|.+. .++.||||+++.... ...++|.+|+++|++++|||||+++++|. .+..+
T Consensus 367 ~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~ 445 (635)
T 4fl3_A 367 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWM 445 (635)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEE
T ss_pred chhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEE
Confidence 33444443 7999999999999653 467899999975432 33578999999999999999999999996 45688
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+|||||++|+|.+++... ..+++..+..++.|++.||+|||+ |||+++.+..
T Consensus 446 lv~E~~~~g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 446 LVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521 (635)
T ss_dssp EEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred EEEEccCCCCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence 999999999999999753 248899999999999999999996 9999987654
Q ss_pred cCc--cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 312 CET--HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 312 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
... ...+...||+.|+|||++....++.++|||||||++|||+| |+.||..... ..+ ...+........
T Consensus 522 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~----~~~----~~~i~~~~~~~~ 593 (635)
T 4fl3_A 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SEV----TAMLEKGERMGC 593 (635)
T ss_dssp -------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHH----HHHHHTTCCCCC
T ss_pred CccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHH----HHHHHcCCCCCC
Confidence 322 22233457889999999988899999999999999999999 9999854321 111 222222111110
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
| . .+...+.+++..||+.||++||++.+|++.|+++.
T Consensus 594 --p---~----~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 594 --P---A----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp --C---T----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --C---C----CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 1 1 12235778999999999999999999999999864
No 104
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=285.94 Aligned_cols=242 Identities=26% Similarity=0.387 Sum_probs=183.0
Q ss_pred cccCcceeeeecccCcceEEEEEc-----CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCC--e
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-----PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE--E 253 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~ 253 (435)
...+|++.+.||+|+||.||+|++ .+++.||||++........+.|.+|++++++++||||+++++++...+ .
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 346789999999999999999984 358899999997765556678999999999999999999999987644 6
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.++||||+++|+|.+++.... ..+++.....++.++++||+|||+ |||+++..
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eEEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 899999999999999997642 348899999999999999999996 89999876
Q ss_pred cccCcc--ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCccc--------ccCCcHHHHHHHH
Q 040641 310 SACETH--VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQE--------KEGANLVGWVFQK 379 (435)
Q Consensus 310 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~--------~~~~~~~~~~~~~ 379 (435)
...... ......+|..|+|||...+..++.++|||||||++|||+||+.|+...... .........+...
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 543221 123345778899999988888899999999999999999999887532100 0000011111111
Q ss_pred hccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 380 MKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
+...... ... ......+.+++.+||+.||++|||+.||++.|+++.
T Consensus 276 ~~~~~~~-----~~~----~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 276 LKNNGRL-----PRP----DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHTTCCC-----CCC----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhcCCCC-----CCC----CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111100 000 112235778899999999999999999999999875
No 105
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-37 Score=294.21 Aligned_cols=238 Identities=24% Similarity=0.344 Sum_probs=179.3
Q ss_pred cCcceeeeecccCcceEEEEEcC-----CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeC--Cee
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-----DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFD--EEK 254 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 254 (435)
+.|++.+.||+|+||.||++.+. +++.||||++..... ...+.|.+|++++++++||||+++++++... ...
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 34589999999999999998653 578899999975432 3456799999999999999999999999874 578
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++||||+++|+|.+++... .+++.....++.+++.||+|||+ |||+++...
T Consensus 111 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 9999999999999999753 28899999999999999999996 999998765
Q ss_pred ccCc--cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccc-------cCCcHHHHHHHHhc
Q 040641 311 ACET--HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEK-------EGANLVGWVFQKMK 381 (435)
Q Consensus 311 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~-------~~~~~~~~~~~~~~ 381 (435)
.... .......||..|+|||.+.+..++.++|||||||++|||+||+.||....... ............+.
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 4322 12334568889999999888888999999999999999999999975421100 00000001111111
Q ss_pred cCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 382 KQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.... + +........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 266 ~~~~-----~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 266 RGER-----L----PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp TTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccC-----C----CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1110 0 001112235778899999999999999999999999875
No 106
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.9e-36 Score=283.06 Aligned_cols=242 Identities=22% Similarity=0.333 Sum_probs=174.1
Q ss_pred ccccccccCcceeeeecccCcceEEEEEcC----CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEE
Q 040641 176 SMFQQPLLKLTLVDILEDGGFGTVYKATLP----DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCS 249 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 249 (435)
..+.....+|.+.+.||+|+||.||+|... +++.||||.++... ....+.|.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 344556678999999999999999999753 34589999987543 233467999999999999999999999998
Q ss_pred eCCe-----eEEEEecccCCCHHHHHHhhC--CCCCCCCHHHHHHHHHHhhhccceeec---------------------
Q 040641 250 FDEE-----KLLVYEYMVNGSLDLWLRNAT--GSHEVLDRAKRYKIACSSARGLAFLHQ--------------------- 301 (435)
Q Consensus 250 ~~~~-----~~lv~ey~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------- 301 (435)
..+. .++||||+++|+|.+++.... .....+++...+.++.++++||.|||+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCE
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcE
Confidence 7553 499999999999999986432 223468999999999999999999996
Q ss_pred ---cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHH
Q 040641 302 ---DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWV 376 (435)
Q Consensus 302 ---DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~ 376 (435)
|||+++....... .......+|+.|+|||...+..++.++||||||+++|||+| |..||..... ......+
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~~~ 262 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN----HEMYDYL 262 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG----GGHHHHH
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH----HHHHHHH
Confidence 8999876543221 12233467889999999988899999999999999999999 7778753221 1222221
Q ss_pred HHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 377 FQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.. .... .... .....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 263 ~~----~~~~-----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 263 LH----GHRL-----KQPE----DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp HT----TCCC-----CCBT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hc----CCCC-----CCCc----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 1100 0001 11235678889999999999999999999999875
No 107
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.1e-36 Score=278.89 Aligned_cols=238 Identities=24% Similarity=0.295 Sum_probs=174.1
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++|||||++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47899999999999999999865 588999999865432 234678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCcc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACETH 315 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~~ 315 (435)
|+++ ++..++... ...+++.....++.|++.||+|||+ |||+++..... ..
T Consensus 82 ~~~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VR 156 (292)
T ss_dssp CCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC-CS
T ss_pred cCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc-cc
Confidence 9986 555555432 2348899999999999999999996 99999876432 22
Q ss_pred ccccccccCCCcCCcCCCCCC-CCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc---c--
Q 040641 316 VSTDIAGTLGYIPPEYGQSRM-STTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV---L-- 389 (435)
Q Consensus 316 ~~~~~~gt~~y~aPE~~~~~~-~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 389 (435)
......||+.|+|||++.+.. ++.++|||||||++|||+||+.|+..... .......+............ .
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND---VDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS---HHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC---HHHHHHHHHHHhCCCChhhhhhhccc
Confidence 334567899999999887654 89999999999999999999988643221 11222222222211111000 0
Q ss_pred -c----c-----cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 390 -D----P-----TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 390 -~----~-----~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
+ + .............+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0 0000000112235668889999999999999999985
No 108
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-36 Score=295.34 Aligned_cols=231 Identities=19% Similarity=0.201 Sum_probs=178.1
Q ss_pred cccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
.....+|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++|||||+++++|.+.+..
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 345678999999999999999999875 58899999986532 22334588999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++|||||++|+|.++++.. .+++.....++.+++.||+|||+ |||+++...
T Consensus 145 ~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~ 219 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence 9999999999999998753 37888899999999999999996 999998765
Q ss_pred ccCccccccccccCCCcCCcCCCCCC----CCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 311 ACETHVSTDIAGTLGYIPPEYGQSRM----STTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
..........+||+.|+|||++.... ++.++|||||||++|||+||+.||..... ......+........
T Consensus 220 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~----~~~~~~i~~~~~~~~-- 293 (410)
T 3v8s_A 220 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----VGTYSKIMNHKNSLT-- 293 (410)
T ss_dssp TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTHHHHCC--
T ss_pred cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh----hhHHHHHHhcccccc--
Confidence 44333344678999999999876654 78999999999999999999999864321 111111111100000
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCC--CCCHHHHHH
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPAT--RPTMLHVLK 428 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~--RPs~~evl~ 428 (435)
. |.. .. ....+.+++.+|+..+|.+ ||++.||++
T Consensus 294 -~--p~~--~~---~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 294 -F--PDD--ND---ISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp -C--CTT--CC---CCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred -C--CCc--cc---ccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 0 100 00 1124667888999999988 999999975
No 109
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.9e-36 Score=284.95 Aligned_cols=232 Identities=23% Similarity=0.348 Sum_probs=169.1
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEcccccc---ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe----
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKT---QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE---- 253 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 253 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+..... .....|.+|++++++++|||||++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35799999999999999999985 5688999999975432 234578999999999999999999999876554
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.++||||+++|+|.++++... .+++.....++.|++.||+|||+ |||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 399999999999999997642 48899999999999999999996 99999866
Q ss_pred cccCc--cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 310 SACET--HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 310 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
..... .......||+.|+|||++.+..++.++|||||||++|||+||+.||.... ...............
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~~~~~- 238 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-------PVSVAYQHVREDPIP- 238 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHCCCCC-
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHhcCCCCC-
Confidence 43221 12234579999999999988899999999999999999999999985432 112222222221111
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHH-HHHh
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVL-KLLH 431 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl-~~L~ 431 (435)
+...... ....+.+++.+||+.||++||++.+++ ..+.
T Consensus 239 ---~~~~~~~---~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 239 ---PSARHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp ---HHHHSTT---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ---cccccCC---CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 1000011 123567888999999999999776655 4443
No 110
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8.4e-37 Score=291.57 Aligned_cols=240 Identities=14% Similarity=0.146 Sum_probs=173.8
Q ss_pred ccCcceeeeecccCcceEEEEEcC----CCCEEEEEEccccccc-----------cHHHHHHHHHHhccCCCCCceeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP----DGKTVAVKKFSQAKTQ-----------GHRQFTAEMETLGKVKHQNLVLLLG 246 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~g 246 (435)
..+|.+.+.||+|+||.||+|+.. ++..||||.+...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 457999999999999999999875 5678999998654321 1235778999999999999999999
Q ss_pred EEEe----CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------
Q 040641 247 YCSF----DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------- 301 (435)
Q Consensus 247 ~~~~----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------- 301 (435)
++.. ....++||||+ +|+|.+++.... .+++..+..++.|++.||+|||+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence 9988 67889999999 999999987542 58999999999999999999996
Q ss_pred -----cccccccccccCc------cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCC
Q 040641 302 -----DFGLARLISACET------HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGA 370 (435)
Q Consensus 302 -----DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~ 370 (435)
|||+++.+..... .......||+.|+|||+..+..++.++|||||||++|||+||+.||.......
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--- 267 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP--- 267 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH---
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc---
Confidence 8999977643221 11244679999999999988889999999999999999999999985322111
Q ss_pred cHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhh
Q 040641 371 NLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEI 433 (435)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i 433 (435)
.............. .......... ......+.+++.+||+.||++|||+.+|++.|+++
T Consensus 268 ~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 268 VAVQTAKTNLLDEL-PQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHHHHHTT-THHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHHHhhcccc-cHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 11111111111111 1100000000 01123577888999999999999999999999875
No 111
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.4e-36 Score=297.61 Aligned_cols=234 Identities=20% Similarity=0.217 Sum_probs=179.0
Q ss_pred cccccCcceeeeecccCcceEEEEEcCC-CCEEEEEEcccccc---ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPD-GKTVAVKKFSQAKT---QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
.....+|++.++||+|+||.||+|+..+ ++.||||+++.... .....+.+|..++..++|||||+++++|.+.+..
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 3456789999999999999999999764 78999999965321 2233488999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++|||||++|+|.+++.... ..+++.....++.+++.||+|||+ |||+++...
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~ 226 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226 (437)
T ss_dssp EEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence 99999999999999997632 348899999999999999999996 999998765
Q ss_pred ccCccccccccccCCCcCCcCCC-----CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 311 ACETHVSTDIAGTLGYIPPEYGQ-----SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
..........+||+.|||||++. ...++.++|||||||++|||+||+.||..... ......+.........
T Consensus 227 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~ 302 (437)
T 4aw2_A 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL----VETYGKIMNHKERFQF 302 (437)
T ss_dssp TTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTHHHHCCC
T ss_pred cCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh----hHHHHhhhhccccccC
Confidence 54444445578999999999875 56789999999999999999999999864321 1111111111111110
Q ss_pred CccccccccCCCCHHHHHHHHHHHhcccCCCCCC--CCCHHHHHH
Q 040641 386 DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPAT--RPTMLHVLK 428 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~--RPs~~evl~ 428 (435)
|..... ....+.+++.+|+..+|++ ||++.|+++
T Consensus 303 -----p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 303 -----PTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp -----CSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred -----Cccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 111011 1124567788888888887 999999874
No 112
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=281.83 Aligned_cols=225 Identities=23% Similarity=0.296 Sum_probs=168.4
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--------------------------ccHHHHHHHHHHhc
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--------------------------QGHRQFTAEMETLG 234 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 234 (435)
..+|++.+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 457999999999999999999864 588999999864321 11246889999999
Q ss_pred cCCCCCceeEEEEEEe--CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------
Q 040641 235 KVKHQNLVLLLGYCSF--DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------- 301 (435)
Q Consensus 235 ~l~H~niv~l~g~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------- 301 (435)
+++|||||++++++.. .+..++||||+++|+|.+++. ...+++.....++.|+++||+|||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence 9999999999999986 567899999999999876543 2358999999999999999999996
Q ss_pred -------------cccccccccccCccccccccccCCCcCCcCCCCCC---CCCcccchhHHHHHHHHHhCCCCCCCCcc
Q 040641 302 -------------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRM---STTRGDVYSFGVILLELVTAKEPTGPEFQ 365 (435)
Q Consensus 302 -------------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~DV~SfGvil~El~tg~~p~~~~~~ 365 (435)
|||+++...... .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~- 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER- 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred HEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-
Confidence 999998765432 2234567999999999987654 4788999999999999999999985421
Q ss_pred cccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 366 EKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.... ...+...... ..+. +. ....+.+++.+||+.||++|||+.|+++
T Consensus 245 ------~~~~-~~~~~~~~~~-~~~~----~~---~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 ------IMCL-HSKIKSQALE-FPDQ----PD---IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ------HHHH-HHHHHHCCCC-CCSS----SC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------HHHH-HHHHhcccCC-CCCc----cc---cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1111 1112111111 0000 01 1135678889999999999999999874
No 113
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1e-35 Score=287.65 Aligned_cols=228 Identities=18% Similarity=0.294 Sum_probs=174.3
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc---ccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT---QGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 255 (435)
...+|++.++||+|+||.||+|+.. +++.||||+++.... ...+.+.+|..++.++ +|||||++++++...+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3468999999999999999999865 578999999975432 2334578899999876 8999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|..++.... .+++.....++.+++.||+|||+ |||+++....
T Consensus 130 lV~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999987642 48899999999999999999996 9999986332
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCccccc-CCcHHHHHHHHhccCCCCcccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKE-GANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+...+...... -
T Consensus 206 ~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~---~ 281 (396)
T 4dc2_A 206 P-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR---I 281 (396)
T ss_dssp T-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC---C
T ss_pred C-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC---C
Confidence 2 2234457899999999999999999999999999999999999999953221111 111122223332222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHhcccCCCCCCCCCH
Q 040641 391 PTVLNAGSKPMMLKMLRIAADCVADNPATRPTM 423 (435)
Q Consensus 391 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~ 423 (435)
|. . ....+.+++.+||+.||++||++
T Consensus 282 p~---~----~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 282 PR---S----LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CT---T----SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CC---c----CCHHHHHHHHHHhcCCHhHcCCC
Confidence 11 1 12246688899999999999985
No 114
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-35 Score=282.37 Aligned_cols=237 Identities=28% Similarity=0.415 Sum_probs=173.5
Q ss_pred ccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhcc--CCCCCceeEEEEEEeC----CeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGK--VKHQNLVLLLGYCSFD----EEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~ 255 (435)
..+|++.+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++.. ++||||+++++++... ...+
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 457999999999999999999875 8899999985432 2345555555554 4999999999999887 7789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceee----------c----------------------cc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLH----------Q----------------------DF 303 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH----------~----------------------Df 303 (435)
+||||+++|+|.++++.. .+++.....++.+++.||+||| . ||
T Consensus 112 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp EEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 999999999999999753 3889999999999999999998 2 89
Q ss_pred cccccccccCccc---cccccccCCCcCCcCCCCCCCCCc------ccchhHHHHHHHHHhC----------CCCCCCCc
Q 040641 304 GLARLISACETHV---STDIAGTLGYIPPEYGQSRMSTTR------GDVYSFGVILLELVTA----------KEPTGPEF 364 (435)
Q Consensus 304 Gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------~DV~SfGvil~El~tg----------~~p~~~~~ 364 (435)
|+++......... .....||+.|+|||++.+...+.+ +|||||||++|||+|| +.||....
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~ 266 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence 9987654322211 124579999999999877766655 9999999999999999 55554322
Q ss_pred ccccCCcHHHHHHHHhccCCCCccccccccC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 365 QEKEGANLVGWVFQKMKKQQADDVLDPTVLN-AGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.... .. ............ .+.... .....+...+.+++.+||+.||++|||+.||++.|+++.
T Consensus 267 ~~~~--~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 330 (337)
T 3mdy_A 267 PSDP--SY-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330 (337)
T ss_dssp CSSC--CH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC--ch-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence 2111 11 111111111111 111110 111245667889999999999999999999999999875
No 115
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.6e-35 Score=273.75 Aligned_cols=225 Identities=21% Similarity=0.254 Sum_probs=176.9
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEecc
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEYM 261 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 261 (435)
.+|++.+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 46899999999999999999865 47799999997766666788999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccccCc
Q 040641 262 VNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISACET 314 (435)
Q Consensus 262 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~~~ 314 (435)
++|+|.+++.... .+++.....++.+++.||+|||+ |||+++......
T Consensus 89 ~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~- 163 (277)
T 3f3z_A 89 TGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK- 163 (277)
T ss_dssp CSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-
Confidence 9999999887642 47899999999999999999995 888887654322
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
......||+.|+|||...+. ++.++||||||+++|||+||+.||..... .. ....+...... .+...
T Consensus 164 -~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~-~~~~~~~~~~~---~~~~~ 230 (277)
T 3f3z_A 164 -MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD-------SE-VMLKIREGTFT---FPEKD 230 (277)
T ss_dssp -CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HHHHHHHCCCC---CCHHH
T ss_pred -chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH-------HH-HHHHHHhCCCC---CCchh
Confidence 22345799999999988654 89999999999999999999999854321 11 11111111110 00000
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. .....+.+++.+||+.||++|||+.++++
T Consensus 231 ~~---~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 231 WL---NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HT---TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hh---cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 01235678889999999999999999874
No 116
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.3e-36 Score=284.95 Aligned_cols=226 Identities=21% Similarity=0.249 Sum_probs=156.1
Q ss_pred eeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCC-CCCceeEEEEEEeCCeeEEEEecccCCC
Q 040641 188 VDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-HQNLVLLLGYCSFDEEKLLVYEYMVNGS 265 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~g~ 265 (435)
.+.||+|+||.||+|+.. +++.||||.+... ....+.+|+.+++++. |||||++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 378999999999999875 5899999998643 3456789999999997 9999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccccCccccc
Q 040641 266 LDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISACETHVST 318 (435)
Q Consensus 266 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~~~~~~~ 318 (435)
|.+++... ..+++.....++.+++.||+|||+ |||+++...... ....
T Consensus 93 L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~ 167 (325)
T 3kn6_A 93 LFERIKKK----KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLK 167 (325)
T ss_dssp HHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccc
Confidence 99999764 348999999999999999999995 899987654322 2234
Q ss_pred cccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCC
Q 040641 319 DIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGS 398 (435)
Q Consensus 319 ~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (435)
..+||+.|+|||++.+..++.++|||||||++|||++|+.||.............. ....+...... ..+ ...
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~----~~~ 240 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-IMKKIKKGDFS--FEG----EAW 240 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH-HHHHHTTTCCC--CCS----HHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH-HHHHHHcCCCC--CCc----ccc
Confidence 56789999999999999999999999999999999999999865432222222222 22222222111 000 000
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 399 KPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 399 ~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
......+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 112235678899999999999999998863
No 117
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=284.28 Aligned_cols=226 Identities=20% Similarity=0.295 Sum_probs=176.8
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|+++++.++|||||++++++...+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3468999999999999999999865 58899999986532 3345678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|..++... ..+++.....++.+++.||.|||+ |||+++.+...
T Consensus 93 v~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp EECCCTTEEHHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 99999999999999753 348889999999999999999996 99999876432
Q ss_pred CccccccccccCCCcCCcCCCC---CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQS---RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
......+||+.|+|||++.. ..++.++|||||||++|||+||+.||..... ..... .......... .
T Consensus 169 --~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~----~~~~~-~~~~~~~~~~---~ 238 (384)
T 4fr4_A 169 --TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS----TSSKE-IVHTFETTVV---T 238 (384)
T ss_dssp --CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT----SCHHH-HHHHHHHCCC---C
T ss_pred --CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC----ccHHH-HHHHHhhccc---C
Confidence 23345789999999998864 4589999999999999999999999864321 11111 1111111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCC-HHHHH
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPT-MLHVL 427 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs-~~evl 427 (435)
.|. .....+.+++.+||+.||++||+ +.+|.
T Consensus 239 ~p~-------~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 239 YPS-------AWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp CCT-------TSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred CCC-------cCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 011 11235678889999999999998 66665
No 118
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2e-36 Score=286.58 Aligned_cols=232 Identities=24% Similarity=0.389 Sum_probs=175.6
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCE----EEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKT----VAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..+|++.+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|+.++++++|||||+++++|. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 457899999999999999999864 3443 7888875432 233456788999999999999999999986 56789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|.+++... ...+++.....++.|+++||+|||+ |||+++....
T Consensus 91 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999998753 2357888999999999999999996 9999987654
Q ss_pred cCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 312 CET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 312 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.... ...+...+ .... ...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~----~~~~~~~~----~~~~--~~~ 237 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR----LAEVPDLL----EKGE--RLA 237 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC----TTHHHHHH----HTTC--BCC
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC----HHHHHHHH----HcCC--CCC
Confidence 322 22345678889999999988889999999999999999999 999985432 11222221 1111 111
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.+.... ..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 238 ~~~~~~-------~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 238 QPQICT-------IDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp CCTTBC-------TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred CCCcCc-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111 13567888999999999999999999998764
No 119
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-35 Score=277.66 Aligned_cols=221 Identities=20% Similarity=0.309 Sum_probs=176.8
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|++.+.||+|+||.||+|+.. +|+.||+|.++... ....+.+.+|+.+++.++|||||++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 457899999999999999999865 68999999996532 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|.+++... ..+++.....++.+++.||+|||+ |||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 9999999999999764 247888999999999999999996 9999986543
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ... ...+..... .-|..
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~-~~~i~~~~~---~~p~~ 225 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-------MKT-YEKILNAEL---RFPPF 225 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHH-HHHHHHCCC---CCCTT
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHH-HHHHHhCCC---CCCCC
Confidence 12346899999999999999999999999999999999999999854321 111 111111111 01111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRP-----TMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----s~~evl~ 428 (435)
....+.+++.+|++.||++|| ++.||++
T Consensus 226 -------~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 -------FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -------SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -------CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 112466788899999999999 8888863
No 120
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-35 Score=288.65 Aligned_cols=183 Identities=18% Similarity=0.210 Sum_probs=152.6
Q ss_pred ccccccCcceeeeeccc--CcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 178 FQQPLLKLTLVDILEDG--GFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
+.....+|++.+.||+| +||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++..++
T Consensus 20 ~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 99 (389)
T 3gni_B 20 FLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN 99 (389)
T ss_dssp CCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC
Confidence 34455789999999999 99999999875 68999999996543 233467888999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++|||||++|+|.+++.... ...+++.....++.|++.||+|||+ |||.+..
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 100 ELWVVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999999997642 2348899999999999999999996 8888764
Q ss_pred ccccCc------cccccccccCCCcCCcCCCC--CCCCCcccchhHHHHHHHHHhCCCCCCC
Q 040641 309 ISACET------HVSTDIAGTLGYIPPEYGQS--RMSTTRGDVYSFGVILLELVTAKEPTGP 362 (435)
Q Consensus 309 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~SfGvil~El~tg~~p~~~ 362 (435)
...... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 422111 11123478999999998877 6799999999999999999999999864
No 121
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.9e-36 Score=284.46 Aligned_cols=224 Identities=25% Similarity=0.370 Sum_probs=173.7
Q ss_pred ccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
.+...|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++|||||++++++..++..+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 130 (348)
T 1u5q_A 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW 130 (348)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEE
Confidence 3445688999999999999999985 568899999986432 223467899999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||++ |+|.+++.... ..+++..+..++.++++||+|||+ |||+++....
T Consensus 131 lv~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 131 LVMEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EEEECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EEEecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9999997 67887776432 348899999999999999999996 8999876543
Q ss_pred cCccccccccccCCCcCCcCC---CCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 312 CETHVSTDIAGTLGYIPPEYG---QSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~---~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
. ....||+.|+|||++ ....++.++|||||||++|||+||+.||.... ............ .
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-------~~~~~~~~~~~~-~--- 270 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNE-S--- 270 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHSC-C---
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHhcC-C---
Confidence 2 345799999999986 35678999999999999999999999985321 112222222111 1
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
+....... ...+.+++.+||+.||++|||+.++++
T Consensus 271 --~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 271 --PALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp --CCCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCCCCC---CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11111111 124567888999999999999999874
No 122
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=9.3e-36 Score=283.93 Aligned_cols=237 Identities=27% Similarity=0.386 Sum_probs=179.8
Q ss_pred ccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhcc--CCCCCceeEEEEEEeCC----eeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGK--VKHQNLVLLLGYCSFDE----EKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~ 255 (435)
..+|++.+.||+|+||.||+|+. +++.||||.+... ....+.+|++++.. ++||||+++++++.... ..+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred cccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 35789999999999999999998 4899999998643 34567888888876 79999999999998876 789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceee--------c------------------------cc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLH--------Q------------------------DF 303 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH--------~------------------------Df 303 (435)
+||||+++|+|.+++... .+++..+..++.+++.||+||| + ||
T Consensus 117 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp EEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred EEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 999999999999999753 3889999999999999999999 4 89
Q ss_pred cccccccccCcc---ccccccccCCCcCCcCCCCC------CCCCcccchhHHHHHHHHHhC----------CCCCCCCc
Q 040641 304 GLARLISACETH---VSTDIAGTLGYIPPEYGQSR------MSTTRGDVYSFGVILLELVTA----------KEPTGPEF 364 (435)
Q Consensus 304 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~SfGvil~El~tg----------~~p~~~~~ 364 (435)
|+++........ ......||+.|+|||.+.+. .++.++|||||||++|||+|| +.||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 998776543221 22345799999999987765 234689999999999999999 66765432
Q ss_pred ccccCCcHHHHHHHHhccCCCCccccccccC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 365 QEKEGANLVGWVFQKMKKQQADDVLDPTVLN-AGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
... .....+ ...+.... ..+.... .........+.+++.+||+.||++|||+.||++.|+++.
T Consensus 272 ~~~--~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 272 PSD--PSVEEM-RKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp CSS--CCHHHH-HHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCc--ccHHHH-HHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 211 111111 22221111 1111111 012345567888999999999999999999999999874
No 123
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.5e-36 Score=279.47 Aligned_cols=234 Identities=28% Similarity=0.425 Sum_probs=175.8
Q ss_pred ccCcceeeeecccCcceEEEEEcCC----CCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEe-CCeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLPD----GKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSF-DEEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~ 255 (435)
...|++.+.||+|+||.||+|+..+ ...||||.+..... ...+.+.+|+.++++++||||++++++|.. ++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4568899999999999999998643 23589999875433 345679999999999999999999999754 56789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|.++++... ..+++.....++.++++||+|||+ |||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 9999999999999997532 347888999999999999999996 9999986543
Q ss_pred cCc---cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 312 CET---HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 312 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
... .......||+.|+|||...+..++.++||||||+++|||+||+.|+.... ............. ..
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~------~~ 251 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV---NTFDITVYLLQGR------RL 251 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS---CTTTHHHHHHTTC------CC
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC---CHHHHHHHHhcCC------CC
Confidence 221 22334567889999999988889999999999999999999655543222 1222222211111 01
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+.. ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 252 ~~~~~-------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 252 LQPEY-------CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp CCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcc-------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 1125678889999999999999999999999875
No 124
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.8e-36 Score=284.92 Aligned_cols=239 Identities=25% Similarity=0.365 Sum_probs=179.7
Q ss_pred cccccCcceeeeecccCcceEEEEEcC------CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeC
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLP------DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD 251 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 251 (435)
+....+|++.+.||+|+||.||+|++. +++.||||.+.... ......+.+|+.++++++||||+++++++...
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 345678999999999999999999842 46789999996432 33456799999999999999999999999999
Q ss_pred CeeEEEEecccCCCHHHHHHhhCCC---CCCCCHHHHHHHHHHhhhccceeec---------------------------
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATGS---HEVLDRAKRYKIACSSARGLAFLHQ--------------------------- 301 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~~---~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------- 301 (435)
+..++||||+++|+|.+++...... ...+++...+.++.+++.||.|||+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999999865321 2458899999999999999999995
Q ss_pred cccccccccccCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHH
Q 040641 302 DFGLARLISACET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQK 379 (435)
Q Consensus 302 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~ 379 (435)
|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||..... .... ..
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~----~~ 257 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN----QEVL----EF 257 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHH----HH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH----HHHH----HH
Confidence 7887765432221 12233567899999999888889999999999999999999 8888753211 1111 11
Q ss_pred hccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 380 MKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
+....... .... ....+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 258 ~~~~~~~~-----~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 258 VTSGGRMD-----PPKN----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHTTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcCCCCC-----CCCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 11111100 0011 1235678889999999999999999999998753
No 125
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=278.98 Aligned_cols=220 Identities=23% Similarity=0.250 Sum_probs=167.1
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--ccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--QGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+|++.+.||+|+||+||+|+.. +++.||||++..... .....+..|+..+.++ +|||||+++++|..++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57899999999999999999876 689999999864322 2334556666666555 9999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
||+ +|+|.+++.... ..+++..+..++.+++.||+|||+ |||+++.....
T Consensus 137 e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 779998887653 358999999999999999999995 99998765432
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
.......||++|+|||++.+ .++.++|||||||++|||++|..|+.... . ...+...... +...
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-------~----~~~~~~~~~~----~~~~ 274 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-------G----WQQLRQGYLP----PEFT 274 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-------H----HHHHTTTCCC----HHHH
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-------H----HHHHhccCCC----cccc
Confidence 22334579999999998876 68999999999999999999987753210 0 1112111111 1111
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. ....+.+++.+||+.||++|||+.|+++
T Consensus 275 ~~----~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 AG----LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cC----CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11 1235678889999999999999999985
No 126
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-35 Score=277.94 Aligned_cols=233 Identities=26% Similarity=0.363 Sum_probs=177.8
Q ss_pred cCcceeeeecccCcceEEEEEcCC-C---CEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee-EE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLPD-G---KTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK-LL 256 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~-~l 256 (435)
..|...+.||+|+||.||+|++.+ + ..||+|.+..... ...+.|.+|++++++++|||||++++++...+.. ++
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 345677999999999999998532 2 3799999875433 3456799999999999999999999999876655 99
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+.+|+|.+++... ...+++..+..++.+++.||+|||+ |||+++.....
T Consensus 101 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp EECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EEecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999999999763 2347888999999999999999996 99999765432
Q ss_pred C---ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 313 E---THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 313 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
. ........||+.|+|||...+..++.++|||||||++|||+||+.|+..... .......+.. ... ..
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~---~~~~~~~~~~----~~~--~~ 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID---PFDLTHFLAQ----GRR--LP 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC---GGGHHHHHHT----TCC--CC
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC---HHHHHHHhhc----CCC--CC
Confidence 2 1122345688999999999998999999999999999999997776543222 2222222211 110 00
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.+. .....+.+++.+||+.||++|||+.++++.|++++
T Consensus 249 ~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 249 QPE-------YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp CCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCc-------cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111 11135678889999999999999999999999875
No 127
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=286.32 Aligned_cols=225 Identities=23% Similarity=0.355 Sum_probs=172.5
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccc---ccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQA---KTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 255 (435)
...+|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+.+|..++..+ +|||||++++++...+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3467999999999999999999865 5899999999753 233456788999999988 7999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+|||||++|+|..++.... .+++.....++.+++.||+|||+ |||+++....
T Consensus 101 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999997643 48899999999999999999996 9999975432
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
. .......+||+.|+|||++.+..++.++||||+||++|||+||+.||..... ..+ ...+..... .-|
T Consensus 177 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~----~~~----~~~i~~~~~---~~p 244 (353)
T 3txo_A 177 N-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE----DDL----FEAILNDEV---VYP 244 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHCCC---CCC
T ss_pred C-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH----HHH----HHHHHcCCC---CCC
Confidence 2 2233456899999999999888899999999999999999999999864321 111 222221111 111
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCH------HHHHH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTM------LHVLK 428 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~------~evl~ 428 (435)
.. ....+.+++.+||+.||++||++ .||++
T Consensus 245 ~~-------~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TW-------LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TT-------SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC-------CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 11246678889999999999998 66653
No 128
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.5e-36 Score=281.22 Aligned_cols=240 Identities=24% Similarity=0.323 Sum_probs=164.6
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
.+|++.+.||+|+||.||+|... +++.||||.++.... ...+.+.+|++++++++|||||++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 57889999999999999999865 588999999865432 3346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhC--CCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 261 MVNGSLDLWLRNAT--GSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 261 ~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
++ |+|.+++.... .....+++.....++.|+++||+|||+ |||+++......
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV- 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC-
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc-
Confidence 98 69999887542 122358889999999999999999996 999998754321
Q ss_pred cccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC---cc--
Q 040641 315 HVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD---DV-- 388 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 388 (435)
.......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+.......... ..
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND----EEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCChhHhhhhhh
Confidence 22334678999999998865 4689999999999999999999999864322 11222222221111000 00
Q ss_pred ---ccccc---cCCCC---------HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 389 ---LDPTV---LNAGS---------KPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 389 ---~~~~~---~~~~~---------~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..+.. ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 00000 011235778899999999999999999874
No 129
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=283.18 Aligned_cols=228 Identities=21% Similarity=0.323 Sum_probs=171.3
Q ss_pred cccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCCC--CCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKH--QNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~l 256 (435)
...+|++.+.||+|+||.||+|...+++.||||++.... ....+.|.+|++++.+++| ||||++++++..++..++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 345789999999999999999998889999999986433 2334678999999999987 999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------cccccccccccC
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------DFGLARLISACE 313 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------DfGla~~~~~~~ 313 (435)
||| +.+|+|.+++... ..+++..+..++.|+++||+|||+ |||+++......
T Consensus 87 v~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EEC-CCSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC----
T ss_pred EEe-CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCccc
Confidence 999 5688999999764 248889999999999999999996 999998765432
Q ss_pred c-cccccccccCCCcCCcCCCC-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhc
Q 040641 314 T-HVSTDIAGTLGYIPPEYGQS-----------RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMK 381 (435)
Q Consensus 314 ~-~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 381 (435)
. ......+||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ..........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~ 235 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAIID 235 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh------HHHHHHHHhc
Confidence 2 12345689999999998643 6789999999999999999999999854221 1111222221
Q ss_pred cCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 382 KQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
...... .+. .. ...+.+++..||+.||++|||+.|+++
T Consensus 236 ~~~~~~--~~~---~~----~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 236 PNHEIE--FPD---IP----EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp TTSCCC--CCC---CS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCcccC--Ccc---cC----CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 111100 011 11 124668889999999999999999975
No 130
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1e-35 Score=288.48 Aligned_cols=227 Identities=20% Similarity=0.325 Sum_probs=172.2
Q ss_pred ccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCC--CCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVK--HQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lv 257 (435)
...|++.+.||+|+||.||+|...+++.||||.+.... ....+.+.+|++++++++ |||||++++++...+..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 34699999999999999999998889999999986433 234567999999999996 59999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------cccccccccccCc
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------DFGLARLISACET 314 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------DfGla~~~~~~~~ 314 (435)
|| +.+|+|.+++.... .+++..+..++.|++.||+|||+ |||+++.......
T Consensus 135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC-----
T ss_pred Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCc
Confidence 99 57899999997642 47888899999999999999996 9999987653322
Q ss_pred -cccccccccCCCcCCcCCCC-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhcc
Q 040641 315 -HVSTDIAGTLGYIPPEYGQS-----------RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKK 382 (435)
Q Consensus 315 -~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 382 (435)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...........
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~~~~~~ 283 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAIIDP 283 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHCT
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHHHHHhCc
Confidence 22345689999999998754 4688999999999999999999999854221 11112222211
Q ss_pred CCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 383 QQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..... .|.. . ...+.+++.+||+.||++|||+.||++
T Consensus 284 ~~~~~--~~~~---~----~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 284 NHEIE--FPDI---P----EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp TSCCC--CCCC---S----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccCC--CCcc---c----hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 11000 0111 1 124678889999999999999999974
No 131
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.9e-35 Score=280.07 Aligned_cols=225 Identities=24% Similarity=0.323 Sum_probs=167.4
Q ss_pred cccCcceeeeecccCcceEEEEEc----CCCCEEEEEEccccc----cccHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL----PDGKTVAVKKFSQAK----TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
...+|++.+.||+|+||.||+|+. .+++.||+|.++... ......+.+|+.++++++|||||++++++...+
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 346899999999999999999986 468999999997542 223456889999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||+ |||+++.
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 9999999999999999997642 47888899999999999999996 8999875
Q ss_pred ccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 309 ISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..+......
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~----~~i~~~~~~-- 239 (327)
T 3a62_A 171 SIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR----KKTI----DKILKCKLN-- 239 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHH----HHHHHTCCC--
T ss_pred cccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH----HHHH----HHHHhCCCC--
Confidence 43221 223456799999999999888899999999999999999999999854321 1111 111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHH
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRP-----TMLHVLK 428 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----s~~evl~ 428 (435)
. |. . ....+.+++.+||+.||++|| ++.|+++
T Consensus 240 ~-p~----~---~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 240 L-PP----Y---LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp C-CT----T---SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred C-CC----C---CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 0 11 0 113567788999999999999 7777764
No 132
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=275.18 Aligned_cols=225 Identities=23% Similarity=0.383 Sum_probs=156.5
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 45789999999999999999986 468999999986432 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|.+++... ...+++.....++.|+++||+|||+ |||+++......
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999753 2358899999999999999999996 899887654221
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.......||+.|+|||...+..++.++||||||+++|||+||+.||...... ... .... ..+...|.
T Consensus 167 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~----~~~~---~~~~~~~~- 233 (278)
T 3cok_A 167 -EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK----NTL----NKVV---LADYEMPS- 233 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CC---SSCCCCCT-
T ss_pred -CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH----HHH----HHHh---hcccCCcc-
Confidence 1223457999999999998888999999999999999999999998643211 110 0010 01111111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.++++
T Consensus 234 --~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 --F----LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --T----SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --c----cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1 1235678899999999999999999875
No 133
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.1e-35 Score=281.38 Aligned_cols=227 Identities=19% Similarity=0.296 Sum_probs=174.2
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc---ccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT---QGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 256 (435)
..+|++.+.||+|+||.||+|+.. +++.||+|.++.... ...+.+.+|..++.++ +|||||++++++...+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 457899999999999999999865 588999999975432 2345688999999887 89999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|..++.... .+++.....++.+++.||+|||+ |||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999997642 48889999999999999999996 99999764322
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccC-CcHHHHHHHHhccCCCCccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEG-ANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+...+...... -|
T Consensus 164 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~---~p 239 (345)
T 3a8x_A 164 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR---IP 239 (345)
T ss_dssp -TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC---CC
T ss_pred -CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC---CC
Confidence 12234568999999999999999999999999999999999999998542111110 11112222222222111 01
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTM 423 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~ 423 (435)
. . ....+.+++.+||+.||++||++
T Consensus 240 ~---~----~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 240 R---S----LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp T---T----SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred C---C----CCHHHHHHHHHHhcCCHhHCCCC
Confidence 1 1 12346678889999999999995
No 134
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.6e-36 Score=278.10 Aligned_cols=234 Identities=24% Similarity=0.302 Sum_probs=177.9
Q ss_pred cccccCcceee-eecccCcceEEEEEc---CCCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 179 QQPLLKLTLVD-ILEDGGFGTVYKATL---PDGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 179 ~~~~~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
.....+|.+.+ .||+|+||.||+|.+ .+++.||||.++.... ...+.|.+|++++++++||||+++++++ ..+
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 34556788888 999999999999954 2467899999975432 2356799999999999999999999999 567
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++||||+++|+|.+++... ..+++.....++.++++||+|||+ |||+++.
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CcEEEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 789999999999999999763 248889999999999999999996 8999887
Q ss_pred ccccCcc--ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 309 ISACETH--VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 309 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
....... ......||+.|+|||...+..++.++||||||+++|||+| |+.||..... ..+ ...+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~----~~~~~~~~~ 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SEV----TAMLEKGER 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHH----HHHHHTTCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH----HHH----HHHHHcCCC
Confidence 6443221 1223456789999999888888999999999999999999 9999854211 111 122221111
Q ss_pred CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 386 DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. .... .....+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 239 ~-----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 239 M-----GCPA----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp C-----CCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred C-----CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 0111 11235678899999999999999999999999874
No 135
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.5e-35 Score=275.16 Aligned_cols=237 Identities=18% Similarity=0.225 Sum_probs=180.2
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEE-EeCCeeEEEEe
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYC-SFDEEKLLVYE 259 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~e 259 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+..... ...+.+|+.++++++|+|++..++++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 35799999999999999999985 5689999999865332 34688999999999998877776666 56677899999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISAC 312 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~ 312 (435)
|+ +|+|.+++.... ..+++..+..++.|++.||+|||+ |||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 999999997532 348999999999999999999995 89998876543
Q ss_pred Ccc------ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 313 ETH------VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 313 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
... ......||+.|+|||...+..++.++|||||||++|||+||+.||....... .......+.........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT-KRQKYERISEKKMSTPI- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-SSSHHHHHHHHHHHSCH-
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh-hhhhhhhhcccccCCch-
Confidence 221 1245679999999999999899999999999999999999999986532221 12222222111111100
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
... ... ....+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 240 ~~~----~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 240 EVL----CKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHH----TTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred HHH----Hhh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 000 001 1135678899999999999999999999999874
No 136
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.3e-36 Score=283.84 Aligned_cols=224 Identities=21% Similarity=0.338 Sum_probs=176.3
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 255 (435)
...+|++.+.||+|+||.||+|+.. +++.||||.++... ......+..|..++..+ +|||||++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3468999999999999999999875 58899999997542 23456788899999876 9999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|.+++.... .+++.....++.|++.||+|||+ |||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999997642 48889999999999999999996 9999986432
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+ ...+..... .-|
T Consensus 171 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~----~~~i~~~~~---~~p 238 (345)
T 1xjd_A 171 GD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE----EEL----FHSIRMDNP---FYP 238 (345)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHCCC---CCC
T ss_pred CC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH----HHH----HHHHHhCCC---CCC
Confidence 21 223457899999999999998999999999999999999999999854321 111 122221111 011
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHH-HHH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTML-HVL 427 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~-evl 427 (435)
.. ....+.+++.+||+.||++||++. +|+
T Consensus 239 ~~-------~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 RW-------LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TT-------SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred cc-------cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 113466788999999999999987 554
No 137
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.9e-36 Score=278.16 Aligned_cols=222 Identities=25% Similarity=0.420 Sum_probs=176.4
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEe-----------
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSF----------- 250 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----------- 250 (435)
.+|++.+.||+|+||.||+|+.. +++.||+|.+.... ..+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 46889999999999999999875 68999999986533 356789999999999999999998854
Q ss_pred -----CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------
Q 040641 251 -----DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------ 301 (435)
Q Consensus 251 -----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------ 301 (435)
....++||||+++|+|.+++.... ...+++..+..++.++++||.|||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence 345799999999999999997643 2358899999999999999999996
Q ss_pred cccccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhc
Q 040641 302 DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMK 381 (435)
Q Consensus 302 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 381 (435)
|||+++...... ......||+.|+|||...+..++.++||||||+++|||+||..|+... ........
T Consensus 165 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~~~~ 232 (284)
T 2a19_B 165 DFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFTDLR 232 (284)
T ss_dssp CCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHHHHH
T ss_pred cchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHHHhh
Confidence 899987765422 223457999999999998888999999999999999999999885311 01111222
Q ss_pred cCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 382 KQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
....... . ...+.+++.+||+.||++|||+.|+++.|..+.
T Consensus 233 ~~~~~~~--------~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 233 DGIISDI--------F----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp TTCCCTT--------S----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred ccccccc--------C----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 2111111 1 124567888999999999999999999998764
No 138
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.8e-36 Score=283.44 Aligned_cols=245 Identities=26% Similarity=0.351 Sum_probs=173.3
Q ss_pred cccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHH--HHhccCCCCCceeEEEEEEe-----C
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEM--ETLGKVKHQNLVLLLGYCSF-----D 251 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~H~niv~l~g~~~~-----~ 251 (435)
.....+|++.+.||+|+||.||+|+. +++.||||++.... ...+..|. ..+..++||||+++++++.. .
T Consensus 9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 9 SLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp CCCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred CcChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 34557899999999999999999987 57899999986433 23444444 44566899999999986643 2
Q ss_pred CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceee-----------c-------------------
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLH-----------Q------------------- 301 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH-----------~------------------- 301 (435)
...++||||+++|+|.+++.... .++.....++.|+++||+||| .
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred ceEEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 35689999999999999997542 478889999999999999998 2
Q ss_pred ---cccccccccccC-------ccccccccccCCCcCCcCCCC-------CCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 040641 302 ---DFGLARLISACE-------THVSTDIAGTLGYIPPEYGQS-------RMSTTRGDVYSFGVILLELVTAKEPTGPEF 364 (435)
Q Consensus 302 ---DfGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~SfGvil~El~tg~~p~~~~~ 364 (435)
|||+++.+.... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.|+.+..
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 899997654321 112234579999999998876 456778999999999999999988765432
Q ss_pred ccccCCcH----------HHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 365 QEKEGANL----------VGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 365 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
........ ................+.. ...........+.+++.+||+.||++|||+.||++.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE--AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT--TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCc--ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 21111100 0001111111111111111 11112335557889999999999999999999999999875
No 139
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-35 Score=291.85 Aligned_cols=223 Identities=23% Similarity=0.359 Sum_probs=177.9
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|.+.+.||+|+||.||+|+.. +|+.||||.+.... ......+.+|+++++.++|||||++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357899999999999999999865 68999999996542 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|.+++... ..+++.....++.|++.||+|||+ |||+++.....
T Consensus 95 ~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~- 169 (476)
T 2y94_A 95 MEYVSGGELFDYICKN----GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG- 169 (476)
T ss_dssp EECCSSEEHHHHTTSS----SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT-
T ss_pred EeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc-
Confidence 9999999999998643 348899999999999999999996 99999876532
Q ss_pred ccccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ..+ ...+..... ..|.
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~----~~~i~~~~~---~~p~ 237 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV----PTL----FKKICDGIF---YTPQ 237 (476)
T ss_dssp -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS----HHH----HHHHHTTCC---CCCT
T ss_pred -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH----HHH----HHHHhcCCc---CCCc
Confidence 22345689999999999887765 6899999999999999999999864321 111 122221111 0111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.||++
T Consensus 238 ~-------~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 238 Y-------LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp T-------CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c-------CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1 1124677889999999999999999985
No 140
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3e-35 Score=278.01 Aligned_cols=226 Identities=20% Similarity=0.253 Sum_probs=176.8
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccc------cHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQ------GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
.+|++.+.||+|+||.||+|+.. +|+.||||.+...... ..+.+.+|+.++++++||||+++++++...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 46899999999999999999865 5889999998653321 3567999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------cccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLAR 307 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla~ 307 (435)
+||||+++|+|.+++... ..+++.....++.|++.||+|||+ |||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 999999999999999753 347889999999999999999995 788877
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
..... .......||+.|+|||...+..++.++|||||||++|||+||+.||..... ... ...+.....
T Consensus 168 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~-~~~i~~~~~-- 235 (321)
T 2a2a_A 168 EIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QET-LANITSVSY-- 235 (321)
T ss_dssp ECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHH-HHHHHTTCC--
T ss_pred ecCcc--ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-------HHH-HHHHHhccc--
Confidence 65432 122345799999999999888999999999999999999999999854321 111 111111110
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..++...... ...+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0111111111 124678899999999999999999985
No 141
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-35 Score=277.61 Aligned_cols=230 Identities=23% Similarity=0.364 Sum_probs=172.9
Q ss_pred ccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+..+|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|++++++++||||+++++++...+..++||
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 34568999999999999999999975 58899999997666666788999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET 314 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~ 314 (435)
||+++|+|.+++.... ..+++.....++.++++||.|||+ |||++...... .
T Consensus 96 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 171 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-L 171 (302)
T ss_dssp ECCTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-H
T ss_pred EeCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-c
Confidence 9999999999987642 348899999999999999999996 78876543211 1
Q ss_pred cccccccccCCCcCCcCC-----CCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 315 HVSTDIAGTLGYIPPEYG-----QSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~-----~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
.......||+.|+|||+. ....++.++||||||+++|||+||+.||..... ......... .......
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~-~~~~~~~ 243 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAK-SDPPTLL 243 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHH-SCCCCCS
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHHHhc-cCCcccC
Confidence 112335789999999986 467789999999999999999999999854211 111111111 1111111
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.+. .....+.+++.+||+.||++|||+.++++
T Consensus 244 ~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 TPS-------KWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SGG-------GSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred Ccc-------ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111 11235678889999999999999999874
No 142
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=292.07 Aligned_cols=233 Identities=19% Similarity=0.172 Sum_probs=177.7
Q ss_pred cccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 254 (435)
.....+|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|..++..++|||||++++++.+.+..
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 345578999999999999999999875 68999999996532 22334588999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++|||||++|+|.+++.... ..+++.....++.+++.||+|||+ |||+++...
T Consensus 137 ~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~ 213 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213 (412)
T ss_dssp EEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheecc
Confidence 99999999999999997642 248888999999999999999996 999998765
Q ss_pred ccCccccccccccCCCcCCcCCC-------CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccC
Q 040641 311 ACETHVSTDIAGTLGYIPPEYGQ-------SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQ 383 (435)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 383 (435)
..........+||+.|+|||++. ...++.++|||||||++|||+||+.||..... ......+.......
T Consensus 214 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----~~~~~~i~~~~~~~ 289 (412)
T 2vd5_A 214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST----AETYGKIVHYKEHL 289 (412)
T ss_dssp TTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTHHHHC
T ss_pred CCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH----HHHHHHHHhcccCc
Confidence 44333334568999999999876 45789999999999999999999999864321 11111111100000
Q ss_pred CCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCC---CCHHHHHH
Q 040641 384 QADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATR---PTMLHVLK 428 (435)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R---Ps~~evl~ 428 (435)
. .|... . .....+.+++.+||. +|++| |++.||++
T Consensus 290 ~-----~p~~~-~---~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 290 S-----LPLVD-E---GVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp C-----CC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred C-----CCccc-c---CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0 01100 0 112356778889998 99998 68988864
No 143
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.7e-35 Score=271.64 Aligned_cols=226 Identities=23% Similarity=0.295 Sum_probs=177.2
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 57899999999999999999865 58899999986543 2334678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISAC 312 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~ 312 (435)
|+++|+|.+++... ..+++.....++.+++.||+|||+ |||++......
T Consensus 86 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 86 LVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred cCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 99999998888764 248889999999999999999995 88888665432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
.......||+.|+|||...+..++.++||||||+++|||++|+.||..... ... ...+...... ...+.
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~----~~~~~~~~~~-~~~~~ 230 (284)
T 3kk8_A 162 --EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRL----YAQIKAGAYD-YPSPE 230 (284)
T ss_dssp --CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHTCCC-CCTTT
T ss_pred --ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch----hHH----HHHHHhcccc-CCchh
Confidence 222346799999999999998999999999999999999999999854321 111 1111111110 01111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.......+.+++.+||+.||++|||+.|+++
T Consensus 231 -----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 -----WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0111235678888999999999999999975
No 144
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.6e-36 Score=276.58 Aligned_cols=231 Identities=26% Similarity=0.391 Sum_probs=173.9
Q ss_pred ccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeC-CeeEE
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD-EEKLL 256 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~l 256 (435)
|.....+|++.+.||+|+||.||+|... |+.||||.++... ..+.|.+|++++++++||||+++++++... +..++
T Consensus 16 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 16 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred ccCChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 4456678999999999999999999874 7899999997533 456799999999999999999999997654 47899
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|.+++.... ...+++.....++.++++||+|||+ |||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp EECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred EEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 999999999999997542 1237888899999999999999996 88888754322
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
.....+|+.|+|||...+..++.++||||||+++|||+| |+.||..... .... ..+..... +
T Consensus 171 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~----~~~~----~~~~~~~~-----~ 233 (278)
T 1byg_A 171 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVV----PRVEKGYK-----M 233 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG----GGHH----HHHTTTCC-----C
T ss_pred ----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH----HHHH----HHHhcCCC-----C
Confidence 123467889999999888889999999999999999999 9988754321 1121 11211110 1
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..... ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 234 ~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 234 DAPDG----CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCccc----CCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 11111 1235677889999999999999999999999874
No 145
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.5e-35 Score=285.58 Aligned_cols=227 Identities=17% Similarity=0.202 Sum_probs=165.1
Q ss_pred cCccee-eeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHh-ccCCCCCceeEEEEEEe----CCeeE
Q 040641 183 LKLTLV-DILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETL-GKVKHQNLVLLLGYCSF----DEEKL 255 (435)
Q Consensus 183 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~ 255 (435)
.+|.+. ++||+|+||.||+|... +++.||||++.. ...+.+|+.++ +..+|||||++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 355555 78999999999999865 588999999853 24567888887 45589999999999865 56789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARL 308 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~ 308 (435)
+|||||++|+|.+++.... ...+++.....++.|++.||+|||+ |||+++.
T Consensus 136 lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 9999999999999997632 2358999999999999999999995 8999876
Q ss_pred ccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 309 ISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
.... ......+||+.|+|||++.+..++.++|||||||++|||+||+.||...............+. .... ..
T Consensus 214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~-~~ 286 (400)
T 1nxk_A 214 TTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQY-EF 286 (400)
T ss_dssp CC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCC-CC
T ss_pred cCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCcc-cC
Confidence 5432 223456899999999999999999999999999999999999999865432211111222111 1111 00
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..+. .......+.+++.+||+.||++|||+.||++
T Consensus 287 ~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 287 PNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0110 1112235678899999999999999999986
No 146
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9.8e-36 Score=306.17 Aligned_cols=237 Identities=21% Similarity=0.324 Sum_probs=180.1
Q ss_pred cccccccCcceeeeecccCcceEEEEEcCC----CCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeC
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLPD----GKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFD 251 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 251 (435)
.+.....+|++.+.||+|+||.||+|.+.. +..||||.+..... ...+.|.+|+.++++++|||||+++|++. +
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 345566789999999999999999998642 45799999875432 33467999999999999999999999984 5
Q ss_pred CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccc
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLAR 307 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~ 307 (435)
+..++||||+++|+|.++++... ..+++..+..++.|+++||+|||+ |||+++
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 67899999999999999997542 348899999999999999999996 999998
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
..............||+.|+|||++.+..++.++|||||||++|||++ |..||..... ...... +......
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~----~~~~~~----i~~~~~~ 611 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIGR----IENGERL 611 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHH----HHHTCCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH----HHHHHH----HHcCCCC
Confidence 765433333344567889999999888889999999999999999997 8888753211 112211 1111110
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ... .....+.+++.+||+.||++|||+.+|++.|++++
T Consensus 612 ~-----~~~----~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 612 P-----MPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp C-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C-----CCc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0 001 11235678899999999999999999999999875
No 147
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.1e-35 Score=274.25 Aligned_cols=225 Identities=22% Similarity=0.331 Sum_probs=173.7
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEecc
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEYM 261 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 261 (435)
.+|.+.+.||+|+||.||+|+.. +|+.||+|.+........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 47889999999999999999865 68999999997655444567899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccccCc
Q 040641 262 VNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISACET 314 (435)
Q Consensus 262 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~~~ 314 (435)
++|+|.+++.... .+++.....++.+++.||+|||+ |||+++.....
T Consensus 89 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-- 162 (304)
T 2jam_A 89 SGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-- 162 (304)
T ss_dssp CSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--
T ss_pred CCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--
Confidence 9999999887642 47889999999999999999995 77777653321
Q ss_pred cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 315 HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
......||+.|+|||...+..++.++|||||||++|||++|+.||..... ..+ ...+...... . .....
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~----~~~i~~~~~~-~-~~~~~ 231 (304)
T 2jam_A 163 -IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE----SKL----FEKIKEGYYE-F-ESPFW 231 (304)
T ss_dssp -TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH----HHH----HHHHHHCCCC-C-CTTTT
T ss_pred -ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHH----HHHHHcCCCC-C-Ccccc
Confidence 22335699999999999998999999999999999999999999854321 111 1122211110 0 00000
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
......+.+++.+||+.||++|||+.|+++
T Consensus 232 ----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 232 ----DDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ----TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111235678889999999999999999975
No 148
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.4e-35 Score=280.99 Aligned_cols=236 Identities=27% Similarity=0.426 Sum_probs=178.3
Q ss_pred ccccCcceeeeecccCcceEEEEEcC-CCCE--EEEEEccccc-cccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCee
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP-DGKT--VAVKKFSQAK-TQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 254 (435)
....+|++.+.||+|+||.||+|+.. ++.. ||||.+.... ....+.+.+|+++++++ +||||+++++++...+..
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 34568999999999999999999864 4554 5999886432 23446789999999999 999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhC------------CCCCCCCHHHHHHHHHHhhhccceeec---------------------
Q 040641 255 LLVYEYMVNGSLDLWLRNAT------------GSHEVLDRAKRYKIACSSARGLAFLHQ--------------------- 301 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------- 301 (435)
++||||+++|+|.+++.... .....+++.....++.|+++||+|||+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeE
Confidence 99999999999999997642 123468999999999999999999996
Q ss_pred ---cccccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHH
Q 040641 302 ---DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVF 377 (435)
Q Consensus 302 ---DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~ 377 (435)
|||+++..... .......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.... ... ..
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-------~~~-~~ 251 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-------CAE-LY 251 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-------HHH-HH
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc-------HHH-HH
Confidence 89988743321 12233467889999999888888999999999999999998 999985421 111 12
Q ss_pred HHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 378 QKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+..... +.... .....+.+++.+||+.||++|||+.|+++.|++++
T Consensus 252 ~~~~~~~~-----~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 252 EKLPQGYR-----LEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp HHGGGTCC-----CCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhhcCCC-----CCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22222110 00000 11235678889999999999999999999999875
No 149
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=288.65 Aligned_cols=238 Identities=17% Similarity=0.211 Sum_probs=178.8
Q ss_pred ccCcceeeeecccCcceEEEEEcCC---------CCEEEEEEccccccccHHHHHHHHHHhccCCCCCcee---------
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLPD---------GKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVL--------- 243 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~--------- 243 (435)
..+|++.+.||+|+||.||+|+... ++.||||.+... +.+.+|++++++++|||||+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4689999999999999999998753 789999998643 35789999999999999988
Q ss_pred ------EEEEEEe-CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------
Q 040641 244 ------LLGYCSF-DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------- 301 (435)
Q Consensus 244 ------l~g~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------- 301 (435)
+++++.. +...++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV 192 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE
Confidence 6778876 77889999999 999999998642 2458999999999999999999996
Q ss_pred -----------cccccccccccCcc------ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 040641 302 -----------DFGLARLISACETH------VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEF 364 (435)
Q Consensus 302 -----------DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~ 364 (435)
|||+++........ ......||+.|+|||+..+..++.++|||||||++|||+||+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 89999765432211 1234579999999999998899999999999999999999999985432
Q ss_pred ccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 365 QEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
... ..+... ....... .....++...... ....+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 273 ~~~--~~~~~~-~~~~~~~-~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 273 PNT--EDIMKQ-KQKFVDK-PGPFVGPCGHWIR---PSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp TCH--HHHHHH-HHHHHHS-CCCEECTTSCEEC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cCH--HHHHHH-HHhccCC-hhhhhhhccccCC---CcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 111 111111 1111111 1111111100001 1135678888999999999999999999999875
No 150
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5e-35 Score=279.27 Aligned_cols=222 Identities=19% Similarity=0.249 Sum_probs=178.0
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|++.+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|+++++.++|||||++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 3468999999999999999999865 68999999996542 2345678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|.+++.... .+++.....++.+++.||+|||+ |||+++.....
T Consensus 119 v~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999999998643 37889999999999999999996 99999865432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .. +...+...... -|.
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~-~~~~i~~~~~~---~p~ 259 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-------IQ-IYEKIVSGKVR---FPS 259 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HHHHHHHCCCC---CCT
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-------HH-HHHHHHcCCCC---CCC
Confidence 2346899999999999988999999999999999999999999854321 11 12222221110 011
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCC-----HHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPT-----MLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs-----~~evl~ 428 (435)
. ....+.+++.+||+.||++||+ +.||++
T Consensus 260 ---~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 260 ---H----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ---T----CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ---C----CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1 1235678889999999999998 788763
No 151
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=279.70 Aligned_cols=232 Identities=23% Similarity=0.381 Sum_probs=172.6
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCC----EEEEEEcccc-ccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGK----TVAVKKFSQA-KTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..+|++.+.||+|+||.||+|++. +++ .||+|.+... .....+.+.+|+.++++++|||||+++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467999999999999999999854 344 3578877543 2345678999999999999999999999998654 78
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+|+||+++|+|.+++.... ..+++.....++.|+++||+|||+ |||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 9999999999999997643 348889999999999999999996 9999987643
Q ss_pred cCc-cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 312 CET-HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 312 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
... .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||..... ..+...+ ...... .
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~----~~~~~~~----~~~~~~--~ 239 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----SEISSIL----EKGERL--P 239 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG----GGHHHHH----HTTCCC--C
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH----HHHHHHH----HcCCCC--C
Confidence 221 22233457889999999988889999999999999999999 9999854322 1222211 111100 0
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.+. .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 240 ~~~-------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 240 QPP-------ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp CCT-------TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCc-------cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 011 11225678889999999999999999999999875
No 152
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.1e-35 Score=274.39 Aligned_cols=236 Identities=17% Similarity=0.228 Sum_probs=176.9
Q ss_pred cCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEE-EeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYC-SFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~ey 260 (435)
.+|++.+.||+|+||.||+|+. .+++.||||.+..... ...+.+|+++++.++|+|++..++++ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 5799999999999999999985 5688999998654332 23578999999999998888777766 567778999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccccC
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISACE 313 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~~ 313 (435)
+ +|+|.+++.... ..+++..+..++.|++.||+|||+ |||+++......
T Consensus 87 ~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 87 L-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp C-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred c-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 9 999999987532 248999999999999999999995 899988765432
Q ss_pred c------cccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 314 T------HVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 314 ~------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
. .......||+.|+|||...+..++.++|||||||++|||+||+.||........ ......+......... .
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~-~ 240 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPI-E 240 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCH-H
T ss_pred cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhcccccchh-h
Confidence 2 122346799999999999998999999999999999999999999865332222 1222211111111100 0
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
.. ... ....+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 241 ~~----~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 241 VL----CKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HH----TTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hh----hcc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 00 000 1135678889999999999999999999999874
No 153
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-36 Score=286.28 Aligned_cols=231 Identities=21% Similarity=0.291 Sum_probs=177.0
Q ss_pred cccCcceeeeecccCcceEEEEEc----CCCCEEEEEEccccc----cccHHHHHHHHHHhccC-CCCCceeEEEEEEeC
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL----PDGKTVAVKKFSQAK----TQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFD 251 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 251 (435)
...+|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++.++ +||||+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 346899999999999999999986 368999999987532 22345677899999999 699999999999999
Q ss_pred CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccc
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLAR 307 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~ 307 (435)
+..++||||+++|+|.+++.... .+++.....++.|+++||+|||+ |||+++
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred ceEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999997643 47889999999999999999996 999998
Q ss_pred cccccCccccccccccCCCcCCcCCCC--CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQS--RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
.............+||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .............
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~-- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---SQAEISRRILKSE-- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC---CHHHHHHHHHHCC--
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc---hHHHHHHHHhccC--
Confidence 765433344455689999999998875 457899999999999999999999986432211 1111111111111
Q ss_pred CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 040641 386 DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRP-----TMLHVLKL 429 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----s~~evl~~ 429 (435)
+.... .....+.+++.+||+.||++|| ++.|+++.
T Consensus 283 -----~~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 -----PPYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp -----CCCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred -----CCCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11111 1123466788999999999999 99998753
No 154
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.7e-36 Score=277.10 Aligned_cols=232 Identities=21% Similarity=0.287 Sum_probs=177.0
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEe--CCeeEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSF--DEEKLL 256 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l 256 (435)
..+|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357899999999999999999865 68999999986533 2345679999999999999999999998854 567899
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------------cccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------------DFGLAR 307 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------------DfGla~ 307 (435)
||||+++|+|.+++.........+++.....++.+++.||+|||+ |||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 999999999999998654344558999999999999999998883 777776
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
...... .......||+.|+|||...+..++.++||||||+++|||+||+.||..... ..+. ..+.......
T Consensus 165 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~----~~i~~~~~~~ 235 (279)
T 2w5a_A 165 ILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ----KELA----GKIREGKFRR 235 (279)
T ss_dssp HC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHH----HHHHHTCCCC
T ss_pred eecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH----HHHH----HHHhhccccc
Confidence 554321 112335789999999998888899999999999999999999999854311 1111 1222221111
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHh
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLH 431 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~ 431 (435)
... .....+.+++.+||+.||++|||+.||++.+.
T Consensus 236 -----~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 -----IPY----RYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----CCc----ccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 111 11235678889999999999999999997654
No 155
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.2e-35 Score=291.46 Aligned_cols=225 Identities=18% Similarity=0.256 Sum_probs=168.8
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|++.+.||+|+||.||+|+.. +|+.||||.+.... ......+.+|+++++.++|||||+++++|...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 4567999999999999999999854 68999999997532 2334568899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLISA 311 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~~ 311 (435)
|||||++|+|..++.... .+++.....++.|+++||+|||+ |||+++....
T Consensus 226 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999987642 48899999999999999999994 8999876433
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
. .......+||+.|+|||++.+..++.++|||||||++|||+||+.||..... ..+. ..+...... -|
T Consensus 302 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~----~~i~~~~~~---~p 369 (446)
T 4ejn_A 302 D-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLF----ELILMEEIR---FP 369 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHH----HHHHHCCCC---CC
T ss_pred C-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH----HHHH----HHHHhCCCC---CC
Confidence 2 2223457899999999999889999999999999999999999999854321 1111 111111110 01
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRP-----TMLHVLK 428 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----s~~evl~ 428 (435)
. . ....+.+++.+||+.||++|| ++.|+++
T Consensus 370 ~---~----~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 370 R---T----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp T---T----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred c---c----CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1 1 113567888999999999999 9999874
No 156
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.3e-35 Score=271.16 Aligned_cols=226 Identities=21% Similarity=0.299 Sum_probs=173.6
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc------ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT------QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46889999999999999999875 589999999864321 13578999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------cccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLAR 307 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla~ 307 (435)
+||||+++++|.+++.... .+++.....++.+++.||+|||+ |||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997642 48899999999999999999995 777776
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
...... ......||+.|+|||...+..++.++||||||+++|||+||+.||..... .. ....+......
T Consensus 161 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~-~~~~~~~~~~~- 229 (283)
T 3bhy_A 161 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-------QE-TLTNISAVNYD- 229 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HH-HHHHHHTTCCC-
T ss_pred eccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-------HH-HHHHhHhcccC-
Confidence 543321 22345689999999999888999999999999999999999999854321 11 11111111100
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.++..... ....+.+++.+||+.||++|||+.|+++
T Consensus 230 -~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 -FDEEYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp -CCHHHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -Ccchhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 01110011 1124678899999999999999999986
No 157
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.7e-35 Score=294.68 Aligned_cols=227 Identities=22% Similarity=0.301 Sum_probs=178.3
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|.+.++||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++|||||++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467889999999999999999875 58999999996532 23456789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|..++.........+++.....++.|++.||+|||+ |||+++.+....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 99999999999998654334568999999999999999999996 999998765432
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
......+||+.|+|||++.+..++.++|||||||++|||+||+.||....... .... +...+...... -|.
T Consensus 344 -~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~---~~~~-~~~~i~~~~~~---~p~- 414 (543)
T 3c4z_A 344 -TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV---ENKE-LKQRVLEQAVT---YPD- 414 (543)
T ss_dssp -CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC---CHHH-HHHHHHHCCCC---CCT-
T ss_pred -cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch---hHHH-HHHHHhhcccC---CCc-
Confidence 22334689999999999999999999999999999999999999986532211 1111 12222111110 011
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTM 423 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~ 423 (435)
.....+.+++.+||+.||++||++
T Consensus 415 ------~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 415 ------KFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ------TSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ------ccCHHHHHHHHHhccCCHhHCCCC
Confidence 112356678889999999999976
No 158
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.9e-35 Score=291.55 Aligned_cols=225 Identities=22% Similarity=0.280 Sum_probs=176.1
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++|||||++++++...+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 57899999999999999999865 68999999986432 3345789999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISAC 312 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~ 312 (435)
||++|+|.+++.... .+++.....++.+++.||+|||+ |||+++.....
T Consensus 102 ~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 102 LYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 999999998887642 48889999999999999999995 89998765432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......+||+.|+|||++.+ .++.++||||+||++|||++|+.||..... ..+ ...+....... ..+.
T Consensus 178 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~----~~~i~~~~~~~-~~~~ 245 (486)
T 3mwu_A 178 --TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE----YDI----LKRVETGKYAF-DLPQ 245 (486)
T ss_dssp ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHTCCCS-CSGG
T ss_pred --CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHH----HHHHHhCCCCC-CCcc
Confidence 22345679999999999875 589999999999999999999999854321 111 12222111110 0011
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.......+.+++.+||+.||++|||+.|+++
T Consensus 246 -----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 246 -----WRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp -----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0111235678889999999999999999986
No 159
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.1e-35 Score=278.76 Aligned_cols=224 Identities=22% Similarity=0.288 Sum_probs=175.9
Q ss_pred cccCcceeeeecccCcceEEEEEcCC-CCEEEEEEccccc---cccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLPD-GKTVAVKKFSQAK---TQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 255 (435)
...+|++.+.||+|+||.||+|+... ++.||||.++... ....+.+.+|..++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 34679999999999999999998764 7899999997542 23456788999999988 8999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|.+++.... .+++.....++.+++.||+|||+ |||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999997642 48889999999999999999996 9999986432
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+ ...+...... -|
T Consensus 174 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~----~~~----~~~i~~~~~~---~p 241 (353)
T 2i0e_A 174 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DEL----FQSIMEHNVA---YP 241 (353)
T ss_dssp T-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHCCCC---CC
T ss_pred C-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH----HHH----HHHHHhCCCC---CC
Confidence 2 1223457899999999999999999999999999999999999999854321 111 2222211110 01
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCC-----HHHHH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPT-----MLHVL 427 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs-----~~evl 427 (435)
. .....+.+++.+||+.||++||+ +.+|+
T Consensus 242 ~-------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~ 275 (353)
T 2i0e_A 242 K-------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 275 (353)
T ss_dssp T-------TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred C-------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 1 11235677889999999999996 46665
No 160
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.3e-34 Score=269.61 Aligned_cols=225 Identities=24% Similarity=0.359 Sum_probs=171.7
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEe----CCe
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSF----DEE 253 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~ 253 (435)
....|.+.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++|||||++++++.. ...
T Consensus 24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 3456888999999999999999864 57899999986543 2345678999999999999999999999865 355
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLA 306 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla 306 (435)
.++||||+++|+|.+++... ..+++.....++.+++.||+|||+ |||++
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 89999999999999999764 247888999999999999999985 77877
Q ss_pred ccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 307 RLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
+.... .......||+.|+|||.+.+ .++.++||||+||++|||+||+.||..... ... ...........
T Consensus 180 ~~~~~---~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~-~~~~~~~~~~~ 248 (290)
T 1t4h_A 180 TLKRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQ-IYRRVTSGVKP 248 (290)
T ss_dssp GGCCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHH-HHHHHTTTCCC
T ss_pred ccccc---cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc------HHH-HHHHHhccCCc
Confidence 65432 12234579999999998764 589999999999999999999999854211 111 12222221111
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
...+. .. ...+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~----~~----~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ASFDK----VA----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGGG----CC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCC----CC----CHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11111 11 124678889999999999999999985
No 161
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.1e-35 Score=269.42 Aligned_cols=223 Identities=25% Similarity=0.402 Sum_probs=173.5
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|++.+.||+|+||.||+|... +++.||||.+.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3468999999999999999999865 57799999986432 2234678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|.+++.... .+++.....++.+++.||+|||+ |||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999987642 37889999999999999999996 88887554321
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .. ....+...... .|.
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~-~~~~~~~~~~~---~~~ 228 (279)
T 3fdn_A 163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QE-TYKRISRVEFT---FPD 228 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HH-HHHHHHHTCCC---CCT
T ss_pred ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-------HH-HHHHHHhCCCC---CCC
Confidence 22346799999999999988999999999999999999999999854221 11 11111111100 011
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.||++
T Consensus 229 ---~----~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 229 ---F----VTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp ---T----SCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ---c----CCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1 1124667889999999999999999985
No 162
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8e-35 Score=291.14 Aligned_cols=225 Identities=21% Similarity=0.280 Sum_probs=172.6
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+.+++.++|||||+++++|...+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46899999999999999999865 68899999986543 3345778999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISAC 312 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~ 312 (435)
||++|+|.+++.... .+++.....++.|+++||+|||+ |||+++.....
T Consensus 117 ~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 999999998887642 47888999999999999999995 89998776532
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......+||+.|+|||++. ..++.++||||+||++|||++|+.||..... ..+ ...+...... ...+.
T Consensus 193 --~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~----~~~i~~~~~~-~~~~~ 260 (494)
T 3lij_A 193 --KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD----QEI----LRKVEKGKYT-FDSPE 260 (494)
T ss_dssp --BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHTCCC-CCSGG
T ss_pred --ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH----HHH----HHHHHhCCCC-CCchh
Confidence 2234567999999999876 4689999999999999999999999854321 111 1222211111 01111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. . .....+.+++.+||+.||++|||+.|+++
T Consensus 261 ~-~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 261 W-K----NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp G-T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c-c----cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1 1 11235678889999999999999999874
No 163
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=280.88 Aligned_cols=237 Identities=22% Similarity=0.301 Sum_probs=170.5
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccc--cHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQ--GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 47889999999999999999875 5899999998654322 34668899999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCcc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACETH 315 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~~ 315 (435)
|+++++|..++... ..+++.....++.++++||+|||+ |||+++...... .
T Consensus 83 ~~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-D 157 (311)
T ss_dssp CCSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-c
Confidence 99999999887643 348889999999999999999995 899987754322 2
Q ss_pred ccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhcc-----------C
Q 040641 316 VSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKK-----------Q 383 (435)
Q Consensus 316 ~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~ 383 (435)
......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...... .....+...... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV----DQLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhcccccccccccccc
Confidence 2234579999999998765 67899999999999999999999998543221 111111111100 0
Q ss_pred ---CCCccccccccCC---CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 384 ---QADDVLDPTVLNA---GSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 384 ---~~~~~~~~~~~~~---~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
......++..... ........+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000111110000 00012234678899999999999999999984
No 164
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.3e-36 Score=285.22 Aligned_cols=226 Identities=18% Similarity=0.222 Sum_probs=173.8
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+..... .+.+|++++.++ +|||||++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 56899999999999999999865 588999999965433 235688888887 799999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------ccccccccccc
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLARLISAC 312 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla~~~~~~ 312 (435)
|++|+|.+++... ..+++.....++.+++.||+|||+ |||+++.....
T Consensus 98 ~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 98 MKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp CCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred CCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 9999999988753 248899999999999999999996 88988765432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... .+...+...... ....
T Consensus 174 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~-~~~~~i~~~~~~--~~~~ 245 (342)
T 2qr7_A 174 N-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD----DTPE-EILARIGSGKFS--LSGG 245 (342)
T ss_dssp T-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT----SCHH-HHHHHHHHCCCC--CCST
T ss_pred C-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc----CCHH-HHHHHHccCCcc--cCcc
Confidence 2 223456899999999998877789999999999999999999999864211 1111 122222222111 0000
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .......+.+++.+||+.||++|||+.|+++
T Consensus 246 ~----~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 246 Y----WNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp T----TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred c----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 0111235677888999999999999999874
No 165
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.4e-35 Score=282.19 Aligned_cols=175 Identities=25% Similarity=0.353 Sum_probs=149.8
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
...+|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|||||++++++..++..++||
T Consensus 31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 3467999999999999999999865 68899999987543 234567999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccccccccccC
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLISACE 313 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~~~~ 313 (435)
||+++|+|.+++.... .+++.....++.+++.||+|||+ |||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 185 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 185 (360)
T ss_dssp CCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred ECCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence 9999999999997643 47888999999999999999985 88888654321
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGP 362 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~ 362 (435)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 22345799999999999998999999999999999999999999864
No 166
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.2e-35 Score=278.26 Aligned_cols=243 Identities=21% Similarity=0.339 Sum_probs=160.2
Q ss_pred ccccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
+.....+|++.+.||+|+||.||+|... +++.||||.+.... ....+++.+|++++++++||||+++++++...+..+
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 3455678999999999999999999864 68899999986543 234567889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhC----CCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccc
Q 040641 256 LVYEYMVNGSLDLWLRNAT----GSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLAR 307 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~----~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~ 307 (435)
+||||+++|+|.+++.... .....+++.....++.|+++||+|||+ |||+++
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 9999999999999987421 123458999999999999999999995 888887
Q ss_pred cccccCc----cccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhcc
Q 040641 308 LISACET----HVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKK 382 (435)
Q Consensus 308 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 382 (435)
....... .......||+.|+|||.... ..++.++|||||||++|||+||+.||..... .............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~ 245 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP----MKVLMLTLQNDPP 245 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG----GGHHHHHHTSSCC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch----hhHHHHHhccCCC
Confidence 6543211 11234579999999998765 5688999999999999999999999864321 1111111110000
Q ss_pred CCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 383 QQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.......++...... ...+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 246 SLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000111111111111 234677889999999999999999985
No 167
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=282.25 Aligned_cols=240 Identities=22% Similarity=0.343 Sum_probs=181.1
Q ss_pred ccccccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeC
Q 040641 174 NISMFQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD 251 (435)
Q Consensus 174 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 251 (435)
....+..+..+|++.+.||+|+||.||+|...+ .||+|.++... ....+.|.+|+.++++++||||+++++++...
T Consensus 24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 445667778899999999999999999998753 59999986532 22345688999999999999999999999999
Q ss_pred CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------ccccccc
Q 040641 252 EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------DFGLARL 308 (435)
Q Consensus 252 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------DfGla~~ 308 (435)
+..++||||+++|+|.+++... ...+++.....++.++++||+|||+ |||+++.
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSI 178 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC-
T ss_pred CceEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccc
Confidence 9999999999999999999753 2358889999999999999999996 8998876
Q ss_pred ccccC----ccccccccccCCCcCCcCCCC---------CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHH
Q 040641 309 ISACE----THVSTDIAGTLGYIPPEYGQS---------RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGW 375 (435)
Q Consensus 309 ~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~ 375 (435)
..... ........||+.|+|||.... ..++.++|||||||++|||+||+.||..... ..
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~- 250 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA-------EA- 250 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH-------HH-
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HH-
Confidence 43211 112233568999999998754 4578899999999999999999999854221 11
Q ss_pred HHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 376 VFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
....+............ ....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~--------~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 251 IIWQMGTGMKPNLSQIG--------MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp HHHHHHTTCCCCCCCSS--------CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred HHHHhccCCCCCCCcCC--------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 11112111111111100 1124668889999999999999999999999874
No 168
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=273.57 Aligned_cols=232 Identities=21% Similarity=0.296 Sum_probs=172.4
Q ss_pred ccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.....+....+||+|+||.||+|.. .+++.||||.+........+.+.+|+.+++.++|||||++++++...+..++||
T Consensus 19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 3344555666999999999999985 468899999997665555678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccccccccccC
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLISACE 313 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~~~~ 313 (435)
||+++|+|.+++..... ...+++.....++.++++||+|||+ |||+++......
T Consensus 99 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp ECCSEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred EeCCCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999999976432 2346788888899999999999996 888887654321
Q ss_pred ccccccccccCCCcCCcCCCCC--CCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSR--MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~--~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
.......||+.|+|||+..+. .++.++||||||+++|||+||+.||..... . ... ........ ..+
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~-~~~-~~~~~~~~-----~~~ 245 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE----P-QAA-MFKVGMFK-----VHP 245 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS----H-HHH-HHHHHHHC-----CCC
T ss_pred -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc----h-hHH-HHhhcccc-----ccc
Confidence 122345799999999987654 378999999999999999999999853211 0 111 11110000 011
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..... ....+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 246 EIPES----MSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCTT----SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccc----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111 1235677889999999999999999974
No 169
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6e-35 Score=280.74 Aligned_cols=222 Identities=20% Similarity=0.287 Sum_probs=166.2
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc---ccHHHHHHHHHH-hccCCCCCceeEEEEEEeCCeeEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT---QGHRQFTAEMET-LGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
..+|++.+.||+|+||.||+|+.. +++.||||.++.... .....+.+|..+ ++.++|||||++++++...+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 457999999999999999999865 578999999965432 233456778777 578999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|..++.... .+++.....++.+++.||+|||+ |||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999997642 47788888999999999999996 99999864322
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+ +..+...... ..+
T Consensus 193 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~----~~~----~~~i~~~~~~--~~~- 260 (373)
T 2r5t_A 193 -NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT----AEM----YDNILNKPLQ--LKP- 260 (373)
T ss_dssp -CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH----HHH----HHHHHHSCCC--CCS-
T ss_pred -CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH----HHH----HHHHHhcccC--CCC-
Confidence 2233457899999999999999999999999999999999999999864321 111 1222111110 111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHV 426 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~ev 426 (435)
. ....+.+++.+||+.||++||++.+.
T Consensus 261 ----~---~~~~~~~li~~lL~~dp~~R~~~~~~ 287 (373)
T 2r5t_A 261 ----N---ITNSARHLLEGLLQKDRTKRLGAKDD 287 (373)
T ss_dssp ----S---SCHHHHHHHHHHTCSSGGGSTTTTTT
T ss_pred ----C---CCHHHHHHHHHHcccCHHhCCCCCCC
Confidence 1 11246678889999999999998543
No 170
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=9.3e-35 Score=272.32 Aligned_cols=226 Identities=23% Similarity=0.357 Sum_probs=178.7
Q ss_pred ccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
.+...|++.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 3456789999999999999999985 468899999986543 33457899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|.+++.. ..+++.....++.+++.||+|||+ |||+++......
T Consensus 99 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp EECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred EEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 999999999999864 248899999999999999999996 899987654322
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.......||+.|+|||+..+..++.++||||||+++|||++|+.||..... .... ..+..... +..
T Consensus 174 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~----~~~~~~~~-----~~~ 239 (303)
T 3a7i_A 174 -IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP----MKVL----FLIPKNNP-----PTL 239 (303)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHH----HHHHHSCC-----CCC
T ss_pred -cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH----HHHH----HHhhcCCC-----CCC
Confidence 222346799999999999988999999999999999999999999853211 1111 11111111 111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.... ...+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 240 EGNY----SKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp CSSC----CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccc----CHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1111 124678889999999999999999975
No 171
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.6e-35 Score=278.41 Aligned_cols=238 Identities=21% Similarity=0.254 Sum_probs=169.0
Q ss_pred cccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccc--cHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQ--GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
...+|++.+.||+|+||.||+|+. .+++.||||+++..... ..+.+.+|++++++++|||||++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 456899999999999999999985 46889999999654322 245688999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------------ccccccc
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------------DFGLARL 308 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------------DfGla~~ 308 (435)
|||++ |+|.+++.... .+++.....++.|+++||+|||+ |||+++.
T Consensus 112 ~e~~~-~~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EECCS-EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EecCC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 99998 59999987542 38889999999999999999995 8888876
Q ss_pred ccccCccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 309 ISACETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+...........
T Consensus 187 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 187 FGIP-IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE----IDQLFKIFEVLGLPDDTT 261 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCCCCTTT
T ss_pred cCCc-ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH----HHHHHHHHHHhCCCchhh
Confidence 5432 122334578999999998876 4589999999999999999999999854321 111111222111110000
Q ss_pred c---c--------cccccCCCCHH-----HHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 388 V---L--------DPTVLNAGSKP-----MMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 388 ~---~--------~~~~~~~~~~~-----~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. . .+......... ....+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 0 00000000010 1235678999999999999999999985
No 172
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.7e-35 Score=271.68 Aligned_cols=225 Identities=20% Similarity=0.283 Sum_probs=177.5
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|.+.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 3457899999999999999999875 47899999986542 2234678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++++|.+++.... .+++.....++.|+++||+|||+ |||+++.....
T Consensus 93 v~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999999887642 48899999999999999999996 89998765432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
. .......||+.|+|||...+..++.++||||||+++|||+||+.||..... ... ......... ..|.
T Consensus 169 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~-~~~~~~~~~---~~~~ 236 (294)
T 2rku_A 169 G-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KET-YLRIKKNEY---SIPK 236 (294)
T ss_dssp T-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHH-HHHHHTTCC---CCCT
T ss_pred c-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHH-HHHHhhccC---CCcc
Confidence 2 223346799999999999888899999999999999999999999854321 111 111111111 0011
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 237 ---~----~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 237 ---H----INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp ---T----SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---c----cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1 1124667888999999999999999875
No 173
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=272.88 Aligned_cols=229 Identities=22% Similarity=0.373 Sum_probs=173.0
Q ss_pred cccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+..+|++.+.||+|+||.||+|... +|+.||||.+.... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 345678999999999999999999865 58999999986532 346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++|+|.+++.... ..+++.....++.+++.||.|||+ |||+++......
T Consensus 103 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 103 MEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp EECCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred eecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 99999999999987432 348899999999999999999996 899887654321
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTV 393 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (435)
.......||+.|+|||...+..++.++||||||+++|||++|+.||..... ...... ...........+..
T Consensus 180 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~-~~~~~~~~~~~~~~ 250 (314)
T 3com_A 180 -AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-------MRAIFM-IPTNPPPTFRKPEL 250 (314)
T ss_dssp -SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHH-HHHSCCCCCSSGGG
T ss_pred -cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHH-HhcCCCcccCCccc
Confidence 223345799999999999888899999999999999999999999853211 111111 11111111111111
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
....+.+++.+||+.||++|||+.++++
T Consensus 251 -------~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 251 -------WSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -------SCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -------CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1235678899999999999999999974
No 174
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5.4e-35 Score=275.56 Aligned_cols=236 Identities=20% Similarity=0.274 Sum_probs=171.6
Q ss_pred cCccee-eeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLV-DILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 259 (435)
..|.+. +.||+|+||.||+|... +++.||||++..........+.+|++++.++ +||||+++++++...+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 457774 78999999999999854 6899999999766555567899999999884 79999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISAC 312 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~ 312 (435)
|+++|+|.+++.... .+++.....++.|+++||+|||+ |||+++.....
T Consensus 92 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999997642 47889999999999999999996 78887654321
Q ss_pred Cc------cccccccccCCCcCCcCCCC-----CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCc-------HHH
Q 040641 313 ET------HVSTDIAGTLGYIPPEYGQS-----RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGAN-------LVG 374 (435)
Q Consensus 313 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~-------~~~ 374 (435)
.. ......+||+.|+|||++.. ..++.++|||||||++|||+||+.||........... ...
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11223469999999998764 4578999999999999999999999865432111000 011
Q ss_pred HHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 375 WVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.....+...... ...+. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~i~~~~~~-~~~~~-~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQEGKYE-FPDKD-WA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHCCCC-CCHHH-HT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCcc-cCchh-cc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 112222221110 00000 00 01235678899999999999999999986
No 175
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.8e-35 Score=288.13 Aligned_cols=227 Identities=22% Similarity=0.277 Sum_probs=165.6
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--------ccHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--------QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
..+|.+.+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++|||||++++++. .+
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence 457999999999999999999864 588999999865321 11235889999999999999999999975 45
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGL 305 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGl 305 (435)
..++||||+++|+|.+++... ..+++.....++.|+++||+|||+ |||+
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred ceEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence 689999999999998877542 358899999999999999999995 8999
Q ss_pred cccccccCccccccccccCCCcCCcCCCC---CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhcc
Q 040641 306 ARLISACETHVSTDIAGTLGYIPPEYGQS---RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKK 382 (435)
Q Consensus 306 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 382 (435)
++..... ......+||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ...+...+ ..
T Consensus 289 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~i----~~ 359 (419)
T 3i6u_A 289 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---QVSLKDQI----TS 359 (419)
T ss_dssp TTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS---SCCHHHHH----HT
T ss_pred ceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc---hHHHHHHH----hc
Confidence 8876432 22345689999999998753 5678899999999999999999999864322 11222221 11
Q ss_pred CCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 383 QQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.... ..+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 360 ~~~~--~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 360 GKYN--FIPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TCCC--CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC--CCchhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1110 00110011 1235678899999999999999999985
No 176
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-34 Score=290.50 Aligned_cols=226 Identities=23% Similarity=0.260 Sum_probs=173.8
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-------------ccHHHHHHHHHHhccCCCCCceeEEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-------------QGHRQFTAEMETLGKVKHQNLVLLLGY 247 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~g~ 247 (435)
..+|.+.+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 357899999999999999999865 578999999865321 234678999999999999999999999
Q ss_pred EEeCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------
Q 040641 248 CSFDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------- 301 (435)
Q Consensus 248 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------- 301 (435)
+......++|||||++|+|.+++.... .+++.....++.|++.||+|||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999999887642 48899999999999999999995
Q ss_pred -cccccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHh
Q 040641 302 -DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKM 380 (435)
Q Consensus 302 -DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~ 380 (435)
|||+++..... .......||+.|+|||++.+ .++.++||||+||++|||++|+.||..... ..+ ...+
T Consensus 191 ~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~----~~~i 259 (504)
T 3q5i_A 191 VDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND----QDI----IKKV 259 (504)
T ss_dssp CCCTTCEECCTT--SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHH
T ss_pred EECCCCEEcCCC--CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH----HHH----HHHH
Confidence 89998776432 22345679999999998764 689999999999999999999999864321 111 2222
Q ss_pred ccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 381 KKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
...... .+..... .....+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~--~~~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 260 EKGKYY--FDFNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHCCCC--CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HcCCCC--CCccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 222111 0000000 01235678889999999999999999974
No 177
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.1e-35 Score=278.67 Aligned_cols=235 Identities=24% Similarity=0.305 Sum_probs=163.2
Q ss_pred ccccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCC-CCCceeEEEEEE------
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-HQNLVLLLGYCS------ 249 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~------ 249 (435)
+.....+|++.+.||+|+||.||+|+.. +++.||||++........+.+.+|+.++.++. |||||++++++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 3444568999999999999999999864 68999999986655555678999999999996 999999999994
Q ss_pred --eCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------
Q 040641 250 --FDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------- 301 (435)
Q Consensus 250 --~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------- 301 (435)
.....++||||+. |+|.+++..... ...+++.....++.+++.||+|||+
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEe
Confidence 3344789999996 799988875322 2358999999999999999999985
Q ss_pred cccccccccccCcc-----------ccccccccCCCcCCcCC---CCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccc
Q 040641 302 DFGLARLISACETH-----------VSTDIAGTLGYIPPEYG---QSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEK 367 (435)
Q Consensus 302 DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~ 367 (435)
|||+++........ ......||+.|+|||++ .+..++.++|||||||++|||+||+.||.....
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-- 258 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK-- 258 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--
Confidence 89988765432211 11134689999999987 567789999999999999999999999853211
Q ss_pred cCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 368 EGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
..+ ...... ...+. .. ...+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 259 --~~~---~~~~~~------~~~~~---~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 259 --LRI---VNGKYS------IPPHD---TQ----YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ------------CC------CCTTC---CS----SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHh---hcCccc------CCccc---cc----chHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 001 000000 00000 00 113567888999999999999999999998764
No 178
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.9e-35 Score=292.14 Aligned_cols=225 Identities=23% Similarity=0.281 Sum_probs=177.0
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++...+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57899999999999999999865 68999999986432 334678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISA 311 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~ 311 (435)
||+++|+|.+++... ..+++.....++.|++.||+|||+ |||+++....
T Consensus 106 e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999999988753 348899999999999999999995 8998876643
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
.. ......||+.|+|||++.+ .++.++||||+||++|||++|+.||..... ..+ ...+....... ..+
T Consensus 182 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~----~~~i~~~~~~~-~~~ 249 (484)
T 3nyv_A 182 SK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE----YDI----LKKVEKGKYTF-ELP 249 (484)
T ss_dssp CC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHCCCCC-CSG
T ss_pred cc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH----HHH----HHHHHcCCCCC-CCc
Confidence 22 2344679999999998865 689999999999999999999999854321 111 12222221110 001
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .......+.+++.+||+.||++|||+.|+++
T Consensus 250 ~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 250 Q-----WKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp G-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 1 0112235678889999999999999999974
No 179
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6e-35 Score=277.60 Aligned_cols=225 Identities=20% Similarity=0.289 Sum_probs=177.6
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|.+.+.||+|+||.||+++.. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3467999999999999999999865 47899999986542 2345678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++++|.+++... ..+++.....++.|+++||+|||+ |||+++.....
T Consensus 119 v~e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999988764 248899999999999999999996 89998776432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
. .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ... ...+...... .+.
T Consensus 195 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~-~~~~~~~~~~---~~~ 262 (335)
T 2owb_A 195 G-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KET-YLRIKKNEYS---IPK 262 (335)
T ss_dssp T-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHH-HHHHHHTCCC---CCT
T ss_pred c-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-------HHH-HHHHhcCCCC---CCc
Confidence 2 223346799999999999888899999999999999999999999854221 111 1111111110 011
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 263 ---~----~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 263 ---H----INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ---T----SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---c----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1124667888999999999999999875
No 180
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.8e-35 Score=294.35 Aligned_cols=230 Identities=22% Similarity=0.294 Sum_probs=180.3
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++|++++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 4467899999999999999999865 68999999996532 2345678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|..++.... ...+++.....++.+++.||+|||+ |||+++.....
T Consensus 262 VmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp EECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999987542 2348899999999999999999996 99999876532
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...+..... .
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----~~~i~~~i~~~~~------~ 407 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKEVPE------E 407 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC----HHHHHHHHHHCCC------C
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh----HHHHHHHhhcccc------c
Confidence 2 23346899999999999988899999999999999999999999865322111 1112222211110 0
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRP-----TMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----s~~evl~ 428 (435)
.. . .....+.+++.+||+.||++|| ++.||++
T Consensus 408 ~p-~---~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 408 YS-E---RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CC-T---TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred CC-c---cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 00 0 1123567788899999999999 7788864
No 181
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=276.70 Aligned_cols=238 Identities=26% Similarity=0.314 Sum_probs=173.7
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEcccccc-----ccHHHHHHHHHHhccCC---CCCceeEEEEEEeCC
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKT-----QGHRQFTAEMETLGKVK---HQNLVLLLGYCSFDE 252 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~ 252 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+..... .....+.+|++++++++ |||||+++++|....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 35899999999999999999996 4688999999864321 12356778888877665 999999999998765
Q ss_pred -----eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cc
Q 040641 253 -----EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DF 303 (435)
Q Consensus 253 -----~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------Df 303 (435)
..++||||+. |+|.+++.... ...+++..+..++.|+++||+|||+ ||
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 4789999997 69999987643 2348999999999999999999996 99
Q ss_pred cccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccC
Q 040641 304 GLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQ 383 (435)
Q Consensus 304 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 383 (435)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ......+.......
T Consensus 165 g~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~ 238 (308)
T 3g33_A 165 GLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE----ADQLGKIFDLIGLP 238 (308)
T ss_dssp SCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH----HHHHHHHHHHHCCC
T ss_pred ccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCC
Confidence 999865432 223456899999999999888899999999999999999999999864322 12222222222111
Q ss_pred CCCcccc----cc--c--cCCCC-----HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 384 QADDVLD----PT--V--LNAGS-----KPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 384 ~~~~~~~----~~--~--~~~~~-----~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
....... +. . ..+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1110000 00 0 00000 011235678889999999999999999975
No 182
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.8e-35 Score=271.05 Aligned_cols=227 Identities=23% Similarity=0.321 Sum_probs=175.1
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 57889999999999999999865 689999999865432 3456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCc-c
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACET-H 315 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~-~ 315 (435)
+++|+|.+++... ..+++.....++.++++||+|||+ |||+++....... .
T Consensus 87 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 87 CSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp CTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 9999998887542 358899999999999999999996 8998876543211 2
Q ss_pred ccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccccc
Q 040641 316 VSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVL 394 (435)
Q Consensus 316 ~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (435)
......||+.|+|||...+..+ +.++||||||+++|||+||+.||....... ..... ...... ...+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~-----~~~~~~--~~~~--- 230 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSD-----WKEKKT--YLNP--- 230 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS--HHHHH-----HHTTCT--TSTT---
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH--HHHHH-----hhhccc--ccCc---
Confidence 2334679999999999887665 779999999999999999999986432211 11111 111100 0000
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 395 NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 395 ~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.......+.+++.+||+.||++|||+.|+++
T Consensus 231 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 ---WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0111234667889999999999999999875
No 183
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=280.36 Aligned_cols=218 Identities=22% Similarity=0.284 Sum_probs=173.7
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEcccccc--------ccHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKT--------QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+..... .....+.+|+.++++++|||||++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 35789999999999999999985 4688999999865421 12345778999999999999999999999999
Q ss_pred eeEEEEecccCC-CHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccc
Q 040641 253 EKLLVYEYMVNG-SLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLAR 307 (435)
Q Consensus 253 ~~~lv~ey~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~ 307 (435)
..++||||+.+| +|..++... ..+++..+..++.+++.||+|||+ |||+++
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 999999999877 999998753 248899999999999999999995 999998
Q ss_pred cccccCccccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ...
T Consensus 179 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------~~~---- 239 (335)
T 3dls_A 179 YLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------VEA---- 239 (335)
T ss_dssp ECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------TTT----
T ss_pred ECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------Hhh----
Confidence 765432 2234679999999999887776 88999999999999999999998532110 000
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKL 429 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~ 429 (435)
....|.. ....+.+++.+||+.||++|||+.++++.
T Consensus 240 ~~~~~~~-------~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 AIHPPYL-------VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCCSSC-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ccCCCcc-------cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011111 11246788899999999999999999863
No 184
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.8e-35 Score=278.85 Aligned_cols=233 Identities=21% Similarity=0.326 Sum_probs=174.8
Q ss_pred ccccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEcccccc-ccHHHHHHHHHH-hccCCCCCceeEEEEEEeCCee
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKT-QGHRQFTAEMET-LGKVKHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~ 254 (435)
+.....+|++.+.||+|+||.||+|+. .+|+.||||++..... ....++..|..+ ++.++|||||++++++...+..
T Consensus 46 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred eEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 345567899999999999999999986 5689999999965432 234456666665 7889999999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLI 309 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~ 309 (435)
++||||+++ +|.+++.........+++.....++.|+++||+|||+ |||+++..
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999999985 9998887543334568999999999999999999994 88888765
Q ss_pred cccCccccccccccCCCcCCcCCC----CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQ----SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
... .......||+.|+|||++. ...++.++|||||||++|||+||+.||..... .............
T Consensus 205 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~------~~~~~~~~~~~~~- 275 (340)
T 3an0_A 205 VDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPS- 275 (340)
T ss_dssp SCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCC-
T ss_pred ccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc------hHHHHHHHhcCCC-
Confidence 421 1223357999999999853 44789999999999999999999999854211 1111112221111
Q ss_pred CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 386 DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. ... ......+.+++.+||+.||++|||+.||++
T Consensus 276 ~~-----~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 PQ-----LPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CC-----CCG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC-----CCc---ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 10 000 011235778899999999999999999975
No 185
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4e-35 Score=272.38 Aligned_cols=221 Identities=17% Similarity=0.273 Sum_probs=170.5
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+.... .....++.+|+..+.++ +|||||++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999875 68999999987532 23456788999999999 9999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------------------
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------------------- 301 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------------------- 301 (435)
||+++|+|.+++.........+++.....++.|+++||+|||+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------C
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 9999999999997653323458999999999999999999985
Q ss_pred ------cccccccccccCccccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHH
Q 040641 302 ------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVG 374 (435)
Q Consensus 302 ------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~ 374 (435)
|||.++.... .....||+.|+|||.+.+. .++.++|||||||++|||++|.+|+... ...
T Consensus 171 ~~~kl~Dfg~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~- 237 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISS-----PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG-------DQW- 237 (289)
T ss_dssp CCEEECCCTTCEETTC-----SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-------HHH-
T ss_pred eEEEEcccccccccCC-----ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-------hHH-
Confidence 4555443322 1224589999999988765 6678999999999999999998775321 111
Q ss_pred HHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 375 WVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..+....... ..... ...+.+++.+||+.||++|||+.|+++
T Consensus 238 ---~~~~~~~~~~-----~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 238 ---HEIRQGRLPR-----IPQVL----SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---HHHHTTCCCC-----CSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHcCCCCC-----CCccc----CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1111111111 11111 135677888999999999999999975
No 186
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.3e-35 Score=280.08 Aligned_cols=241 Identities=24% Similarity=0.322 Sum_probs=173.8
Q ss_pred cccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccc--cHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQ--GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
.....+|++.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++...+..+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 100 (331)
T 4aaa_A 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWY 100 (331)
T ss_dssp CBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEE
Confidence 345678999999999999999999865 4899999998644322 3456889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++++|..++... ..+++.....++.+++.||+|||+ |||+++....
T Consensus 101 lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 101 LVFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EEEECCSEEHHHHHHHST----TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEecCCcchHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 999999999998886543 248899999999999999999996 8999876543
Q ss_pred cCccccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhc---------
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMK--------- 381 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------- 381 (435)
.. .......||+.|+|||++.+. .++.++|||||||++|||+||+.||...... .....+.....
T Consensus 177 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 177 PG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI----DQLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHHH
T ss_pred Cc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCChhhhhH
Confidence 22 223346799999999988765 7899999999999999999999998643221 11111111000
Q ss_pred --c-CCCCccccccccCCCC-----HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 382 --K-QQADDVLDPTVLNAGS-----KPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 382 --~-~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ........+....... ......+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 0000011111111110 012345778999999999999999999874
No 187
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.5e-34 Score=265.64 Aligned_cols=223 Identities=22% Similarity=0.332 Sum_probs=168.6
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|.+.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357899999999999999999875 68999999986532 23456789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+++++|.+++.... .+++.....++.++++||+|||+ |||+++......
T Consensus 90 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999997642 37889999999999999999996 899887654321
Q ss_pred ccccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......||+.|+|||...+..+ +.++||||||+++|||++|+.||..... .. ....+..... ..|.
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~-~~~~~~~~~~---~~~~ 232 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------PT-LFKKIRGGVF---YIPE 232 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HHHHHHHCCC---CCCT
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HH-HHHHhhcCcc---cCch
Confidence 2234578999999999887765 6899999999999999999999854211 11 1222221110 0111
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 233 ---~----~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 233 ---Y----LNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ---T----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---h----cCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1 1124667889999999999999999986
No 188
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.2e-35 Score=269.20 Aligned_cols=222 Identities=19% Similarity=0.310 Sum_probs=153.2
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 257 (435)
..+|++.+.||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 35789999999999999999985 468999999986532 23356789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||+ +|+|.+++... ..+++.....++.+++.||+|||+ |||+++......
T Consensus 92 ~e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 67887777643 348899999999999999999996 899987654322
Q ss_pred ccccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......||+.|+|||...+..+ +.++|||||||++|||+||+.||..... .. ....+...... .|.
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~-~~~~~~~~~~~---~~~ 233 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PV-LFKNISNGVYT---LPK 233 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HHHHHHHTCCC---CCT
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HH-HHHHHHhCCCC---CCc
Confidence 2234579999999999877665 7899999999999999999999854321 11 11222111110 011
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 234 ---~----~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 234 ---F----LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---T----SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---c----CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1 1124677889999999999999999974
No 189
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.7e-35 Score=270.60 Aligned_cols=232 Identities=20% Similarity=0.281 Sum_probs=163.3
Q ss_pred cccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccc--cHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQ--GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
+....+|++.+.||+|+||.||+|+. .+++.||||++...... ..+.+.++...++.++||||+++++++..++..+
T Consensus 3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~ 82 (290)
T 3fme_A 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 82 (290)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence 34557899999999999999999986 46889999999654222 2234555566688999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------ccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLIS 310 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~ 310 (435)
+||||++ |+|.+++.........+++.....++.|++.||+|||+ |||+++...
T Consensus 83 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 83 ICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred EEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9999997 58888876543334568999999999999999999995 888887654
Q ss_pred ccCccccccccccCCCcCCcCC----CCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC
Q 040641 311 ACETHVSTDIAGTLGYIPPEYG----QSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD 386 (435)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (435)
.. .......||+.|+|||.+ ....++.++|||||||++|||+||+.||..... ..............
T Consensus 162 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~- 232 (290)
T 3fme_A 162 DD--VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSP- 232 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCC-
T ss_pred cc--ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc------hHHHHHHHhccCCC-
Confidence 32 122334799999999985 566789999999999999999999999853211 11111222221111
Q ss_pred ccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 387 DVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .... .....+.+++.+||+.||++|||+.|+++
T Consensus 233 ~-----~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 233 Q-----LPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp C-----CCTT---TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C-----cccc---cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 0011 11235678889999999999999999975
No 190
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=277.09 Aligned_cols=232 Identities=13% Similarity=0.098 Sum_probs=177.9
Q ss_pred ccccccCcceeeeecccCcceEEEEE------cCCCCEEEEEEccccccccHHHHHHHHHHhccCC---CCCceeEEEEE
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKAT------LPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK---HQNLVLLLGYC 248 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~ 248 (435)
+.....+|.+.+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++.+++ |+||+++++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 44556789999999999999999994 345889999999653 3456777888777776 99999999999
Q ss_pred EeCCeeEEEEecccCCCHHHHHHhhCC-CCCCCCHHHHHHHHHHhhhccceeec--------------------------
Q 040641 249 SFDEEKLLVYEYMVNGSLDLWLRNATG-SHEVLDRAKRYKIACSSARGLAFLHQ-------------------------- 301 (435)
Q Consensus 249 ~~~~~~~lv~ey~~~g~L~~~l~~~~~-~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------- 301 (435)
...+..++|||||++|+|.+++..... ....+++..+..++.|+++||+|||+
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC----
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999999975322 23469999999999999999999995
Q ss_pred ---------ccccccccccc-CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCc
Q 040641 302 ---------DFGLARLISAC-ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGAN 371 (435)
Q Consensus 302 ---------DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~ 371 (435)
|||+|+.+... .....+..+||+.|||||++.+..++.++|||||||++|||+||+.||........
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--- 293 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--- 293 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---
Confidence 78888765321 22334556899999999999999999999999999999999999999843211100
Q ss_pred HHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCC-CCHHHHHHHHhhhh
Q 040641 372 LVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATR-PTMLHVLKLLHEIV 434 (435)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R-Ps~~evl~~L~~i~ 434 (435)
.+..........+ .+.+++..|++.+|.+| |++.++.+.|++++
T Consensus 294 ----------------~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 294 ----------------KPEGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ----------------EECSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ----------------eechhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 0000011111222 34456678999999988 67888888887754
No 191
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.3e-36 Score=292.12 Aligned_cols=223 Identities=16% Similarity=0.174 Sum_probs=166.7
Q ss_pred ccccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEcccc---ccccHHHHHHHH---HHhccCCCCCceeEE-----
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQA---KTQGHRQFTAEM---ETLGKVKHQNLVLLL----- 245 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~----- 245 (435)
+..+..+|++.+.||+|+||.||+|+. .+|+.||||++... .....+.|.+|+ +++++++|||||+++
T Consensus 68 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~ 147 (377)
T 3byv_A 68 LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 147 (377)
T ss_dssp SSCCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCC
T ss_pred cCCCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhh
Confidence 344567899999999999999999996 46899999999643 233457799999 566677899999998
Q ss_pred --EEEEeCCe-----------------eEEEEecccCCCHHHHHHhhCCC---CCCCCHHHHHHHHHHhhhccceeec--
Q 040641 246 --GYCSFDEE-----------------KLLVYEYMVNGSLDLWLRNATGS---HEVLDRAKRYKIACSSARGLAFLHQ-- 301 (435)
Q Consensus 246 --g~~~~~~~-----------------~~lv~ey~~~g~L~~~l~~~~~~---~~~l~~~~~~~i~~~ia~gl~yLH~-- 301 (435)
+++...+. .++||||+ +|+|.+++...... ...+++..+..++.|+++||+|||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 226 (377)
T 3byv_A 148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG 226 (377)
T ss_dssp CSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 66665532 78999999 68999999764211 1234467888899999999999996
Q ss_pred ----------------------cccccccccccCccccccccccCCCcCCcCCCCC-----------CCCCcccchhHHH
Q 040641 302 ----------------------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSR-----------MSTTRGDVYSFGV 348 (435)
Q Consensus 302 ----------------------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~k~DV~SfGv 348 (435)
|||+++.... .....+| +.|+|||++.+. .++.++|||||||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999986332 2345678 999999998776 7999999999999
Q ss_pred HHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 349 ILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 349 il~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
++|||+||+.||......... ..... .. .. ....+.+++.+||+.||++|||+.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~~~----------------~~~~~-~~-~~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGS----------------EWIFR-SC-KN----IPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------CCS----------------GGGGS-SC-CC----CCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCcccccccch----------------hhhhh-hc-cC----CCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999998543211100 00000 00 01 1135678889999999999999999984
No 192
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.8e-34 Score=277.33 Aligned_cols=226 Identities=22% Similarity=0.293 Sum_probs=174.3
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--------ccHHHHHHHHHHhccC-CCCCceeEEEEEEeCC
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--------QGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDE 252 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 252 (435)
.+|.+.+.||+|+||.||+|+.. +|+.||||.+..... ...+.+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 56889999999999999999975 689999998864321 1135688999999999 7999999999999999
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++||||+++|+|.+++... ..+++.....++.|++.||.|||+ |||+++.
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~ 249 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH 249 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence 999999999999999999764 248899999999999999999996 9999877
Q ss_pred ccccCccccccccccCCCcCCcCCC------CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhcc
Q 040641 309 ISACETHVSTDIAGTLGYIPPEYGQ------SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKK 382 (435)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 382 (435)
+.... ......||+.|+|||++. ...++.++|||||||++|||+||+.||..... .... ..+..
T Consensus 250 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~~~----~~i~~ 319 (365)
T 2y7j_A 250 LEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ----ILML----RMIME 319 (365)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHH----HHHHH
T ss_pred cCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH----HHHH----HHHHh
Confidence 65322 234568999999999764 34688999999999999999999999854211 1111 11111
Q ss_pred CCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 383 QQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.... ...+.. .. ....+.+++.+||+.||++|||+.|+++
T Consensus 320 ~~~~-~~~~~~-~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 320 GQYQ-FSSPEW-DD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp TCCC-CCHHHH-SS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC-CCCccc-cc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1110 000100 01 1124678889999999999999999986
No 193
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-34 Score=281.66 Aligned_cols=175 Identities=30% Similarity=0.408 Sum_probs=136.2
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc--cccHHHHHHHHHHhccCC-CCCceeEEEEEEeCC--eeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVK-HQNLVLLLGYCSFDE--EKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~ 255 (435)
..+|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++.++. |||||++++++...+ ..+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 35789999999999999999985 468999999986432 234467889999999997 999999999997654 689
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+|||||+ |+|..+++.. .+++.....++.|+++||+|||+ |||+|+....
T Consensus 88 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 9999998 6899988753 47888899999999999999996 9999986532
Q ss_pred c--------------------CccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCC
Q 040641 312 C--------------------ETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGP 362 (435)
Q Consensus 312 ~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~ 362 (435)
. .....+..+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 1 1112345689999999998876 6789999999999999999999999854
No 194
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.3e-34 Score=266.06 Aligned_cols=223 Identities=19% Similarity=0.292 Sum_probs=176.5
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLL 256 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 256 (435)
...+|++.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|++++++++||||+++++++...+..++
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 3467899999999999999999865 57889999986432 2234678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISAC 312 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~ 312 (435)
||||+++|+|.+++.... .+++.....++.++++||+|||+ |||++......
T Consensus 92 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 999999999999997642 47889999999999999999996 88888654321
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
......||+.|+|||...+..++.++||||||+++|||++|+.||..... ... ...+..... .
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~-~~~~~~~~~------~ 230 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-------TET-HRRIVNVDL------K 230 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHH-HHHHHTTCC------C
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-------hHH-HHHHhcccc------C
Confidence 22346799999999999988999999999999999999999999854221 111 111111110 0
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.... ....+.+++.+||+.||++|||+.++++
T Consensus 231 ~~~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 231 FPPF----LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CCTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCc----CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1011 1124667889999999999999999975
No 195
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.9e-35 Score=288.18 Aligned_cols=234 Identities=22% Similarity=0.220 Sum_probs=167.2
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCC------
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE------ 252 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 252 (435)
..+|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++|||||++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999854 58899999996542 234567889999999999999999999996553
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++|||||+++ |...+.. .+++.....++.|+++||+|||+ |||+|+.
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCCC-HHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 569999999865 5555532 27888999999999999999996 9999987
Q ss_pred ccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCC----
Q 040641 309 ISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQ---- 384 (435)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 384 (435)
.... ...+..+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+....+...+....
T Consensus 214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~----~~~~~~i~~~lg~p~~~~~ 287 (464)
T 3ttj_A 214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY----IDQWNKVIEQLGTPCPEFM 287 (464)
T ss_dssp ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCSCCHHHH
T ss_pred cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcCCCCHHHH
Confidence 6532 233557899999999999999999999999999999999999999854321 111111111111000
Q ss_pred ----------------CCc-----cccccccCCC---CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 385 ----------------ADD-----VLDPTVLNAG---SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 385 ----------------~~~-----~~~~~~~~~~---~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
... .......... .......+.+++.+||+.||++|||+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000000000 0112345788999999999999999999975
No 196
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=279.94 Aligned_cols=237 Identities=22% Similarity=0.300 Sum_probs=168.0
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccc-cHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQ-GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 260 (435)
++|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++|||||++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 47889999999999999999865 6889999998654322 122456799999999999999999999999999999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCccc
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACETHV 316 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~~~ 316 (435)
++ |+|.+++.... ..+++.....++.+++.||+|||+ |||+++..... ...
T Consensus 82 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP-TKT 156 (324)
T ss_dssp CS-EEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC-ccc
Confidence 97 58988887642 358888999999999999999995 89998765432 122
Q ss_pred cccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC---cccc--
Q 040641 317 STDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD---DVLD-- 390 (435)
Q Consensus 317 ~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 390 (435)
.....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+.......... ....
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV----EEQLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCChHhchhhhcch
Confidence 234578999999998765 5789999999999999999999999864321 12222222222211110 0000
Q ss_pred -------ccccCCC----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 391 -------PTVLNAG----SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 391 -------~~~~~~~----~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
+...... .......+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 0011234678899999999999999999975
No 197
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-34 Score=281.07 Aligned_cols=237 Identities=21% Similarity=0.224 Sum_probs=170.0
Q ss_pred cccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeC--------
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD-------- 251 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-------- 251 (435)
...+|++.+.||+|+||.||+|+. .+|+.||||++..... ...+|+++++.++|||||++++++...
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 456899999999999999999985 5689999999864332 234799999999999999999998543
Q ss_pred ------------------------------CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 252 ------------------------------EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 252 ------------------------------~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
...++||||++ |+|.+.+.........+++.....++.|+++||+|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 159 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS 159 (383)
T ss_dssp -----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33789999998 58888776533334568999999999999999999996
Q ss_pred -------------------------cccccccccccCccccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHh
Q 040641 302 -------------------------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVT 355 (435)
Q Consensus 302 -------------------------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~t 355 (435)
|||+++...... ......||+.|+|||.+.+. .++.++||||+||++|||++
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 899998764332 23346789999999987664 58999999999999999999
Q ss_pred CCCCCCCCcccccCCcHHHHHHHHhccCC----------CCccccccccCCC-----CHHHHHHHHHHHhcccCCCCCCC
Q 040641 356 AKEPTGPEFQEKEGANLVGWVFQKMKKQQ----------ADDVLDPTVLNAG-----SKPMMLKMLRIAADCVADNPATR 420 (435)
Q Consensus 356 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-----~~~~~~~~~~l~~~C~~~~P~~R 420 (435)
|+.||..... .+....+........ ..+..-|...... .......+.+++.+||+.||++|
T Consensus 238 g~~pf~~~~~----~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 238 GKPLFSGETS----IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp SSCSSCCSSH----HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred CCCCCCCCCh----HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999864322 111111111111100 0000001110000 00112346788999999999999
Q ss_pred CCHHHHHH
Q 040641 421 PTMLHVLK 428 (435)
Q Consensus 421 Ps~~evl~ 428 (435)
||+.|+++
T Consensus 314 ~t~~e~l~ 321 (383)
T 3eb0_A 314 INPYEAMA 321 (383)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhc
Confidence 99999973
No 198
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-34 Score=277.27 Aligned_cols=238 Identities=25% Similarity=0.328 Sum_probs=170.6
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccc-----cHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQ-----GHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 255 (435)
..+|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++...+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 457899999999999999999975 5899999999643221 1346889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++ +|..++... ...+++.....++.++++||+|||+ |||+++....
T Consensus 89 lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp EEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred EEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 99999986 888888653 2347788889999999999999996 9999987643
Q ss_pred cCccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLD 390 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (435)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|.+||..... ......+.............+
T Consensus 165 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 165 PN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD----LDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp CC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCCCCTTTSSS
T ss_pred Cc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHHHcCCCChhhhhh
Confidence 22 23345679999999998765 4589999999999999999999988754321 112222222221111110000
Q ss_pred ----ccc-----cCCCC-----HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 391 ----PTV-----LNAGS-----KPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 391 ----~~~-----~~~~~-----~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
+.. ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000 00000 111245778899999999999999999985
No 199
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4e-35 Score=273.04 Aligned_cols=235 Identities=26% Similarity=0.355 Sum_probs=170.6
Q ss_pred ccccCcceeeeecccCcceEEEEEcC--CCC--EEEEEEccccc---cccHHHHHHHHHHhccCCCCCceeEEEEEEeCC
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP--DGK--TVAVKKFSQAK---TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE 252 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 252 (435)
....+|++.+.||+|+||.||+|++. +++ .||||.++... ....+.|.+|++++++++||||+++++++....
T Consensus 15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 94 (291)
T 1u46_A 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP 94 (291)
T ss_dssp CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC
Confidence 34568999999999999999999853 333 68999986542 234567999999999999999999999997654
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
.++||||+++|+|.+++.... ..+++.....++.++++||+|||+ |||+++.
T Consensus 95 -~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 95 -MKMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp -CEEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred -ceeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 899999999999999997642 347889999999999999999996 8999887
Q ss_pred ccccCcc--ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 309 ISACETH--VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 309 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
....... ......+|+.|+|||...+..++.++||||||+++|||++ |+.||..... ........... .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~-~ 242 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQILHKIDKEG-E 242 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTSC-C
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-------HHHHHHHHccC-C
Confidence 6443221 2234567889999999888888999999999999999999 9999854211 11111111111 0
Q ss_pred CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 386 DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ...+ ......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 243 ~-~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 243 R-LPRP-------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp C-CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred C-CCCC-------cCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 0 0001 111235678889999999999999999999998763
No 200
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.4e-34 Score=266.49 Aligned_cols=238 Identities=23% Similarity=0.305 Sum_probs=173.7
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999865 689999999865432 234678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccCcc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACETH 315 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~~~ 315 (435)
|++ |+|.+++.... ...+++.....++.++++||+|||+ |||+++..... ..
T Consensus 83 ~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VR 158 (299)
T ss_dssp CCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC-SB
T ss_pred ccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC-cc
Confidence 998 69999987643 2347888999999999999999996 89988765432 12
Q ss_pred ccccccccCCCcCCcCCCCCC-CCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC---cc---
Q 040641 316 VSTDIAGTLGYIPPEYGQSRM-STTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD---DV--- 388 (435)
Q Consensus 316 ~~~~~~gt~~y~aPE~~~~~~-~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 388 (435)
......||+.|+|||...+.. ++.++|||||||++|||+||+.||..... ......+.......... ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHHHHhCCCchhhhhHhhcC
Confidence 223457899999999887654 78999999999999999999999864321 11111122211111000 00
Q ss_pred --cccccc---CCC----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 389 --LDPTVL---NAG----SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 389 --~~~~~~---~~~----~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..+... ... .......+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 000 0011235678899999999999999999985
No 201
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=272.77 Aligned_cols=235 Identities=23% Similarity=0.362 Sum_probs=171.9
Q ss_pred ccccccccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccC-CCCCceeEEEEEEe-
Q 040641 174 NISMFQQPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSF- 250 (435)
Q Consensus 174 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~- 250 (435)
+.........+|++.+.||+|+||.||+|+. .+++.||||.+.... .....+.+|+.+++++ +||||+++++++..
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3444556678899999999999999999986 468999999986433 3346789999999998 89999999999977
Q ss_pred -----CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------
Q 040641 251 -----DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------ 301 (435)
Q Consensus 251 -----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------ 301 (435)
.+..++||||+++|+|.+++.... ...+++.....++.+++.||+|||+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEe
Confidence 467899999999999999997642 2358888899999999999999996
Q ss_pred cccccccccccCccccccccccCCCcCCcCCC-----CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHH
Q 040641 302 DFGLARLISACETHVSTDIAGTLGYIPPEYGQ-----SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWV 376 (435)
Q Consensus 302 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~ 376 (435)
|||+++...... .......||+.|+|||++. ...++.++|||||||++|||+||+.||..... ....
T Consensus 172 Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~ 243 (326)
T 2x7f_A 172 DFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-------MRAL 243 (326)
T ss_dssp CCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHH
T ss_pred eCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHH
Confidence 899887654321 1223457999999999876 56789999999999999999999999853211 1111
Q ss_pred HHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 377 FQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..... .... ....... ...+.+++.+||+.||++|||+.++++
T Consensus 244 ~~~~~-~~~~-----~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 244 FLIPR-NPAP-----RLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHH-SCCC-----CCSCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHhhc-Cccc-----cCCcccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11111 1111 1111111 125677888999999999999999975
No 202
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.2e-34 Score=265.15 Aligned_cols=225 Identities=22% Similarity=0.283 Sum_probs=174.8
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEEe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 259 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 57899999999999999999875 68899999986543 2345789999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccccccccc
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISAC 312 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~ 312 (435)
|+++++|.+++.... .+++.....++.+++.||+|||+ |||+++.....
T Consensus 102 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 102 LYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred ccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 999999998887542 47899999999999999999995 78887765432
Q ss_pred CccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcccccc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPT 392 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (435)
. ......||+.|+|||...+. ++.++||||||+++|||++|+.||..... ..+ ...+........ .+.
T Consensus 178 ~--~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~----~~~~~~~~~~~~-~~~ 245 (287)
T 2wei_A 178 T--KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE----YDI----LKRVETGKYAFD-LPQ 245 (287)
T ss_dssp S--SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHHHHCCCCCC-SGG
T ss_pred C--ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCH----HHH----HHHHHcCCCCCC-chh
Confidence 1 12334689999999988764 88999999999999999999999854321 111 112211111100 000
Q ss_pred ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 393 VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. .....+.+++.+||+.||++|||+.|+++
T Consensus 246 -~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 246 -WR----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp -GT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -hh----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 11235678889999999999999999986
No 203
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2e-34 Score=273.39 Aligned_cols=232 Identities=17% Similarity=0.207 Sum_probs=173.0
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCC-CCCceeEEEEEEe--CCeeEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-HQNLVLLLGYCSF--DEEKLLV 257 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lv 257 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.++.. ..+.+.+|++++++++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36799999999999999999985 56899999998643 3467899999999997 9999999999987 6678999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------ccccccccccc
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLISAC 312 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~~~ 312 (435)
|||+++++|..++.. +++.....++.|+++||+|||+ |||+++.....
T Consensus 112 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999988753 7788899999999999999996 89999865432
Q ss_pred CccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHh---------cc
Q 040641 313 ETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKM---------KK 382 (435)
Q Consensus 313 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~ 382 (435)
. ......||..|+|||...+ ..++.++|||||||++|||+||+.||....... .....+.... ..
T Consensus 185 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 185 Q--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY---DQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp C--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH---HHHHHHHHHHCHHHHHHHHHH
T ss_pred C--ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH---HHHHHHHHhcCCchhhhHHHH
Confidence 2 2234578999999998776 678999999999999999999999985432211 0111000000 00
Q ss_pred CCC--------------CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 383 QQA--------------DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 383 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
... ...................+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 0000000000111112345778999999999999999999986
No 204
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.7e-34 Score=282.94 Aligned_cols=236 Identities=17% Similarity=0.212 Sum_probs=178.3
Q ss_pred cCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCCC-CCceeEEEEEEeCCeeEEEEec
Q 040641 183 LKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKH-QNLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~ey 260 (435)
.+|.+.+.||+|+||.||+|+. .+++.||||.+..... ..++.+|+++++.++| ++|..+..++...+..++||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 5789999999999999999985 5689999998764332 2357899999999987 5566666677788889999999
Q ss_pred ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccccC
Q 040641 261 MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISACE 313 (435)
Q Consensus 261 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~~~ 313 (435)
+ +|+|.+++.... ..+++..++.++.|++.||+|||+ |||+++......
T Consensus 85 ~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 85 L-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp C-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred C-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 9 999999997532 348999999999999999999995 999998765432
Q ss_pred cc------ccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCc
Q 040641 314 TH------VSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADD 387 (435)
Q Consensus 314 ~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (435)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+...........
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHHHHHHHHSCHHH
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHHhhccccccHHH
Confidence 21 12256899999999999999999999999999999999999999864322111 111111111110000000
Q ss_pred cccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHhhhh
Q 040641 388 VLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~~L~~i~ 434 (435)
. ... ...++.+++..||+.+|++||++.+|++.|+++.
T Consensus 240 l-----~~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 240 L-----CRG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp H-----HTT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred H-----hcC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 0 000 1235778899999999999999999999999874
No 205
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.7e-34 Score=279.52 Aligned_cols=235 Identities=22% Similarity=0.237 Sum_probs=168.2
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCC------eeE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE------EKL 255 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~ 255 (435)
.+|++.+.||+|+||.||+|++. +|+.||||++..... .+.+|+++|++++|||||+++++|.... ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46889999999999999999975 589999999864322 2347999999999999999999985421 267
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------ccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLIS 310 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~ 310 (435)
+||||+++ +|..++.........+++.....++.|+++||+|||+ |||+++...
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 99999986 5665554322233468999999999999999999996 999998764
Q ss_pred ccCccccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhcc-------
Q 040641 311 ACETHVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKK------- 382 (435)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------- 382 (435)
... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... .+....+...+..
T Consensus 209 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 209 RGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG----VDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp TTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCSCCHHHHH
T ss_pred cCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHHHH
Confidence 322 22346799999999987654 789999999999999999999999864321 1111111111110
Q ss_pred ---CCCCccccccccCCCCH-----HHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 383 ---QQADDVLDPTVLNAGSK-----PMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 383 ---~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
....+...|........ .....+.+++.+||+.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00111111111100000 11235778999999999999999999974
No 206
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.4e-34 Score=274.40 Aligned_cols=173 Identities=24% Similarity=0.266 Sum_probs=146.0
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCC-----CCCceeEEEEEEeCCeeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-----HQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~g~~~~~~~~~ 255 (435)
..+|.+.+.||+|+||.||+|+. .+++.||||.++... ...+.+..|+.++++++ |||||++++++...+..+
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 46899999999999999999986 468899999996432 33456788999998886 999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------------
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------------- 301 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------------- 301 (435)
+||||+ +|+|.+++.... ...+++.....++.|++.||+|||+
T Consensus 113 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~ 189 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGK 189 (360)
T ss_dssp EEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred EEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccc
Confidence 999999 999999997643 2348889999999999999999984
Q ss_pred ---------------cccccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 040641 302 ---------------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGP 362 (435)
Q Consensus 302 ---------------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~ 362 (435)
|||+++.... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 190 ~~~~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 190 KIQIYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp EEEEEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 4555544321 12345789999999999999999999999999999999999999864
No 207
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.3e-34 Score=265.92 Aligned_cols=227 Identities=21% Similarity=0.234 Sum_probs=175.1
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc---------cccHHHHHHHHHHhccCC-CCCceeEEEEEEe
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK---------TQGHRQFTAEMETLGKVK-HQNLVLLLGYCSF 250 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~ 250 (435)
..+|++.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999875 58899999986432 112356889999999996 9999999999999
Q ss_pred CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccc
Q 040641 251 DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLA 306 (435)
Q Consensus 251 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla 306 (435)
.+..++||||+++|+|.+++... ..+++.....++.+++.||+|||+ |||++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999999764 248889999999999999999996 89988
Q ss_pred ccccccCccccccccccCCCcCCcCCC------CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHh
Q 040641 307 RLISACETHVSTDIAGTLGYIPPEYGQ------SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKM 380 (435)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~ 380 (435)
+...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||..... ... ...+
T Consensus 172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~----~~~~ 241 (298)
T 1phk_A 172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ----MLM----LRMI 241 (298)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHH----HHHH
T ss_pred hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH----HHH----HHHH
Confidence 7654322 223467999999999763 45688999999999999999999999854211 111 1111
Q ss_pred ccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 381 KKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
...... ...+ ........+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~-~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 242 MSGNYQ-FGSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHTCCC-CCTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred hcCCcc-cCcc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111110 0001 11112235678899999999999999999974
No 208
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-33 Score=270.54 Aligned_cols=240 Identities=23% Similarity=0.266 Sum_probs=174.0
Q ss_pred cccCcceeeeecccCcceEEEEEc-CCCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEe-------
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSF------- 250 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------- 250 (435)
...+|++.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++|||||++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 456899999999999999999986 4689999999864432 234678899999999999999999999977
Q ss_pred -CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccc
Q 040641 251 -DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGL 305 (435)
Q Consensus 251 -~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGl 305 (435)
.+..++||||+++ +|...+.... ..+++..+..++.|++.||+|||+ |||+
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCceEEEEEeccCC-CHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 3468999999985 7777765432 348899999999999999999996 9999
Q ss_pred cccccccC---ccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhc
Q 040641 306 ARLISACE---THVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMK 381 (435)
Q Consensus 306 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 381 (435)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+.....
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~ 246 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE----QHQLALISQLCG 246 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHC
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhC
Confidence 98764221 122345678999999998765 5689999999999999999999999864321 112222222111
Q ss_pred cCCCC---ccccccc---------cCCCCHHH------HHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 382 KQQAD---DVLDPTV---------LNAGSKPM------MLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 382 ~~~~~---~~~~~~~---------~~~~~~~~------~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..... ....... ........ ...+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 11100 0000000 00001111 123678999999999999999999975
No 209
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.2e-34 Score=271.66 Aligned_cols=227 Identities=21% Similarity=0.290 Sum_probs=170.7
Q ss_pred Cccee-eeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEEE
Q 040641 184 KLTLV-DILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 184 ~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 258 (435)
+|.+. +.||+|+||.||+|+.. +++.||||.+.... ......+.+|+.++.++ +||||+++++++...+..++||
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~ 108 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL 108 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence 45555 88999999999999865 58999999987543 23457899999999999 4699999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccccc
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLISA 311 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~~~ 311 (435)
||+++|+|.+++... ....+++.....++.|++.||+|||+ |||+++....
T Consensus 109 e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 109 EYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp ECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred EecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 999999999887543 23458999999999999999999995 8888876543
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
. .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .. ...+..... .. .+
T Consensus 187 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~----~~~i~~~~~-~~-~~ 254 (327)
T 3lm5_A 187 A--CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ----ET----YLNISQVNV-DY-SE 254 (327)
T ss_dssp ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HH----HHHHHHTCC-CC-CT
T ss_pred c--cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----HH----HHHHHhccc-cc-Cc
Confidence 2 1223467999999999999899999999999999999999999998543211 11 111111110 00 00
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
... ......+.+++.+||+.||++|||+.++++
T Consensus 255 ~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 255 ETF----SSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp TTT----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 000 111234677889999999999999999874
No 210
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.2e-34 Score=276.91 Aligned_cols=234 Identities=20% Similarity=0.310 Sum_probs=175.7
Q ss_pred ccCcceeeeecccCcceEEEEEcCCCCEEEEEEcccccccc-----------------HHHHHHHHHHhccCCCCCceeE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQG-----------------HRQFTAEMETLGKVKHQNLVLL 244 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l 244 (435)
..+|++.+.||+|+||.||+|.. +++.||||.+....... .+.|.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45899999999999999999998 89999999986433211 1789999999999999999999
Q ss_pred EEEEEeCCeeEEEEecccCCCHHHH------HHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------
Q 040641 245 LGYCSFDEEKLLVYEYMVNGSLDLW------LRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------- 301 (435)
Q Consensus 245 ~g~~~~~~~~~lv~ey~~~g~L~~~------l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------- 301 (435)
++++...+..++||||+++|+|.++ +... ....+++..+..++.+++.||+|||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEc
Confidence 9999999999999999999999888 4331 13468999999999999999999994
Q ss_pred --------cccccccccccCccccccccccCCCcCCcCCCCC-CCCC-cccchhHHHHHHHHHhCCCCCCCCcccccCCc
Q 040641 302 --------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSR-MSTT-RGDVYSFGVILLELVTAKEPTGPEFQEKEGAN 371 (435)
Q Consensus 302 --------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~ 371 (435)
|||+++..... ......||+.|+|||...+. .++. ++|||||||++|||+||+.||...... ..
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~ 260 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---VE 260 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---HH
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---HH
Confidence 78887765332 23446799999999998876 6666 999999999999999999998643221 11
Q ss_pred HHHHHHHHhccCCCCccc------cccc---cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 372 LVGWVFQKMKKQQADDVL------DPTV---LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. ...+......... .+.. ...........+.+++.+||+.||++|||+.|+++
T Consensus 261 ~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 261 L----FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp H----HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred H----HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 1122211111000 0000 00000112235678899999999999999999985
No 211
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.2e-34 Score=279.76 Aligned_cols=175 Identities=25% Similarity=0.288 Sum_probs=142.5
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeC-----Ce
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD-----EE 253 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 253 (435)
..+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 367999999999999999999864 57899999997532 23456789999999999999999999999776 56
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.++||||+. |+|.++++.. ..+++.....++.|+++||.|||+ |||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP----IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 6999998753 348999999999999999999996 99999876
Q ss_pred cccCc---------------------cccccccccCCCcCCcCC-CCCCCCCcccchhHHHHHHHHHhCCCCCC
Q 040641 310 SACET---------------------HVSTDIAGTLGYIPPEYG-QSRMSTTRGDVYSFGVILLELVTAKEPTG 361 (435)
Q Consensus 310 ~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~SfGvil~El~tg~~p~~ 361 (435)
..... ...+..+||+.|+|||++ ....++.++||||+||++|||++|..|+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 43221 123567899999999974 56779999999999999999998766553
No 212
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.6e-34 Score=267.37 Aligned_cols=231 Identities=20% Similarity=0.320 Sum_probs=171.8
Q ss_pred ccccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--cccHHHHHHHHHHhccCC--CCCceeEEEEEEeCCe
Q 040641 178 FQQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVK--HQNLVLLLGYCSFDEE 253 (435)
Q Consensus 178 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~ 253 (435)
......+|++.+.||+|+||.||+|...+++.||||.+.... ....+.+.+|++++.+++ ||||+++++++...+.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 344556799999999999999999998889999999986432 234567899999999997 5999999999999999
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------ccccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------DFGLARLIS 310 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------DfGla~~~~ 310 (435)
.++||| +.+|+|.+++... ..+++..+..++.++++||+|||+ |||+++...
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC--
T ss_pred EEEEEe-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeecccccccc
Confidence 999999 6689999999764 247888999999999999999996 899987654
Q ss_pred ccCc-cccccccccCCCcCCcCCCC-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHH
Q 040641 311 ACET-HVSTDIAGTLGYIPPEYGQS-----------RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQ 378 (435)
Q Consensus 311 ~~~~-~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~ 378 (435)
.... .......||+.|+|||...+ ..++.++|||||||++|||+||+.||..... .......
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~ 251 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHA 251 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH------HHHHHHH
Confidence 3221 12234579999999998765 4688899999999999999999999854221 1111122
Q ss_pred HhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 379 KMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
......... .+ ... ...+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~--~~---~~~----~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 252 IIDPNHEIE--FP---DIP----EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHCTTSCCC--CC---CCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcccccC--Cc---ccc----hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 221111000 01 111 125677888999999999999999985
No 213
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-34 Score=274.32 Aligned_cols=226 Identities=22% Similarity=0.274 Sum_probs=169.1
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--------ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--------QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE 253 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 253 (435)
.+|.+.+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++...+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 47899999999999999999865 578999999864321 12345889999999999999999999987654
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLA 306 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla 306 (435)
.++||||+++|+|.+++... ..+++.....++.|+++||+|||+ |||++
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EEEEEECCTTEETHHHHSTT----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred eEEEEecCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 89999999999999988643 358889999999999999999995 78888
Q ss_pred ccccccCccccccccccCCCcCCcCC---CCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccC
Q 040641 307 RLISACETHVSTDIAGTLGYIPPEYG---QSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQ 383 (435)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 383 (435)
+..... .......||+.|+|||++ ....++.++|||||||++|||+||+.||..... ...+...+.. .
T Consensus 165 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~~~~~----~ 235 (322)
T 2ycf_A 165 KILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---QVSLKDQITS----G 235 (322)
T ss_dssp EECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC---SSCHHHHHHH----T
T ss_pred eecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---HHHHHHHHHh----C
Confidence 765432 222345799999999985 356789999999999999999999999864322 1122222211 1
Q ss_pred CCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 384 QADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
... ..+..... ....+.+++.+||+.||++|||+.++++
T Consensus 236 ~~~--~~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KYN--FIPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCC--CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccc--cCchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 110 00111011 1235678899999999999999999974
No 214
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1e-33 Score=272.90 Aligned_cols=234 Identities=21% Similarity=0.209 Sum_probs=164.1
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCC------
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE------ 252 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 252 (435)
..+|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357999999999999999999854 58899999986532 233467889999999999999999999997655
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++||||+++ +|.+++.. .+++.....++.|++.||+|||+ |||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 67999999974 78777752 27888899999999999999996 9999976
Q ss_pred ccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhcc------
Q 040641 309 ISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKK------ 382 (435)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 382 (435)
.... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .....+......
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI----DQWNKVIEQLGTPCPEFM 250 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHC-CCCCCHHHH
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHHHH
Confidence 5432 2234568999999999998889999999999999999999999998543211 111111100000
Q ss_pred -------------C-CCCc----cccccccCCC----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 383 -------------Q-QADD----VLDPTVLNAG----SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 383 -------------~-~~~~----~~~~~~~~~~----~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .... ...+....+. .......+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 0000 0000000000 1122456788999999999999999999985
No 215
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-34 Score=275.65 Aligned_cols=232 Identities=21% Similarity=0.234 Sum_probs=166.5
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeCC------
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDE------ 252 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 252 (435)
..+|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35799999999999999999986 468999999996432 223467899999999999999999999997653
Q ss_pred eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccc
Q 040641 253 EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARL 308 (435)
Q Consensus 253 ~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~ 308 (435)
..++||||+ +++|.++++.. .+++.....++.|+++||+|||+ |||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 88999998752 37888999999999999999996 9999987
Q ss_pred ccccCccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCC--
Q 040641 309 ISACETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQA-- 385 (435)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 385 (435)
... ..+..+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+....+.........
T Consensus 178 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~l~~i~~~~g~~~~~~ 249 (367)
T 1cm8_A 178 ADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH----LDQLKEIMKVTGTPPAEF 249 (367)
T ss_dssp CCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCCCCHHH
T ss_pred ccc----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcCCCCHHH
Confidence 542 2345679999999998766 6789999999999999999999999864321 1111111111110000
Q ss_pred ----------------CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 386 ----------------DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 386 ----------------~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
........ ..........+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00000000 0000011235678888999999999999999986
No 216
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.1e-34 Score=279.71 Aligned_cols=231 Identities=14% Similarity=0.076 Sum_probs=155.0
Q ss_pred ccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc---ccHHHHHHHH---HHhccCCCCCceeEE-------
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT---QGHRQFTAEM---ETLGKVKHQNLVLLL------- 245 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~H~niv~l~------- 245 (435)
.....|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+ ++|+. +|||||+++
T Consensus 59 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~ 137 (371)
T 3q60_A 59 QGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPS 137 (371)
T ss_dssp CCEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCC
T ss_pred CCceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeee
Confidence 34456899999999999999999864 688999999976432 2345677784 55555 799988755
Q ss_pred EEEEeC-----------------CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHH------HHHHHHhhhccceeec-
Q 040641 246 GYCSFD-----------------EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKR------YKIACSSARGLAFLHQ- 301 (435)
Q Consensus 246 g~~~~~-----------------~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~------~~i~~~ia~gl~yLH~- 301 (435)
+++... ...++|||||+ |+|.+++..... .+.+..+ ..++.|+++||+|||+
T Consensus 138 d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~ 213 (371)
T 3q60_A 138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK 213 (371)
T ss_dssp EEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence 455433 23799999999 899999986421 2344455 7788999999999996
Q ss_pred -----------------------cccccccccccCccccccccccCCCcCCcCCCC--CCCCCcccchhHHHHHHHHHhC
Q 040641 302 -----------------------DFGLARLISACETHVSTDIAGTLGYIPPEYGQS--RMSTTRGDVYSFGVILLELVTA 356 (435)
Q Consensus 302 -----------------------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~SfGvil~El~tg 356 (435)
|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 99999865421 113467799999999887 6799999999999999999999
Q ss_pred CCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 357 KEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 357 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
+.||.......... ................+........+.+++.+||+.||++|||+.|+++
T Consensus 290 ~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGS---------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTC---------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccc---------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99986542211100 0000000000000000100112235678889999999999999999863
No 217
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.3e-33 Score=291.13 Aligned_cols=224 Identities=22% Similarity=0.290 Sum_probs=177.4
Q ss_pred cccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccc---ccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeE
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQA---KTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKL 255 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 255 (435)
...+|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467999999999999999999865 5789999999753 233456788999999987 7999999999999999999
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++|+|..+++... .+++..+..++.|++.||+|||+ |||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998653 48899999999999999999996 9999986432
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
. .......+||+.|||||++.+..++.++|||||||++|||+||+.||..... .. ++..+..... .-|
T Consensus 495 ~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~----~~----~~~~i~~~~~---~~p 562 (674)
T 3pfq_A 495 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DE----LFQSIMEHNV---AYP 562 (674)
T ss_dssp T-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH----HH----HHHHHHSSCC---CCC
T ss_pred C-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH----HH----HHHHHHhCCC---CCC
Confidence 2 2234457899999999999999999999999999999999999999864321 11 1222222111 011
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCCH-----HHHH
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPTM-----LHVL 427 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~-----~evl 427 (435)
. ....++.+++..||+.||++||++ .||+
T Consensus 563 ~-------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 563 K-------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp T-------TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred c-------cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 1 112356788889999999999997 6665
No 218
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=262.32 Aligned_cols=225 Identities=20% Similarity=0.320 Sum_probs=169.2
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc----cccHHHHHHHHHHhccCCCCCceeEEEEEE--eCCeeE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK----TQGHRQFTAEMETLGKVKHQNLVLLLGYCS--FDEEKL 255 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~~ 255 (435)
.+|.+.+.||+|+||.||+|... +++.||||.+.... ......+.+|++++++++||||+++++++. ..+..+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 57889999999999999999864 58899999997543 234567999999999999999999999984 455789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+++| |.+++.... ...+++.....++.|+++||+|||+ |||+++....
T Consensus 85 lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 999999987 777776532 2358899999999999999999996 8998876543
Q ss_pred cC-ccccccccccCCCcCCcCCCCCC--CCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 312 CE-THVSTDIAGTLGYIPPEYGQSRM--STTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 312 ~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
.. ........||+.|+|||+..+.. ++.++|||||||++|||++|+.||.... ... ....+......
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~-~~~~i~~~~~~-- 231 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-------IYK-LFENIGKGSYA-- 231 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHH-HHHHHHHCCCC--
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-------HHH-HHHHHhcCCCC--
Confidence 21 12223457999999999876543 4789999999999999999999985421 111 11222221110
Q ss_pred ccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 389 LDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.... ....+.+++.+||+.||++|||+.|+++
T Consensus 232 ----~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 232 ----IPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp ----CCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----CCCc----cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0111 1124667889999999999999999985
No 219
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-34 Score=284.15 Aligned_cols=169 Identities=24% Similarity=0.323 Sum_probs=129.1
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeC-----Cee
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD-----EEK 254 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 254 (435)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57999999999999999999865 68899999986532 23456789999999999999999999998543 568
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
|+||||+ +|+|..+++.. ..+++.....++.|++.||+|||+ |||+|+...
T Consensus 133 ~lv~e~~-~~~L~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP----VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEecc-ccchhhhcccC----CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9999998 57899888653 348899999999999999999996 999998764
Q ss_pred ccCc--------------------------cccccccccCCCcCCcCC-CCCCCCCcccchhHHHHHHHHHhC
Q 040641 311 ACET--------------------------HVSTDIAGTLGYIPPEYG-QSRMSTTRGDVYSFGVILLELVTA 356 (435)
Q Consensus 311 ~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~SfGvil~El~tg 356 (435)
.... ...+..+||+.|+|||++ ....++.++|||||||++|||+||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 2211 123456889999999975 567799999999999999999994
No 220
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.9e-34 Score=269.36 Aligned_cols=237 Identities=20% Similarity=0.315 Sum_probs=154.8
Q ss_pred cccccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHH-HhccCCCCCceeEEEEEEeCCe
Q 040641 177 MFQQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEME-TLGKVKHQNLVLLLGYCSFDEE 253 (435)
Q Consensus 177 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~ 253 (435)
.+.....+|++.+.||+|+||.||+|... +++.||||++..... ....++..|+. +++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~ 95 (327)
T 3aln_A 16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD 95 (327)
T ss_dssp EECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSE
T ss_pred hcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCc
Confidence 34556678999999999999999999874 688999999965432 23345666666 7888999999999999999999
Q ss_pred eEEEEecccCCCHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNAT-GSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLAR 307 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~ 307 (435)
.++||||+++ +|.+++.... .....+++.....++.++++||.|||+ |||+++
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred eEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 9999999985 7877765321 123458899999999999999999985 888887
Q ss_pred cccccCccccccccccCCCcCCcCC----CCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccC
Q 040641 308 LISACETHVSTDIAGTLGYIPPEYG----QSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQ 383 (435)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 383 (435)
..... .......||+.|+|||++ .+..++.++|||||||++|||+||+.||...... .... ......
T Consensus 175 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~-~~~~~~ 245 (327)
T 3aln_A 175 QLVDS--IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV------FDQL-TQVVKG 245 (327)
T ss_dssp C--------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCS
T ss_pred ecccc--cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH------HHHH-HHHhcC
Confidence 65432 122334799999999998 4567899999999999999999999998542110 0000 001011
Q ss_pred CCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 384 QADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .+.............+.+++.+||+.||++|||+.+|++
T Consensus 246 ~-----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 246 D-----PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp C-----CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C-----CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0 011111111112235678889999999999999999964
No 221
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8e-34 Score=268.70 Aligned_cols=238 Identities=24% Similarity=0.297 Sum_probs=173.1
Q ss_pred ccCcceeeeecccCcceEEEEEc--CCCCEEEEEEcccccc--ccHHHHHHHHHHhccC---CCCCceeEEEEEE-----
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL--PDGKTVAVKKFSQAKT--QGHRQFTAEMETLGKV---KHQNLVLLLGYCS----- 249 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~----- 249 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+..... .....+.+|+.+++.+ +||||++++++|.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 46799999999999999999987 4578999999864332 1233567788777666 8999999999987
Q ss_pred eCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccc
Q 040641 250 FDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGL 305 (435)
Q Consensus 250 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGl 305 (435)
.....++||||++ |+|.+++.... ...+++.....++.|+++||+|||+ |||+
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred CCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 4567899999998 69999987643 2348899999999999999999996 8999
Q ss_pred cccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCC
Q 040641 306 ARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQA 385 (435)
Q Consensus 306 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (435)
++..... .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ......+.........
T Consensus 167 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 167 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD----VDQLGKILDVIGLPGE 240 (326)
T ss_dssp CCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCCCCG
T ss_pred cccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHHHcCCCCc
Confidence 8765432 223456799999999999888899999999999999999999999864321 1122222221111100
Q ss_pred Ccc----ccc---------cccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 386 DDV----LDP---------TVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 386 ~~~----~~~---------~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
... ..+ .............+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 000 0000000112235668889999999999999999984
No 222
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4e-34 Score=274.86 Aligned_cols=238 Identities=20% Similarity=0.189 Sum_probs=166.3
Q ss_pred ccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccc-----------cHHHHHHHHHHhccCCCCCceeEEEEE
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQ-----------GHRQFTAEMETLGKVKHQNLVLLLGYC 248 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~g~~ 248 (435)
....+|++.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++|||||++++++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 98 (362)
T 3pg1_A 19 AMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98 (362)
T ss_dssp HTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred HhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeE
Confidence 345689999999999999999999888999999998543211 136799999999999999999999998
Q ss_pred EeC-----CeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------
Q 040641 249 SFD-----EEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------- 301 (435)
Q Consensus 249 ~~~-----~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------- 301 (435)
... ...++||||++ |+|.+++... ...+++.....++.|++.||+|||+
T Consensus 99 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~k 174 (362)
T 3pg1_A 99 VHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDIT 174 (362)
T ss_dssp EECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred EeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEE
Confidence 543 35799999998 6888887643 2358999999999999999999996
Q ss_pred --cccccccccccCccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHH
Q 040641 302 --DFGLARLISACETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQ 378 (435)
Q Consensus 302 --DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~ 378 (435)
|||+++..... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...... .....+..
T Consensus 175 l~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~ 248 (362)
T 3pg1_A 175 ICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY----NQLNKIVE 248 (362)
T ss_dssp ECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHH
T ss_pred EEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHH
Confidence 89998754432 22344678999999998766 67899999999999999999999998643211 11111111
Q ss_pred HhccCCC-------------------CccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 379 KMKKQQA-------------------DDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 379 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
....... ........ ..........+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW-TAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCH-HHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HcCCCChHHhhhccchhhhHHHHhhcccCChhhH-HhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1111000 00000000 0000011234678899999999999999999985
No 223
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.2e-33 Score=264.42 Aligned_cols=226 Identities=22% Similarity=0.343 Sum_probs=163.6
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEe-----------
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSF----------- 250 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----------- 250 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+... ....+.+.+|+.++++++||||+++++++..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 46889999999999999999864 6899999999643 2345678999999999999999999998865
Q ss_pred --CCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccc
Q 040641 251 --DEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFG 304 (435)
Q Consensus 251 --~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfG 304 (435)
.+..++||||+++|+|.+++.... ..+++.....++.|+++||+|||+ |||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 356789999999999999997532 346788889999999999999996 899
Q ss_pred ccccccccC-------------ccccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHhCCCCCCCCcccccCC
Q 040641 305 LARLISACE-------------THVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGA 370 (435)
Q Consensus 305 la~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~ 370 (435)
+++...... ........||+.|+|||.+.+. .++.++|||||||++|||++ |+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~----- 233 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME----- 233 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh-----
Confidence 987654211 1122345789999999988754 78999999999999999998 5432111
Q ss_pred cHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 371 NLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
... ....+..... ...+... ......+.+++.+||+.||++|||+.++++
T Consensus 234 -~~~-~~~~~~~~~~--~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 234 -RVN-ILKKLRSVSI--EFPPDFD----DNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -HHH-HHHHHHSTTC--CCCTTCC----TTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -HHH-HHHhcccccc--ccCcccc----ccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111 1122211110 0111111 112234667889999999999999999985
No 224
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=267.98 Aligned_cols=236 Identities=21% Similarity=0.223 Sum_probs=165.9
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEE------------
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCS------------ 249 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~------------ 249 (435)
.+|.+.+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57899999999999999999876 48899999987665556678999999999999999999999873
Q ss_pred --eCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------c
Q 040641 250 --FDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------D 302 (435)
Q Consensus 250 --~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------D 302 (435)
.....++||||++ |+|.+++.. ..+++.....++.|+++||+|||+ |
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467899999998 699998864 247888999999999999999995 8
Q ss_pred ccccccccccCc--cccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHH
Q 040641 303 FGLARLISACET--HVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQK 379 (435)
Q Consensus 303 fGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~ 379 (435)
||+++....... .......||..|+|||.... ..++.++|||||||++|||+||+.||...... .....+...
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~~~~~ 240 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL----EQMQLILES 240 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHh
Confidence 998876543211 12234567999999997654 67899999999999999999999998643211 111111111
Q ss_pred hccCC----------CCc-----ccccccc-CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 380 MKKQQ----------ADD-----VLDPTVL-NAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 380 ~~~~~----------~~~-----~~~~~~~-~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
..... ... ...+... ..........+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00000 000 0000000 0000011235678999999999999999999975
No 225
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.9e-34 Score=279.11 Aligned_cols=227 Identities=21% Similarity=0.292 Sum_probs=160.7
Q ss_pred cceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEEEecccC
Q 040641 185 LTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLVYEYMVN 263 (435)
Q Consensus 185 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 263 (435)
+...++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++...+..++|||||.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 4557889999999998776667999999998643 235678999999876 89999999999999999999999995
Q ss_pred CCHHHHHHhhCCCCCC---CCHHHHHHHHHHhhhccceeec-------------------------------------cc
Q 040641 264 GSLDLWLRNATGSHEV---LDRAKRYKIACSSARGLAFLHQ-------------------------------------DF 303 (435)
Q Consensus 264 g~L~~~l~~~~~~~~~---l~~~~~~~i~~~ia~gl~yLH~-------------------------------------Df 303 (435)
|+|.+++......... ..+.....++.|++.||+|||+ ||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 6999999764322111 1233456799999999999995 67
Q ss_pred cccccccccCcc---ccccccccCCCcCCcCCCC-------CCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcH
Q 040641 304 GLARLISACETH---VSTDIAGTLGYIPPEYGQS-------RMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANL 372 (435)
Q Consensus 304 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~ 372 (435)
|+++........ .....+||+.|+|||++.+ ..++.++|||||||++|||+| |+.||...... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~ 247 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-----E 247 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-----H
Confidence 887765432211 1234579999999998765 678999999999999999999 88898543221 1
Q ss_pred HHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 373 VGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. +..... .. +.............+.+++.+||+.||++|||+.||++
T Consensus 248 ~~-i~~~~~--~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SN-IIRGIF--SL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH-HHHTCC--CC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-HhcCCC--Cc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 111100 00 11111223445567889999999999999999999975
No 226
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.6e-34 Score=279.07 Aligned_cols=235 Identities=22% Similarity=0.240 Sum_probs=167.2
Q ss_pred cCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe------eEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE------KLL 256 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~l 256 (435)
.+|++.+.||+|+||.||+|+...+..||+|++...... ..+|+++++.++|||||++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 478999999999999999999877777999988543321 2379999999999999999999965443 789
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGLARLISA 311 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGla~~~~~ 311 (435)
||||++++.+....... .....+++.....++.|+++||+|||+ |||+++....
T Consensus 116 v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYA-KLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp EEECCSEEHHHHHHHHH-HTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EeeccCccHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 99999876554433221 223458899999999999999999996 9999987643
Q ss_pred cCccccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCC------
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQ------ 384 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 384 (435)
.. ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... .....+........
T Consensus 195 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 195 GE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI----DQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp TC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCHHHHHH
T ss_pred CC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHHHHHh
Confidence 22 22346789999999987654 5899999999999999999999998643211 11111111111000
Q ss_pred ----CCccccccccCCC-----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 385 ----ADDVLDPTVLNAG-----SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 385 ----~~~~~~~~~~~~~-----~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.....-+...... .......+.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000000000000 0011235778999999999999999999985
No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-34 Score=278.55 Aligned_cols=242 Identities=21% Similarity=0.226 Sum_probs=157.2
Q ss_pred Ccce-eeeecccCcceEEEEEcC---CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEe--CCeeEEE
Q 040641 184 KLTL-VDILEDGGFGTVYKATLP---DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSF--DEEKLLV 257 (435)
Q Consensus 184 ~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv 257 (435)
.|++ .++||+|+||.||+|+.. +++.||||++.... ....+.+|+++|++++|||||++++++.. ....++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3454 457999999999999865 47889999997543 23578899999999999999999999954 6788999
Q ss_pred EecccCCCHHHHHHhhC-----CCCCCCCHHHHHHHHHHhhhccceeec----------------------------ccc
Q 040641 258 YEYMVNGSLDLWLRNAT-----GSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFG 304 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfG 304 (435)
|||++ |+|.+++.... .....+++.....++.|++.||+|||+ |||
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 99997 57777765321 112248899999999999999999995 899
Q ss_pred ccccccccCc--cccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccc-----cCCcHHHHH
Q 040641 305 LARLISACET--HVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEK-----EGANLVGWV 376 (435)
Q Consensus 305 la~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~-----~~~~~~~~~ 376 (435)
+++....... ......+||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... ........+
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 9887643211 22344689999999998876 458999999999999999999999986432210 001122222
Q ss_pred HHHhccCCCCccccc----------------cccCCCCHH--------HHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 377 FQKMKKQQADDVLDP----------------TVLNAGSKP--------MMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 377 ~~~~~~~~~~~~~~~----------------~~~~~~~~~--------~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
...+.........+. ......... ....+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 222221111000000 000000000 0124678899999999999999999985
No 228
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=263.75 Aligned_cols=236 Identities=18% Similarity=0.262 Sum_probs=158.4
Q ss_pred cccccccccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccc--cHHHHHHHHHHhccCCCCCceeEEEEEE
Q 040641 173 INISMFQQPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQ--GHRQFTAEMETLGKVKHQNLVLLLGYCS 249 (435)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~ 249 (435)
++...+.....+|++.+.||+|+||.||+|+.. +|+.||||.+...... ..+.+.++..+++.++||||+++++++.
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~ 94 (318)
T 2dyl_A 15 IGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI 94 (318)
T ss_dssp ESSSEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred ecchhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe
Confidence 344456667788999999999999999999875 6899999999654322 2233455556788899999999999999
Q ss_pred eCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------ccc
Q 040641 250 FDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFG 304 (435)
Q Consensus 250 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfG 304 (435)
..+..++||||+ ++.+..+..... ..+++.....++.++++||+|||+ |||
T Consensus 95 ~~~~~~lv~e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg 170 (318)
T 2dyl_A 95 TNTDVFIAMELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFG 170 (318)
T ss_dssp CSSEEEEEECCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred cCCcEEEEEecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECC
Confidence 999999999999 566665554322 348889999999999999999995 788
Q ss_pred ccccccccCccccccccccCCCcCCcCCC-----CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHH
Q 040641 305 LARLISACETHVSTDIAGTLGYIPPEYGQ-----SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQK 379 (435)
Q Consensus 305 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~ 379 (435)
+++...... ......||+.|+|||++. ...++.++|||||||++|||+||+.||..... ........
T Consensus 171 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~ 242 (318)
T 2dyl_A 171 ISGRLVDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT------DFEVLTKV 242 (318)
T ss_dssp TC----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHH
T ss_pred CchhccCCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc------cHHHHHHH
Confidence 876554321 223457999999999874 55688999999999999999999999854211 11111111
Q ss_pred hccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 380 MKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.... ....... . .....+.+++.+||+.||++|||+.++++
T Consensus 243 ~~~~-~~~~~~~----~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 243 LQEE-PPLLPGH----M---GFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHSC-CCCCCSS----S---CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred hccC-CCCCCcc----C---CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1111 1111000 0 01124677889999999999999999874
No 229
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.9e-33 Score=270.31 Aligned_cols=236 Identities=22% Similarity=0.273 Sum_probs=172.7
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeC-----CeeE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFD-----EEKL 255 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~ 255 (435)
.+|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++|||||++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 57999999999999999999864 578999999975332 2346789999999999999999999999765 3689
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccc
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISA 311 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~ 311 (435)
+||||+. |+|.+++... .+++.....++.|++.||+|||+ |||+++....
T Consensus 107 iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 9999997 5899988753 38889999999999999999996 9999987653
Q ss_pred cCcc--ccccccccCCCcCCcCCC-CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 312 CETH--VSTDIAGTLGYIPPEYGQ-SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 312 ~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
.... ......||+.|+|||++. ...++.++|||||||++|||+||+.||..... ......+............
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY----LDQLNHILGILGSPSQEDL 256 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG----GGHHHHHHHHHCSCCHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh----HHHHHHHHHHhCCCCHHHH
Confidence 2221 124468999999999754 45589999999999999999999999854322 1222222211111100000
Q ss_pred -----------c--cccccCCC----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 389 -----------L--DPTVLNAG----SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 389 -----------~--~~~~~~~~----~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. .+...... .......+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00000000 0001235678899999999999999999985
No 230
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=275.96 Aligned_cols=228 Identities=22% Similarity=0.295 Sum_probs=163.3
Q ss_pred cccccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEE
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 257 (435)
.....+|...++||+|+||.||.....+++.||||++...... .+.+|+++++++ +|||||++++++......++|
T Consensus 20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 20 IVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 3445678999999999999966555557899999998653322 356899999999 899999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------------ccccccc
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------------DFGLARL 308 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------------DfGla~~ 308 (435)
||||. |+|.+++..... ...+.....++.|+++||+|||+ |||+++.
T Consensus 97 ~E~~~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCS-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCC-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 99996 699999976432 23334456899999999999995 8998877
Q ss_pred ccccCc--cccccccccCCCcCCcCCC---CCCCCCcccchhHHHHHHHHHh-CCCCCCCCcccccCCcHHHHHHHHhcc
Q 040641 309 ISACET--HVSTDIAGTLGYIPPEYGQ---SRMSTTRGDVYSFGVILLELVT-AKEPTGPEFQEKEGANLVGWVFQKMKK 382 (435)
Q Consensus 309 ~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~SfGvil~El~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 382 (435)
...... ......+||+.|+|||++. ...++.++|||||||++|||+| |..||..... .. .......
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-----~~---~~~~~~~ 244 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-----RQ---ANILLGA 244 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-----HH---HHHHTTC
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-----HH---HHHHhcc
Confidence 643221 2234567999999999887 4567889999999999999999 8888743211 11 1111111
Q ss_pred CCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 383 QQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. .....+ .......+.+++.+||+.||++|||+.||++
T Consensus 245 ~~-~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 CS-LDCLHP------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CC-CTTSCT------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC-ccccCc------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 11 111111 1122334668899999999999999999983
No 231
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.7e-33 Score=274.82 Aligned_cols=174 Identities=24% Similarity=0.260 Sum_probs=145.8
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccC------CCCCceeEEEEEEeCCee
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKV------KHQNLVLLLGYCSFDEEK 254 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~g~~~~~~~~ 254 (435)
..+|++.+.||+|+||.||+|... +++.||||+++... ...+.+.+|++++..+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 357999999999999999999865 58899999996532 2345677888887766 677999999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------ccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ--------------------------DFGLARL 308 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~--------------------------DfGla~~ 308 (435)
++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+ |||+++.
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 99999996 68998887643 2348899999999999999999995 8998865
Q ss_pred ccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 040641 309 ISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPE 363 (435)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~ 363 (435)
... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 252 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 252 EHQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TTC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 432 223467999999999998889999999999999999999999998543
No 232
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.6e-34 Score=273.62 Aligned_cols=241 Identities=21% Similarity=0.201 Sum_probs=162.1
Q ss_pred ccccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe-----
Q 040641 180 QPLLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE----- 253 (435)
Q Consensus 180 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----- 253 (435)
....+|++.+.||+|+||.||+|+.. +++.||||++..... ....+.+|++.++.++|||||++++++...+.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 34568999999999999999999864 589999999854332 23456788888999999999999999976443
Q ss_pred --eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceee--c-------------------------ccc
Q 040641 254 --KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLH--Q-------------------------DFG 304 (435)
Q Consensus 254 --~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH--~-------------------------DfG 304 (435)
.++||||+++ +|...+.........+++.....++.+++.||+||| + |||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 7899999986 555545443333456888899999999999999999 4 899
Q ss_pred ccccccccCccccccccccCCCcCCcCCCCC-CCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccC
Q 040641 305 LARLISACETHVSTDIAGTLGYIPPEYGQSR-MSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQ 383 (435)
Q Consensus 305 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 383 (435)
+++...... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||...... .....+.......
T Consensus 178 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 178 SAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA----GQLHEIVRVLGCP 251 (360)
T ss_dssp TCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCC
T ss_pred CceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH----HHHHHHHHHcCCC
Confidence 998765432 22346789999999987654 5899999999999999999999998643221 1111111111100
Q ss_pred C-----------C-Ccccccc------ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 384 Q-----------A-DDVLDPT------VLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 384 ~-----------~-~~~~~~~------~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. . .+..+.. ............+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 0 0000000 000011112346788999999999999999999975
No 233
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=9e-34 Score=272.47 Aligned_cols=232 Identities=21% Similarity=0.256 Sum_probs=155.1
Q ss_pred cCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEeC------Ce
Q 040641 183 LKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFD------EE 253 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~ 253 (435)
.+|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++|||||++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 6799999999999999999985 468899999996532 23456788999999999999999999998654 56
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.++||||+ +++|.+++.. ..+++.....++.|+++||+|||+ |||+++..
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred EEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 79999999 7899888864 248899999999999999999996 89998765
Q ss_pred cccCccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCC--
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQAD-- 386 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 386 (435)
.. ..+...||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+..........
T Consensus 183 ~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 183 AD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCSCCHHHH
T ss_pred cc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHHH
Confidence 42 1345689999999998776 6789999999999999999999999854321 11222222211110000
Q ss_pred -cc--------cc--ccccCCCCH----HHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 387 -DV--------LD--PTVLNAGSK----PMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 387 -~~--------~~--~~~~~~~~~----~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.+ +. +........ .....+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00 00 000000000 01134678889999999999999999975
No 234
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.3e-33 Score=266.74 Aligned_cols=227 Identities=18% Similarity=0.199 Sum_probs=145.5
Q ss_pred cCccee-eeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCCCCCceeEEEEEEe----CCeeEE
Q 040641 183 LKLTLV-DILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNLVLLLGYCSF----DEEKLL 256 (435)
Q Consensus 183 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l 256 (435)
.+|.+. ++||+|+||.||+|+.. +++.||||.+.... ....+....+..++||||+++++++.. ....++
T Consensus 28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 567774 57999999999999875 68999999986422 111222234566799999999999876 445899
Q ss_pred EEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------cccccccc
Q 040641 257 VYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLARLI 309 (435)
Q Consensus 257 v~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla~~~ 309 (435)
||||+++|+|.+++.... ...+++.....++.|+++||+|||+ |||+++..
T Consensus 104 v~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp EEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 999999999999997642 2458999999999999999999995 78887654
Q ss_pred cccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccc
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVL 389 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (435)
... ......||+.|+|||++....++.++|||||||++|||+||+.||........ ............. ..
T Consensus 182 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~-~~- 252 (336)
T 3fhr_A 182 TQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI----SPGMKRRIRLGQY-GF- 252 (336)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------CC-
T ss_pred ccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh----hhhHHHhhhcccc-cc-
Confidence 321 22345789999999999888899999999999999999999999854322111 0000111110000 00
Q ss_pred cccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 390 DPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
+ .+........+.+++.+||+.||++|||+.|+++
T Consensus 253 -~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 253 -P---NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -C---TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -C---chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 0111112235678889999999999999999986
No 235
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.4e-33 Score=268.44 Aligned_cols=230 Identities=21% Similarity=0.226 Sum_probs=166.9
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCee-----
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEK----- 254 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~----- 254 (435)
.+|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++|||||++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 57899999999999999999864 588999999975332 2346788999999999999999999999877655
Q ss_pred -EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 255 -LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 255 -~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
++||||+. |+|..++.. .+++.....++.+++.||+|||+ |||+++..
T Consensus 122 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred EEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999998 688777632 38899999999999999999996 89998765
Q ss_pred cccCccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCcc
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDV 388 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (435)
.. ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+........ .+.
T Consensus 195 ~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~-~~~ 265 (371)
T 4exu_A 195 DA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY----LDQLTQILKVTGVPG-TEF 265 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCCCC-HHH
T ss_pred cc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCc-HHH
Confidence 42 2234678999999998776 7889999999999999999999999864321 111111111110000 000
Q ss_pred cc--------------ccccCCC----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 389 LD--------------PTVLNAG----SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 389 ~~--------------~~~~~~~----~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.. +...... .......+.+++.+||+.||++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 0000000 0011235678899999999999999999975
No 236
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.5e-33 Score=269.91 Aligned_cols=237 Identities=24% Similarity=0.281 Sum_probs=170.8
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc-ccHHHHHHHHHHhccCCCCCceeEEEEEEeC-----Cee
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-QGHRQFTAEMETLGKVKHQNLVLLLGYCSFD-----EEK 254 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 254 (435)
..+|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 357899999999999999999865 588999999964332 2346788999999999999999999998764 678
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------ccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLIS 310 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~ 310 (435)
++||||+. |+|.+++... .+++.....++.|++.||+|||+ |||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 6899988752 48899999999999999999996 999998754
Q ss_pred ccCcc---------ccccccccCCCcCCcCCC-CCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHh
Q 040641 311 ACETH---------VSTDIAGTLGYIPPEYGQ-SRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKM 380 (435)
Q Consensus 311 ~~~~~---------~~~~~~gt~~y~aPE~~~-~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~ 380 (435)
..... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~ 239 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY----RHQLLLIFGII 239 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHH
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHHHh
Confidence 32111 122357899999999754 46789999999999999999999999864321 11111111111
Q ss_pred ccCCCCcccc--------------ccccCCC----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 381 KKQQADDVLD--------------PTVLNAG----SKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 381 ~~~~~~~~~~--------------~~~~~~~----~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
.......... +...... .......+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1100000000 0000000 0011235678899999999999999999985
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.6e-32 Score=265.57 Aligned_cols=173 Identities=24% Similarity=0.238 Sum_probs=145.2
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCC-CC-----CceeEEEEEEeCCee
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-HQ-----NLVLLLGYCSFDEEK 254 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~g~~~~~~~~ 254 (435)
..+|++.+.||+|+||.||+|+.. +++.||||+++... ....++.+|++++..++ |+ +||++++++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 468999999999999999999865 57899999997432 23456778888888775 44 499999999999999
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------------ccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------------DFGLA 306 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------------DfGla 306 (435)
++||||++ |+|.+++.... ...+++.....++.|++.||+|||. |||++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 99999996 59999987643 2348899999999999999999982 88888
Q ss_pred ccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 040641 307 RLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGP 362 (435)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~ 362 (435)
+..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 765421 2346799999999999998999999999999999999999999864
No 238
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1e-33 Score=286.93 Aligned_cols=249 Identities=22% Similarity=0.283 Sum_probs=174.6
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccc-ccccHHHHHHHHHHhccCCCCCceeEEEEEEe------CCe
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQA-KTQGHRQFTAEMETLGKVKHQNLVLLLGYCSF------DEE 253 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~~ 253 (435)
..+|++.+.||+|+||.||+|... +|+.||||.+... .....+.|.+|++++++++|||||++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 367899999999999999999864 5889999998654 23345679999999999999999999998755 667
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec---------------------------ccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ---------------------------DFGLA 306 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~---------------------------DfGla 306 (435)
.++||||+++|+|.+++.... ....+++.....++.+++.||+|||+ |||++
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 899999999999999997643 22347888899999999999999995 88888
Q ss_pred ccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHH-HHHHH-HhccCC
Q 040641 307 RLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLV-GWVFQ-KMKKQQ 384 (435)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~-~~~~~-~~~~~~ 384 (435)
+..... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||............. ..... ......
T Consensus 172 ~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 172 KELDQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CBTTSC--CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred cccccc--cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence 765432 22345689999999999999999999999999999999999999986432110000000 00000 000000
Q ss_pred CCcc--cccc--ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHH-----HHHHHhhh
Q 040641 385 ADDV--LDPT--VLNAGSKPMMLKMLRIAADCVADNPATRPTMLH-----VLKLLHEI 433 (435)
Q Consensus 385 ~~~~--~~~~--~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~e-----vl~~L~~i 433 (435)
.... .... ............+.+++..||+.||++|||+.| ..+.++++
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i 307 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence 0000 0000 011112234456778999999999999999987 34555554
No 239
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-32 Score=261.95 Aligned_cols=235 Identities=20% Similarity=0.254 Sum_probs=172.6
Q ss_pred ccCcceeeeecccCcceEEEEEc--CCCCEEEEEEccccccccHHHHHHHHHHhccCCCCC------ceeEEEEEEeCCe
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL--PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQN------LVLLLGYCSFDEE 253 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 253 (435)
..+|++.+.||+|+||.||+|.. .+++.||||.++... ...+.+.+|+++++.++|+| |+++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35899999999999999999985 357899999986532 33467888999998887654 9999999999999
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------------
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------------- 301 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------------- 301 (435)
.++||||+ +|+|.+++.... ...+++.....++.|+++||+|||+
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 99999999 899999987643 2357889999999999999999995
Q ss_pred -----------cccccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCC
Q 040641 302 -----------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGA 370 (435)
Q Consensus 302 -----------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~ 370 (435)
|||+++.... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---- 240 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK---- 240 (339)
T ss_dssp EEESCCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH----
T ss_pred ccccCCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH----
Confidence 4555543221 123457899999999999889999999999999999999999998643211
Q ss_pred cHHHHHHHHhccCC--------CCccc---------------------cc-cccCCCCHHHHHHHHHHHhcccCCCCCCC
Q 040641 371 NLVGWVFQKMKKQQ--------ADDVL---------------------DP-TVLNAGSKPMMLKMLRIAADCVADNPATR 420 (435)
Q Consensus 371 ~~~~~~~~~~~~~~--------~~~~~---------------------~~-~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 420 (435)
.....+........ ..... .+ .............+.+++.+||+.||++|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 11111111110000 00000 00 00001122344567899999999999999
Q ss_pred CCHHHHHH
Q 040641 421 PTMLHVLK 428 (435)
Q Consensus 421 Ps~~evl~ 428 (435)
||+.|+++
T Consensus 321 pt~~ell~ 328 (339)
T 1z57_A 321 ITLREALK 328 (339)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999974
No 240
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.7e-32 Score=254.60 Aligned_cols=224 Identities=14% Similarity=0.132 Sum_probs=164.4
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc---ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT---QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
.+|++.+.||+|+||.||+|+.. +++.||||.+..... ...+.|.+|+.++++++|||||++++++..++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999875 489999999975432 23467999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------cccccccccccCccccccccccCCCcCCcCC
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------DFGLARLISACETHVSTDIAGTLGYIPPEYG 332 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~ 332 (435)
||+++|+|.++++.. ........++.|+++||+|||+ |.-...++-..+.. ...++++|++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~---~kl~~~~~~~~--- 178 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGD---VVLAYPATMPD--- 178 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSC---EEECSCCCCTT---
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCC---EEEEeccccCC---
Confidence 999999999998532 2445678899999999999996 44433333221111 13457788875
Q ss_pred CCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcc
Q 040641 333 QSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADC 412 (435)
Q Consensus 333 ~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 412 (435)
++.++|||||||++|||+||+.||............ ..........+....+. ....+.+++.+|
T Consensus 179 ----~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~l~~li~~~ 243 (286)
T 3uqc_A 179 ----ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------ERDTAGQPIEPADIDRD---IPFQISAVAARS 243 (286)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------CBCTTSCBCCHHHHCTT---SCHHHHHHHHHH
T ss_pred ----CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------HHHhccCCCChhhcccC---CCHHHHHHHHHH
Confidence 688999999999999999999998654321100000 00000000000001111 123467888999
Q ss_pred cCCCCCCCCCHHHHHHHHhhhh
Q 040641 413 VADNPATRPTMLHVLKLLHEIV 434 (435)
Q Consensus 413 ~~~~P~~RPs~~evl~~L~~i~ 434 (435)
|+.||++| |+.|+++.|+++.
T Consensus 244 l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 244 VQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp HCTTSSCC-CHHHHHHHHHHHH
T ss_pred cccCCccC-CHHHHHHHHHHHh
Confidence 99999999 9999999998864
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.98 E-value=7.1e-33 Score=267.16 Aligned_cols=239 Identities=18% Similarity=0.180 Sum_probs=173.1
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCC-----------CCCceeEEEEEE
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-----------HQNLVLLLGYCS 249 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~ 249 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+.... .....+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999986 468899999986432 23467889999998886 899999999987
Q ss_pred eCC----eeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------
Q 040641 250 FDE----EKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------ 301 (435)
Q Consensus 250 ~~~----~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------ 301 (435)
..+ ..++||||+ +|+|.+++.... ...+++.....++.|++.||+|||+
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcC
Confidence 654 689999999 999999987643 2348889999999999999999985
Q ss_pred -------cccccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccC--CcH
Q 040641 302 -------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEG--ANL 372 (435)
Q Consensus 302 -------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~--~~~ 372 (435)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||......... ...
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 67777654321 23457999999999998888999999999999999999999998643221110 011
Q ss_pred HHHHHHHhccCC-------------------CCcccccc---------ccCCCCHHHHHHHHHHHhcccCCCCCCCCCHH
Q 040641 373 VGWVFQKMKKQQ-------------------ADDVLDPT---------VLNAGSKPMMLKMLRIAADCVADNPATRPTML 424 (435)
Q Consensus 373 ~~~~~~~~~~~~-------------------~~~~~~~~---------~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~ 424 (435)
...+........ ........ ............+.+++.+||+.||++|||+.
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 111111111000 00000000 00112345566788999999999999999999
Q ss_pred HHHH
Q 040641 425 HVLK 428 (435)
Q Consensus 425 evl~ 428 (435)
|+++
T Consensus 330 ell~ 333 (373)
T 1q8y_A 330 GLVN 333 (373)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9985
No 242
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.98 E-value=7.8e-33 Score=264.97 Aligned_cols=230 Identities=20% Similarity=0.194 Sum_probs=165.8
Q ss_pred cCcceeeeecccCcceEEEEEcC-CCCEEEEEEcccccc--ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe------
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT--QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE------ 253 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------ 253 (435)
.+|.+.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57899999999999999999864 689999999865322 234678999999999999999999999987654
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccc
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLI 309 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~ 309 (435)
.++||||++ |+|.+++.. .+++.....++.|+++||+|||+ |||+++..
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 499999997 687766532 38889999999999999999996 89988764
Q ss_pred cccCccccccccccCCCcCCcCCCC-CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCC----
Q 040641 310 SACETHVSTDIAGTLGYIPPEYGQS-RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQ---- 384 (435)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 384 (435)
... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||..... ......+........
T Consensus 177 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 177 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY----LDQLTQILKVTGVPGTEFV 248 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH----HHHHHHHHHHHCBCCHHHH
T ss_pred CCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHHH
Confidence 321 234578999999998766 6789999999999999999999999854321 111111111110000
Q ss_pred --------------CCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 385 --------------ADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 385 --------------~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
......+.. ..........+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000 0000112235678889999999999999999974
No 243
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=1.2e-32 Score=267.69 Aligned_cols=239 Identities=20% Similarity=0.177 Sum_probs=169.4
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHhccCC--------CCCceeEEEEEE---
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK--------HQNLVLLLGYCS--- 249 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~g~~~--- 249 (435)
..+|++.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 35799999999999999999985 458899999996432 33467889999999886 788999999987
Q ss_pred -eCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeecc--------------------------
Q 040641 250 -FDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQD-------------------------- 302 (435)
Q Consensus 250 -~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~D-------------------------- 302 (435)
.....++||||+ +|+|.+++.... ...+++.....++.|+++||+|||+.
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 456789999999 566666555432 23588999999999999999999952
Q ss_pred ------------------------------------------------ccccccccccCccccccccccCCCcCCcCCCC
Q 040641 303 ------------------------------------------------FGLARLISACETHVSTDIAGTLGYIPPEYGQS 334 (435)
Q Consensus 303 ------------------------------------------------fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 334 (435)
||+++.... ......||+.|+|||++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~----~~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK----HFTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB----CSCSCCSCGGGCCHHHHHT
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc----cCccCCCCCcccCChhhcC
Confidence 222222111 1223568999999999988
Q ss_pred CCCCCcccchhHHHHHHHHHhCCCCCCCCcccccC--CcHHHHHHHHhccCCC---------Ccccccc-----c-----
Q 040641 335 RMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEG--ANLVGWVFQKMKKQQA---------DDVLDPT-----V----- 393 (435)
Q Consensus 335 ~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~-----~----- 393 (435)
..++.++|||||||++|||+||+.||......... ......+......... ....... .
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP 347 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence 88999999999999999999999998654322111 0111111111111000 0000000 0
Q ss_pred ---------cCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 394 ---------LNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 394 ---------~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
...........+.+++.+||+.||++|||+.|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00123455667889999999999999999999985
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.98 E-value=6.2e-33 Score=260.99 Aligned_cols=216 Identities=24% Similarity=0.367 Sum_probs=162.9
Q ss_pred ccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccc------cHHHHHHHHHHhccC----CCCCceeEEEEEEe
Q 040641 182 LLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQ------GHRQFTAEMETLGKV----KHQNLVLLLGYCSF 250 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~H~niv~l~g~~~~ 250 (435)
..+|++.+.||+|+||.||+|+. .+++.||||.+...... ....+.+|+.++.++ +||||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 45799999999999999999986 46889999999654321 223456789988888 89999999999999
Q ss_pred CCeeEEEEec-ccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------ccc
Q 040641 251 DEEKLLVYEY-MVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFG 304 (435)
Q Consensus 251 ~~~~~lv~ey-~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfG 304 (435)
.+..++|||| +++++|.+++.... .+++..+..++.++++||+|||+ |||
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred CCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 9999999999 89999999997642 48899999999999999999996 889
Q ss_pred ccccccccCccccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccC
Q 040641 305 LARLISACETHVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQ 383 (435)
Q Consensus 305 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 383 (435)
+++..... ......||..|+|||+..+..+ +.++|||||||++|||++|+.||.... . .... ..
T Consensus 186 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------~-~~~~--~~ 250 (312)
T 2iwi_A 186 SGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------E-ILEA--EL 250 (312)
T ss_dssp SCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------H-HHHT--CC
T ss_pred hhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---------H-Hhhh--cc
Confidence 88766432 2234679999999998766555 458999999999999999999985310 0 0100 00
Q ss_pred CCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 384 QADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
. . + .. ....+.+++.+||+.||++|||+.|+++
T Consensus 251 ~----~-~---~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 251 H----F-P---AH----VSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp C----C-C---TT----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred C----C-c---cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0 0 01 1124677889999999999999999986
No 245
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.98 E-value=5.5e-33 Score=262.31 Aligned_cols=217 Identities=22% Similarity=0.338 Sum_probs=170.5
Q ss_pred cccCcceeeeecccCcceEEEEEc-CCCCEEEEEEccccccc------cHHHHHHHHHHhccCC--CCCceeEEEEEEeC
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQ------GHRQFTAEMETLGKVK--HQNLVLLLGYCSFD 251 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~ 251 (435)
...+|++.+.||+|+||.||+|+. .+++.||||.+...... ..+.+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 346799999999999999999985 46889999998654321 2245778999999996 59999999999999
Q ss_pred CeeEEEEecccC-CCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-------------------------cccc
Q 040641 252 EEKLLVYEYMVN-GSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------DFGL 305 (435)
Q Consensus 252 ~~~~lv~ey~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------DfGl 305 (435)
+..++||||+.+ ++|.+++.... .+++.....++.|+++||+|||+ |||+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999999986 89999997642 47889999999999999999996 8998
Q ss_pred cccccccCccccccccccCCCcCCcCCCCCCC-CCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCC
Q 040641 306 ARLISACETHVSTDIAGTLGYIPPEYGQSRMS-TTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQ 384 (435)
Q Consensus 306 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (435)
++..... ......||+.|+|||++.+..+ +.++|||||||++|||+||+.||.... . . .....
T Consensus 197 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---------~-~---~~~~~ 260 (320)
T 3a99_A 197 GALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------E-I---IRGQV 260 (320)
T ss_dssp CEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------H-H---HHCCC
T ss_pred ccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---------h-h---hcccc
Confidence 8766432 2234679999999998766555 678999999999999999999985321 0 0 01000
Q ss_pred CCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 040641 385 ADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl~ 428 (435)
...+ . ....+.+++.+||+.||++|||+.||++
T Consensus 261 ---~~~~----~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 ---FFRQ----R----VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---CCSS----C----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---cccc----c----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 1 1125678889999999999999999985
No 246
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=6.6e-32 Score=258.42 Aligned_cols=235 Identities=20% Similarity=0.256 Sum_probs=170.7
Q ss_pred ccCcceeeeecccCcceEEEEEcC-CC-CEEEEEEccccccccHHHHHHHHHHhccCCCCC------ceeEEEEEEeCCe
Q 040641 182 LLKLTLVDILEDGGFGTVYKATLP-DG-KTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQN------LVLLLGYCSFDEE 253 (435)
Q Consensus 182 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 253 (435)
..+|++.+.||+|+||.||+|... ++ +.||||.++... ...+.+.+|+.++++++|+| ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 358999999999999999999864 34 689999996432 33467888999999988766 9999999999999
Q ss_pred eEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec--------------------------------
Q 040641 254 KLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-------------------------------- 301 (435)
Q Consensus 254 ~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-------------------------------- 301 (435)
.++||||+ +|+|.+++.... ...+++.....++.|+++||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccc
Confidence 99999999 667766665532 2358899999999999999999995
Q ss_pred -----------cccccccccccCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCC
Q 040641 302 -----------DFGLARLISACETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGA 370 (435)
Q Consensus 302 -----------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~ 370 (435)
|||+++.... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---- 245 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR---- 245 (355)
T ss_dssp EEESCCCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----
T ss_pred cccCCCcEEEeecCccccccc----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 5666554321 123457999999999998889999999999999999999999998643211
Q ss_pred cHHHHHHHHhccCCC--------Ccc-cc--------------------c-cccCCCCHHHHHHHHHHHhcccCCCCCCC
Q 040641 371 NLVGWVFQKMKKQQA--------DDV-LD--------------------P-TVLNAGSKPMMLKMLRIAADCVADNPATR 420 (435)
Q Consensus 371 ~~~~~~~~~~~~~~~--------~~~-~~--------------------~-~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 420 (435)
.....+......... ... .. + .............+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 111111111110000 000 00 0 00001112234467889999999999999
Q ss_pred CCHHHHHH
Q 040641 421 PTMLHVLK 428 (435)
Q Consensus 421 Ps~~evl~ 428 (435)
||+.|+++
T Consensus 326 pt~~e~l~ 333 (355)
T 2eu9_A 326 ITLAEALL 333 (355)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999974
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.2e-32 Score=285.60 Aligned_cols=215 Identities=20% Similarity=0.284 Sum_probs=166.8
Q ss_pred cCcceeeeecccCcceEEEEEcC--CCCEEEEEEccccc-cccHHHHHHHHHHhccCCCCCceeEEEEEEeCCe-----e
Q 040641 183 LKLTLVDILEDGGFGTVYKATLP--DGKTVAVKKFSQAK-TQGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEE-----K 254 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----~ 254 (435)
.+|++.+.||+|+||.||+|++. +++.||||.+.... ......|.+|++++++++|||||++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57999999999999999999865 58899999986533 2344678999999999999999999999987665 6
Q ss_pred EEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec-----------------------cccccccccc
Q 040641 255 LLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ-----------------------DFGLARLISA 311 (435)
Q Consensus 255 ~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-----------------------DfGla~~~~~ 311 (435)
|+||||+++++|.+++.. .+++..++.++.|+++||+|||+ |||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhccc
Confidence 999999999999887643 48999999999999999999996 8999887543
Q ss_pred cCccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccc
Q 040641 312 CETHVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDP 391 (435)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (435)
. ....||++|+|||++.+. ++.++|||||||++|||++|..|+........ . .
T Consensus 234 ~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----------------~---~- 286 (681)
T 2pzi_A 234 F-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL-----------------P---E- 286 (681)
T ss_dssp C-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC-----------------C---T-
T ss_pred C-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc-----------------c---c-
Confidence 2 346799999999987654 48899999999999999999888643221100 0 0
Q ss_pred cccCCCCHHHHHHHHHHHhcccCCCCCCCCC-HHHHHHHHhhh
Q 040641 392 TVLNAGSKPMMLKMLRIAADCVADNPATRPT-MLHVLKLLHEI 433 (435)
Q Consensus 392 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs-~~evl~~L~~i 433 (435)
..........+.+++.+||+.||++||+ +.++...|..+
T Consensus 287 ---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 287 ---DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ---TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ---cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0000112235678899999999999995 55566666543
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=3.9e-30 Score=240.40 Aligned_cols=227 Identities=15% Similarity=0.132 Sum_probs=152.5
Q ss_pred cCccee-eeecccCcceEEEEEc-CCCCEEEEEEccccccccHHHHHHHHHHh-ccCCCCCceeEEEEEEe----CCeeE
Q 040641 183 LKLTLV-DILEDGGFGTVYKATL-PDGKTVAVKKFSQAKTQGHRQFTAEMETL-GKVKHQNLVLLLGYCSF----DEEKL 255 (435)
Q Consensus 183 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~ 255 (435)
.+|.+. ++||+|+||.||+|.. .+++.||||.+.. ...+.+|+.++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 7899999999999986 4688999999853 24577899887 66799999999999876 67789
Q ss_pred EEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------cccccccccccCccccccccccCCCcCC
Q 040641 256 LVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------DFGLARLISACETHVSTDIAGTLGYIPP 329 (435)
Q Consensus 256 lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------DfGla~~~~~~~~~~~~~~~gt~~y~aP 329 (435)
+||||+++|+|.+++.... ...+++.....++.+++.||+|||+ |.-...++-........-..+ .|-..
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~--Dfg~a 167 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT--DFGFA 167 (299)
T ss_dssp EEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEEC--CCTTC
T ss_pred EEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEe--ccccc
Confidence 9999999999999998643 2358899999999999999999986 443333322110000000001 11112
Q ss_pred cCCCCCCCCCcccchhHHHHHHHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHH
Q 040641 330 EYGQSRMSTTRGDVYSFGVILLELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIA 409 (435)
Q Consensus 330 E~~~~~~~~~k~DV~SfGvil~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 409 (435)
+...+..++.++|||||||++|||+||+.||........ ........... ......+........+.+++
T Consensus 168 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li 237 (299)
T 3m2w_A 168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--------SPGMKTRIRMG--QYEFPNPEWSEVSEEVKMLI 237 (299)
T ss_dssp EECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------CCSCCSSCTT--CCSSCHHHHTTSCHHHHHHH
T ss_pred cccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh--------hHHHHHHHhhc--cccCCchhcccCCHHHHHHH
Confidence 233456688999999999999999999999854321100 00000000000 00000000001123567888
Q ss_pred hcccCCCCCCCCCHHHHHH
Q 040641 410 ADCVADNPATRPTMLHVLK 428 (435)
Q Consensus 410 ~~C~~~~P~~RPs~~evl~ 428 (435)
.+||+.||++|||+.|+++
T Consensus 238 ~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 238 RNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHTCSSTTTSCCHHHHHT
T ss_pred HHHcccChhhCCCHHHHhc
Confidence 9999999999999999985
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=1.3e-30 Score=254.42 Aligned_cols=221 Identities=16% Similarity=0.155 Sum_probs=156.3
Q ss_pred cccccCcceeeeecccCcceEEEEEc-CCCCEEEEEEcccccc---ccHHHHHHHHHHhccCCC-CCcee----------
Q 040641 179 QQPLLKLTLVDILEDGGFGTVYKATL-PDGKTVAVKKFSQAKT---QGHRQFTAEMETLGKVKH-QNLVL---------- 243 (435)
Q Consensus 179 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H-~niv~---------- 243 (435)
..+...|...+.||+|+||.||+|++ .+|+.||||++..... ...+.|.+|+.+++.++| +|...
T Consensus 74 ~~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~ 153 (413)
T 3dzo_A 74 GERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 153 (413)
T ss_dssp SSCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCC
T ss_pred CCCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccc
Confidence 34456688899999999999999994 5689999999873322 235789999999999987 32211
Q ss_pred -----------EEEEEEe-----CCeeEEEEecccCCCHHHHHHhh---CCCCCCCCHHHHHHHHHHhhhccceeec---
Q 040641 244 -----------LLGYCSF-----DEEKLLVYEYMVNGSLDLWLRNA---TGSHEVLDRAKRYKIACSSARGLAFLHQ--- 301 (435)
Q Consensus 244 -----------l~g~~~~-----~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~l~~~~~~~i~~~ia~gl~yLH~--- 301 (435)
+..++.. ....+++|+++ +|+|.+++... ......+++..++.++.|+++||+|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 232 (413)
T 3dzo_A 154 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL 232 (413)
T ss_dssp CEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred hhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1111111 12356777765 68999887521 2223457888999999999999999996
Q ss_pred ---------------------cccccccccccCccccccccccCCCcCCcCC----------CCCCCCCcccchhHHHHH
Q 040641 302 ---------------------DFGLARLISACETHVSTDIAGTLGYIPPEYG----------QSRMSTTRGDVYSFGVIL 350 (435)
Q Consensus 302 ---------------------DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~k~DV~SfGvil 350 (435)
|||+++..... ....+| +.|+|||++ ....++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99998765432 344678 999999988 666788999999999999
Q ss_pred HHHHhCCCCCCCCcccccCCcHHHHHHHHhccCCCCccccccccCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHH
Q 040641 351 LELVTAKEPTGPEFQEKEGANLVGWVFQKMKKQQADDVLDPTVLNAGSKPMMLKMLRIAADCVADNPATRPTMLHVL 427 (435)
Q Consensus 351 ~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPs~~evl 427 (435)
|||+||+.||......... ....... .. ....+.+++.+||+.||++|||+.+++
T Consensus 308 ~elltg~~Pf~~~~~~~~~----------------~~~~~~~--~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGS----------------EWIFRSC--KN----IPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCS----------------GGGGSSC--CC----CCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhhH----------------HHHHhhc--cc----CCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999999998643221110 0000000 00 113577888999999999999987775
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=2.6e-28 Score=231.86 Aligned_cols=218 Identities=16% Similarity=0.134 Sum_probs=157.0
Q ss_pred cccCcceeeeecccCcceEEEEEcCCCCEEEEEEccccc--------cccHHHHHHHHHHhccCC---------CCCcee
Q 040641 181 PLLKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAK--------TQGHRQFTAEMETLGKVK---------HQNLVL 243 (435)
Q Consensus 181 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~ 243 (435)
...+|++.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|+.++++++ |||||+
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 346789999999999999999998 68999999997542 223477889999988885 888888
Q ss_pred EEEEEE------------------------------eCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhh
Q 040641 244 LLGYCS------------------------------FDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSA 293 (435)
Q Consensus 244 l~g~~~------------------------------~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia 293 (435)
+.+++. ..+..++|||||++|++.+.+.. ..+++.....++.|++
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence 888653 26789999999999976554432 2478899999999999
Q ss_pred hccceee-c--------------------------------------------cccccccccccCccccccccccCCCcC
Q 040641 294 RGLAFLH-Q--------------------------------------------DFGLARLISACETHVSTDIAGTLGYIP 328 (435)
Q Consensus 294 ~gl~yLH-~--------------------------------------------DfGla~~~~~~~~~~~~~~~gt~~y~a 328 (435)
.||+||| + |||+|+.... ...+||+.|||
T Consensus 172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~a 245 (336)
T 2vuw_A 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTC
T ss_pred HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecccC
Confidence 9999999 3 6777765432 23479999999
Q ss_pred CcCCCCCCCCCcccchhHHHH-HHHHHhCCCCCCCCcccccCCcHHHHHHHHhc-cCCCCccccccccCCCCHHHHHHHH
Q 040641 329 PEYGQSRMSTTRGDVYSFGVI-LLELVTAKEPTGPEFQEKEGANLVGWVFQKMK-KQQADDVLDPTVLNAGSKPMMLKML 406 (435)
Q Consensus 329 PE~~~~~~~~~k~DV~SfGvi-l~El~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (435)
||++.+.. +.++||||++++ .+++++|..||... .........+. ...... .............+.
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-------LWLHYLTDKMLKQMTFKT----KCNTPAMKQIKRKIQ 313 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-------HHHHHHHHHHHHTCCCSS----CCCSHHHHHHHHHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-------hhhhHHHHhhhhhhccCc----ccchhhhhhcCHHHH
Confidence 99988766 889999998776 78888898886210 00000111111 111100 000111234556788
Q ss_pred HHHhcccCCCCCCCCCHHHHH
Q 040641 407 RIAADCVADNPATRPTMLHVL 427 (435)
Q Consensus 407 ~l~~~C~~~~P~~RPs~~evl 427 (435)
+++.+||+.| |+.|++
T Consensus 314 dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHhccC-----CHHHHH
Confidence 8999999976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.84 E-value=9.6e-23 Score=205.88 Aligned_cols=161 Identities=19% Similarity=0.067 Sum_probs=105.9
Q ss_pred eecccCcceEEEEE-cCCCCEEEEEEccccc----------cccHHHHHHHHHHhccC-CCCCceeEEEEEEeCCeeEEE
Q 040641 190 ILEDGGFGTVYKAT-LPDGKTVAVKKFSQAK----------TQGHRQFTAEMETLGKV-KHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 190 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 257 (435)
..+.|++|.++.++ ...|+.+|||.+.... ....++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35677777766654 3358899999986431 12346799999999999 799999999999999999999
Q ss_pred EecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec------------------------cccccccccccC
Q 040641 258 YEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ------------------------DFGLARLISACE 313 (435)
Q Consensus 258 ~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------DfGla~~~~~~~ 313 (435)
|||++||+|.++|.... .++.. +|+.||+.||+|+|+ |||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~----~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE----EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC----CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC----CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999997642 34543 488999999999996 999998765432
Q ss_pred ccccccccccCCCcCCcCCCCCCCCCcccchhHHHHHHHHHhCCCC
Q 040641 314 THVSTDIAGTLGYIPPEYGQSRMSTTRGDVYSFGVILLELVTAKEP 359 (435)
Q Consensus 314 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~SfGvil~El~tg~~p 359 (435)
...+..+||++|||||++.+. +..++|+||+|++++++.++..+
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 233457899999999998764 56789999999998877665433
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.81 E-value=1.8e-21 Score=195.56 Aligned_cols=161 Identities=14% Similarity=0.088 Sum_probs=123.7
Q ss_pred eeeeecccCcceEEEEEcCCCCEEEEEEcccccc--------ccHHHHHHHHHHhccCCCCCceeEEEEEEeCCeeEEEE
Q 040641 187 LVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKT--------QGHRQFTAEMETLGKVKHQNLVLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 187 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 258 (435)
..++||+|+||.||+|.. .++.+|+|+...... ...+.|.+|++++++++|||||++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 356899999999999965 468899998643221 11345899999999999999997777777888889999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----------------------cccccccccccCcc-
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----------------------DFGLARLISACETH- 315 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----------------------DfGla~~~~~~~~~- 315 (435)
||+++|+|.+++.. +..++.|+++||+|||+ |||+++........
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~ 486 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKA 486 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHH
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccc
Confidence 99999999999864 34789999999999995 99999886543221
Q ss_pred -----ccccccccCCCcCCcCCCC--CCCCCcccchhHHHHHHHHHhCCCCC
Q 040641 316 -----VSTDIAGTLGYIPPEYGQS--RMSTTRGDVYSFGVILLELVTAKEPT 360 (435)
Q Consensus 316 -----~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~SfGvil~El~tg~~p~ 360 (435)
.....+||+.|||||++.. ..|+.++|+||..+-..|.+.++.+|
T Consensus 487 ~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 487 VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 1235689999999998876 56788899999999999998888775
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.81 E-value=5.3e-20 Score=193.44 Aligned_cols=128 Identities=36% Similarity=0.625 Sum_probs=80.5
Q ss_pred cccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCc------------------------
Q 040641 2 TGSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSL------------------------ 57 (435)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~------------------------ 57 (435)
+|.+|.+++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|.++|.+|..+
T Consensus 503 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (768)
T 3rgz_A 503 TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 582 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCS
T ss_pred CCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccc
Confidence 45666666666666666666666666666666666666666666666665555432
Q ss_pred ----------------------------------------------cCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEe
Q 040641 58 ----------------------------------------------GNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLD 91 (435)
Q Consensus 58 ----------------------------------------------~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 91 (435)
+.+++|+.|||++|.++|.+|..+++++.|+.|+
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 662 (768)
T 3rgz_A 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILN 662 (768)
T ss_dssp CCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEE
T ss_pred ccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEe
Confidence 2234556666666666666666666666666666
Q ss_pred CCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 92 LHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 92 l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+++|+++|.+|..++++++|+.||+++|+++|.+|..+
T Consensus 663 Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l 700 (768)
T 3rgz_A 663 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 700 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGG
T ss_pred CcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHH
Confidence 66666666666666666666666666666666666544
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.81 E-value=4.2e-20 Score=194.23 Aligned_cols=129 Identities=36% Similarity=0.651 Sum_probs=85.7
Q ss_pred cccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcC
Q 040641 2 TGSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSL 81 (435)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~ 81 (435)
+|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.||+++|.++|.+|..+
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 45666666666777777777777766666666667777777777777766666666666677777777666666555432
Q ss_pred ----------------------------------------------------------------------CCCCCCCEEe
Q 040641 82 ----------------------------------------------------------------------GNLSYSTYLD 91 (435)
Q Consensus 82 ----------------------------------------------------------------------~~l~~L~~L~ 91 (435)
+.+++|++|+
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 2234566667
Q ss_pred CCCCCCcccCCccccCcCCCCcccccCCcceecCCcccc
Q 040641 92 LHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKIC 130 (435)
Q Consensus 92 l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~~ 130 (435)
+++|+++|.+|..+++++.|+.|++++|.++|.+|..+.
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~ 677 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 677 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHh
Confidence 777777666776666677777777777777766666543
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.79 E-value=1.8e-19 Score=168.97 Aligned_cols=131 Identities=32% Similarity=0.547 Sum_probs=122.7
Q ss_pred Ccc--cCCccccCCCCCCeeecCC-CcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcC
Q 040641 1 LTG--SIPSEFGDSLKLQGLYLGN-NQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGW 77 (435)
Q Consensus 1 l~g--~lp~~~~~l~~L~~L~l~~-n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 77 (435)
++| .+|..++++++|++|+|++ |.+.+.+|..++++++|++|+|++|.+++.+|..+..+++|++|+|++|.+++.+
T Consensus 62 l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (313)
T 1ogq_A 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTL 141 (313)
T ss_dssp CSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCC
T ss_pred ccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcC
Confidence 456 7999999999999999995 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCEEeCCCCCCcccCCccccCcC-CCCcccccCCcceecCCccccc
Q 040641 78 PRSLGNLSYSTYLDLHDNKFTREIPQNLGNLA-QLEHLDVLRNMLCGKIPEKICK 131 (435)
Q Consensus 78 p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~-~L~~l~l~~n~l~g~~p~~~~~ 131 (435)
|..++.+++|++|++++|.+++.+|..+++++ +|+.|++++|.+++.+|..+..
T Consensus 142 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~ 196 (313)
T 1ogq_A 142 PPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196 (313)
T ss_dssp CGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG
T ss_pred ChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC
Confidence 99999999999999999999999999999998 9999999999999999987654
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.78 E-value=2.7e-19 Score=167.78 Aligned_cols=119 Identities=25% Similarity=0.401 Sum_probs=103.9
Q ss_pred CCCCeeecCCCcccc--cCCcccCCCCCCcEEECCC-CcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCE
Q 040641 13 LKLQGLYLGNNQLTG--SIPRSLGQLGGLVKLNLTR-NKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTY 89 (435)
Q Consensus 13 ~~L~~L~l~~n~l~g--~~p~~~~~l~~L~~L~ls~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 89 (435)
.+++.|+|++|.++| .+|..++++++|++|+|++ |.+.+.+|..++.+++|++|+|++|.+++.+|..++++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578889999999988 8888899999999999984 8888888888889999999999999998888888888999999
Q ss_pred EeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccccc
Q 040641 90 LDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKICK 131 (435)
Q Consensus 90 L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~~~ 131 (435)
|++++|.+++.+|..++++++|++|++++|.++|.+|..+..
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 171 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGC
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhh
Confidence 999999988888888888999999999999988888876643
No 257
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.75 E-value=3.6e-20 Score=184.33 Aligned_cols=30 Identities=13% Similarity=0.062 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHhccCCCCCceeEEEEEEeC
Q 040641 222 GHRQFTAEMETLGKVKHQNLVLLLGYCSFD 251 (435)
Q Consensus 222 ~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 251 (435)
..++|.+|++.+++++|+|+|+++|||...
T Consensus 322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~ 351 (487)
T 3oja_A 322 GSETERLECERENQARQREIDALKEQYRTV 351 (487)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence 356899999999999999999999999654
No 258
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=6.8e-18 Score=146.51 Aligned_cols=122 Identities=25% Similarity=0.324 Sum_probs=109.5
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCc-ccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcC
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSIPR-SLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSL 81 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~ 81 (435)
+.||..+.. +|+.|+|++|++++..+. .++.+++|++|+|++|++++..|..|..+++|+.|+|++|.+++..|..|
T Consensus 21 ~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 98 (192)
T 1w8a_A 21 KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMF 98 (192)
T ss_dssp SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSS
T ss_pred CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHh
Confidence 357776654 899999999999865554 48999999999999999998888999999999999999999998888889
Q ss_pred CCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 82 GNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 82 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
.++++|++|++++|++++.+|..+..+++|+.|++++|.+.+..+
T Consensus 99 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 99 LGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp TTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999999999999999999999999999999999999987655
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.74 E-value=5.2e-18 Score=160.08 Aligned_cols=124 Identities=22% Similarity=0.291 Sum_probs=70.4
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCC---------CCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQ---------LGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFD 74 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~---------l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~ 74 (435)
.||..++++++|+.|+|++|++.+.+|..++. +++|+.|+|++|.++ .+|..++.+++|+.|+|++|.++
T Consensus 141 ~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 141 ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 35555666666666666665555555555443 555555555555555 45555555555555555555555
Q ss_pred CcCCCcCCCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 75 GGWPRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 75 ~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+ +|..++.+++|++|++++|++.+.+|..++++++|+.|++++|.+.+.+|..+
T Consensus 220 ~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~ 273 (328)
T 4fcg_A 220 A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDI 273 (328)
T ss_dssp C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTG
T ss_pred c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhh
Confidence 3 44455555555555555555555555555555555555555555555555443
No 260
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=148.37 Aligned_cols=124 Identities=21% Similarity=0.233 Sum_probs=84.4
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCc-ccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPR-SLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 82 (435)
.||..+.. .++.|+|++|++++..|. .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+++..|..|.
T Consensus 25 ~iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 102 (220)
T 2v70_A 25 KIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFK 102 (220)
T ss_dssp SCCSCCCT--TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGT
T ss_pred cCccCCCC--CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhc
Confidence 35655533 346777777777755443 366777777777777777765555677777777777777777766666677
Q ss_pred CCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 83 NLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
.+++|++|++++|++++..|..+..+++|+.|++++|.+++..|..+
T Consensus 103 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 149 (220)
T 2v70_A 103 GLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149 (220)
T ss_dssp TCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT
T ss_pred CCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh
Confidence 77777777777777776667777777777777777777776555444
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.73 E-value=4e-17 Score=147.98 Aligned_cols=115 Identities=23% Similarity=0.216 Sum_probs=53.6
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.|+.+++|+.|+|++|++++..|..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|.+++..+..+..+++|
T Consensus 54 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 133 (251)
T 3m19_A 54 TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKL 133 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcc
Confidence 34444444445554444444444444444445555555554443333334444445555555554443333334444445
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCcce
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
++|++++|++++..+..++++++|+.|++++|.++
T Consensus 134 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 134 KELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 55555555444333334444444555555555444
No 262
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.72 E-value=2.4e-18 Score=176.91 Aligned_cols=98 Identities=16% Similarity=0.231 Sum_probs=55.5
Q ss_pred CCcccCCCCCCcEEECCCCcCccC-----------------CCcCcc--CCCCCCeEECcCcccCCcCCCcCCCCCCCCE
Q 040641 29 IPRSLGQLGGLVKLNLTRNKFSGP-----------------VPTSLG--NLKGLSHLDLSSNFFDGGWPRSLGNLSYSTY 89 (435)
Q Consensus 29 ~p~~~~~l~~L~~L~ls~n~l~~~-----------------~p~~~~--~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 89 (435)
+|.+++++++|++|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|..++++++|++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 555555556666666666665553 555555 5555666666666555555555555555556
Q ss_pred EeCCCCC-Ccc-cCCccccCc------CCCCcccccCCcceecCCc
Q 040641 90 LDLHDNK-FTR-EIPQNLGNL------AQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 90 L~l~~n~-~~~-~~p~~~~~l------~~L~~l~l~~n~l~g~~p~ 127 (435)
|++++|+ ++| .+|..++++ ++|+.|++++|.++ .+|.
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 6655555 555 555555444 55555555555555 4444
No 263
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.72 E-value=2.9e-18 Score=176.25 Aligned_cols=126 Identities=21% Similarity=0.314 Sum_probs=118.6
Q ss_pred CcccCCccccCCCCCCeeecCCCccccc-----------------CCcccC--CCCCCcEEECCCCcCccCCCcCccCCC
Q 040641 1 LTGSIPSEFGDSLKLQGLYLGNNQLTGS-----------------IPRSLG--QLGGLVKLNLTRNKFSGPVPTSLGNLK 61 (435)
Q Consensus 1 l~g~lp~~~~~l~~L~~L~l~~n~l~g~-----------------~p~~~~--~l~~L~~L~ls~n~l~~~~p~~~~~l~ 61 (435)
|+| ||.+++++++|++|+|++|.++|. +|.+++ ++++|++|+|++|.+.|.+|..+++++
T Consensus 195 l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 273 (636)
T 4eco_A 195 ITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALP 273 (636)
T ss_dssp EEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCS
T ss_pred Ccc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCC
Confidence 357 999999999999999999999986 999999 999999999999999999999999999
Q ss_pred CCCeEECcCcc-cCC-cCCCcCCCC------CCCCEEeCCCCCCcccCCc--cccCcCCCCcccccCCcceecCCccc
Q 040641 62 GLSHLDLSSNF-FDG-GWPRSLGNL------SYSTYLDLHDNKFTREIPQ--NLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 62 ~L~~L~l~~n~-l~~-~~p~~~~~l------~~L~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+|+.|+|++|. ++| .+|..++.+ ++|++|++++|+++ .+|. .++++++|+.|++++|.++|.+| .+
T Consensus 274 ~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 274 EMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 99999999998 998 899988887 99999999999998 8999 89999999999999999999999 44
No 264
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.72 E-value=7.6e-17 Score=143.04 Aligned_cols=122 Identities=20% Similarity=0.217 Sum_probs=104.7
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.||..+. ++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|.++...+..|..
T Consensus 25 ~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~ 102 (220)
T 2v9t_B 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEG 102 (220)
T ss_dssp SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTT
T ss_pred cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccC
Confidence 3666554 68999999999999766778999999999999999999877888999999999999999998655556788
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
+++|++|++++|++++..|..+..+++|+.|++++|.+++..+.
T Consensus 103 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 103 LFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 99999999999999988888899999999999999998865544
No 265
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.71 E-value=5.9e-17 Score=143.75 Aligned_cols=118 Identities=24% Similarity=0.265 Sum_probs=108.2
Q ss_pred CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..|..|..++
T Consensus 49 ~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 128 (220)
T 2v9t_B 49 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH 128 (220)
T ss_dssp TTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCC
Confidence 45789999999999999999988899999999999999999999954444578999999999999999998899999999
Q ss_pred CCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 86 YSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 86 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+|++|++++|++++..+..+..+++|+.|++++|.+..
T Consensus 129 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 129 NLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999999999998777789999999999999998864
No 266
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.71 E-value=1.1e-16 Score=143.05 Aligned_cols=122 Identities=28% Similarity=0.288 Sum_probs=107.3
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCC
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 82 (435)
+.+|..+. ++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..|.
T Consensus 32 ~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 109 (229)
T 3e6j_A 32 ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFD 109 (229)
T ss_dssp SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhC
Confidence 35776664 7899999999999988899999999999999999999854445679999999999999999977677789
Q ss_pred CCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 83 NLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
.+++|++|++++|+++ .+|..+..+++|+.|++++|.+++..+.
T Consensus 110 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 110 RLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp TCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred cchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 9999999999999998 7999999999999999999999854443
No 267
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.70 E-value=1.1e-16 Score=143.04 Aligned_cols=125 Identities=25% Similarity=0.290 Sum_probs=110.2
Q ss_pred CcccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCc
Q 040641 1 LTGSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRS 80 (435)
Q Consensus 1 l~g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 80 (435)
+++..|..|..+++|+.|+|++|+++...+..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|.++ .+|..
T Consensus 52 i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~ 130 (229)
T 3e6j_A 52 ITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG 130 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTT
T ss_pred cCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcc
Confidence 34556788999999999999999998555566799999999999999999765666899999999999999998 78999
Q ss_pred CCCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 81 LGNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 81 ~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+..+++|++|++++|++++..+..+..+++|+.|++++|.+.+..+
T Consensus 131 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 131 IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp GGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999999999999999987666778999999999999999876543
No 268
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.70 E-value=3e-17 Score=154.88 Aligned_cols=124 Identities=23% Similarity=0.322 Sum_probs=114.1
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccC---------CCCCCeEECcCcccC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGN---------LKGLSHLDLSSNFFD 74 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~---------l~~L~~L~l~~n~l~ 74 (435)
.+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+|..++. +++|+.|+|++|.++
T Consensus 118 ~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 196 (328)
T 4fcg_A 118 ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR 196 (328)
T ss_dssp CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC
T ss_pred chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC
Confidence 68999999999999999999999 89999999999999999999998999988765 999999999999998
Q ss_pred CcCCCcCCCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcccc
Q 040641 75 GGWPRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKIC 130 (435)
Q Consensus 75 ~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~~ 130 (435)
.+|..++.+++|++|++++|.+++ +|..++++++|+.|++++|.+.+.+|..+.
T Consensus 197 -~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~ 250 (328)
T 4fcg_A 197 -SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFG 250 (328)
T ss_dssp -CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTT
T ss_pred -cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhc
Confidence 799999999999999999999984 778899999999999999999999887654
No 269
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=141.41 Aligned_cols=119 Identities=24% Similarity=0.247 Sum_probs=107.7
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.|..+++|+.|+|++|++++..|..+.++++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..|..|..+++|
T Consensus 52 ~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (220)
T 2v70_A 52 IFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSV 131 (220)
T ss_dssp CGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTC
T ss_pred hhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccC
Confidence 47899999999999999997777789999999999999999997666679999999999999999998889999999999
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|++++|++++..|..+..+++|+.|++++|.+.+..+
T Consensus 132 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 132 RLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999999998889999999999999999999886544
No 270
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.70 E-value=2e-16 Score=139.06 Aligned_cols=120 Identities=23% Similarity=0.227 Sum_probs=86.0
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
+|..+ .++|+.|+|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..+..+
T Consensus 22 ~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 99 (208)
T 2o6s_A 22 VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKL 99 (208)
T ss_dssp CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCc
Confidence 45433 3477888888888875555567778888888888888875444456777888888888888876555567778
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|++|++++|++++..+..+.++++|+.|++++|.+++..+
T Consensus 100 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 100 TQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCH
Confidence 888888888888876555557777888888888887775433
No 271
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=7.8e-18 Score=176.96 Aligned_cols=98 Identities=20% Similarity=0.242 Sum_probs=69.3
Q ss_pred CCcccCCCCCCcEEECCCCcCcc-----------------CCCcCcc--CCCCCCeEECcCcccCCcCCCcCCCCCCCCE
Q 040641 29 IPRSLGQLGGLVKLNLTRNKFSG-----------------PVPTSLG--NLKGLSHLDLSSNFFDGGWPRSLGNLSYSTY 89 (435)
Q Consensus 29 ~p~~~~~l~~L~~L~ls~n~l~~-----------------~~p~~~~--~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 89 (435)
+|.+++++++|+.|+|++|.++| .+|..++ ++++|+.|+|++|.+.+.+|..|+++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 66667777777777777777776 3777766 7777777777777777777777777777777
Q ss_pred EeCCCCC-Ccc-cCCccccCcC-------CCCcccccCCcceecCCc
Q 040641 90 LDLHDNK-FTR-EIPQNLGNLA-------QLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 90 L~l~~n~-~~~-~~p~~~~~l~-------~L~~l~l~~n~l~g~~p~ 127 (435)
|++++|+ ++| .+|..+++++ +|+.|++++|.++ .+|.
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 7777776 766 6666655554 6777777777776 5665
No 272
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.69 E-value=1.8e-16 Score=145.45 Aligned_cols=122 Identities=24% Similarity=0.212 Sum_probs=99.3
Q ss_pred ccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCC
Q 040641 7 SEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSY 86 (435)
Q Consensus 7 ~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 86 (435)
+.++.+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..++.+++|+.|++++|.+++..|..++.+++
T Consensus 79 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 158 (272)
T 3rfs_A 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTN 158 (272)
T ss_dssp GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCcc
Confidence 36788888888999988888766667788888899999888888666666888888888888888888766666788888
Q ss_pred CCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcc
Q 040641 87 STYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 87 L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~ 128 (435)
|++|++++|++++..|..++.+++|+.|++++|.+++..|..
T Consensus 159 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 200 (272)
T 3rfs_A 159 LTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGV 200 (272)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHH
Confidence 888888888888766666788888888888888888765543
No 273
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.69 E-value=2.1e-16 Score=143.18 Aligned_cols=123 Identities=22% Similarity=0.213 Sum_probs=110.2
Q ss_pred cccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcC
Q 040641 2 TGSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSL 81 (435)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~ 81 (435)
++..|..|..+++|+.|+|++|++++..+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|.+++..|..|
T Consensus 72 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 151 (251)
T 3m19_A 72 QTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAF 151 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHc
Confidence 44456678999999999999999997777788999999999999999996555568999999999999999997666689
Q ss_pred CCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceec
Q 040641 82 GNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 82 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~ 124 (435)
+.+++|++|++++|++++..|..+.++++|+.|++++|.+.+.
T Consensus 152 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999999999999987777899999999999999999865
No 274
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=2.2e-16 Score=137.04 Aligned_cols=118 Identities=28% Similarity=0.361 Sum_probs=101.4
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.||..+. ++|+.|+|++|+++ .+|..+.++++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..|..|..
T Consensus 24 ~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~ 100 (193)
T 2wfh_A 24 VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDG 100 (193)
T ss_dssp SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTT
T ss_pred cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCC
Confidence 4676554 58999999999998 78889999999999999999999766677999999999999999999877788999
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceec
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~ 124 (435)
+++|++|++++|+++...+..+..+++|+.|++++|.+...
T Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 101 LKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99999999999999865555688899999999999988643
No 275
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=3.7e-16 Score=133.66 Aligned_cols=121 Identities=21% Similarity=0.194 Sum_probs=103.0
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.+|..+ .++|+.|+|++|++++..+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|.+++..+..+..
T Consensus 21 ~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 98 (177)
T 2o6r_A 21 SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDK 98 (177)
T ss_dssp SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhC
Confidence 356544 368999999999999766667899999999999999999655556899999999999999999777777899
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+++|++|++++|++++..+..+..+++|+.|++++|.+.+..|
T Consensus 99 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 99 LTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999999999999986555556889999999999999987655
No 276
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.67 E-value=6.3e-16 Score=141.80 Aligned_cols=120 Identities=25% Similarity=0.235 Sum_probs=105.2
Q ss_pred ccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCC
Q 040641 7 SEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSY 86 (435)
Q Consensus 7 ~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 86 (435)
+.++.+++|+.|+|++|.+++ + +.+..+++|++|+|++|.+++..|..++.+++|+.|+|++|.+++..|..++.+++
T Consensus 57 ~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 134 (272)
T 3rfs_A 57 QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTN 134 (272)
T ss_dssp TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT
T ss_pred cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCC
Confidence 358889999999999999985 4 48899999999999999999766667899999999999999999877777899999
Q ss_pred CCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcc
Q 040641 87 STYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 87 L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~ 128 (435)
|++|++++|++++..|..++++++|+.|++++|.+++..|..
T Consensus 135 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 176 (272)
T 3rfs_A 135 LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGV 176 (272)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHH
Confidence 999999999998766777889999999999999998765543
No 277
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=2.4e-17 Score=173.31 Aligned_cols=122 Identities=22% Similarity=0.258 Sum_probs=111.8
Q ss_pred cccCCccccCCCCCCeeecCCCcccc-----------------cCCcccC--CCCCCcEEECCCCcCccCCCcCccCCCC
Q 040641 2 TGSIPSEFGDSLKLQGLYLGNNQLTG-----------------SIPRSLG--QLGGLVKLNLTRNKFSGPVPTSLGNLKG 62 (435)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~l~~n~l~g-----------------~~p~~~~--~l~~L~~L~ls~n~l~~~~p~~~~~l~~ 62 (435)
+| ||.+|+++++|+.|+|++|+|+| .+|++++ ++++|++|+|++|.+.|.+|..++++++
T Consensus 438 ~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~ 516 (876)
T 4ecn_A 438 TF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPE 516 (876)
T ss_dssp EE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSS
T ss_pred cc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCC
Confidence 45 99999999999999999999998 4999988 9999999999999999999999999999
Q ss_pred CCeEECcCcc-cCC-cCCCcCCCCC-------CCCEEeCCCCCCcccCCc--cccCcCCCCcccccCCcceecCC
Q 040641 63 LSHLDLSSNF-FDG-GWPRSLGNLS-------YSTYLDLHDNKFTREIPQ--NLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 63 L~~L~l~~n~-l~~-~~p~~~~~l~-------~L~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
|+.|+|++|. ++| .+|..++.+. +|++|++++|+++ .+|. .++++++|+.|++++|.++ .+|
T Consensus 517 L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 517 LQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp CCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred CCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 9999999998 998 8888666555 9999999999998 8998 8999999999999999998 777
No 278
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.66 E-value=9e-16 Score=141.74 Aligned_cols=122 Identities=23% Similarity=0.245 Sum_probs=100.1
Q ss_pred CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCc-CccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNK-FSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~-l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
|..|..+++|+.|+|++|.+++..|..+..+++|++|+|++|. +....|..+..+++|+.|++++|.+++..|..+.++
T Consensus 49 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 128 (285)
T 1ozn_A 49 AASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGL 128 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC
T ss_pred HHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCC
Confidence 4568888889999999998887778888888899999999887 765557778888888999999888887777888888
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
++|++|++++|.+++..+..++++++|+.|++++|.+++..+.
T Consensus 129 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 129 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred cCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 8888888888888766666688888888888888888765443
No 279
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.66 E-value=3.5e-16 Score=154.37 Aligned_cols=111 Identities=23% Similarity=0.224 Sum_probs=63.6
Q ss_pred CCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeC
Q 040641 13 LKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDL 92 (435)
Q Consensus 13 ~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 92 (435)
++|+.|+|++|.+++.+|..++.+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..|..++.+++|++|++
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 35555555555555555555555555555555555555544555555555555555555555544555555555555555
Q ss_pred CCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 93 HDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 93 ~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
++|++++..|..+.++++|+.|++++|.+++
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcccccChhhccccccccEEECCCCcccc
Confidence 5555555555555555555555555555554
No 280
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.65 E-value=2.3e-15 Score=139.05 Aligned_cols=123 Identities=22% Similarity=0.206 Sum_probs=107.1
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcc-cCCcCCCcCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNF-FDGGWPRSLGN 83 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~ 83 (435)
+|..+ .++|+.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|. ++...|..+..
T Consensus 26 ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~ 103 (285)
T 1ozn_A 26 VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG 103 (285)
T ss_dssp CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTT
T ss_pred CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcC
Confidence 55544 4689999999999997777789999999999999999998778899999999999999997 77666888999
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+++|++|++++|.+++..|..+.++++|+.|++++|.+++..+..+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 149 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF 149 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHh
Confidence 9999999999999998778889999999999999999986554433
No 281
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.65 E-value=2.4e-15 Score=132.15 Aligned_cols=121 Identities=22% Similarity=0.236 Sum_probs=106.4
Q ss_pred CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
+..++.+++|+.|+|++|++++..+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|.+++..+..+..++
T Consensus 45 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 124 (208)
T 2o6s_A 45 NGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLT 124 (208)
T ss_dssp TTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCC
Confidence 34578999999999999999966566679999999999999999965555689999999999999999977677789999
Q ss_pred CCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 86 YSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 86 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+|++|++++|++++..+..+.++++|+.|++++|.+.+..|
T Consensus 125 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 125 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred cCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99999999999987666668999999999999999887665
No 282
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.65 E-value=3.3e-15 Score=136.83 Aligned_cols=111 Identities=23% Similarity=0.192 Sum_probs=63.9
Q ss_pred CCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeC
Q 040641 13 LKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDL 92 (435)
Q Consensus 13 ~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 92 (435)
++|+.|+|++|++++..+..+.++++|++|+|++|.++...+..|..+++|+.|+|++|.+++..+..+..+++|++|++
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 35666666666666444445666666666666666665322223455666666666666665444445555666666666
Q ss_pred CCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 93 HDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 93 ~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
++|.+++..|..++++++|++|++++|.+++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 147 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQS 147 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCc
Confidence 6666655444555566666666666665553
No 283
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=3.4e-16 Score=132.69 Aligned_cols=110 Identities=26% Similarity=0.286 Sum_probs=86.2
Q ss_pred CCCCCeeecCCCccc-ccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEE
Q 040641 12 SLKLQGLYLGNNQLT-GSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYL 90 (435)
Q Consensus 12 l~~L~~L~l~~n~l~-g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 90 (435)
.++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467888888888887 77887778888888888888888754 677788888888888888887677777778888888
Q ss_pred eCCCCCCcccCC--ccccCcCCCCcccccCCcceec
Q 040641 91 DLHDNKFTREIP--QNLGNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 91 ~l~~n~~~~~~p--~~~~~l~~L~~l~l~~n~l~g~ 124 (435)
++++|.+++ +| ..+..+++|+.|++++|.+++.
T Consensus 101 ~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~ 135 (168)
T 2ell_A 101 NLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNL 135 (168)
T ss_dssp ECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTS
T ss_pred eccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcch
Confidence 888888865 33 6677888888888888887754
No 284
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=2.1e-16 Score=131.09 Aligned_cols=114 Identities=22% Similarity=0.239 Sum_probs=102.0
Q ss_pred CCCCCCeeecCCCccc-ccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCE
Q 040641 11 DSLKLQGLYLGNNQLT-GSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTY 89 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~-g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 89 (435)
..++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..++.+++|+.|++++|.+++.+|..++.+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3578999999999998 88999999999999999999999864 78999999999999999999888888888999999
Q ss_pred EeCCCCCCccc-CCccccCcCCCCcccccCCcceecCC
Q 040641 90 LDLHDNKFTRE-IPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 90 L~l~~n~~~~~-~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
|++++|.+++. .|..++.+++|+.|++++|.+++..+
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999999863 44789999999999999999986544
No 285
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.64 E-value=2.3e-15 Score=139.29 Aligned_cols=106 Identities=29% Similarity=0.255 Sum_probs=49.6
Q ss_pred CCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCC
Q 040641 14 KLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLH 93 (435)
Q Consensus 14 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 93 (435)
.|+.|+|++|.+++..|..+.++++|+.|+|++|.+++ +|.. +.+++|+.|+|++|.++ .+|..+..+++|++|+++
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 45555555555554444445555555555555555442 2221 34444444444444444 344444444444444444
Q ss_pred CCCCcccCCccccCcCCCCcccccCCcce
Q 040641 94 DNKFTREIPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 94 ~n~~~~~~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
+|++++..|..|.++++|+.|++++|.++
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCC
Confidence 44444333334444444444444444444
No 286
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.63 E-value=1.4e-15 Score=155.59 Aligned_cols=127 Identities=21% Similarity=0.195 Sum_probs=110.5
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCC
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 82 (435)
+-.|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..++
T Consensus 46 ~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 125 (606)
T 3vq2_A 46 ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIG 125 (606)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCT
T ss_pred EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccC
Confidence 43455788999999999999999987788899999999999999999987788899999999999999999877778899
Q ss_pred CCCCCCEEeCCCCCCcc-cCCccccCcCCCCcccccCCcceecCCccc
Q 040641 83 NLSYSTYLDLHDNKFTR-EIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
++++|++|++++|.+++ .+|..++++++|++|++++|.+++..|..+
T Consensus 126 ~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 126 QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 173 (606)
T ss_dssp TCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhh
Confidence 99999999999999875 679999999999999999999988766543
No 287
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.63 E-value=1.7e-15 Score=139.21 Aligned_cols=123 Identities=24% Similarity=0.227 Sum_probs=83.8
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
+|..+. ++|+.|+|++|++++..+..+.++++|++|+|++|.+++..+..+..+++|+.|+|++|.+++..|..+.++
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 455443 357777777777775555577777777777777777775555567777777777777777776666667777
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee-cCCccc
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG-KIPEKI 129 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g-~~p~~~ 129 (435)
++|++|++++|.+++..+..++++++|+.|++++|.+.+ .+|..+
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~ 145 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 145 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhh
Confidence 777777777777766555567777777777777777664 234433
No 288
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=5.1e-16 Score=128.77 Aligned_cols=114 Identities=28% Similarity=0.232 Sum_probs=102.2
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCc-CCCcC
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGG-WPRSL 81 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~ 81 (435)
|.+|..++.+++|+.|+|++|.+++. ..++.+++|++|+|++|.+++.+|..++.+++|+.|++++|.+++. .|..+
T Consensus 32 ~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~ 109 (149)
T 2je0_A 32 GKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPL 109 (149)
T ss_dssp TBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGG
T ss_pred hHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHH
Confidence 68999999999999999999999965 7899999999999999999987888888899999999999999873 44889
Q ss_pred CCCCCCCEEeCCCCCCcccCC---ccccCcCCCCcccccC
Q 040641 82 GNLSYSTYLDLHDNKFTREIP---QNLGNLAQLEHLDVLR 118 (435)
Q Consensus 82 ~~l~~L~~L~l~~n~~~~~~p---~~~~~l~~L~~l~l~~ 118 (435)
+.+++|++|++++|.+++..+ ..++.+++|+.|++++
T Consensus 110 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 110 KKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp GGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred hhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999999999999986555 4788999999999863
No 289
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.63 E-value=2.7e-16 Score=163.52 Aligned_cols=121 Identities=29% Similarity=0.356 Sum_probs=108.4
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
.|..+..+..|+.|+|++|.+. .+|..+.++++|+.|+|++|.|+ .+|..|+.|++|+.|||++|.|+ .+|..|++|
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 292 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC 292 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC
Confidence 3567889999999999999998 89999999999999999999999 89999999999999999999999 789999999
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
++|++|+|++|.++ .+|..|+++++|+.|+|++|.++|.+|..+
T Consensus 293 ~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 293 FQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp TTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred CCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 99999999999996 899999999999999999999998888654
No 290
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.62 E-value=1.3e-15 Score=156.47 Aligned_cols=119 Identities=23% Similarity=0.214 Sum_probs=59.7
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
+|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|+++++|
T Consensus 71 ~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L 150 (635)
T 4g8a_A 71 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 150 (635)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTC
T ss_pred HHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCccc
Confidence 45555555555555555554334445555555555555555553333344555555555555555554333445555555
Q ss_pred CEEeCCCCCCcc-cCCccccCcCCCCcccccCCcceecCC
Q 040641 88 TYLDLHDNKFTR-EIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 88 ~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|++++|.+++ .+|..++.+++|++|++++|.+++..|
T Consensus 151 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 151 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 555555555533 234445555555555555555554433
No 291
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.62 E-value=1.9e-15 Score=140.99 Aligned_cols=121 Identities=20% Similarity=0.258 Sum_probs=83.8
Q ss_pred CCccccCCCCCCeeecCCCcccccCC-cccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCC-cCCCcCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIP-RSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDG-GWPRSLG 82 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~ 82 (435)
+|..+..+++|+.|+|++|.+++..+ ..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+++ .+|..+.
T Consensus 93 l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 172 (306)
T 2z66_A 93 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 172 (306)
T ss_dssp EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHh
Confidence 55566777777777777777764433 466777777777777777776666667777777777777777765 4666777
Q ss_pred CCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecC
Q 040641 83 NLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKI 125 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~ 125 (435)
.+++|++|++++|.+++..|..+.++++|+.|++++|.+++..
T Consensus 173 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 173 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred hCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 7777777777777777666666777777777777777766543
No 292
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.62 E-value=2.8e-15 Score=127.21 Aligned_cols=110 Identities=23% Similarity=0.215 Sum_probs=98.1
Q ss_pred CCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCC
Q 040641 14 KLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLH 93 (435)
Q Consensus 14 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 93 (435)
..+.|++++|.++ .+|..+. ++|+.|+|++|++++..|..|..+++|+.|+|++|.|++..|..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4678999999998 6888774 899999999999998778889999999999999999997766678999999999999
Q ss_pred CCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 94 DNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 94 ~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+|++++..+..+.++++|+.|++++|.+....+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999997666679999999999999999876543
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.62 E-value=2e-15 Score=140.92 Aligned_cols=124 Identities=22% Similarity=0.220 Sum_probs=113.9
Q ss_pred ccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCcc-CCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 7 SEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSG-PVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 7 ~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
..+..+++|+.|+|++|.+.+..|..+..+++|+.|+|++|.+++ .+|..+..+++|+.|+|++|.+++..|..+..++
T Consensus 120 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 199 (306)
T 2z66_A 120 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 199 (306)
T ss_dssp TTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC
Confidence 478899999999999999998889999999999999999999987 5888999999999999999999988899999999
Q ss_pred CCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcccc
Q 040641 86 YSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKIC 130 (435)
Q Consensus 86 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~~ 130 (435)
+|++|++++|.+++..+..+..+++|+.|++++|.+.+..|..+.
T Consensus 200 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 200 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp TCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred CCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 999999999999877777889999999999999999988776554
No 294
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.61 E-value=6.2e-15 Score=135.02 Aligned_cols=122 Identities=26% Similarity=0.268 Sum_probs=102.5
Q ss_pred CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
|..|..+++|++|+|++|.++...+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|.+++..|..|+.++
T Consensus 54 ~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 133 (270)
T 2o6q_A 54 SKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT 133 (270)
T ss_dssp TTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCc
Confidence 34788999999999999999854444568899999999999999865555678899999999999999987777889999
Q ss_pred CCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 86 YSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 86 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
+|++|++++|.+++..+..+..+++|+.|++++|.+++..+.
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 999999999999865555688899999999999988865443
No 295
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.60 E-value=1.9e-15 Score=149.02 Aligned_cols=114 Identities=18% Similarity=0.141 Sum_probs=57.9
Q ss_pred CCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCC-cCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEe
Q 040641 13 LKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVP-TSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLD 91 (435)
Q Consensus 13 ~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 91 (435)
++|++|+|++|.+++..|..++++++|++|+|++|.+.+.+| ..|..+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 345555555555554445555555555555555555544332 2355555555555555555544455555555555555
Q ss_pred CCCCCCcccCCcc--ccCcCCCCcccccCCcceecCC
Q 040641 92 LHDNKFTREIPQN--LGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 92 l~~n~~~~~~p~~--~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+++|++++.+|.. ++++++|+.|++++|.+++..|
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 146 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQP 146 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCC
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCc
Confidence 5555554433333 4455555555555555544434
No 296
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.60 E-value=2.5e-15 Score=154.35 Aligned_cols=124 Identities=23% Similarity=0.226 Sum_probs=108.0
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
+||..+. ++++.|||++|+|++..|.+|.++++|++|+|++|++++..|.+|.++++|++|+|++|.|++..|..|.+
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 3666553 47899999999999766778999999999999999999766668999999999999999999766678999
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee-cCCccc
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG-KIPEKI 129 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g-~~p~~~ 129 (435)
+++|++|++++|++++..+..|+++++|+.|++++|.+.+ .+|..+
T Consensus 123 L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~ 169 (635)
T 4g8a_A 123 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 169 (635)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred CCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh
Confidence 9999999999999997666779999999999999999875 345543
No 297
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.60 E-value=6.4e-15 Score=127.68 Aligned_cols=113 Identities=23% Similarity=0.254 Sum_probs=101.9
Q ss_pred CCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCc-CccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCC
Q 040641 15 LQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPT-SLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLH 93 (435)
Q Consensus 15 L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 93 (435)
-+.|++++|+++ .+|..+.. +|+.|+|++|.+++..+. .++.+++|+.|+|++|.+++..|..|.++++|++|+++
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 378999999996 89987765 999999999999865544 38999999999999999999889999999999999999
Q ss_pred CCCCcccCCccccCcCCCCcccccCCcceecCCcccc
Q 040641 94 DNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKIC 130 (435)
Q Consensus 94 ~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~~ 130 (435)
+|++++..|..+.++++|+.|++++|.+++..|..+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 123 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE 123 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSST
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhh
Confidence 9999988888899999999999999999998887553
No 298
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.60 E-value=7e-15 Score=135.10 Aligned_cols=124 Identities=22% Similarity=0.210 Sum_probs=111.4
Q ss_pred CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
+..|.++++|+.|+|++|++++..+..+.++++|++|+|++|.+++..|..+..+++|+.|++++|.+++..+..++.++
T Consensus 45 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 124 (276)
T 2z62_A 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLK 124 (276)
T ss_dssp TTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCT
T ss_pred HhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCC
Confidence 44799999999999999999977777899999999999999999987778899999999999999999987777899999
Q ss_pred CCCEEeCCCCCCcc-cCCccccCcCCCCcccccCCcceecCCccc
Q 040641 86 YSTYLDLHDNKFTR-EIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 86 ~L~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+|++|++++|.+++ .+|..++++++|+.|++++|.+++..+..+
T Consensus 125 ~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 125 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 99999999999976 479999999999999999999987655433
No 299
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.60 E-value=2.8e-15 Score=143.29 Aligned_cols=117 Identities=22% Similarity=0.175 Sum_probs=84.3
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccC-CCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLG-QLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
||..+.. .++.|+|++|+|++..+..+. ++++|+.|+|++|++++..|..|..+++|+.|+|++|.|++..+..|.+
T Consensus 33 iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 110 (361)
T 2xot_A 33 VPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSD 110 (361)
T ss_dssp CCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred cCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCC
Confidence 5555433 467777777777765555565 7777777777777777655556777777777777777777655566777
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+++|++|+|++|++++..|..|.++++|+.|++++|.+++
T Consensus 111 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 111 LQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred CcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 7777777777777776667777777777777777777764
No 300
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.59 E-value=9.3e-15 Score=135.21 Aligned_cols=119 Identities=28% Similarity=0.253 Sum_probs=105.3
Q ss_pred cCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCE
Q 040641 10 GDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTY 89 (435)
Q Consensus 10 ~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 89 (435)
+.+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|.+++..|..|..+++|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 78899999999999998 89999999999999999999999766677999999999999999999777777889999999
Q ss_pred EeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcccc
Q 040641 90 LDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKIC 130 (435)
Q Consensus 90 L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~~ 130 (435)
|++++|++++..+..+.++++|+.|++++|.++ .+|..+.
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~ 192 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFF 192 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhc
Confidence 999999998655555688999999999999998 5676554
No 301
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.59 E-value=1.2e-14 Score=148.38 Aligned_cols=119 Identities=18% Similarity=0.142 Sum_probs=83.3
Q ss_pred CCcc-ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 5 IPSE-FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 5 lp~~-~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
+|+. ++++++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+++..|..|++
T Consensus 66 lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 145 (597)
T 3oja_B 66 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHN 145 (597)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhcc
Confidence 4543 566777777777777777666667777777777777777777655556677777777777777777544444577
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+++|++|++++|.+++..|..++++++|+.|++++|.+++
T Consensus 146 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 146 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 7777777777777776666667777777777777776654
No 302
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.59 E-value=8.5e-15 Score=124.67 Aligned_cols=107 Identities=23% Similarity=0.234 Sum_probs=95.1
Q ss_pred CCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCCC
Q 040641 15 LQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLHD 94 (435)
Q Consensus 15 L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 94 (435)
-+.+++++|+++ .+|..+. ++|+.|+|++|++++..|..|..+++|+.|+|++|.|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999997 8998775 8999999999999987788999999999999999999975555678999999999999
Q ss_pred CCCcccCCccccCcCCCCcccccCCcceec
Q 040641 95 NKFTREIPQNLGNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 95 n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~ 124 (435)
|++++..+..+.++++|+.|++++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999865555699999999999999988743
No 303
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.58 E-value=3.4e-15 Score=152.80 Aligned_cols=125 Identities=18% Similarity=0.179 Sum_probs=90.1
Q ss_pred CCccccCCCCCCeeecCCCcccccCC-cccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCC-cCCCcCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIP-RSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDG-GWPRSLG 82 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~ 82 (435)
+|..+..+++|+.|++++|.+.+..| ..+..+++|+.|++++|.+.+.+|..++.+++|+.|++++|.+++ .+|..++
T Consensus 391 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 470 (606)
T 3vq2_A 391 MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFA 470 (606)
T ss_dssp ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhc
Confidence 55667777777777777777776666 567777777777777777777677777777777777777777776 3666777
Q ss_pred CCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 83 NLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
.+++|++|++++|++++..|..++++++|+.|++++|.+++.+|..+
T Consensus 471 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 517 (606)
T 3vq2_A 471 NTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHY 517 (606)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGT
T ss_pred cCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHc
Confidence 77777777777777777667777777777777777777776655544
No 304
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.58 E-value=7.3e-15 Score=145.87 Aligned_cols=121 Identities=26% Similarity=0.223 Sum_probs=73.9
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
+|..+. +.|+.|+|++|++++..|..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|.+++..+..|.++
T Consensus 26 ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 103 (477)
T 2id5_A 26 VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 103 (477)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTC
T ss_pred CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCC
Confidence 444442 356666666666665555666666666666666666665556666666666666666666664434445666
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
++|++|++++|++++..|..+.++++|+.|++++|.+.+..|.
T Consensus 104 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred CCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh
Confidence 6666666666666665566666666666666666666554443
No 305
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.58 E-value=3.7e-15 Score=129.76 Aligned_cols=116 Identities=19% Similarity=0.243 Sum_probs=103.8
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.+| .+..+++|+.|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|+.|++++|.+++..|..++.
T Consensus 58 ~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~ 134 (197)
T 4ezg_A 58 DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT 134 (197)
T ss_dssp CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTT
T ss_pred ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhh
Confidence 456 6889999999999999775 3458999999999999999999888899999999999999999999888889999
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+++|++|++++|.+.+.+| .+..+++|+.|++++|.+++
T Consensus 135 l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 135 LPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp CSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred CCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC
Confidence 9999999999998445677 68899999999999998875
No 306
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.58 E-value=2.4e-16 Score=145.18 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=79.5
Q ss_pred cCcceeeeecccCcceEEEEEcCCCCEEEEEEcccccc------------------ccHHHHHHHHHHhccCCCCCceeE
Q 040641 183 LKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKT------------------QGHRQFTAEMETLGKVKHQNLVLL 244 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~niv~l 244 (435)
..+.+.+.||+|+||.||+|...+|+.||||.++.... .....+.+|++++++++ | +++
T Consensus 90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 34567799999999999999987799999999864321 12456899999999999 4 666
Q ss_pred EEEEEeCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 245 LGYCSFDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 245 ~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
.+++.. +..++||||+++|+|.+ +.. . ....++.|+++||.|||+
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~--~~~~i~~qi~~~l~~lH~ 211 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV--------E--NPDEVLDMILEEVAKFYH 211 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC--------S--CHHHHHHHHHHHHHHHHH
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch--------h--hHHHHHHHHHHHHHHHHH
Confidence 665543 56699999999999877 421 1 233689999999999885
No 307
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.57 E-value=3e-15 Score=126.75 Aligned_cols=118 Identities=28% Similarity=0.231 Sum_probs=105.8
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcC-CCcC
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGW-PRSL 81 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~ 81 (435)
|.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|+.|+|++|.+++.. +..+
T Consensus 39 ~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l 116 (168)
T 2ell_A 39 GKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPL 116 (168)
T ss_dssp TBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGG
T ss_pred hhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHH
Confidence 68999899999999999999999965 78999999999999999999878888888999999999999998632 2789
Q ss_pred CCCCCCCEEeCCCCCCcccCC---ccccCcCCCCcccccCCcce
Q 040641 82 GNLSYSTYLDLHDNKFTREIP---QNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 82 ~~l~~L~~L~l~~n~~~~~~p---~~~~~l~~L~~l~l~~n~l~ 122 (435)
..+++|++|++++|.+++..+ ..+..+++|+.|+++.|.+.
T Consensus 117 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 117 KKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp SSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred hcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999999999999986444 37899999999999999876
No 308
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.57 E-value=2.9e-15 Score=151.38 Aligned_cols=120 Identities=26% Similarity=0.279 Sum_probs=75.9
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
||..+. ++|++|+|++|++++..|..+.++++|++|+|++|++++..|..|+.+++|++|||++|.+++..|..|+++
T Consensus 20 ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 97 (549)
T 2z81_A 20 IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL 97 (549)
T ss_dssp CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTC
T ss_pred ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccC
Confidence 555443 466666666666666556666666666666666666665555566666666666666666665555556666
Q ss_pred CCCCEEeCCCCCCcc-cCCccccCcCCCCcccccCCcceecCC
Q 040641 85 SYSTYLDLHDNKFTR-EIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|++|++++|.+++ .+|..++++++|++|++++|.+.+.+|
T Consensus 98 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~ 140 (549)
T 2z81_A 98 SSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR 140 (549)
T ss_dssp TTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred CCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccC
Confidence 666666666666654 345556666666666666666444444
No 309
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.57 E-value=1.1e-14 Score=139.26 Aligned_cols=118 Identities=22% Similarity=0.190 Sum_probs=102.6
Q ss_pred Ccccc-CCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 6 PSEFG-DSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 6 p~~~~-~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
+..+. .+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..|..|.++
T Consensus 56 ~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 135 (361)
T 2xot_A 56 AEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDM 135 (361)
T ss_dssp TTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred hhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCc
Confidence 44566 89999999999999997777889999999999999999997666679999999999999999998888899999
Q ss_pred CCCCEEeCCCCCCcccCCccc----cCcCCCCcccccCCcceec
Q 040641 85 SYSTYLDLHDNKFTREIPQNL----GNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~----~~l~~L~~l~l~~n~l~g~ 124 (435)
++|++|+|++|++++ +|..+ ..+++|+.|++++|.+++.
T Consensus 136 ~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 136 AQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp TTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred ccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 999999999999985 66554 5789999999999999853
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.57 E-value=1.4e-15 Score=142.45 Aligned_cols=111 Identities=24% Similarity=0.192 Sum_probs=87.9
Q ss_pred CCCCCCeeecCCCcccccCCccc--CCCCCCcEEECCCCcCccCCCcCccCC-----CCCCeEECcCcccCCcCCCcCCC
Q 040641 11 DSLKLQGLYLGNNQLTGSIPRSL--GQLGGLVKLNLTRNKFSGPVPTSLGNL-----KGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~g~~p~~~--~~l~~L~~L~ls~n~l~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
++++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|.+++..|..|+.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 67888888888888888888876 7888888888888888865 7767666 78888888888888777778888
Q ss_pred CCCCCEEeCCCCCCccc--CCccc--cCcCCCCcccccCCcce
Q 040641 84 LSYSTYLDLHDNKFTRE--IPQNL--GNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~--~p~~~--~~l~~L~~l~l~~n~l~ 122 (435)
+++|++|++++|++++. +|..+ +++++|+.|++++|.++
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 88888888888887765 33344 77788888888888776
No 311
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.57 E-value=6.4e-15 Score=148.65 Aligned_cols=108 Identities=27% Similarity=0.335 Sum_probs=101.0
Q ss_pred CCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCC
Q 040641 14 KLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLH 93 (435)
Q Consensus 14 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 93 (435)
.|+.|+|++|+|++ +|. ++.+++|+.|+|++|.++ .+|..++.+++|+.|+|++|.|++ +| .++.+++|++|+++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999995 786 999999999999999999 899999999999999999999996 78 89999999999999
Q ss_pred CCCCcccC-CccccCcCCCCcccccCCcceecCC
Q 040641 94 DNKFTREI-PQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 94 ~n~~~~~~-p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+|++++.. |..++++++|+.|++++|.+++.+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999876 9999999999999999999997655
No 312
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.56 E-value=7.2e-16 Score=160.31 Aligned_cols=125 Identities=22% Similarity=0.292 Sum_probs=112.4
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.||..+..+++|+.|+|++|.|+ .+|..++++++|++|+|++|.|+ .+|..|+.|++|+.|+|++|.|+ .+|..|++
T Consensus 238 ~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~ 314 (727)
T 4b8c_D 238 NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGN 314 (727)
T ss_dssp CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTS
T ss_pred CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhc
Confidence 58888999999999999999999 89999999999999999999999 89999999999999999999997 78999999
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCC-CCcccccCCcceecCCccccc
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQ-LEHLDVLRNMLCGKIPEKICK 131 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~-L~~l~l~~n~l~g~~p~~~~~ 131 (435)
|++|++|+|++|.+++.+|..+..+.. +..+++++|.++|.+|..+..
T Consensus 315 l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~ 363 (727)
T 4b8c_D 315 LCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRF 363 (727)
T ss_dssp CTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---
T ss_pred CCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccce
Confidence 999999999999999999988765532 235789999999999987654
No 313
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.56 E-value=9.3e-15 Score=155.13 Aligned_cols=127 Identities=24% Similarity=0.191 Sum_probs=94.3
Q ss_pred ccCCccccCCCCCCeeecCCCcccccC-CcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCc-
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSI-PRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRS- 80 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~-p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~- 80 (435)
+..|..|+++++|++|+|++|.+.+.+ |..+.++++|++|+|++|.+++..|..|+.+++|+.|+|++|.+++.+|..
T Consensus 38 ~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 117 (844)
T 3j0a_A 38 TVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDG 117 (844)
T ss_dssp EECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTC
T ss_pred ccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCc
Confidence 445667777888888888877665566 667788888888888888887777777888888888888888887766654
Q ss_pred -CCCCCCCCEEeCCCCCCcccCC-ccccCcCCCCcccccCCcceecCCccc
Q 040641 81 -LGNLSYSTYLDLHDNKFTREIP-QNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 81 -~~~l~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
++++++|++|++++|.+++..| ..++++++|+.|++++|.+++..|..+
T Consensus 118 ~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 118 YFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp CCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred cccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 7778888888888888776544 467778888888888887776655443
No 314
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.56 E-value=1e-14 Score=147.96 Aligned_cols=124 Identities=20% Similarity=0.253 Sum_probs=91.1
Q ss_pred CCccccCCCCCCeeecCCCcccccCC-cccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccC-CcCCCcCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIP-RSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFD-GGWPRSLG 82 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~-~~~p~~~~ 82 (435)
+|+.+..+++|+.|++++|.+.+..| ..+.++++|+.|++++|.+.+..|..+..+++|+.|++++|.++ +.+|..+.
T Consensus 388 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~ 467 (570)
T 2z63_A 388 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 467 (570)
T ss_dssp EEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred ccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh
Confidence 34447777777777777777776555 45677777777777777777777777777777777777777776 56777777
Q ss_pred CCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcc
Q 040641 83 NLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~ 128 (435)
.+++|++|++++|++++..|..++++++|+.|++++|.+++..|..
T Consensus 468 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 513 (570)
T 2z63_A 468 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGI 513 (570)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHH
Confidence 7777777777777777766777777777777777777777655443
No 315
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.56 E-value=9.7e-15 Score=149.05 Aligned_cols=114 Identities=16% Similarity=0.056 Sum_probs=54.0
Q ss_pred CCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeC
Q 040641 13 LKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDL 92 (435)
Q Consensus 13 ~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 92 (435)
.+++.|++++|.+....+..+.++++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+++..|..|+++++|++|++
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 44455555555554222223344555555555555555444444555555555555555555444444455555555555
Q ss_pred CCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 93 HDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 93 ~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|.+++..+..++++++|++|++++|.+++..|
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 164 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 164 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh
Confidence 5555543222223445555555555555544433
No 316
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.56 E-value=2.9e-14 Score=141.53 Aligned_cols=123 Identities=22% Similarity=0.198 Sum_probs=112.2
Q ss_pred cccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcC
Q 040641 2 TGSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSL 81 (435)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~ 81 (435)
++-.|..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..|..|
T Consensus 45 ~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 124 (477)
T 2id5_A 45 KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMF 124 (477)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHc
Confidence 34446789999999999999999998889999999999999999999996444568999999999999999999889999
Q ss_pred CCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceec
Q 040641 82 GNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 82 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~ 124 (435)
..+++|++|++++|.+++..|..+.++++|+.|++++|.+++.
T Consensus 125 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 125 QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp TTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred cccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 9999999999999999988888999999999999999988753
No 317
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.55 E-value=1.7e-14 Score=146.30 Aligned_cols=123 Identities=22% Similarity=0.191 Sum_probs=97.7
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
.|..|.++++|++|+|++|++++..|..+.++++|++|+|++|.+++..|..|+.+++|++|++++|.+++..+..++++
T Consensus 44 ~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l 123 (570)
T 2z63_A 44 GSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 123 (570)
T ss_dssp CTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTC
T ss_pred ChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcccccc
Confidence 34567888888888888888887667778888888888888888886666778888888888888888876545568888
Q ss_pred CCCCEEeCCCCCCcc-cCCccccCcCCCCcccccCCcceecCCc
Q 040641 85 SYSTYLDLHDNKFTR-EIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
++|++|++++|.+++ .+|..++++++|++|++++|.+++..|.
T Consensus 124 ~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp TTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred ccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 888888888888876 4788888888888888888888765554
No 318
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.55 E-value=1.6e-14 Score=144.97 Aligned_cols=110 Identities=23% Similarity=0.226 Sum_probs=50.1
Q ss_pred CCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCcc--CCCcCccCCCCCCeEECcCcccCCcCCCc-CCCCCCC
Q 040641 11 DSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSG--PVPTSLGNLKGLSHLDLSSNFFDGGWPRS-LGNLSYS 87 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L 87 (435)
.+++|+.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..++.+++|+.|++++|.+++.+|.. +..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 34444444444444444444444444444444444444443 23334444444444444444444433332 3444444
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCcce
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
++|++++|.+++.+|..+. ++|+.|++++|.++
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 4444444444444443332 34444444444444
No 319
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.55 E-value=8.5e-15 Score=127.44 Aligned_cols=115 Identities=16% Similarity=0.169 Sum_probs=102.6
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
..+.+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|+.|++++|.+++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3467889999999999998 778 7999999999999999775 34589999999999999999998889999999999
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|++++|.+++..|..++++++|+.|++++|.+.+.+|
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~ 153 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM 153 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH
Confidence 999999999998889999999999999999998444444
No 320
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=2.1e-15 Score=141.15 Aligned_cols=125 Identities=23% Similarity=0.192 Sum_probs=91.7
Q ss_pred CcccCCccc--cCCCCCCeeecCCCcccccCCcccCCC-----CCCcEEECCCCcCccCCCcCccCCCCCCeEECcCccc
Q 040641 1 LTGSIPSEF--GDSLKLQGLYLGNNQLTGSIPRSLGQL-----GGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFF 73 (435)
Q Consensus 1 l~g~lp~~~--~~l~~L~~L~l~~n~l~g~~p~~~~~l-----~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l 73 (435)
++|.+|..+ +.+++|+.|+|++|++++. |..++.+ ++|++|+|++|++++..|..++.+++|+.|+|++|.+
T Consensus 107 l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 185 (312)
T 1wwl_A 107 VTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPE 185 (312)
T ss_dssp CBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTT
T ss_pred ccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCc
Confidence 356777766 7788888888888888865 7777666 7888888888888876667788888888888888887
Q ss_pred CCc--CCCcC--CCCCCCCEEeCCCCCCcc--cCC-ccccCcCCCCcccccCCcceecCC
Q 040641 74 DGG--WPRSL--GNLSYSTYLDLHDNKFTR--EIP-QNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 74 ~~~--~p~~~--~~l~~L~~L~l~~n~~~~--~~p-~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
.+. +|..+ +.+++|++|++++|++++ .++ ..+.++++|+.|++++|.+++.+|
T Consensus 186 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 186 LGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 765 33344 778888888888888762 223 223566788888888888877554
No 321
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.55 E-value=1.3e-14 Score=148.31 Aligned_cols=121 Identities=21% Similarity=0.029 Sum_probs=71.2
Q ss_pred CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+.+++|++|++++|.+++..|..+++++
T Consensus 50 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~ 129 (606)
T 3t6q_A 50 NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQK 129 (606)
T ss_dssp TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCT
T ss_pred hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCC
Confidence 44566666666666666666655566666666666666666666655555666666666666666666654455566666
Q ss_pred CCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 86 YSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 86 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+|++|++++|.+++..++.+..+++|+.|++++|.+++..|
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp TCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred cccEEECCCCcccccCcccccCCcccCEEEcccCcccccCh
Confidence 66666666666654222223335666666666666554433
No 322
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.55 E-value=5.2e-14 Score=121.97 Aligned_cols=108 Identities=25% Similarity=0.281 Sum_probs=98.5
Q ss_pred CCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCCC
Q 040641 15 LQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLHD 94 (435)
Q Consensus 15 L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 94 (435)
-+.+++++|.++ .+|..+. ++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++..|..|.++++|++|++++
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 368999999998 8898765 68999999999998 7999999999999999999999988888899999999999999
Q ss_pred CCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 95 NKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 95 n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
|++++..|..|..+++|+.|++++|.+++..+
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~ 119 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPE 119 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeCh
Confidence 99998778889999999999999999985433
No 323
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.55 E-value=2.7e-14 Score=144.72 Aligned_cols=116 Identities=23% Similarity=0.234 Sum_probs=76.5
Q ss_pred cCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCcc--CCCcCccCCCCCCeEECcCcccCCcCCC-cCCCCCC
Q 040641 10 GDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSG--PVPTSLGNLKGLSHLDLSSNFFDGGWPR-SLGNLSY 86 (435)
Q Consensus 10 ~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~ 86 (435)
+.+++|+.|+|++|++++.+|..++++++|+.|+|++|++++ .+|..++.+++|+.|++++|.+++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 556677777777777776677777777777777777777764 2334566777777777777777764554 3556666
Q ss_pred CCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcc
Q 040641 87 STYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 87 L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~ 128 (435)
|++|++++|++++.+|..+. ++|+.|++++|.++ .+|..
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 77777777776666655443 46666666666665 45543
No 324
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.54 E-value=1.3e-14 Score=146.53 Aligned_cols=130 Identities=22% Similarity=0.236 Sum_probs=116.4
Q ss_pred cccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCC-cCCCc
Q 040641 2 TGSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDG-GWPRS 80 (435)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~ 80 (435)
++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|.+++..|..++.+++|++|+|++|.+++ ..|..
T Consensus 39 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 118 (549)
T 2z81_A 39 TYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSL 118 (549)
T ss_dssp CEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCS
T ss_pred CccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhh
Confidence 44457789999999999999999998888999999999999999999997666669999999999999999986 46788
Q ss_pred CCCCCCCCEEeCCCCCCcccCC-ccccCcCCCCcccccCCcceecCCccccc
Q 040641 81 LGNLSYSTYLDLHDNKFTREIP-QNLGNLAQLEHLDVLRNMLCGKIPEKICK 131 (435)
Q Consensus 81 ~~~l~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~l~l~~n~l~g~~p~~~~~ 131 (435)
++++++|++|++++|.+.+.+| ..++++++|+.|++++|.+++.+|..+..
T Consensus 119 ~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 119 FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp CTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred hhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 9999999999999999666776 57999999999999999999988876643
No 325
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.54 E-value=6e-14 Score=138.27 Aligned_cols=121 Identities=21% Similarity=0.148 Sum_probs=93.0
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
+|..+. ++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+..|..+
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 555443 578888888888887778888888888888888888887666778888888888888888886666668888
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
++|++|++++|+++...+..+.++++|+.|++++|+..+.+|.
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE 189 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh
Confidence 8888888888888765555777888888888887554444443
No 326
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.54 E-value=1.5e-14 Score=150.06 Aligned_cols=121 Identities=22% Similarity=0.177 Sum_probs=89.8
Q ss_pred ccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCC
Q 040641 7 SEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSY 86 (435)
Q Consensus 7 ~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 86 (435)
..|+++++|++|+|++|.+++..|..++++++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|+++++
T Consensus 43 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 122 (680)
T 1ziw_A 43 ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKN 122 (680)
T ss_dssp GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTT
T ss_pred HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCC
Confidence 45777777888888877777777777777778888888888777433335777778888888888777666667777788
Q ss_pred CCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 87 STYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 87 L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
|++|++++|.+++..|..++++++|++|++++|.+++..|.
T Consensus 123 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 123 LITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred CCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 88888888877777777777777788888877777665443
No 327
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.53 E-value=1.4e-13 Score=132.99 Aligned_cols=119 Identities=18% Similarity=0.142 Sum_probs=86.5
Q ss_pred CCcc-ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 5 IPSE-FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 5 lp~~-~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
+|.. +..+++|++|+|++|.+++..|..+..+++|++|+|++|.+++..|..++.+++|+.|+|++|.++...+..+++
T Consensus 60 l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 139 (390)
T 3o6n_A 60 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHN 139 (390)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcC
Confidence 5544 566777888888888877666667777888888888888877665666777778888888888777433333577
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+++|++|++++|.+++..|..++++++|+.|++++|.+++
T Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 140 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 7778888888887776666667777777777777777664
No 328
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.53 E-value=3.2e-14 Score=137.42 Aligned_cols=117 Identities=17% Similarity=0.179 Sum_probs=92.4
Q ss_pred CCCCCCeeecCCCcccccCCcc-cCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCE
Q 040641 11 DSLKLQGLYLGNNQLTGSIPRS-LGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTY 89 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~g~~p~~-~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 89 (435)
.+.+++.|++++|.++ .+|.. +..+++|++|+|++|.+++..|..+..+++|+.|+|++|.+++..|..++++++|++
T Consensus 43 ~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 4578888888888887 45544 678888888888888888666667888888888888888888777777888888888
Q ss_pred EeCCCCCCcccCCcc-ccCcCCCCcccccCCcceecCCccc
Q 040641 90 LDLHDNKFTREIPQN-LGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 90 L~l~~n~~~~~~p~~-~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
|++++|.++ .+|.. ++++++|++|++++|.+.+..|..+
T Consensus 122 L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 161 (390)
T 3o6n_A 122 LVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 161 (390)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred EECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhc
Confidence 888888887 45554 5788888888888888876555433
No 329
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.52 E-value=3.6e-14 Score=145.10 Aligned_cols=124 Identities=22% Similarity=0.191 Sum_probs=103.3
Q ss_pred CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcC-ccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTS-LGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
|..++.+++|+.|+|++|.+++..|..+..+++|+.|++++|.+.+..|+. +..+++|+.|++++|.+++..|..++.+
T Consensus 369 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 448 (606)
T 3t6q_A 369 NLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGL 448 (606)
T ss_dssp TTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTC
T ss_pred chhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCC
Confidence 667888889999999999988888888888999999999999988776654 8888889999999999888888888888
Q ss_pred CCCCEEeCCCCCCccc---CCccccCcCCCCcccccCCcceecCCccc
Q 040641 85 SYSTYLDLHDNKFTRE---IPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~---~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
++|++|++++|.+++. .+..+..+++|+.|++++|.+++..|..+
T Consensus 449 ~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 496 (606)
T 3t6q_A 449 PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAF 496 (606)
T ss_dssp TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTT
T ss_pred CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhh
Confidence 8999999999988762 33567888888899998888887766554
No 330
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.52 E-value=1.7e-14 Score=137.51 Aligned_cols=121 Identities=28% Similarity=0.289 Sum_probs=96.4
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.||..+. ++|+.|+|++|++++..+..+.++++|++|+|++|.+++..|..+..+++|++|+|++|.+++..+..+++
T Consensus 45 ~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 122 (353)
T 2z80_A 45 SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKP 122 (353)
T ss_dssp SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTT
T ss_pred ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCC
Confidence 3666554 48899999999998665668889999999999999998766778889999999999999998644445888
Q ss_pred CCCCCEEeCCCCCCcccCCc--cccCcCCCCcccccCCc-ceecCCc
Q 040641 84 LSYSTYLDLHDNKFTREIPQ--NLGNLAQLEHLDVLRNM-LCGKIPE 127 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~n~-l~g~~p~ 127 (435)
+++|++|++++|+++ .+|. .+.++++|+.|++++|. +.+..|.
T Consensus 123 l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 168 (353)
T 2z80_A 123 LSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRK 168 (353)
T ss_dssp CTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTT
T ss_pred CccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHH
Confidence 999999999999887 4555 68888999999999884 5443333
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.52 E-value=1.2e-14 Score=135.84 Aligned_cols=128 Identities=20% Similarity=0.129 Sum_probs=101.1
Q ss_pred CcccCCccc--cCCCCCCeeecCCCcccccCC----cccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccC
Q 040641 1 LTGSIPSEF--GDSLKLQGLYLGNNQLTGSIP----RSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFD 74 (435)
Q Consensus 1 l~g~lp~~~--~~l~~L~~L~l~~n~l~g~~p----~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~ 74 (435)
++|.+|..+ +.+++|+.|+|++|.+++..| ..+..+++|++|+|++|.+++..|..++.+++|++|||++|.+.
T Consensus 103 l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 182 (310)
T 4glp_A 103 ITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGL 182 (310)
T ss_dssp CBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTC
T ss_pred eccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCc
Confidence 456778877 889999999999999987666 34567889999999999998777788999999999999999886
Q ss_pred Cc--CC--CcCCCCCCCCEEeCCCCCCcccCCc----cccCcCCCCcccccCCcceecCCccc
Q 040641 75 GG--WP--RSLGNLSYSTYLDLHDNKFTREIPQ----NLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 75 ~~--~p--~~~~~l~~L~~L~l~~n~~~~~~p~----~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+. ++ ..++.+++|++|++++|+++ .+|. .++++++|++|++++|.+++..|..+
T Consensus 183 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 183 GERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp HHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC
T ss_pred cchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhH
Confidence 52 32 23467888899999999886 3333 24677888899999998888766544
No 332
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.52 E-value=6.8e-15 Score=146.20 Aligned_cols=115 Identities=22% Similarity=0.209 Sum_probs=97.1
Q ss_pred CCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCcc-CCCCCCeEECcCcccCCcCCCcCCCCCCCCE
Q 040641 11 DSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLG-NLKGLSHLDLSSNFFDGGWPRSLGNLSYSTY 89 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 89 (435)
.+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.+++. |. +..+++|++
T Consensus 118 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 195 (487)
T 3oja_A 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKT 195 (487)
T ss_dssp CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCE
T ss_pred ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCE
Confidence 467899999999999988888899999999999999999988888776 789999999999999865 43 346889999
Q ss_pred EeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 90 LDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 90 L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
|++++|.+++ +|..++.+++|+.|++++|.+++ +|..+
T Consensus 196 L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 196 LDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp EECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred EECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 9999999986 55668899999999999999986 55544
No 333
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.52 E-value=4.7e-14 Score=146.31 Aligned_cols=124 Identities=20% Similarity=0.166 Sum_probs=111.4
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.||..+. ++|+.|+|++|.+++..+..+.++++|++|+|++|.+++..|..++.+++|+.|+|++|.+++..+..|++
T Consensus 18 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 95 (680)
T 1ziw_A 18 QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF 95 (680)
T ss_dssp SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhcc
Confidence 4777665 68999999999999777778999999999999999999888888999999999999999999655557999
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+++|++|++++|++++..|..++++++|++|++++|.+++..|..+
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 141 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ 141 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSS
T ss_pred CCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhh
Confidence 9999999999999987777889999999999999999998777654
No 334
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.52 E-value=5.3e-14 Score=132.70 Aligned_cols=116 Identities=23% Similarity=0.274 Sum_probs=70.7
Q ss_pred cccCCCCCCeeecCCCccc--ccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLT--GSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~--g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
.+..+++|+.|+|++|.+. +..+..+..+++|+.|++++|.++ .+|..+. ++|+.|++++|.+++..|..+..++
T Consensus 140 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~ 216 (330)
T 1xku_A 140 VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLN 216 (330)
T ss_dssp HHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCT
T ss_pred HhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCC
Confidence 4566666677777766664 245556666666666666666665 3554433 5566666666666655555666666
Q ss_pred CCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 86 YSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 86 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
+|++|++++|.+++..+..+..+++|+.|++++|.++ .+|.
T Consensus 217 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 217 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp TCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred CCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 6666666666666555555666666666666666655 4444
No 335
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.51 E-value=3e-14 Score=143.03 Aligned_cols=124 Identities=31% Similarity=0.386 Sum_probs=111.7
Q ss_pred CcccCCccccCCCCCCeeecCCCcccc--cCCcccCCCCCCcEEECCCCcCccCCCcC-ccCCCCCCeEECcCcccCCcC
Q 040641 1 LTGSIPSEFGDSLKLQGLYLGNNQLTG--SIPRSLGQLGGLVKLNLTRNKFSGPVPTS-LGNLKGLSHLDLSSNFFDGGW 77 (435)
Q Consensus 1 l~g~lp~~~~~l~~L~~L~l~~n~l~g--~~p~~~~~l~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~ 77 (435)
+++.+|..++.+++|+.|+|++|++++ .+|..++.+++|++|+|++|.+++.+|.. +..+++|+.|++++|.+++.+
T Consensus 336 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 415 (520)
T 2z7x_B 336 LTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTI 415 (520)
T ss_dssp CCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGG
T ss_pred cChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcch
Confidence 356689999999999999999999996 67788999999999999999999868875 888999999999999999988
Q ss_pred CCcCCCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcc
Q 040641 78 PRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 78 p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~ 128 (435)
|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|.++ .+|..
T Consensus 416 ~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~ 462 (520)
T 2z7x_B 416 FRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDG 462 (520)
T ss_dssp GGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTT
T ss_pred hhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHH
Confidence 88765 78999999999998 89998889999999999999998 46654
No 336
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.51 E-value=2.6e-14 Score=151.72 Aligned_cols=126 Identities=25% Similarity=0.286 Sum_probs=111.8
Q ss_pred ccC-CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcC--ccCCCCCCeEECcCcccCCcCC-
Q 040641 3 GSI-PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTS--LGNLKGLSHLDLSSNFFDGGWP- 78 (435)
Q Consensus 3 g~l-p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p- 78 (435)
+.| |..|+++++|++|+|++|.+++..|..++++++|++|+|++|.+++.+|.. ++.+++|++|||++|.+++..|
T Consensus 62 ~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 141 (844)
T 3j0a_A 62 LTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH 141 (844)
T ss_dssp CEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCC
T ss_pred cccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccc
Confidence 456 678999999999999999999888999999999999999999999877765 9999999999999999987655
Q ss_pred CcCCCCCCCCEEeCCCCCCcccCCccccCc--CCCCcccccCCcceecCCcc
Q 040641 79 RSLGNLSYSTYLDLHDNKFTREIPQNLGNL--AQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 79 ~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l--~~L~~l~l~~n~l~g~~p~~ 128 (435)
..|+++++|++|++++|.+++..|..++.+ ++|+.|+++.|.+.+..|..
T Consensus 142 ~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~ 193 (844)
T 3j0a_A 142 PSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVD 193 (844)
T ss_dssp GGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCC
T ss_pred hhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccc
Confidence 578999999999999999998888888777 78888888888887766654
No 337
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=9.1e-14 Score=118.27 Aligned_cols=98 Identities=27% Similarity=0.312 Sum_probs=85.4
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCC
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 82 (435)
+.||..+. ++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.|++..+..|.
T Consensus 25 ~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 102 (174)
T 2r9u_A 25 ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFD 102 (174)
T ss_dssp SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhc
Confidence 46787775 8999999999999988899999999999999999999964444578999999999999999976555699
Q ss_pred CCCCCCEEeCCCCCCcccCCc
Q 040641 83 NLSYSTYLDLHDNKFTREIPQ 103 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~ 103 (435)
.+++|++|++++|.+.. .+.
T Consensus 103 ~l~~L~~L~L~~N~~~c-~~~ 122 (174)
T 2r9u_A 103 NLKSLTHIYLYNNPWDC-ECR 122 (174)
T ss_dssp TCTTCSEEECCSSCBCT-TBG
T ss_pred cccCCCEEEeCCCCccc-ccc
Confidence 99999999999999974 444
No 338
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.51 E-value=2.9e-14 Score=143.85 Aligned_cols=108 Identities=22% Similarity=0.247 Sum_probs=96.4
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcC-CCcCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGW-PRSLGN 83 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~ 83 (435)
||. ++.+++|+.|+|++|+|+ .+|..++++++|+.|+|++|.+++ +| .++.+++|+.|+|++|.|++.. |..++.
T Consensus 456 lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~ 531 (567)
T 1dce_A 456 LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVS 531 (567)
T ss_dssp CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGG
T ss_pred CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhc
Confidence 786 999999999999999999 899999999999999999999996 77 8999999999999999999876 999999
Q ss_pred CCCCCEEeCCCCCCcccCCcc---ccCcCCCCcccc
Q 040641 84 LSYSTYLDLHDNKFTREIPQN---LGNLAQLEHLDV 116 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~---~~~l~~L~~l~l 116 (435)
+++|++|++++|.+++..|.. +..+++|+.|++
T Consensus 532 l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 532 CPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999999999999998755432 233678887753
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.51 E-value=1e-14 Score=136.35 Aligned_cols=111 Identities=18% Similarity=0.125 Sum_probs=93.5
Q ss_pred CCCCCeeecCCCcccccCCccc--CCCCCCcEEECCCCcCccCCC----cCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 12 SLKLQGLYLGNNQLTGSIPRSL--GQLGGLVKLNLTRNKFSGPVP----TSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 12 l~~L~~L~l~~n~l~g~~p~~~--~~l~~L~~L~ls~n~l~~~~p----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
+++|+.|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|+.|+|++|.+++..|..++.++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4679999999999999999888 899999999999999987665 3455788999999999999888888899999
Q ss_pred CCCEEeCCCCCCccc--C--CccccCcCCCCcccccCCcce
Q 040641 86 YSTYLDLHDNKFTRE--I--PQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 86 ~L~~L~l~~n~~~~~--~--p~~~~~l~~L~~l~l~~n~l~ 122 (435)
+|++|++++|++.+. + +..++++++|++|++++|.++
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 210 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME 210 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC
Confidence 999999999987653 2 233468889999999999886
No 340
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.50 E-value=9.6e-14 Score=132.21 Aligned_cols=121 Identities=25% Similarity=0.347 Sum_probs=92.7
Q ss_pred ccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcC-ccCCCCCCeEECcCcccCCcCCC--cCCC
Q 040641 7 SEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTS-LGNLKGLSHLDLSSNFFDGGWPR--SLGN 83 (435)
Q Consensus 7 ~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~--~~~~ 83 (435)
..+.++++|+.|+|++|++++..|..+.++++|++|+|++|++++ +|.. ++.+++|++|+|++|.+++ +|. .+..
T Consensus 70 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~ 147 (353)
T 2z80_A 70 SDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSH 147 (353)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTT
T ss_pred HHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCcc-cCchhhhcc
Confidence 367888888888888888887667778888888888888888874 4544 7788888888888888874 554 6778
Q ss_pred CCCCCEEeCCCCC-CcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 84 LSYSTYLDLHDNK-FTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 84 l~~L~~L~l~~n~-~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+++|++|++++|+ ++...|..++++++|+.|++++|.+.+..|..+
T Consensus 148 l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 194 (353)
T 2z80_A 148 LTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSL 194 (353)
T ss_dssp CTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred CCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHH
Confidence 8888888888884 555556677888888888888888877666544
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.50 E-value=2.5e-14 Score=128.49 Aligned_cols=108 Identities=16% Similarity=0.252 Sum_probs=64.8
Q ss_pred CCCeeecCCCcccccCCcccCCCCCCcEEECCCCc-CccCCCcCccCCCCCCeEECcC-cccCCcCCCcCCCCCCCCEEe
Q 040641 14 KLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNK-FSGPVPTSLGNLKGLSHLDLSS-NFFDGGWPRSLGNLSYSTYLD 91 (435)
Q Consensus 14 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~-l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~ 91 (435)
+|+.|+|++|++++..+..+.++++|++|++++|. +++..+..|..+++|+.|++++ |.+++..|..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666664444456666666666666665 5533333566666666666666 666644445566666666666
Q ss_pred CCCCCCcccCCccccCcCCCC---cccccCC-ccee
Q 040641 92 LHDNKFTREIPQNLGNLAQLE---HLDVLRN-MLCG 123 (435)
Q Consensus 92 l~~n~~~~~~p~~~~~l~~L~---~l~l~~n-~l~g 123 (435)
+++|.+++ +|. +..+++|+ .|++++| .+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~ 145 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS 145 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhh
Confidence 66666654 554 55566665 6666666 5554
No 342
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.50 E-value=8.2e-14 Score=137.28 Aligned_cols=122 Identities=20% Similarity=0.122 Sum_probs=104.2
Q ss_pred cccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcC
Q 040641 2 TGSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSL 81 (435)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~ 81 (435)
++-.|..|.++++|+.|+|++|++++..|..+.++++|++|+|++|.+++..+..+..+++|+.|+|++|.++...+..|
T Consensus 88 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 167 (452)
T 3zyi_A 88 QMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAF 167 (452)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTT
T ss_pred ceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHH
Confidence 34457789999999999999999998888999999999999999999996556669999999999999999997666688
Q ss_pred CCCCCCCEEeCCCCCCcccCCc-cccCcCCCCcccccCCccee
Q 040641 82 GNLSYSTYLDLHDNKFTREIPQ-NLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 82 ~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~l~l~~n~l~g 123 (435)
.++++|++|++++|+..+.+|. .+.++++|+.|++++|.+++
T Consensus 168 ~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 168 NRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp TTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred hcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 8899999999998655555655 57888889999999988874
No 343
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=1.2e-13 Score=117.05 Aligned_cols=96 Identities=26% Similarity=0.299 Sum_probs=85.3
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.+|..+. ++|+.|+|++|+|++..|..+.++++|++|+|++|++++..|..|..+++|+.|+|++|.|++..|..|..
T Consensus 23 ~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 100 (170)
T 3g39_A 23 SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDN 100 (170)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcC
Confidence 4777664 78999999999999888999999999999999999999655556899999999999999999766667999
Q ss_pred CCCCCEEeCCCCCCcccC
Q 040641 84 LSYSTYLDLHDNKFTREI 101 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~ 101 (435)
+++|++|++++|.++...
T Consensus 101 l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 101 LKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CTTCCEEECCSSCBCTTB
T ss_pred CCCCCEEEeCCCCCCCCc
Confidence 999999999999997543
No 344
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.50 E-value=7.5e-14 Score=141.47 Aligned_cols=124 Identities=27% Similarity=0.371 Sum_probs=109.8
Q ss_pred CcccCCccccCCCCCCeeecCCCcccc--cCCcccCCCCCCcEEECCCCcCccCCCcC-ccCCCCCCeEECcCcccCCcC
Q 040641 1 LTGSIPSEFGDSLKLQGLYLGNNQLTG--SIPRSLGQLGGLVKLNLTRNKFSGPVPTS-LGNLKGLSHLDLSSNFFDGGW 77 (435)
Q Consensus 1 l~g~lp~~~~~l~~L~~L~l~~n~l~g--~~p~~~~~l~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~ 77 (435)
+++.+|..++.+++|+.|+|++|++++ .+|..+.++++|+.|+|++|.+++.+|.. +..+++|+.|++++|.+++.+
T Consensus 365 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 444 (562)
T 3a79_B 365 FTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444 (562)
T ss_dssp CCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG
T ss_pred cccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch
Confidence 356688999999999999999999996 34578999999999999999999867765 888999999999999999888
Q ss_pred CCcCCCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCcc
Q 040641 78 PRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 78 p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~ 128 (435)
|..+. ++|++|++++|+++ .+|..+.++++|+.|++++|.++ .+|..
T Consensus 445 ~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~ 491 (562)
T 3a79_B 445 FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDG 491 (562)
T ss_dssp GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTT
T ss_pred hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHH
Confidence 87765 78999999999997 79998889999999999999998 56654
No 345
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.50 E-value=2.6e-13 Score=128.06 Aligned_cols=114 Identities=25% Similarity=0.271 Sum_probs=90.4
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.+|..+. ++|+.|+|++|.+++..|..+.++++|++|+|++|.+++..|..++.+++|++|+|++|.++ .+|..+.
T Consensus 47 ~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~- 122 (332)
T 2ft3_A 47 AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP- 122 (332)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC-
T ss_pred ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc-
Confidence 3666553 57888888888888666778888888888888888888766778888888888888888887 5776665
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcce
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
++|++|++++|++++..+..+.++++|+.|++++|.++
T Consensus 123 -~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 123 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp -TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred -ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccc
Confidence 78888888888887655556788888888888888875
No 346
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.49 E-value=3.3e-13 Score=115.14 Aligned_cols=109 Identities=25% Similarity=0.247 Sum_probs=95.1
Q ss_pred CCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCC
Q 040641 14 KLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLH 93 (435)
Q Consensus 14 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 93 (435)
..+.+++++|+++ .+|..+. ++|+.|++++|++++..+..++.+++|+.|+|++|.+++..+..++.+++|++|+++
T Consensus 8 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 4678999999998 7886654 799999999999996555668999999999999999997666678999999999999
Q ss_pred CCCCcccCCccccCcCCCCcccccCCcceecC
Q 040641 94 DNKFTREIPQNLGNLAQLEHLDVLRNMLCGKI 125 (435)
Q Consensus 94 ~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~ 125 (435)
+|++++..+..+.++++|+.|++++|.+++..
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 116 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVP 116 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeC
Confidence 99999766667899999999999999998543
No 347
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.49 E-value=2.6e-13 Score=128.07 Aligned_cols=121 Identities=20% Similarity=0.247 Sum_probs=87.0
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
.|..|+++++|+.|+|++|++++..|..++++++|++|+|++|.++ .+|..+. ++|+.|++++|.+++..+..+..+
T Consensus 70 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l 146 (332)
T 2ft3_A 70 RKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGL 146 (332)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSC
T ss_pred CHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCC
Confidence 3567888999999999999998777888999999999999999887 6776654 677888888887775555557777
Q ss_pred CCCCEEeCCCCCCc--ccCCccccCc--------------------CCCCcccccCCcceecCCcc
Q 040641 85 SYSTYLDLHDNKFT--REIPQNLGNL--------------------AQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 85 ~~L~~L~l~~n~~~--~~~p~~~~~l--------------------~~L~~l~l~~n~l~g~~p~~ 128 (435)
++|++|++++|.++ +..|..+..+ ++|+.|++++|.+++..|..
T Consensus 147 ~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~ 212 (332)
T 2ft3_A 147 RNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELED 212 (332)
T ss_dssp SSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTS
T ss_pred ccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHH
Confidence 77777777777764 2344444333 35566666666666544443
No 348
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=135.28 Aligned_cols=120 Identities=22% Similarity=0.149 Sum_probs=74.4
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
||..+. ++++.|+|++|++++..+..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..+..|..+
T Consensus 58 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 135 (440)
T 3zyj_A 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL 135 (440)
T ss_dssp CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSC
T ss_pred CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhcc
Confidence 454443 456666666666665555666666666666666666665444566666666666666666665444456666
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|++|++++|.++...+..+.++++|+.|++++|+..+.+|
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~ 177 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS 177 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeC
Confidence 666666666666665444456666666666666644333333
No 349
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.47 E-value=7.3e-14 Score=125.39 Aligned_cols=120 Identities=16% Similarity=0.222 Sum_probs=104.4
Q ss_pred CccccCCCCCCeeecCCCc-ccccCCcccCCCCCCcEEECCC-CcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQ-LTGSIPRSLGQLGGLVKLNLTR-NKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~-l~g~~p~~~~~l~~L~~L~ls~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
+..|.++++|+.|+|++|. +++..+..+.++++|++|+|++ |.+++..+..|..+++|+.|++++|.+++ +|. ++.
T Consensus 48 ~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~ 125 (239)
T 2xwt_C 48 SHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTK 125 (239)
T ss_dssp TTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTT
T ss_pred HHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccc
Confidence 3478999999999999997 8855556899999999999998 99996556689999999999999999986 786 888
Q ss_pred CCCCC---EEeCCCC-CCcccCCccccCcCCCC-cccccCCcceecCCcc
Q 040641 84 LSYST---YLDLHDN-KFTREIPQNLGNLAQLE-HLDVLRNMLCGKIPEK 128 (435)
Q Consensus 84 l~~L~---~L~l~~n-~~~~~~p~~~~~l~~L~-~l~l~~n~l~g~~p~~ 128 (435)
+++|+ +|++++| .+++..+..+.++++|+ .|++++|.++ .+|..
T Consensus 126 l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 126 VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp CCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred ccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 99998 9999999 89866666799999999 9999999988 56653
No 350
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=7.3e-14 Score=119.16 Aligned_cols=114 Identities=20% Similarity=0.193 Sum_probs=96.6
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCC-CCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLG-GLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSY 86 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~-~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 86 (435)
.+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|.+++. +.++.+++|+.|+|++|.+++..|..++.+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4677889999999999999 5664 55555 999999999999964 68999999999999999999644444589999
Q ss_pred CCEEeCCCCCCcccCCc--cccCcCCCCcccccCCcceecCCc
Q 040641 87 STYLDLHDNKFTREIPQ--NLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 87 L~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
|++|++++|.++ .+|. .++.+++|+.|++++|.++ .+|.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~ 130 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKH 130 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTT
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHh
Confidence 999999999995 6776 7899999999999999987 3443
No 351
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.47 E-value=1.8e-13 Score=134.33 Aligned_cols=123 Identities=21% Similarity=0.164 Sum_probs=106.4
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCC
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 82 (435)
+-.|..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.++...+..|.
T Consensus 78 ~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 157 (440)
T 3zyj_A 78 IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFN 157 (440)
T ss_dssp EECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTT
T ss_pred eeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhh
Confidence 33457899999999999999999987778999999999999999999965555799999999999999999976677899
Q ss_pred CCCCCCEEeCCCCCCcccCCc-cccCcCCCCcccccCCcceecCC
Q 040641 83 NLSYSTYLDLHDNKFTREIPQ-NLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++++|++|++++|+..+.+|. .+.++++|+.|++++|.++ .+|
T Consensus 158 ~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~ 201 (440)
T 3zyj_A 158 RIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP 201 (440)
T ss_dssp TCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC
T ss_pred hCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc
Confidence 999999999999665556655 6889999999999999987 444
No 352
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=2.2e-16 Score=137.71 Aligned_cols=122 Identities=26% Similarity=0.260 Sum_probs=100.7
Q ss_pred CcccCCc------cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccC
Q 040641 1 LTGSIPS------EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFD 74 (435)
Q Consensus 1 l~g~lp~------~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~ 74 (435)
|+|.+|. .++.+++|+.|+|++|.+++ +| .+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.++
T Consensus 30 l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~ 106 (198)
T 1ds9_A 30 LHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA 106 (198)
T ss_dssp CCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECC
T ss_pred eccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCC
Confidence 4566666 88889999999999999985 77 8888999999999999998 68887777888999999999998
Q ss_pred CcCCCcCCCCCCCCEEeCCCCCCcccCC-ccccCcCCCCcccccCCcceecCCc
Q 040641 75 GGWPRSLGNLSYSTYLDLHDNKFTREIP-QNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 75 ~~~p~~~~~l~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
+ +| .++.+++|++|++++|++++..+ ..+..+++|+.|++++|.+.+.+|.
T Consensus 107 ~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 107 S-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp C-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred c-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 6 56 67888899999999999874222 4678889999999999988876554
No 353
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=6.5e-14 Score=119.49 Aligned_cols=112 Identities=21% Similarity=0.266 Sum_probs=97.3
Q ss_pred CCccccCCC-CCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcC-ccCCCCCCeEECcCcccCCcCCC--c
Q 040641 5 IPSEFGDSL-KLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTS-LGNLKGLSHLDLSSNFFDGGWPR--S 80 (435)
Q Consensus 5 lp~~~~~l~-~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~--~ 80 (435)
+| .+..+. +|+.|+|++|.+++. ..+..+++|++|+|++|.+++ +|+. +..+++|+.|+|++|.++ .+|. .
T Consensus 34 i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~ 108 (176)
T 1a9n_A 34 IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTELILTNNSLV-ELGDLDP 108 (176)
T ss_dssp CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEEECCSCCCC-CGGGGGG
T ss_pred hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCEEECCCCcCC-cchhhHh
Confidence 44 355655 999999999999964 689999999999999999995 5655 599999999999999996 5776 8
Q ss_pred CCCCCCCCEEeCCCCCCcccCCcc----ccCcCCCCcccccCCcce
Q 040641 81 LGNLSYSTYLDLHDNKFTREIPQN----LGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 81 ~~~l~~L~~L~l~~n~~~~~~p~~----~~~l~~L~~l~l~~n~l~ 122 (435)
+..+++|++|++++|.++ .+|.. ++.+++|+.||++.|...
T Consensus 109 l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 109 LASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp GGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred hhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 899999999999999997 67775 889999999999999764
No 354
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.46 E-value=3.2e-13 Score=127.27 Aligned_cols=113 Identities=26% Similarity=0.279 Sum_probs=96.3
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
+|..+. +.|+.|+|++|.+++..+..+.++++|++|+|++|.+++..|..++.+++|+.|+|++|.++ .+|..+.
T Consensus 46 lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-- 120 (330)
T 1xku_A 46 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP-- 120 (330)
T ss_dssp CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--
T ss_pred cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--
Confidence 565554 57899999999999766678999999999999999999777888999999999999999988 5777665
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcce
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
++|++|++++|.+++..+..+.++++|+.|++++|.+.
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 158 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLK 158 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCC
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCC
Confidence 78999999999998766677888999999999999875
No 355
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.44 E-value=2.6e-13 Score=128.83 Aligned_cols=105 Identities=19% Similarity=0.140 Sum_probs=76.3
Q ss_pred CeeecCCC-cccccCCcccCCCCCCcEEECCC-CcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCC
Q 040641 16 QGLYLGNN-QLTGSIPRSLGQLGGLVKLNLTR-NKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLH 93 (435)
Q Consensus 16 ~~L~l~~n-~l~g~~p~~~~~l~~L~~L~ls~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 93 (435)
..++++++ +|+ .+|. +..+++|+.|+|++ |.|++..|..|+.+++|+.|+|++|.|++..|..|++|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35677777 777 5777 77788888888875 78876555677788888888888888887777777788888888888
Q ss_pred CCCCcccCCccccCcCCCCcccccCCccee
Q 040641 94 DNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 94 ~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+|+|++..|..+..+. |+.|++.+|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8888754444444444 7888888887754
No 356
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.43 E-value=7.9e-14 Score=130.75 Aligned_cols=113 Identities=22% Similarity=0.205 Sum_probs=80.2
Q ss_pred CCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCc-cCCCCCCeEECcCcccCCcCCCcCCCCCCCCEE
Q 040641 12 SLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSL-GNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYL 90 (435)
Q Consensus 12 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~-~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 90 (435)
+++|+.|+|++|++++..|..++.+++|+.|+|++|.+++..|..+ ..+++|+.|+|++|.+++. |. ...+++|++|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 5667788888888876666677777888888888888776555555 3677788888888877743 33 2347777888
Q ss_pred eCCCCCCcccCCccccCcCCCCcccccCCcceecCCcc
Q 040641 91 DLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEK 128 (435)
Q Consensus 91 ~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~ 128 (435)
++++|++++ +|..+..+++|+.|++++|.+++ +|..
T Consensus 197 ~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~ 232 (317)
T 3o53_A 197 DLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKA 232 (317)
T ss_dssp ECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTT
T ss_pred ECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhH
Confidence 888887764 55557777778888888877773 4543
No 357
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.43 E-value=1e-12 Score=122.52 Aligned_cols=108 Identities=28% Similarity=0.351 Sum_probs=69.8
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.+..+++|+.|+|++|.+++ ++. +..+++|++|+|++|.+++ +| .+..+++|+.|++++|.+++ +|. +..+++|
T Consensus 58 ~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L 131 (308)
T 1h6u_A 58 GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNL 131 (308)
T ss_dssp TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTC
T ss_pred hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCC
Confidence 46667777777777777763 443 6777777777777777764 33 56667777777777777664 332 6666666
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
++|++++|.+++ ++. ++.+++|+.|++++|.+++
T Consensus 132 ~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 132 QVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCC
T ss_pred CEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCC
Confidence 666666666654 332 5566666666666666654
No 358
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.42 E-value=2.9e-13 Score=136.09 Aligned_cols=105 Identities=27% Similarity=0.395 Sum_probs=49.7
Q ss_pred CCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC----
Q 040641 12 SLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS---- 87 (435)
Q Consensus 12 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L---- 87 (435)
+++|+.|+|++|+|++ +|. .+++|+.|+|++|.+++ +|. +. ++|+.|+|++|.|+ .+|. +.. +|
T Consensus 139 l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~ 206 (571)
T 3cvr_A 139 PALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSE 206 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------
T ss_pred CccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhccc
Confidence 3444444444444442 333 33444455555554443 444 33 44555555555554 3444 332 44
Q ss_pred ---CEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 88 ---TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 88 ---~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+.|++++|+++ .+|..+.++++|+.|++++|.+++.+|..+
T Consensus 207 ~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 207 ETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESL 250 (571)
T ss_dssp -CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHH
T ss_pred ccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHH
Confidence 55555555554 355555555555555555555555555433
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.40 E-value=8.1e-13 Score=122.20 Aligned_cols=111 Identities=31% Similarity=0.343 Sum_probs=88.3
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.+..+++|+.|+|++|++++ ++. +..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|.+++ + ..+..+++|
T Consensus 63 ~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L 136 (291)
T 1h6t_A 63 GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQL 136 (291)
T ss_dssp TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTC
T ss_pred hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCC
Confidence 37788889999999999885 444 8888899999999998875 44 48888888889988888875 3 467788888
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|++++|++++. ..++.+++|+.|++++|.+++..|
T Consensus 137 ~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 137 ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 8888888888753 567888888888888888876443
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.40 E-value=1.1e-12 Score=133.08 Aligned_cols=111 Identities=31% Similarity=0.345 Sum_probs=80.1
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.+..+++|+.|+|++|++++..| +..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|.+++ + ..+..+++|
T Consensus 60 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L 133 (605)
T 1m9s_A 60 GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQL 133 (605)
T ss_dssp TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTC
T ss_pred HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCcc
Confidence 47777888888888888875433 7778888888888888774 33 67777778888888887774 3 346777777
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+.|+|++|.+++. ..++.+++|+.|+|++|.+.+..|
T Consensus 134 ~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 134 ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 7777777777653 456777777777777777776544
No 361
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=7e-13 Score=125.90 Aligned_cols=94 Identities=26% Similarity=0.264 Sum_probs=84.1
Q ss_pred cCCccccCCCCCCeeecCC-CcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCC
Q 040641 4 SIPSEFGDSLKLQGLYLGN-NQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~-n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 82 (435)
.||. |+.+++|+.|+|++ |+|++..|..|+++++|+.|+|++|+|++..|..|..+++|+.|||++|.|++..|..+.
T Consensus 23 ~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 101 (347)
T 2ifg_A 23 SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ 101 (347)
T ss_dssp TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTC
T ss_pred ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcc
Confidence 3898 99999999999996 999977778999999999999999999998888899999999999999999965555555
Q ss_pred CCCCCCEEeCCCCCCcc
Q 040641 83 NLSYSTYLDLHDNKFTR 99 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~ 99 (435)
.++ |+.|+|.+|.+..
T Consensus 102 ~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 102 GLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCC-CCEEECCSSCCCC
T ss_pred cCC-ceEEEeeCCCccC
Confidence 555 9999999999874
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.40 E-value=1.3e-12 Score=118.99 Aligned_cols=105 Identities=22% Similarity=0.262 Sum_probs=51.0
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYST 88 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 88 (435)
+..+++|+.|++++|.++ .+| .+..+++|+.|+|++|++++ +|+ +..+++|+.|+|++|.+++ +|.... ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCC
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcccc--Cccc
Confidence 444555555555555554 344 45555555555555555553 332 5555555555555555543 332211 4455
Q ss_pred EEeCCCCCCcccCCccccCcCCCCcccccCCcce
Q 040641 89 YLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 89 ~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
+|++++|++++ +| .++++++|+.|++++|.++
T Consensus 110 ~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 110 RLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp EEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCC
T ss_pred EEEccCCccCC-Ch-hhcCcccccEEECCCCcCC
Confidence 55555555543 22 2444555555555555444
No 363
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.39 E-value=3.3e-13 Score=126.47 Aligned_cols=113 Identities=22% Similarity=0.191 Sum_probs=66.2
Q ss_pred CCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccC-----------------
Q 040641 12 SLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFD----------------- 74 (435)
Q Consensus 12 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~----------------- 74 (435)
+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.++
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~ 110 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNN 110 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSC
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCc
Confidence 3345555555555554444455555555555555555543222 444445555555444443
Q ss_pred --CcCCCcCCCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 75 --GGWPRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 75 --~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+..+. .+++|++|++++|++++..|..++.+++|+.|++++|.+++..|..+
T Consensus 111 l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 111 ISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp CSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred cCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHH
Confidence 32222 25667888888888877667777788888888888888876655443
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.39 E-value=1e-12 Score=121.47 Aligned_cols=107 Identities=28% Similarity=0.339 Sum_probs=70.8
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYST 88 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 88 (435)
+..+++|+.|++++|.+. .+| .+..+++|+.|+|++|++++ +++ +..+++|+.|+|++|.+++ +| .++.+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 345666777777777776 344 36667777777777777764 333 6677777777777777764 33 366777777
Q ss_pred EEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 89 YLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 89 ~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+|++++|++++ + ..+..+++|+.|++++|.+++
T Consensus 116 ~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~ 148 (291)
T 1h6t_A 116 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD 148 (291)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC
T ss_pred EEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCc
Confidence 77777777754 3 346667777777777776664
No 365
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.38 E-value=3.3e-13 Score=132.78 Aligned_cols=117 Identities=21% Similarity=0.285 Sum_probs=67.1
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCcccCCCCCC-------------cEEECCCCcCccCCCcCc------------
Q 040641 3 GSIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGL-------------VKLNLTRNKFSGPVPTSL------------ 57 (435)
Q Consensus 3 g~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L-------------~~L~ls~n~l~~~~p~~~------------ 57 (435)
|+||++++++++|+.|++++|.++|.+|.+++++++| +.|++++|.+++ +|...
T Consensus 24 ~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~~~~L~~L~l~~n~ 102 (454)
T 1jl5_A 24 TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPELPPHLESLVASCNS 102 (454)
T ss_dssp ----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSCCTTCSEEECCSSC
T ss_pred hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCCcCCCCEEEccCCc
Confidence 6678778888888888888888877788777776543 555555555553 33211
Q ss_pred -----cCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCc
Q 040641 58 -----GNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 58 -----~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
..+++|+.|++++|.+++ +|.. .++|++|++++|++++ +| .++++++|++|++++|.+++ +|.
T Consensus 103 l~~lp~~~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~ 170 (454)
T 1jl5_A 103 LTELPELPQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPD 170 (454)
T ss_dssp CSSCCCCCTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCC
T ss_pred CCccccccCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCC
Confidence 011344444444444442 2211 1577888888888875 77 58888888888888888875 554
No 366
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.38 E-value=1.6e-12 Score=121.32 Aligned_cols=111 Identities=24% Similarity=0.369 Sum_probs=88.7
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
+|+ +..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|.+++ +|. +..+++|+.|++++|.+++..+ ++.+
T Consensus 78 ~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l 150 (308)
T 1h6u_A 78 LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGL 150 (308)
T ss_dssp CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGC
T ss_pred Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCC
Confidence 444 8888899999999999884 44 68888999999999998885 443 8888889999999888875433 7788
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceec
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~ 124 (435)
++|++|++++|.+++ ++. +.++++|+.|++++|.+++.
T Consensus 151 ~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 151 TNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC
T ss_pred CCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcC
Confidence 888888888888875 444 77888888888888888754
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.37 E-value=1.6e-12 Score=132.04 Aligned_cols=110 Identities=28% Similarity=0.391 Sum_probs=93.1
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
+|+ ++.+++|+.|+|++|.+++ +| .+..+++|+.|+|++|.+++ + +.+..|++|+.|+|++|.+++. ..++.+
T Consensus 80 ~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l 152 (605)
T 1m9s_A 80 IKP-LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRL 152 (605)
T ss_dssp CGG-GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSC
T ss_pred Chh-hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhccc
Confidence 444 8889999999999999984 44 78899999999999999985 4 4688899999999999999864 578889
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
++|+.|+|++|.+++..| +..+++|+.|+|++|.+++
T Consensus 153 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 153 TKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 999999999999987655 8889999999999998875
No 368
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.36 E-value=3.1e-12 Score=128.55 Aligned_cols=101 Identities=28% Similarity=0.401 Sum_probs=54.0
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNL 84 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 84 (435)
||..+. ++|+.|+|++|+|+ .+| ..+++|+.|+|++|++++ +|. +.. +|+.|+|++|.|++ +|. .+
T Consensus 74 lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l 139 (571)
T 3cvr_A 74 LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LP 139 (571)
T ss_dssp CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CC
T ss_pred cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cC
Confidence 454442 45566666666655 455 334556666666666654 554 433 55555555555554 444 34
Q ss_pred CCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 85 SYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 85 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
++|++|++++|++++ +|. .+++|+.|++++|.+++
T Consensus 140 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 140 ALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred ccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 555555555555553 444 34455555555555554
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.36 E-value=2.2e-12 Score=117.47 Aligned_cols=111 Identities=29% Similarity=0.328 Sum_probs=95.1
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.+| .++.+++|+.|+|++|++++ +|. +..+++|+.|+|++|++++ +|.... ++|+.|+|++|.+++ +| .++.
T Consensus 55 ~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~ 126 (263)
T 1xeu_A 55 SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIH 126 (263)
T ss_dssp CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTT
T ss_pred cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcC
Confidence 355 68899999999999999995 554 9999999999999999985 665433 889999999999986 44 5889
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcceec
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~ 124 (435)
+++|++|++++|++++ +| .++.+++|+.|++++|.+++.
T Consensus 127 l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 127 LKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC
T ss_pred cccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch
Confidence 9999999999999985 55 688999999999999998864
No 370
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.34 E-value=1.9e-12 Score=122.82 Aligned_cols=112 Identities=28% Similarity=0.392 Sum_probs=100.2
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYST 88 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 88 (435)
+..+++|+.|+|++|.+++ +|. +..+++|+.|++++|.+++ + +.+..+++|+.|++++|.+++ +| .+..+++|+
T Consensus 217 ~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~ 290 (347)
T 4fmz_A 217 VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLN 290 (347)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCS
T ss_pred hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCC
Confidence 7889999999999999985 554 8999999999999999985 4 478999999999999999986 44 588999999
Q ss_pred EEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 89 YLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 89 ~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+|++++|.+++..|..++++++|+.|++++|.+++..|
T Consensus 291 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 291 SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp EEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred EEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 99999999998888889999999999999999987655
No 371
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.33 E-value=3.2e-12 Score=125.84 Aligned_cols=107 Identities=26% Similarity=0.306 Sum_probs=68.6
Q ss_pred CccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
+.+++++++|+.|+|++|.+++ +| .++.+++|++|+|++|++++ +| ++.+++|++|++++|.+++ +| ++.++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~ 106 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLT 106 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCT
T ss_pred ccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCC
Confidence 3456666677777777777664 34 56666777777777777664 33 6666667777777766665 33 66666
Q ss_pred CCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 86 YSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 86 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+|++|++++|++++ +| ++++++|+.|++++|.+++
T Consensus 107 ~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 107 KLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp TCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred cCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 66666666666654 43 5666666666666666655
No 372
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.31 E-value=5e-12 Score=124.99 Aligned_cols=108 Identities=31% Similarity=0.441 Sum_probs=70.4
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++ +|+ +..+++|+.|++++|.+++..| ++.+++|
T Consensus 238 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 311 (466)
T 1o6v_A 238 TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP--ISNLKNL 311 (466)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTC
T ss_pred hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh--hcCCCCC
Confidence 46667777777777777765433 6677777777777777764 333 6666777777777777765333 5666677
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
++|++++|++++..| +..+++|+.|++++|.+++
T Consensus 312 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 312 TYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 777777777665444 5566666666666666654
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.31 E-value=9.7e-12 Score=122.92 Aligned_cols=110 Identities=33% Similarity=0.451 Sum_probs=86.2
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYST 88 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 88 (435)
++.+++|+.|++++|++++ + +.+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++..| +..+++|+
T Consensus 217 ~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 290 (466)
T 1o6v_A 217 LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 290 (466)
T ss_dssp GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccC
Confidence 6778888888888888874 4 367788888888888888886443 7788888888888888886443 77888888
Q ss_pred EEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 89 YLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 89 ~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+|++++|++++..| ++.+++|+.|++++|.+++..|
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 88888888876433 6788888888888888877654
No 374
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.31 E-value=4.3e-12 Score=120.37 Aligned_cols=113 Identities=26% Similarity=0.329 Sum_probs=98.1
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYST 88 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 88 (435)
+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++ +|. +..+++|+.|++++|.+++ + ..+..+++|+
T Consensus 195 ~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~ 268 (347)
T 4fmz_A 195 LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLK 268 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCC
T ss_pred ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcC
Confidence 7889999999999999985444 8899999999999999985 454 8999999999999999986 4 4688999999
Q ss_pred EEeCCCCCCcccCCccccCcCCCCcccccCCcceecCCccc
Q 040641 89 YLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIPEKI 129 (435)
Q Consensus 89 ~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p~~~ 129 (435)
+|++++|.+++ + ..+..+++|+.|++++|.+++..|..+
T Consensus 269 ~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 269 MLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp EEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred EEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 99999999975 4 458899999999999999987666544
No 375
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.28 E-value=1.7e-11 Score=120.56 Aligned_cols=107 Identities=23% Similarity=0.193 Sum_probs=86.7
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYST 88 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 88 (435)
++.+++|+.|++++|...+.+ .++.+++|+.|++++|++++ +| ++.+++|+.|++++|.+++. .++.+++|+
T Consensus 144 l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~ 215 (457)
T 3bz5_A 144 VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLT 215 (457)
T ss_dssp CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCS
T ss_pred cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCC
Confidence 778888888888888666666 47788888888888888886 55 77888888888888888864 377888888
Q ss_pred EEeCCCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 89 YLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 89 ~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
+|++++|++++ +| ++.+++|+.|++++|.+++..+
T Consensus 216 ~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 216 FLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp EEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC
T ss_pred EEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH
Confidence 88888888876 66 7788888888888888887543
No 376
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.27 E-value=2.2e-11 Score=119.78 Aligned_cols=101 Identities=25% Similarity=0.357 Sum_probs=62.1
Q ss_pred CCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeC
Q 040641 13 LKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDL 92 (435)
Q Consensus 13 ~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 92 (435)
++|++|+|++|++++ +| +++++++|++|++++|++++ +|..+ .+|+.|++++|.+++ +| .++++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 467777777777764 66 47777777777777777764 55433 366666777776665 55 4666666666666
Q ss_pred CCCCCcccCCccccCcCCCCcccccCCcceecCC
Q 040641 93 HDNKFTREIPQNLGNLAQLEHLDVLRNMLCGKIP 126 (435)
Q Consensus 93 ~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g~~p 126 (435)
++|++++ +|... ++|+.|++++|.+. .+|
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-ccc
Confidence 6666654 44322 35555666665555 344
No 377
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.26 E-value=1.9e-13 Score=131.88 Aligned_cols=118 Identities=16% Similarity=0.197 Sum_probs=86.3
Q ss_pred CCccccCCCCCCeeecCCC---cccccCCccc-------CCCCCCcEEECCCCcCcc----CCCcCccCCCCCCeEECcC
Q 040641 5 IPSEFGDSLKLQGLYLGNN---QLTGSIPRSL-------GQLGGLVKLNLTRNKFSG----PVPTSLGNLKGLSHLDLSS 70 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n---~l~g~~p~~~-------~~l~~L~~L~ls~n~l~~----~~p~~~~~l~~L~~L~l~~ 70 (435)
|+..+..+++|+.|+|++| ++++.+|..+ ..+++|++|+|++|.+++ .+|..+..+++|++|+|++
T Consensus 52 l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~ 131 (386)
T 2ca6_A 52 LSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHN 131 (386)
T ss_dssp HHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCS
T ss_pred HHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcC
Confidence 3345777888888888884 5556666655 678888888888888886 4677788888888888888
Q ss_pred cccCCcCCCcCC----CC---------CCCCEEeCCCCCCc-ccCC---ccccCcCCCCcccccCCcce
Q 040641 71 NFFDGGWPRSLG----NL---------SYSTYLDLHDNKFT-REIP---QNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 71 n~l~~~~p~~~~----~l---------~~L~~L~l~~n~~~-~~~p---~~~~~l~~L~~l~l~~n~l~ 122 (435)
|.+++..+..+. .+ ++|++|++++|.++ +.+| ..+..+++|+.|++++|.++
T Consensus 132 n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 132 NGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 888644333333 33 78888888888886 4455 35667778888888888776
No 378
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.25 E-value=1.6e-13 Score=129.66 Aligned_cols=115 Identities=22% Similarity=0.257 Sum_probs=99.5
Q ss_pred CccccCCCCCCeeecCCCccccc-CCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCc-ccCC-cCCCcCC
Q 040641 6 PSEFGDSLKLQGLYLGNNQLTGS-IPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSN-FFDG-GWPRSLG 82 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~g~-~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n-~l~~-~~p~~~~ 82 (435)
++.+..+++|+.|+|++|.+++. +|..+..+++|+.|+|++|.+++..|..++.+++|+.|+|++| .+++ .+|..+.
T Consensus 86 ~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~ 165 (336)
T 2ast_B 86 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS 165 (336)
T ss_dssp CCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH
T ss_pred chhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHh
Confidence 34477899999999999999866 8888999999999999999998888888999999999999999 6775 3677788
Q ss_pred CCCCCCEEeCCCC-CCccc-CCccccCcC-CCCcccccCCc
Q 040641 83 NLSYSTYLDLHDN-KFTRE-IPQNLGNLA-QLEHLDVLRNM 120 (435)
Q Consensus 83 ~l~~L~~L~l~~n-~~~~~-~p~~~~~l~-~L~~l~l~~n~ 120 (435)
++++|++|++++| .+++. ++..+..++ +|++|++++|.
T Consensus 166 ~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 166 SCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp HCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred cCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 8999999999999 88764 677788889 99999999983
No 379
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.24 E-value=3.6e-13 Score=129.89 Aligned_cols=111 Identities=21% Similarity=0.246 Sum_probs=86.6
Q ss_pred CCCCeeecCCCccc-ccCC---cccCCCCCCcEEECCCCcCc--c---CCCcCccCCCCCCeEECcCcccC----CcCCC
Q 040641 13 LKLQGLYLGNNQLT-GSIP---RSLGQLGGLVKLNLTRNKFS--G---PVPTSLGNLKGLSHLDLSSNFFD----GGWPR 79 (435)
Q Consensus 13 ~~L~~L~l~~n~l~-g~~p---~~~~~l~~L~~L~ls~n~l~--~---~~p~~~~~l~~L~~L~l~~n~l~----~~~p~ 79 (435)
++|+.|+|++|+++ +.+| ..+..+++|+.|+|++|.++ | .+|..+..+++|+.|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 78888888888887 4455 46677888888888888887 2 34447788888888888888885 56777
Q ss_pred cCCCCCCCCEEeCCCCCCccc----CCccc--cCcCCCCcccccCCccee
Q 040641 80 SLGNLSYSTYLDLHDNKFTRE----IPQNL--GNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 80 ~~~~l~~L~~L~l~~n~~~~~----~p~~~--~~l~~L~~l~l~~n~l~g 123 (435)
.+..+++|++|++++|.+++. +|..+ +.+++|+.|++++|.+++
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 888888888888888888765 55655 347888888888888876
No 380
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.23 E-value=2e-11 Score=124.07 Aligned_cols=81 Identities=23% Similarity=0.281 Sum_probs=39.4
Q ss_pred CCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCCCCCCcccCCccccCcCCCCccccc
Q 040641 38 GLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVL 117 (435)
Q Consensus 38 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~ 117 (435)
+|+.|+|++|.+++ +| ..+++|+.|+|++|.|+ .+|. .+++|++|++++|+++ .+|..+.++++|+.|+++
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 34444444444442 33 22344445555555444 2333 3345555555555554 455555555555555555
Q ss_pred CCcceecCCc
Q 040641 118 RNMLCGKIPE 127 (435)
Q Consensus 118 ~n~l~g~~p~ 127 (435)
+|.+++.+|.
T Consensus 293 ~N~l~~~~~~ 302 (622)
T 3g06_A 293 GNPLSERTLQ 302 (622)
T ss_dssp SCCCCHHHHH
T ss_pred CCCCCCcCHH
Confidence 5555554444
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.23 E-value=6.2e-14 Score=122.06 Aligned_cols=110 Identities=20% Similarity=0.247 Sum_probs=99.5
Q ss_pred ccCCCCCCeeecCCCcccccCCc------ccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPR------SLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~------~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 82 (435)
+.....++.++++.|.++|.+|. .+..+++|++|+|++|.+++ +| .+..+++|+.|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45567889999999999999887 89999999999999999996 78 8999999999999999998 6888888
Q ss_pred CCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 83 NLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
.+++|++|++++|++++ +| .++.+++|+.|++++|.+++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 88999999999999986 66 68899999999999998874
No 382
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.21 E-value=7.6e-13 Score=126.41 Aligned_cols=124 Identities=21% Similarity=0.185 Sum_probs=99.1
Q ss_pred CcccCCccccCCCCCCeeecCCCcccccCC----cccCCCC-CCcEEECCCCcCccCCCcCccCC-----CCCCeEECcC
Q 040641 1 LTGSIPSEFGDSLKLQGLYLGNNQLTGSIP----RSLGQLG-GLVKLNLTRNKFSGPVPTSLGNL-----KGLSHLDLSS 70 (435)
Q Consensus 1 l~g~lp~~~~~l~~L~~L~l~~n~l~g~~p----~~~~~l~-~L~~L~ls~n~l~~~~p~~~~~l-----~~L~~L~l~~ 70 (435)
++|.+|..+...++|+.|+|++|.+++..+ ..+..++ +|+.|+|++|.+++..+..+..+ ++|+.|+|++
T Consensus 10 ~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~ 89 (362)
T 3goz_A 10 GSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSG 89 (362)
T ss_dssp TCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCS
T ss_pred chHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcC
Confidence 466777767777779999999999986665 6788888 89999999999997777777665 8999999999
Q ss_pred cccCCcCCCcCCC----C-CCCCEEeCCCCCCcccCCccccC-----cCCCCcccccCCcceec
Q 040641 71 NFFDGGWPRSLGN----L-SYSTYLDLHDNKFTREIPQNLGN-----LAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 71 n~l~~~~p~~~~~----l-~~L~~L~l~~n~~~~~~p~~~~~-----l~~L~~l~l~~n~l~g~ 124 (435)
|.+++..+..++. + ++|++|++++|.+++..+..++. .++|++|++++|.++..
T Consensus 90 n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 90 NFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp SCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred CcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 9998766664443 3 79999999999998766555433 25899999999988743
No 383
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.21 E-value=1e-12 Score=124.01 Aligned_cols=114 Identities=12% Similarity=0.094 Sum_probs=101.0
Q ss_pred ccCC--CCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccC-CCcCccCCCCCCeEECcCcccCCcCCCcCCCCC
Q 040641 9 FGDS--LKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGP-VPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS 85 (435)
Q Consensus 9 ~~~l--~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 85 (435)
+..+ +.++.|++++|.+.+..+. +..+++|+.|+|++|.+++. +|..+..+++|+.|+|++|.+++..|..++.++
T Consensus 64 ~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~ 142 (336)
T 2ast_B 64 TGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNS 142 (336)
T ss_dssp HHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCT
T ss_pred HHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCC
Confidence 4445 7899999999999976654 67899999999999999876 888899999999999999999988899999999
Q ss_pred CCCEEeCCCC-CCcc-cCCccccCcCCCCcccccCC-ccee
Q 040641 86 YSTYLDLHDN-KFTR-EIPQNLGNLAQLEHLDVLRN-MLCG 123 (435)
Q Consensus 86 ~L~~L~l~~n-~~~~-~~p~~~~~l~~L~~l~l~~n-~l~g 123 (435)
+|++|++++| .+++ .+|..+.++++|+.|++++| .+++
T Consensus 143 ~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 143 NLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp TCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred CCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 9999999999 6776 37777889999999999999 8875
No 384
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.21 E-value=8e-12 Score=113.33 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=76.1
Q ss_pred cceeeeecccCcceEEEEEc-CCCCE--EEEEEccccccc------------------------cHHHHHHHHHHhccCC
Q 040641 185 LTLVDILEDGGFGTVYKATL-PDGKT--VAVKKFSQAKTQ------------------------GHRQFTAEMETLGKVK 237 (435)
Q Consensus 185 ~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 237 (435)
+.+.+.||+|+||.||+|.. .+|+. ||||.++..... ....+.+|+.++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999987 67888 999987532111 0135788999999998
Q ss_pred CCCc--eeEEEEEEeCCeeEEEEecccC-C----CHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceee
Q 040641 238 HQNL--VLLLGYCSFDEEKLLVYEYMVN-G----SLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLH 300 (435)
Q Consensus 238 H~ni--v~l~g~~~~~~~~~lv~ey~~~-g----~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH 300 (435)
|+++ ...+++ +..++||||+.+ | +|.++... .++.....++.+++.||.|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH 187 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLY 187 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHH
Confidence 8864 334432 357899999953 4 67665432 123345678899999999999
No 385
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.16 E-value=4.3e-11 Score=113.68 Aligned_cols=113 Identities=19% Similarity=0.156 Sum_probs=70.5
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCc-CccCCCCCCe-EECcCcccCCcCCCcCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPT-SLGNLKGLSH-LDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~-~~~~l~~L~~-L~l~~n~l~~~~p~~~~ 82 (435)
||..+ .++++.|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|.. +++++|+++...|..|.
T Consensus 24 iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~ 101 (350)
T 4ay9_X 24 IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQ 101 (350)
T ss_dssp CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBC
T ss_pred cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhh
Confidence 55555 24677777777777632233567777777777777776655554 4566666553 55556777665566677
Q ss_pred CCCCCCEEeCCCCCCcccCCccccCcCCCCcccccCC
Q 040641 83 NLSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRN 119 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n 119 (435)
.+++|++|++++|+++...+..+....++..+++.++
T Consensus 102 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~ 138 (350)
T 4ay9_X 102 NLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN 138 (350)
T ss_dssp CCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC
T ss_pred hccccccccccccccccCCchhhcccchhhhhhhccc
Confidence 7777777777777776544444445555566666543
No 386
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.12 E-value=3.9e-10 Score=114.61 Aligned_cols=102 Identities=26% Similarity=0.328 Sum_probs=75.7
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 4 SIPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 4 ~lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
.||..+. ++|+.|+|++|.++ .+|. .+++|++|+|++|+++ .+|. .+++|+.|+|++|.+++ +|. .
T Consensus 54 ~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~ 119 (622)
T 3g06_A 54 TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---L 119 (622)
T ss_dssp CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---C
T ss_pred ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---C
Confidence 4676665 68888888888888 6776 5678888888888887 4776 66788888888888874 554 4
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCccee
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+++|++|++++|++++ +|.. +++|++|++++|.+++
T Consensus 120 l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 120 PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred CCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC
Confidence 5677778888887764 6653 3677777787777764
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.07 E-value=5.7e-12 Score=120.35 Aligned_cols=121 Identities=24% Similarity=0.258 Sum_probs=94.8
Q ss_pred ccccCCC-CCCeeecCCCcccccCCcccCCC-----CCCcEEECCCCcCccCCCcCc----cCC-CCCCeEECcCcccCC
Q 040641 7 SEFGDSL-KLQGLYLGNNQLTGSIPRSLGQL-----GGLVKLNLTRNKFSGPVPTSL----GNL-KGLSHLDLSSNFFDG 75 (435)
Q Consensus 7 ~~~~~l~-~L~~L~l~~n~l~g~~p~~~~~l-----~~L~~L~ls~n~l~~~~p~~~----~~l-~~L~~L~l~~n~l~~ 75 (435)
..+..++ +|+.|+|++|.+++..+..+..+ ++|+.|+|++|.+++..+..+ ..+ ++|+.|+|++|.+++
T Consensus 44 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 123 (362)
T 3goz_A 44 QAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS 123 (362)
T ss_dssp HHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred HHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc
Confidence 4567777 89999999999998777777775 999999999999987666544 444 899999999999987
Q ss_pred cCCCcC----CC-CCCCCEEeCCCCCCccc----CCccccCcC-CCCcccccCCcceecCCc
Q 040641 76 GWPRSL----GN-LSYSTYLDLHDNKFTRE----IPQNLGNLA-QLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 76 ~~p~~~----~~-l~~L~~L~l~~n~~~~~----~p~~~~~l~-~L~~l~l~~n~l~g~~p~ 127 (435)
..+..+ .. .++|++|++++|.++.. ++..+..++ +|+.|++++|.+++..+.
T Consensus 124 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~ 185 (362)
T 3goz_A 124 KSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCA 185 (362)
T ss_dssp SCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH
T ss_pred HHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHH
Confidence 655443 33 36899999999999853 344445565 899999999998765543
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.96 E-value=9.6e-10 Score=104.30 Aligned_cols=114 Identities=21% Similarity=0.120 Sum_probs=65.2
Q ss_pred cccCCCCCCe-eecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcC-------------------------ccCCC
Q 040641 8 EFGDSLKLQG-LYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTS-------------------------LGNLK 61 (435)
Q Consensus 8 ~~~~l~~L~~-L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~-------------------------~~~l~ 61 (435)
.|.++++|+. +.+++|+++...|..+..+++|++|++++|++++..+.. |..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 3555665543 445556666555556666666666666666665332222 23332
Q ss_pred -CCCeEECcCcccCCcCCCcCCCCCCCCEEeCCCCCCcccCCc-cccCcCCCCcccccCCcce
Q 040641 62 -GLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLHDNKFTREIPQ-NLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 62 -~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~l~l~~n~l~ 122 (435)
.++.|+|++|.++ .+|..+....+|++|++++|+..+.+|. .|..+++|+.||+++|.++
T Consensus 154 ~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 154 FESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp SSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred hhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 3556666666666 3555555555666677664333345554 3566777777777777666
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.95 E-value=1.1e-11 Score=122.35 Aligned_cols=113 Identities=19% Similarity=0.162 Sum_probs=84.6
Q ss_pred CCCCCCeeecCCCccccc----CCcccCCCCCCcEEECCCCcCccCCCcCccC-----CCCCCeEECcCcccCCc----C
Q 040641 11 DSLKLQGLYLGNNQLTGS----IPRSLGQLGGLVKLNLTRNKFSGPVPTSLGN-----LKGLSHLDLSSNFFDGG----W 77 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~g~----~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~-----l~~L~~L~l~~n~l~~~----~ 77 (435)
.+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|++++|.+++. +
T Consensus 254 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 333 (461)
T 1z7x_W 254 PSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF 333 (461)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHH
Confidence 578899999999988854 6777778889999999999887543333322 35788888888888765 5
Q ss_pred CCcCCCCCCCCEEeCCCCCCcccCCccccC-----cCCCCcccccCCccee
Q 040641 78 PRSLGNLSYSTYLDLHDNKFTREIPQNLGN-----LAQLEHLDVLRNMLCG 123 (435)
Q Consensus 78 p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~-----l~~L~~l~l~~n~l~g 123 (435)
|..+..+++|++|++++|.+++..+..+.. .++|+.|++++|.+++
T Consensus 334 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 334 SSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 666677788888888888887655554443 5688888888888774
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.87 E-value=5.1e-11 Score=117.40 Aligned_cols=123 Identities=20% Similarity=0.120 Sum_probs=98.5
Q ss_pred CCccccCCCCCCeeecCCCcccccC-----CcccCCCCCCcEEECCCCcCccC----CCcCccCCCCCCeEECcCcccCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSI-----PRSLGQLGGLVKLNLTRNKFSGP----VPTSLGNLKGLSHLDLSSNFFDG 75 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~-----p~~~~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~l~~n~l~~ 75 (435)
+|..+..+++|+.|+|++|.+++.- +..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 219 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 298 (461)
T 1z7x_W 219 LCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGD 298 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH
T ss_pred HHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCch
Confidence 5666788999999999999987542 22334689999999999999864 67778889999999999999875
Q ss_pred cCCCcCCC-----CCCCCEEeCCCCCCccc----CCccccCcCCCCcccccCCcceecCCc
Q 040641 76 GWPRSLGN-----LSYSTYLDLHDNKFTRE----IPQNLGNLAQLEHLDVLRNMLCGKIPE 127 (435)
Q Consensus 76 ~~p~~~~~-----l~~L~~L~l~~n~~~~~----~p~~~~~l~~L~~l~l~~n~l~g~~p~ 127 (435)
..+..+.. .++|++|++++|.+++. +|..+..+++|+.|++++|.+++..+.
T Consensus 299 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 299 EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 44433332 36899999999999865 567777889999999999998765443
No 391
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.77 E-value=6.4e-10 Score=100.23 Aligned_cols=80 Identities=23% Similarity=0.281 Sum_probs=53.8
Q ss_pred CCCCCCcEEECCCCcCcc--CCCcCccCCCCCCeEECcCcccCCcCCCcCCCCC--CCCEEeCCCCCCcccCCc------
Q 040641 34 GQLGGLVKLNLTRNKFSG--PVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLS--YSTYLDLHDNKFTREIPQ------ 103 (435)
Q Consensus 34 ~~l~~L~~L~ls~n~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~--~L~~L~l~~n~~~~~~p~------ 103 (435)
.++++|+.|+||+|++++ .+|..++.+++|+.|+|++|.|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 456778888888888876 4556666777888888888887753 2334444 777777777777766653
Q ss_pred -cccCcCCCCccc
Q 040641 104 -NLGNLAQLEHLD 115 (435)
Q Consensus 104 -~~~~l~~L~~l~ 115 (435)
-+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 245566666665
No 392
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.77 E-value=6.1e-10 Score=105.48 Aligned_cols=106 Identities=7% Similarity=-0.004 Sum_probs=68.3
Q ss_pred CcceeeeecccCcceEEEEEcCCCCEEEEEEcccccc--------------ccHHH--------HHHHHHHhccCCCCCc
Q 040641 184 KLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKT--------------QGHRQ--------FTAEMETLGKVKHQNL 241 (435)
Q Consensus 184 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~H~ni 241 (435)
-|.+...||+|+||.||+|...+|+.||||.++.... ..... ..+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4788999999999999999998999999998753210 01111 2346666766654443
Q ss_pred eeEEEEEEeCCeeEEEEecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 242 VLLLGYCSFDEEKLLVYEYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 242 v~l~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
.-..-+.. ...+|||||+++++|..+.. .+ ....++.|++.+|.|||+
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~--------~~--~~~~l~~qll~~l~~lH~ 223 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSS--------VP--DPASLYADLIALILRLAK 223 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCC--------CS--CHHHHHHHHHHHHHHHHH
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhcc--------cH--HHHHHHHHHHHHHHHHHH
Confidence 21111111 12379999999988754321 11 123567788888888875
No 393
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.70 E-value=7.6e-10 Score=105.66 Aligned_cols=111 Identities=23% Similarity=0.171 Sum_probs=78.0
Q ss_pred CCCCeeecCCCcccccCCccc-CCCCCCcEEECCCCcCccCCCcCc-----cCCCCCCeEECcCcccCC----cCCCcCC
Q 040641 13 LKLQGLYLGNNQLTGSIPRSL-GQLGGLVKLNLTRNKFSGPVPTSL-----GNLKGLSHLDLSSNFFDG----GWPRSLG 82 (435)
Q Consensus 13 ~~L~~L~l~~n~l~g~~p~~~-~~l~~L~~L~ls~n~l~~~~p~~~-----~~l~~L~~L~l~~n~l~~----~~p~~~~ 82 (435)
++|+.|+|++|.++..-...+ ..+++|+.|+|++|.++..-...+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 688899999998864333333 245678899999998864333333 245778899999988864 2444556
Q ss_pred CCCCCCEEeCCCCCCccc----CCccccCcCCCCcccccCCccee
Q 040641 83 NLSYSTYLDLHDNKFTRE----IPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 83 ~l~~L~~L~l~~n~~~~~----~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
.+++|++|+|++|.++.. ++..+...++|+.|++++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 678888999998888642 34456667788889998888764
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.61 E-value=1.8e-08 Score=90.80 Aligned_cols=80 Identities=24% Similarity=0.243 Sum_probs=66.9
Q ss_pred cCCCCCCeeecCCCcccc--cCCcccCCCCCCcEEECCCCcCccCCCcCccCCC--CCCeEECcCcccCCcCCC------
Q 040641 10 GDSLKLQGLYLGNNQLTG--SIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLK--GLSHLDLSSNFFDGGWPR------ 79 (435)
Q Consensus 10 ~~l~~L~~L~l~~n~l~g--~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~--~L~~L~l~~n~l~~~~p~------ 79 (435)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..++ +|+.|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 357899999999999997 5667788999999999999999964 3455555 899999999999987773
Q ss_pred -cCCCCCCCCEEe
Q 040641 80 -SLGNLSYSTYLD 91 (435)
Q Consensus 80 -~~~~l~~L~~L~ 91 (435)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 356788999887
No 395
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.60 E-value=4.2e-09 Score=90.16 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=89.1
Q ss_pred ccCCCCCCeeecCCC-ccccc----CCcccCCCCCCcEEECCCCcCccC----CCcCccCCCCCCeEECcCcccCCc---
Q 040641 9 FGDSLKLQGLYLGNN-QLTGS----IPRSLGQLGGLVKLNLTRNKFSGP----VPTSLGNLKGLSHLDLSSNFFDGG--- 76 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n-~l~g~----~p~~~~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~--- 76 (435)
+...+.|+.|+|++| .+... +...+...++|++|+|++|.+... +...+...++|+.|+|++|.++..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 456789999999999 87632 456677789999999999999742 344556668899999999999743
Q ss_pred -CCCcCCCCCCCCEEeC--CCCCCccc----CCccccCcCCCCcccccCCcce
Q 040641 77 -WPRSLGNLSYSTYLDL--HDNKFTRE----IPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 77 -~p~~~~~l~~L~~L~l--~~n~~~~~----~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
+...+...+.|++|++ ++|.++.. +...+...++|+.|++++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4566777889999999 88998754 3334555688999999999875
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.52 E-value=3.6e-09 Score=101.00 Aligned_cols=112 Identities=20% Similarity=0.155 Sum_probs=82.8
Q ss_pred CCCCCeeecCCCcccccCCcccCC-----CCCCcEEECCCCcCccCCCcCc-cCCCCCCeEECcCcccCCcCCCcC----
Q 040641 12 SLKLQGLYLGNNQLTGSIPRSLGQ-----LGGLVKLNLTRNKFSGPVPTSL-GNLKGLSHLDLSSNFFDGGWPRSL---- 81 (435)
Q Consensus 12 l~~L~~L~l~~n~l~g~~p~~~~~-----l~~L~~L~ls~n~l~~~~p~~~-~~l~~L~~L~l~~n~l~~~~p~~~---- 81 (435)
++.|+.|+|++|.++..-...+.. .++|+.|+|++|.++..-...+ ..+++|+.|||++|.++..-...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467999999999998544333332 3799999999999975323232 345689999999999975433333
Q ss_pred -CCCCCCCEEeCCCCCCcc----cCCccccCcCCCCcccccCCccee
Q 040641 82 -GNLSYSTYLDLHDNKFTR----EIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 82 -~~l~~L~~L~l~~n~~~~----~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
...++|++|+|++|.++. .++..+...++|++|++++|.++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 346789999999999864 244455778899999999998864
No 397
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.52 E-value=1.8e-09 Score=109.73 Aligned_cols=114 Identities=13% Similarity=0.087 Sum_probs=73.5
Q ss_pred cCCCCCCeeecCCCcccccCCcccCC-CCCCcEEECC----CCcCccC-----CCcCccCCCCCCeEECcCc--ccCCcC
Q 040641 10 GDSLKLQGLYLGNNQLTGSIPRSLGQ-LGGLVKLNLT----RNKFSGP-----VPTSLGNLKGLSHLDLSSN--FFDGGW 77 (435)
Q Consensus 10 ~~l~~L~~L~l~~n~l~g~~p~~~~~-l~~L~~L~ls----~n~l~~~-----~p~~~~~l~~L~~L~l~~n--~l~~~~ 77 (435)
..+++|+.|+|+.|.+++..+..++. +++|+.|+++ .|.+++. ++..+..+++|+.|+++++ .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 34678888888888887766666655 7788888885 6667642 2233556777777777642 355444
Q ss_pred CCcCCC-CCCCCEEeCCCCCCcc-cCCccccCcCCCCcccccCCccee
Q 040641 78 PRSLGN-LSYSTYLDLHDNKFTR-EIPQNLGNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 78 p~~~~~-l~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~l~g 123 (435)
+..++. +++|++|++++|.+++ .++..+..+++|+.|++++|.+++
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 444433 6677777777777765 344445666777777777776653
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.52 E-value=6.5e-07 Score=83.86 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=45.1
Q ss_pred CCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCCCCCCcccCCccccCcCCCC-cccccC
Q 040641 60 LKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQLE-HLDVLR 118 (435)
Q Consensus 60 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~-~l~l~~ 118 (435)
+++|+.|+|++|.++..-+..|.++.+|+.+++++| ++..-+..|.++.+|+ .+++..
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc
Confidence 678888999988887544457888889999999887 6544455688888888 888877
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.48 E-value=3.4e-07 Score=85.78 Aligned_cols=102 Identities=17% Similarity=0.069 Sum_probs=64.0
Q ss_pred CCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCC-eEECcCcccCCcCCCcCCCCCCCCEE
Q 040641 12 SLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLS-HLDLSSNFFDGGWPRSLGNLSYSTYL 90 (435)
Q Consensus 12 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~-~L~l~~n~l~~~~p~~~~~l~~L~~L 90 (435)
+++|+.|+|++|+++..-+..|.++++|+.|+|++| +...-+.+|.+|.+|+ .+++.+ .++..-+..|.+|++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566777777777776333345667777777777766 5532333567777777 777766 4553344566777777777
Q ss_pred eCCCCCCcccCCccccCcCCCCccc
Q 040641 91 DLHDNKFTREIPQNLGNLAQLEHLD 115 (435)
Q Consensus 91 ~l~~n~~~~~~p~~~~~l~~L~~l~ 115 (435)
+++.|+++..-+..|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 7777776644445666666666654
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.45 E-value=2e-08 Score=101.99 Aligned_cols=81 Identities=11% Similarity=0.043 Sum_probs=41.0
Q ss_pred CCCCCCeeecCCCccccc----CCcccCCCCCCcEEECCCCcCc----cCCCcCccCCCCCCeEECcCcccCCcCCCcCC
Q 040641 11 DSLKLQGLYLGNNQLTGS----IPRSLGQLGGLVKLNLTRNKFS----GPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLG 82 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~g~----~p~~~~~l~~L~~L~ls~n~l~----~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 82 (435)
.+++|+.|+|++|.+++. ++..+.++++|+.|+|++|.++ +.++..+..+++|+.|++++|.+.+ +|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 455666666666665543 2333345556666666666654 2233334455666666666665543 333333
Q ss_pred CCCCCCEEeC
Q 040641 83 NLSYSTYLDL 92 (435)
Q Consensus 83 ~l~~L~~L~l 92 (435)
.+++|++|++
T Consensus 241 ~~~~L~~L~l 250 (592)
T 3ogk_B 241 AAANLEEFCG 250 (592)
T ss_dssp HCTTCCEEEE
T ss_pred hhhHHHhhcc
Confidence 3344444433
No 401
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.32 E-value=7.5e-07 Score=80.48 Aligned_cols=109 Identities=14% Similarity=0.002 Sum_probs=84.8
Q ss_pred cCcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCC-CCCceeEEEEEEeCCeeEEEEecc
Q 040641 183 LKLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-HQNLVLLLGYCSFDEEKLLVYEYM 261 (435)
Q Consensus 183 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~ 261 (435)
..+++...++.|+++.||++... ++.+++|............+.+|+++++.+. |.++.++++++...+..|+||||+
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i 92 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA 92 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred ccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence 35777888898999999999864 6889999986532223345889999998884 677889999999889999999999
Q ss_pred cCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 262 VNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 262 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
+|.+|...+.. ......++.+++++++.||+
T Consensus 93 ~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~ 123 (263)
T 3tm0_A 93 DGVLCSEEYED---------EQSPEKIIELYAECIRLFHS 123 (263)
T ss_dssp SSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHH
T ss_pred CCeehhhccCC---------cccHHHHHHHHHHHHHHHhC
Confidence 99998765311 11234678889999999997
No 402
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.09 E-value=4.2e-07 Score=86.05 Aligned_cols=117 Identities=16% Similarity=0.173 Sum_probs=79.5
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCcc--CCCCCCeEECcC--cccCCc----
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLG--NLKGLSHLDLSS--NFFDGG---- 76 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~--~l~~L~~L~l~~--n~l~~~---- 76 (435)
|+.-+..+++|+.|+|++|.-. .++. +. +++|+.|+|+.+.+.......+. .+++|+.|+|+. |...|.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~ 240 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMN 240 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGG
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHH
Confidence 4445567889999999988411 3444 43 88999999998877643333333 689999999863 332221
Q ss_pred -CCCcC--CCCCCCCEEeCCCCCCcccCCcccc---CcCCCCcccccCCcceec
Q 040641 77 -WPRSL--GNLSYSTYLDLHDNKFTREIPQNLG---NLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 77 -~p~~~--~~l~~L~~L~l~~n~~~~~~p~~~~---~l~~L~~l~l~~n~l~g~ 124 (435)
+...+ ..+++|++|++.+|.+....+..+. .+++|++|+++.|.+...
T Consensus 241 ~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 241 VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 11122 3578999999999988754433332 578999999999988753
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.08 E-value=1.3e-07 Score=96.05 Aligned_cols=112 Identities=13% Similarity=0.103 Sum_probs=76.2
Q ss_pred CCCCCCeeecCCCcccccCCcccC-CCCCCcEEECC--C----CcCccC-----CCcCccCCCCCCeEECcCcccCCcCC
Q 040641 11 DSLKLQGLYLGNNQLTGSIPRSLG-QLGGLVKLNLT--R----NKFSGP-----VPTSLGNLKGLSHLDLSSNFFDGGWP 78 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~L~ls--~----n~l~~~-----~p~~~~~l~~L~~L~l~~n~l~~~~p 78 (435)
.+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++. ++..+..+++|+.|+|++ .+++..+
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~ 448 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVF 448 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHH
Confidence 367888888888888766665554 47888888888 3 555521 111255677888888866 5555444
Q ss_pred CcCCC-CCCCCEEeCCCCCCcccCCccc-cCcCCCCcccccCCccee
Q 040641 79 RSLGN-LSYSTYLDLHDNKFTREIPQNL-GNLAQLEHLDVLRNMLCG 123 (435)
Q Consensus 79 ~~~~~-l~~L~~L~l~~n~~~~~~p~~~-~~l~~L~~l~l~~n~l~g 123 (435)
..++. +++|++|++++|.+++..+..+ ..+++|+.|++++|.+++
T Consensus 449 ~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 45554 7778888888888766554444 557788888888887743
No 404
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.04 E-value=7e-06 Score=75.16 Aligned_cols=99 Identities=20% Similarity=0.224 Sum_probs=74.2
Q ss_pred ceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCC---CceeEEEEEEeCCeeEEEEeccc
Q 040641 186 TLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQ---NLVLLLGYCSFDEEKLLVYEYMV 262 (435)
Q Consensus 186 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lv~ey~~ 262 (435)
.-.+.++.|.++.||+++..+|+.++||............|.+|++.|+.++|. .+.+++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345678999999999999888999999997543333346789999999999875 577777763 4699999999
Q ss_pred CCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec----ccccc
Q 040641 263 NGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ----DFGLA 306 (435)
Q Consensus 263 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~----DfGla 306 (435)
++++.. ....++++.|+-||+ +||..
T Consensus 94 g~~~~~------------------~~~~~lg~~LA~LH~~~~~~fG~~ 123 (288)
T 3d1u_A 94 ERPPTP------------------EAAERFGHQLAAMHLAGAESFGAT 123 (288)
T ss_dssp CCCCCH------------------HHHHHHHHHHHHHHHTCCSSBBCS
T ss_pred cCCCCh------------------HHHHHHHHHHHHHHcCCCCccCCC
Confidence 986421 134456677778886 56654
No 405
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.00 E-value=5.2e-07 Score=91.55 Aligned_cols=109 Identities=16% Similarity=0.120 Sum_probs=70.0
Q ss_pred CCCCCCeeecCCCcccccCCcccC-CCCCCcEEECCCC-cCccC-CCcCccCCCCCCeEECcCcccCCcCCCcC----CC
Q 040641 11 DSLKLQGLYLGNNQLTGSIPRSLG-QLGGLVKLNLTRN-KFSGP-VPTSLGNLKGLSHLDLSSNFFDGGWPRSL----GN 83 (435)
Q Consensus 11 ~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~L~ls~n-~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~----~~ 83 (435)
.+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+..+++|+.|+|++|.+++..+..+ ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 466788888888877766666664 5778888888877 44432 34444567788888888887765433333 35
Q ss_pred CCCCCEEeCCCCC--Ccc-cCCccccCcCCCCcccccCC
Q 040641 84 LSYSTYLDLHDNK--FTR-EIPQNLGNLAQLEHLDVLRN 119 (435)
Q Consensus 84 l~~L~~L~l~~n~--~~~-~~p~~~~~l~~L~~l~l~~n 119 (435)
+++|++|++++|. ++. .++.-+.++++|++|++++|
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 6678888888776 211 11111234577888888776
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.97 E-value=7e-07 Score=76.16 Aligned_cols=91 Identities=14% Similarity=0.119 Sum_probs=72.4
Q ss_pred cccCCCCCCeeecCCCccccc----CCcccCCCCCCcEEECCCCcCccC----CCcCccCCCCCCeEEC--cCcccCCc-
Q 040641 8 EFGDSLKLQGLYLGNNQLTGS----IPRSLGQLGGLVKLNLTRNKFSGP----VPTSLGNLKGLSHLDL--SSNFFDGG- 76 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~----~p~~~~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~l--~~n~l~~~- 76 (435)
.+...++|++|+|++|.+... +...+...++|++|+|++|.++.. +...+...++|+.|+| ++|.++..
T Consensus 60 ~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g 139 (185)
T 1io0_A 60 ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 139 (185)
T ss_dssp HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHH
Confidence 456678999999999998642 455666778999999999999853 4567778889999999 88998743
Q ss_pred ---CCCcCCCCCCCCEEeCCCCCCc
Q 040641 77 ---WPRSLGNLSYSTYLDLHDNKFT 98 (435)
Q Consensus 77 ---~p~~~~~l~~L~~L~l~~n~~~ 98 (435)
+...+...+.|++|++++|.+.
T Consensus 140 ~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 140 EMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3344556689999999999874
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.94 E-value=2.4e-06 Score=80.77 Aligned_cols=116 Identities=12% Similarity=0.113 Sum_probs=77.5
Q ss_pred CccccCCCCCCeeecCCCccc---------ccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCc
Q 040641 6 PSEFGDSLKLQGLYLGNNQLT---------GSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGG 76 (435)
Q Consensus 6 p~~~~~l~~L~~L~l~~n~l~---------g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~ 76 (435)
..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .+++ +. +++|+.|+|..+.+...
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHH
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChH
Confidence 445667889999999765431 234555677899999999988422 3444 43 78999999998887643
Q ss_pred CCCcCC--CCCCCCEEeCCC--CCCccc-----CCccc--cCcCCCCcccccCCcceec
Q 040641 77 WPRSLG--NLSYSTYLDLHD--NKFTRE-----IPQNL--GNLAQLEHLDVLRNMLCGK 124 (435)
Q Consensus 77 ~p~~~~--~l~~L~~L~l~~--n~~~~~-----~p~~~--~~l~~L~~l~l~~n~l~g~ 124 (435)
....++ .+++|++|+|+. |...+. +...+ ..+++|++|++++|.+...
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~ 267 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNV 267 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHH
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchH
Confidence 333343 689999999863 222111 11122 3578999999999987643
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.83 E-value=1.4e-05 Score=71.72 Aligned_cols=103 Identities=12% Similarity=0.044 Sum_probs=74.8
Q ss_pred CcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCC--ceeEEEEEEeCCeeEEEEecc
Q 040641 184 KLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQN--LVLLLGYCSFDEEKLLVYEYM 261 (435)
Q Consensus 184 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lv~ey~ 261 (435)
.+.+..+.+.|..+.||++...+|+.+++|..... ....+.+|+.+++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34444444566679999998877888999987543 2245778999998886545 455888888878889999999
Q ss_pred cCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 262 VNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 262 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
+|.+|. ... .+ ...++.++++.++.||+
T Consensus 98 ~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~ 125 (264)
T 1nd4_A 98 PGQDLL--SSH-------LA---PAEKVSIMADAMRRLHT 125 (264)
T ss_dssp SSEETT--TSC-------CC---HHHHHHHHHHHHHHHTT
T ss_pred CCcccC--cCc-------CC---HhHHHHHHHHHHHHHhC
Confidence 998874 110 11 22567888888999996
No 409
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.78 E-value=0.00011 Score=70.48 Aligned_cols=78 Identities=14% Similarity=0.126 Sum_probs=37.9
Q ss_pred CCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCC
Q 040641 14 KLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLH 93 (435)
Q Consensus 14 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 93 (435)
+|+.+.|.+ .++..-+..|.++++|+.++|+.|.++ .+|...-.+.+|+.+.|..| ++..-...|.++.+|+.+++.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 455555553 444233345555666666666655555 33333222455555555533 332223345555555555554
Q ss_pred C
Q 040641 94 D 94 (435)
Q Consensus 94 ~ 94 (435)
.
T Consensus 235 ~ 235 (401)
T 4fdw_A 235 E 235 (401)
T ss_dssp T
T ss_pred C
Confidence 4
No 410
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.67 E-value=0.00015 Score=69.68 Aligned_cols=109 Identities=17% Similarity=0.102 Sum_probs=85.0
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCc-----cCCCcCccCCCCCCeEECcCcccCCcCCCcCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFS-----GPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGN 83 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~-----~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 83 (435)
|.+ .+|+.+.|. |.++..-+..|.++++|+.+++.+|.+. ..-+..|.+|++|+.++|.+ .++..-...|.+
T Consensus 245 F~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~ 321 (401)
T 4fdw_A 245 FRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGG 321 (401)
T ss_dssp TTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTT
T ss_pred ccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcC
Confidence 444 789999995 5566444678999999999999998875 22345799999999999994 576444568889
Q ss_pred CCCCCEEeCCCCCCcccCCccccCcCCCCcccccCCcce
Q 040641 84 LSYSTYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 84 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
|.+|+.+++..| ++..-+..|.++ +|+.++++.|.+.
T Consensus 322 c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 322 NRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred CCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 999999999665 554445678888 9999999998654
No 411
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.53 E-value=1.2e-05 Score=67.08 Aligned_cols=83 Identities=12% Similarity=0.055 Sum_probs=46.5
Q ss_pred CCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcc-cCCcCCCcCCCC----CCCCEEeCCCCC-CcccCCccccCcCC
Q 040641 37 GGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNF-FDGGWPRSLGNL----SYSTYLDLHDNK-FTREIPQNLGNLAQ 110 (435)
Q Consensus 37 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l----~~L~~L~l~~n~-~~~~~p~~~~~l~~ 110 (435)
-.|+.||||++.++..--..+..|++|+.|+|+++. ++..--..++.+ ++|++|+|++|. +|..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356677777666653322335566777777777664 442211223332 357777777663 54332234566777
Q ss_pred CCcccccCC
Q 040641 111 LEHLDVLRN 119 (435)
Q Consensus 111 L~~l~l~~n 119 (435)
|++|++++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 777777765
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=97.53 E-value=7.3e-05 Score=70.67 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=78.0
Q ss_pred eeeeecccCcceEEEEEcCCCCEEEEEEcc--cccc-ccHHHHHHHHHHhccCC--CCCceeEEEEEEeC---CeeEEEE
Q 040641 187 LVDILEDGGFGTVYKATLPDGKTVAVKKFS--QAKT-QGHRQFTAEMETLGKVK--HQNLVLLLGYCSFD---EEKLLVY 258 (435)
Q Consensus 187 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~ 258 (435)
..+.++.|.++.||+....+ ..+++|+.. .... .....+.+|..+++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999998754 678888875 3221 22346788999998887 45678899988766 4589999
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
||++|..+.+. ....++...+..++.++++.|+.||+
T Consensus 121 e~v~G~~l~~~------~~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 121 EFVSGRVLWDQ------SLPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp ECCCCBCCCCT------TCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCeecCCC------ccccCCHHHHHHHHHHHHHHHHHHhC
Confidence 99999876321 11236677888899999999999997
No 413
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.28 E-value=3.8e-05 Score=64.09 Aligned_cols=92 Identities=17% Similarity=0.135 Sum_probs=61.4
Q ss_pred CCccccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCc-CccCCCcCccCC----CCCCeEECcCcc-cCCcCC
Q 040641 5 IPSEFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNK-FSGPVPTSLGNL----KGLSHLDLSSNF-FDGGWP 78 (435)
Q Consensus 5 lp~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~-l~~~~p~~~~~l----~~L~~L~l~~n~-l~~~~p 78 (435)
+|.....--.|+.|||+++.++..--..+.++++|+.|+|+++. ++..--..+..+ ++|+.|||+++. ++..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 55543333568889999888775544567788899999998874 553222234443 368899998874 653222
Q ss_pred CcCCCCCCCCEEeCCCCC
Q 040641 79 RSLGNLSYSTYLDLHDNK 96 (435)
Q Consensus 79 ~~~~~l~~L~~L~l~~n~ 96 (435)
..+..+++|++|+++++.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 346678888999888775
No 414
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.19 E-value=5.6e-05 Score=64.33 Aligned_cols=113 Identities=13% Similarity=0.143 Sum_probs=77.2
Q ss_pred cCCCCCCeeecCCC-cccc----cCCcccCCCCCCcEEECCCCcCccC----CCcCccCCCCCCeEECcCcccCCc----
Q 040641 10 GDSLKLQGLYLGNN-QLTG----SIPRSLGQLGGLVKLNLTRNKFSGP----VPTSLGNLKGLSHLDLSSNFFDGG---- 76 (435)
Q Consensus 10 ~~l~~L~~L~l~~n-~l~g----~~p~~~~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~---- 76 (435)
.+-+.|+.|+|++| .+.. .+-..+..-+.|+.|+|++|++... +-..+..-+.|+.|+|++|.|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 44578999999986 6642 2455677788999999999999743 223344557899999999999742
Q ss_pred CCCcCCCCCCCCEEeCCCCC---Ccc----cCCccccCcCCCCcccccCCcce
Q 040641 77 WPRSLGNLSYSTYLDLHDNK---FTR----EIPQNLGNLAQLEHLDVLRNMLC 122 (435)
Q Consensus 77 ~p~~~~~l~~L~~L~l~~n~---~~~----~~p~~~~~l~~L~~l~l~~n~l~ 122 (435)
+-..+..=..|++|+|++|. +.. .+...+..-+.|+.|+++.|...
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 23344455679999998653 321 12333444567888888877543
No 415
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.03 E-value=0.0014 Score=51.88 Aligned_cols=36 Identities=22% Similarity=0.151 Sum_probs=18.4
Q ss_pred CCCeEECcCcccCCcCCCcCCCCCCCCEEeCCCCCC
Q 040641 62 GLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLHDNKF 97 (435)
Q Consensus 62 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 97 (435)
+|+.|+|++|.|+..-+..|..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 355555555555533333444555555555555544
No 416
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.93 E-value=0.0019 Score=51.05 Aligned_cols=55 Identities=27% Similarity=0.320 Sum_probs=33.4
Q ss_pred eeecCCCccc-ccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCccc
Q 040641 17 GLYLGNNQLT-GSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFF 73 (435)
Q Consensus 17 ~L~l~~n~l~-g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l 73 (435)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5666666664 34554432 3567777777777643333466667777777777655
No 417
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.77 E-value=0.0078 Score=57.36 Aligned_cols=107 Identities=8% Similarity=0.164 Sum_probs=60.7
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCC-cCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVP-TSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
|.++..|+.+.+.++..+ .-...+.++++|+.+.+.. .+. .|+ ..|.+|.+|+.++|..+ ++..-..+|.++.+|
T Consensus 261 F~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccEEecccccce-ecCcccccccccccccCCC-ccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 455566666666654433 3334566667777777653 343 233 34666777777777654 332223456667777
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCc
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNM 120 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~ 120 (435)
+.+.+..+ ++..-...|.++.+|+.+++.+|.
T Consensus 337 ~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 337 ERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred CEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 77777544 432223456666777777666553
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=96.76 E-value=0.0018 Score=59.95 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=73.9
Q ss_pred CcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCC----CCceeEEEEEEeCCeeEEEEe
Q 040641 184 KLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKH----QNLVLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 184 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~~~~~~~~lv~e 259 (435)
.+.-.+.++.|....||+. +..+++|...... ....+.+|.+++..+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 3445677899999999998 5678888764322 23458899998888866 123444544 56789999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
|++|.++...... .++..++..++.++++.++-||+
T Consensus 108 ~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~ 143 (320)
T 3r70_A 108 YIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHS 143 (320)
T ss_dssp CCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhC
Confidence 9999988643221 25667778899999999999996
No 419
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.50 E-value=0.014 Score=55.27 Aligned_cols=108 Identities=12% Similarity=0.078 Sum_probs=62.3
Q ss_pred ccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCC
Q 040641 9 FGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYST 88 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 88 (435)
+.....|+.+.+..+ +...-...+.++..|+.+.+..+ ++..-...+.++.+|+.+.+..+ ++..-...|.++.+|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 445566777766544 23233445666777777777655 33222335666777777776544 3322233566677777
Q ss_pred EEeCCCCCCcccCCccccCcCCCCcccccCC
Q 040641 89 YLDLHDNKFTREIPQNLGNLAQLEHLDVLRN 119 (435)
Q Consensus 89 ~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n 119 (435)
.+.+.++.++..-...|.++.+|+.+++..+
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 7777666665333455666677777766543
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=96.45 E-value=0.0076 Score=55.33 Aligned_cols=102 Identities=16% Similarity=0.054 Sum_probs=74.8
Q ss_pred eeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCC---CceeEEEEEE-eCCeeEEEEecccC
Q 040641 188 VDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQ---NLVLLLGYCS-FDEEKLLVYEYMVN 263 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~ey~~~ 263 (435)
.+.++.|....||+. +..++||.-.. ......+.+|.++|..+.+. .+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456788888899988 56788887432 22345788999999998753 2456666664 44567899999999
Q ss_pred CCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 264 GSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 264 g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
..+...... .++...+..++.++++.|+-||+
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~ 129 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSA 129 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhc
Confidence 988663221 24667778889999999999997
No 421
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.35 E-value=0.0056 Score=56.33 Aligned_cols=94 Identities=21% Similarity=0.197 Sum_probs=69.5
Q ss_pred ceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCC---CCCceeEEEEEEeCCeeEEEEeccc
Q 040641 186 TLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK---HQNLVLLLGYCSFDEEKLLVYEYMV 262 (435)
Q Consensus 186 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ey~~ 262 (435)
.-.+.++.|.+..+|+... ++..++||..... ....|..|.+.|+.+. ...+.++++++...+..++||||++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 3456789999999999986 4678888886532 2456888998888774 3567888888888888999999999
Q ss_pred CCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 263 NGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 263 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
+..+.. ..+.++++.|+-||+
T Consensus 115 G~~~~~------------------~~~~~lG~~LA~LH~ 135 (312)
T 3jr1_A 115 KSKNKQ------------------SSFTIFAEKIAQLHQ 135 (312)
T ss_dssp CCCCCT------------------THHHHHHHHHHHHHH
T ss_pred CCCCCc------------------hhHHHHHHHHHHHHc
Confidence 876310 134456667777885
No 422
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.26 E-value=0.011 Score=56.37 Aligned_cols=108 Identities=10% Similarity=0.142 Sum_probs=73.1
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.|.++..|+.+.+. +.++..-...|.++++|+.+.|..+ ++..-..+|.+|.+|+.+.|..+ ++..-..+|.++.+|
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L 359 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTAL 359 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTC
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCC
Confidence 46678899999997 4555333457889999999999865 55222457999999999999765 553334588999999
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCCcc
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRNML 121 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~l 121 (435)
+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 360 ~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 360 NNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 999999886432 3456677888888776644
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.19 E-value=0.0096 Score=54.01 Aligned_cols=78 Identities=18% Similarity=0.249 Sum_probs=57.4
Q ss_pred CcceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCC---CceeEEEEEEeCCeeEEEEec
Q 040641 184 KLTLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQ---NLVLLLGYCSFDEEKLLVYEY 260 (435)
Q Consensus 184 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lv~ey 260 (435)
.+.-.+.+|.|..+.||+.+..+|+.|.||+-..........|..|...|+.+.-. -+.+++++ +..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 34556778999999999999999999999987654444445688899988877422 24455554 235799999
Q ss_pred ccCCC
Q 040641 261 MVNGS 265 (435)
Q Consensus 261 ~~~g~ 265 (435)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98765
No 424
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=96.10 E-value=0.016 Score=51.85 Aligned_cols=101 Identities=17% Similarity=0.069 Sum_probs=71.5
Q ss_pred eecccCcc-eEEEEEcC-CCCEEEEEEccccccccHHHHHHHHHHhccCC-CCCceeEEEEEEeCCeeEEEEecccCCCH
Q 040641 190 ILEDGGFG-TVYKATLP-DGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-HQNLVLLLGYCSFDEEKLLVYEYMVNGSL 266 (435)
Q Consensus 190 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~g~L 266 (435)
.+..|..| .||+.... ++..+.+|.-... ....+.+|...|+.+. +--+-++++++...+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34456555 68998765 4567888876432 2356788999888774 22356788999999999999999999998
Q ss_pred HHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 267 DLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 267 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
.+..... ......++.++++.++-||+
T Consensus 108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~ 134 (272)
T 4gkh_A 108 FQVLEEY--------PDSGENIVDALAVFLRRLHS 134 (272)
T ss_dssp HHHHHHC--------GGGHHHHHHHHHHHHHHHHT
T ss_pred cccccCC--------HHHHHHHHHHHHHHHHHhcC
Confidence 7765421 12234567778888888886
No 425
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=95.97 E-value=0.0044 Score=56.77 Aligned_cols=102 Identities=18% Similarity=0.167 Sum_probs=71.9
Q ss_pred eeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCC-CCC--ceeEEEEEEeCC---eeEEEEecc
Q 040641 188 VDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-HQN--LVLLLGYCSFDE---EKLLVYEYM 261 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lv~ey~ 261 (435)
.+.++.|.+..||+.. ..+++|..... .....+.+|.++|+.+. +.. +.++++.....+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 3558999999999864 46888886432 23457889999998873 332 334454443332 348999999
Q ss_pred cCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 262 VNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 262 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
+|.++...... .++..++..++.++++.++.||+
T Consensus 99 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~ 132 (304)
T 3sg8_A 99 KGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHS 132 (304)
T ss_dssp CCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHc
Confidence 99887653321 26677888899999999999996
No 426
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.75 E-value=0.017 Score=55.05 Aligned_cols=106 Identities=10% Similarity=0.104 Sum_probs=77.2
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.+..+..++.+.+..+.+. ...+..+.+|+.+.+..+ +...-..+|.+|.+|+.++|..+ ++..-..+|.++.+|
T Consensus 271 ~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 4566777888877765432 246778899999999765 55222346889999999999755 553334678899999
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCC
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRN 119 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n 119 (435)
+.+++..| ++..-...|.++.+|+.+++..+
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 99999877 55444567888999999988655
No 427
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.65 E-value=0.04 Score=52.36 Aligned_cols=106 Identities=12% Similarity=0.055 Sum_probs=81.3
Q ss_pred cccCCCCCCeeecCCCcccccCCcccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCC
Q 040641 8 EFGDSLKLQGLYLGNNQLTGSIPRSLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYS 87 (435)
Q Consensus 8 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 87 (435)
.+..+..|+.+.+..+... .-...+..+..|+.+....+.+. ...+..+.+|+.+.+..+ ++..-...|.++.+|
T Consensus 248 ~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L 322 (394)
T 4fs7_A 248 VFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSL 322 (394)
T ss_dssp TTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred cccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCC
Confidence 3567788999999888665 55667889999999988776542 235888999999999765 553334578899999
Q ss_pred CEEeCCCCCCcccCCccccCcCCCCcccccCC
Q 040641 88 TYLDLHDNKFTREIPQNLGNLAQLEHLDVLRN 119 (435)
Q Consensus 88 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n 119 (435)
+.+++.++ ++..-...|.++.+|+.+++..|
T Consensus 323 ~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 323 VSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred CEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 99999755 55333567889999999998766
No 428
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=95.41 E-value=0.006 Score=57.26 Aligned_cols=115 Identities=10% Similarity=0.021 Sum_probs=75.1
Q ss_pred eeeee-cccCcceEEEEEcC-------CCCEEEEEEccccc---cccHHHHHHHHHHhccCCC---CCceeEEEEEEeC-
Q 040641 187 LVDIL-EDGGFGTVYKATLP-------DGKTVAVKKFSQAK---TQGHRQFTAEMETLGKVKH---QNLVLLLGYCSFD- 251 (435)
Q Consensus 187 ~~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~- 251 (435)
..+.| +.|....+|+.... +++.+++|...... ......+.+|+.+++.+.. -.+.++++++...
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 34667 88999999998754 25678888765432 1012356788888887742 3466788887654
Q ss_pred --CeeEEEEecccCCCHHHHHHhhCC--CCCCCCHHHHHHHHHHhhhccceeec
Q 040641 252 --EEKLLVYEYMVNGSLDLWLRNATG--SHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 252 --~~~~lv~ey~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
+..++||||++|..+.+.+..... ....++..++..++.++++.|+-||+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~ 157 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHS 157 (357)
T ss_dssp TTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 356899999998776432211000 00124556667788889999999996
No 429
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=95.31 E-value=0.016 Score=54.56 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=68.8
Q ss_pred ceeeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCC--ceeEEEEEEeC-CeeEEEEeccc
Q 040641 186 TLVDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQN--LVLLLGYCSFD-EEKLLVYEYMV 262 (435)
Q Consensus 186 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~-~~~~lv~ey~~ 262 (435)
.-.+.++.|....+|+... +++.+++|..... ..+.+|..++..+.... +.++++++... +..++||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456689999999999875 4778889877432 25788888888876533 45677777654 66899999999
Q ss_pred CCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 263 NGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 263 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
|..+.+ ++...+..++.++++.|+-||+
T Consensus 118 G~~l~~-----------l~~~~~~~~~~~lg~~La~LH~ 145 (362)
T 3ovc_A 118 GVTLQD-----------LPETELPAVLQPVAEAMDAIAA 145 (362)
T ss_dssp SEETTT-----------SCGGGSGGGHHHHHHHHHHHHH
T ss_pred CCCccc-----------CCHHHHHHHHHHHHHHHHHHhc
Confidence 876532 1222233455667777777775
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.16 E-value=0.0029 Score=53.70 Aligned_cols=89 Identities=10% Similarity=0.061 Sum_probs=63.3
Q ss_pred ccCCCCCCeeecCCCccccc----CCcccCCCCCCcEEECCCCcCccC----CCcCccCCCCCCeEECcCcc---cCC--
Q 040641 9 FGDSLKLQGLYLGNNQLTGS----IPRSLGQLGGLVKLNLTRNKFSGP----VPTSLGNLKGLSHLDLSSNF---FDG-- 75 (435)
Q Consensus 9 ~~~l~~L~~L~l~~n~l~g~----~p~~~~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~l~~n~---l~~-- 75 (435)
+..-+.|+.|+|++|++... +...+..-+.|+.|+|++|.++.. +-..+..-+.|+.|+|++|. +..
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 55678999999999998743 334555678899999999999742 33345555679999998753 332
Q ss_pred --cCCCcCCCCCCCCEEeCCCCCC
Q 040641 76 --GWPRSLGNLSYSTYLDLHDNKF 97 (435)
Q Consensus 76 --~~p~~~~~l~~L~~L~l~~n~~ 97 (435)
.+-..+..=+.|+.|+++.|..
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHhCCCcCeEeccCCCc
Confidence 1233344457889999987765
No 431
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.97 E-value=0.14 Score=48.20 Aligned_cols=85 Identities=12% Similarity=0.033 Sum_probs=33.2
Q ss_pred ccCCCCCCcEEECCCCcCccCCCcCccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCCCCCCcccCCccccCcCCC
Q 040641 32 SLGQLGGLVKLNLTRNKFSGPVPTSLGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLHDNKFTREIPQNLGNLAQL 111 (435)
Q Consensus 32 ~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L 111 (435)
.+....+|+.+.+..+ +...-...+..+..|+.+.+..+ ++..-...+.++..|+.+.+..+ ++..-...|.++.+|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3344444444444333 21112223444444555544433 22111223444444555444332 221112234444455
Q ss_pred CcccccCC
Q 040641 112 EHLDVLRN 119 (435)
Q Consensus 112 ~~l~l~~n 119 (435)
+.+.+..+
T Consensus 289 ~~i~l~~~ 296 (379)
T 4h09_A 289 TKVVMDNS 296 (379)
T ss_dssp CEEEECCT
T ss_pred cccccccc
Confidence 55444443
No 432
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=94.36 E-value=0.043 Score=52.21 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=49.2
Q ss_pred eeeecccCcceEEEEEcC-CCCEEEEEEcccccc-------ccHHHHHHHHHHhccCCC--CCc-eeEEEEEEeCCeeEE
Q 040641 188 VDILEDGGFGTVYKATLP-DGKTVAVKKFSQAKT-------QGHRQFTAEMETLGKVKH--QNL-VLLLGYCSFDEEKLL 256 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~ni-v~l~g~~~~~~~~~l 256 (435)
.+.+|.|.++.||++... +++.++||....... .....+..|.++++.+.. |.. .+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999764 467899997643211 123456778888877632 333 355544 3456789
Q ss_pred EEecccCC
Q 040641 257 VYEYMVNG 264 (435)
Q Consensus 257 v~ey~~~g 264 (435)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 433
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=92.18 E-value=0.62 Score=39.84 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=50.2
Q ss_pred CHHHHHHhhCCCCCCCCHHHHHHHHHHhhhcccee-----eccc--ccccc-ccccCc-ccc--ccccccCCCcCCcCCC
Q 040641 265 SLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFL-----HQDF--GLARL-ISACET-HVS--TDIAGTLGYIPPEYGQ 333 (435)
Q Consensus 265 ~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yL-----H~Df--Gla~~-~~~~~~-~~~--~~~~gt~~y~aPE~~~ 333 (435)
+|.++|.... .++++.+.+.++.|.+++|.-+ +..+ +...+ +..+.. ... ........+.|||...
T Consensus 34 SL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~pe~~~ 110 (229)
T 2yle_A 34 SLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAGKLGY 110 (229)
T ss_dssp EHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECCC------------CCSS
T ss_pred cHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecccccccccccCCCChhhcc
Confidence 6889887653 4699999999999988876443 1000 00000 000000 000 0001123467888763
Q ss_pred CCCCCCcccchhHHHHHHHHHhCCCCC
Q 040641 334 SRMSTTRGDVYSFGVILLELVTAKEPT 360 (435)
Q Consensus 334 ~~~~~~k~DV~SfGvil~El~tg~~p~ 360 (435)
...+.+.=|||+|+++|..+-...|.
T Consensus 111 -~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 111 -SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp -SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred -ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 34467788999999999999877664
No 434
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=91.67 E-value=0.017 Score=56.26 Aligned_cols=62 Identities=5% Similarity=0.001 Sum_probs=18.5
Q ss_pred ceeeeecccCcceEEEEEcCC-CCEEEE------EEccccc--cccHHHHHHHHHHhccCCCCCceeEEEEEEe
Q 040641 186 TLVDILEDGGFGTVYKATLPD-GKTVAV------KKFSQAK--TQGHRQFTAEMETLGKVKHQNLVLLLGYCSF 250 (435)
Q Consensus 186 ~~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 250 (435)
.+.+.+| ||.||+|.+.. ..+||| |..+... .+....|.+|..++..++|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 3455566 99999998864 357888 7665322 2234578899999999999999999887643
No 435
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=84.59 E-value=1.7 Score=41.38 Aligned_cols=80 Identities=14% Similarity=0.155 Sum_probs=48.0
Q ss_pred eeeecccCcceEEEEEcCCCCEEEEEEccc-------c-c-cccHHHHHHHHHHhc-cCCCCCceeEEEEEEeCCeeEEE
Q 040641 188 VDILEDGGFGTVYKATLPDGKTVAVKKFSQ-------A-K-TQGHRQFTAEMETLG-KVKHQNLVLLLGYCSFDEEKLLV 257 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------~-~-~~~~~~~~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lv 257 (435)
.+.+|.|..+.||++.. +++.++||.... . . ......+..|+..+. ...+..+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 46689999999999975 467899994321 1 0 012233444443322 22234566666665 5678999
Q ss_pred Eecc-cCC-CHHHHH
Q 040641 258 YEYM-VNG-SLDLWL 270 (435)
Q Consensus 258 ~ey~-~~g-~L~~~l 270 (435)
|||+ ++. .+...+
T Consensus 116 ~e~l~~g~~~l~~~l 130 (420)
T 2pyw_A 116 MRYLEPPHIILRKGL 130 (420)
T ss_dssp ECCCCTTCEEHHHHH
T ss_pred EeecCCcchhHHHHH
Confidence 9999 773 444444
No 436
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=84.50 E-value=1 Score=41.14 Aligned_cols=73 Identities=14% Similarity=0.318 Sum_probs=41.2
Q ss_pred eeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccC-----CCCCceeEE-E--EEEeCCeeEEEEec
Q 040641 189 DILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKV-----KHQNLVLLL-G--YCSFDEEKLLVYEY 260 (435)
Q Consensus 189 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lv~ey 260 (435)
+.++.|..+.||+....+| .+++|...... .....|..++..+ ..|.++... | +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999987654 58899886521 2233444444433 234444311 1 12346678999999
Q ss_pred ccCCCH
Q 040641 261 MVNGSL 266 (435)
Q Consensus 261 ~~~g~L 266 (435)
++|..+
T Consensus 113 i~G~~~ 118 (346)
T 2q83_A 113 IEGRPF 118 (346)
T ss_dssp CCCBCC
T ss_pred ecCccC
Confidence 998653
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=83.86 E-value=0.62 Score=44.67 Aligned_cols=96 Identities=19% Similarity=0.262 Sum_probs=61.2
Q ss_pred eeeecccCcceEEEEEcCC--------CCEEEEEEccccccccHHHHHHHHHHhccCCCCCc-eeEEEEEEeCCeeEEEE
Q 040641 188 VDILEDGGFGTVYKATLPD--------GKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNL-VLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~ 258 (435)
.+.++.|....||++...+ ++.+.+|...... ....+.+|..++..+...++ .++++.+. + .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 4567888889999998753 4788888874321 11456689988887754444 56676653 2 3899
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
||++|.++.. ....+ ..++.++|+.|+-||.
T Consensus 152 e~l~G~~l~~--------~~l~~----~~~~~~ia~~La~LH~ 182 (429)
T 1nw1_A 152 EYIPSRPLSC--------HEISL----AHMSTKIAKRVAKVHQ 182 (429)
T ss_dssp CCCCEEECCT--------TGGGS----HHHHHHHHHHHHHHTT
T ss_pred EEeCCcccCh--------hhcCC----HHHHHHHHHHHHHHhC
Confidence 9998655421 00111 1346677777888886
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=81.32 E-value=0.89 Score=42.73 Aligned_cols=96 Identities=18% Similarity=0.236 Sum_probs=55.8
Q ss_pred eeecccCcceEEEEEcCC--------CCEEEEEEccccccccHHHHHHHHHHhccCCCCCc-eeEEEEEEeCCeeEEEEe
Q 040641 189 DILEDGGFGTVYKATLPD--------GKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNL-VLLLGYCSFDEEKLLVYE 259 (435)
Q Consensus 189 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~e 259 (435)
+.+..|-...+|++...+ ++.+.+|+... .......+.+|.++++.+.-.++ .++++++.. .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 456678888999998752 46888888633 22334566789998877743233 456666542 39999
Q ss_pred cccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 260 YMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 260 y~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
|++|..|.. . .+.. -.+...+|+.|+-||+
T Consensus 131 ~i~G~~l~~---~------~l~~---p~~~~~ia~~La~LH~ 160 (379)
T 3feg_A 131 YIPSRPLKT---Q------ELRE---PVLSAAIATKMAQFHG 160 (379)
T ss_dssp CCSEEECCG---G------GGGC---HHHHHHHHHHHHHHHT
T ss_pred EecCccCCh---h------HhCC---HHHHHHHHHHHHHHhC
Confidence 999865421 0 0111 1345567777777776
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=75.29 E-value=2 Score=41.51 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=59.9
Q ss_pred eeeecccCcceEEEEEcCC-CCEEEEEEccccccccHHHHHHHHHHhccCCCCCc-eeEEEEEEeCCeeEEEEecccCCC
Q 040641 188 VDILEDGGFGTVYKATLPD-GKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNL-VLLLGYCSFDEEKLLVYEYMVNGS 265 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~ey~~~g~ 265 (435)
.+.|+.|-...+|+....+ +..+.+|...... ...-.-.+|..++..+...++ .++++++. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3567888889999998765 4678888764322 111112478888888865555 46777662 2 35999999755
Q ss_pred HHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 266 LDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 266 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
|.. ....+ -.++.++|+.|+-||+
T Consensus 188 l~~--------~~l~~----~~~~~~ia~~La~LH~ 211 (458)
T 2qg7_A 188 LSR--------EDIKN----PKFQKLIAKNLKLLHD 211 (458)
T ss_dssp CCT--------TTTTS----HHHHHHHHHHHHHHHT
T ss_pred CCh--------hhcCC----HHHHHHHHHHHHHHhc
Confidence 421 11111 1356777888888886
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=75.02 E-value=7.5 Score=35.32 Aligned_cols=99 Identities=11% Similarity=0.085 Sum_probs=50.4
Q ss_pred eecccCcce-EEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCC--CCceeEEEEEEeCCeeEEEEecccCCCH
Q 040641 190 ILEDGGFGT-VYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKH--QNLVLLLGYCSFDEEKLLVYEYMVNGSL 266 (435)
Q Consensus 190 ~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~~g~L 266 (435)
.++.|+... +|+....+++.+++|........ .+..|+.++..+.. -.+.+++.+.... -++|||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~~---~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEGG---DTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTTC---CSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCCc---cccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 455554444 67777644677777765432211 23345555555432 2345566664333 3789999988888
Q ss_pred HHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 267 DLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 267 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
.+++.... ... ...+.++++.|+-||.
T Consensus 100 ~~~l~~~~-----~~~---~~~~~~~~~~La~lH~ 126 (333)
T 3csv_A 100 TEVINNDP-----AQE---MPLYRAAVDLLIHLHD 126 (333)
T ss_dssp HHHHHHCG-----GGH---HHHHHHHHHHHHHHHT
T ss_pred HHHhcCCC-----ccH---HHHHHHHHHHHHHHhc
Confidence 77775421 111 2344555555666664
No 441
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=74.94 E-value=6.1 Score=35.76 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=47.2
Q ss_pred eecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCC--CceeEEEE-----EEeCCeeEEEEeccc
Q 040641 190 ILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQ--NLVLLLGY-----CSFDEEKLLVYEYMV 262 (435)
Q Consensus 190 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~-----~~~~~~~~lv~ey~~ 262 (435)
.++ |....||+....+|+.+++|...... .....+..|..++..+... .+.+++.. ....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 455 77889999887777789999986321 1234566677777665321 23334332 223456688999998
Q ss_pred CCC
Q 040641 263 NGS 265 (435)
Q Consensus 263 ~g~ 265 (435)
|..
T Consensus 111 G~~ 113 (328)
T 1zyl_A 111 GRQ 113 (328)
T ss_dssp CEE
T ss_pred CCC
Confidence 754
No 442
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=59.10 E-value=5.4 Score=37.98 Aligned_cols=97 Identities=11% Similarity=0.167 Sum_probs=58.1
Q ss_pred eeeecccCcceEEEEEcCC--------CCEEEEEEccccccccHHHHHHHHHHhccCCCCCc-eeEEEEEEeCCeeEEEE
Q 040641 188 VDILEDGGFGTVYKATLPD--------GKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNL-VLLLGYCSFDEEKLLVY 258 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~ 258 (435)
.+.+..|-...+|+....+ ++.+.+|...... ...-+-.+|.++++.+.-.++ .++++.+ . -++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence 3456678888999998753 5788888864422 111123467777777643233 4555533 2 37899
Q ss_pred ecccCCCHHHHHHhhCCCCCCCCHHHHHHHHHHhhhccceeec
Q 040641 259 EYMVNGSLDLWLRNATGSHEVLDRAKRYKIACSSARGLAFLHQ 301 (435)
Q Consensus 259 ey~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~ 301 (435)
||++|..|.. . .+. .-.++.++|+.|+-||+
T Consensus 150 efI~G~~l~~--------~-~l~---~~~~~~~ia~~La~LH~ 180 (424)
T 3mes_A 150 EFIDGEPLTT--------K-QLQ---LTHICVEVAKNMGSLHI 180 (424)
T ss_dssp ECCCSEECCT--------G-GGG---SHHHHHHHHHHHHHHHT
T ss_pred EEeCCccCCh--------h-hcC---CHHHHHHHHHHHHHHhc
Confidence 9999865421 0 011 11356677777888886
No 443
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=57.76 E-value=7.5 Score=35.04 Aligned_cols=75 Identities=3% Similarity=0.007 Sum_probs=42.5
Q ss_pred eeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCC-----CCCceeEE-E--EEEeCCeeEEEEe
Q 040641 188 VDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK-----HQNLVLLL-G--YCSFDEEKLLVYE 259 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-g--~~~~~~~~~lv~e 259 (435)
.+.++.|....+|+....+| .+++|....... ...+..|+.++..+. -|.++... | +....+..+++||
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~--~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE--KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCCCC--HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 45677888899999987655 678888765211 123455666665553 23333210 1 1123456789999
Q ss_pred cccCCC
Q 040641 260 YMVNGS 265 (435)
Q Consensus 260 y~~~g~ 265 (435)
|++|..
T Consensus 104 ~l~G~~ 109 (322)
T 2ppq_A 104 FLEGMW 109 (322)
T ss_dssp CCCCBC
T ss_pred eCCCcC
Confidence 999865
No 444
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=56.48 E-value=6.6 Score=35.14 Aligned_cols=71 Identities=10% Similarity=0.040 Sum_probs=43.0
Q ss_pred eeeecccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCCCCCc-eeEEEEEEeCCeeEEEEecc-cCCC
Q 040641 188 VDILEDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNL-VLLLGYCSFDEEKLLVYEYM-VNGS 265 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~ey~-~~g~ 265 (435)
.+.++.|....+|+. +.+++|........ .....+|..+++.+....+ .+++++ ..+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 567888999999998 45888877543211 1122457777766543233 345544 344567999999 5544
Q ss_pred H
Q 040641 266 L 266 (435)
Q Consensus 266 L 266 (435)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 445
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=50.71 E-value=13 Score=34.27 Aligned_cols=73 Identities=12% Similarity=0.168 Sum_probs=43.1
Q ss_pred eeeecccCcceEEEEEcCC---------CCEEEEEEccccccccHHHHHHHHHHhccCCCCCc-eeEEEEEEeCCeeEEE
Q 040641 188 VDILEDGGFGTVYKATLPD---------GKTVAVKKFSQAKTQGHRQFTAEMETLGKVKHQNL-VLLLGYCSFDEEKLLV 257 (435)
Q Consensus 188 ~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv 257 (435)
.+.++.|....+|+....+ ++.+++|....... .......|.+++..+...++ .++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 3456788888999998654 26788887754321 11123567777777643343 3666543 2 3789
Q ss_pred EecccCCC
Q 040641 258 YEYMVNGS 265 (435)
Q Consensus 258 ~ey~~~g~ 265 (435)
|||++|..
T Consensus 113 ~e~i~G~~ 120 (369)
T 3c5i_A 113 EEWLYGDP 120 (369)
T ss_dssp EECCCSEE
T ss_pred EEEecCCc
Confidence 99998754
No 446
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=40.27 E-value=58 Score=29.46 Aligned_cols=68 Identities=7% Similarity=0.096 Sum_probs=41.0
Q ss_pred cccCcceEEEEEcCCCCEEEEEEccccccccHHHHHHHHHHhccCC---CCCceeEEEE------EEeCCeeEEEEeccc
Q 040641 192 EDGGFGTVYKATLPDGKTVAVKKFSQAKTQGHRQFTAEMETLGKVK---HQNLVLLLGY------CSFDEEKLLVYEYMV 262 (435)
Q Consensus 192 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~------~~~~~~~~lv~ey~~ 262 (435)
|.|....||+....+| .+++|....... ..|+.++..+. -|++.+.+.. ....+..++||||++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3344679999987767 899998754332 23444443332 1223343322 233567899999999
Q ss_pred CCCH
Q 040641 263 NGSL 266 (435)
Q Consensus 263 ~g~L 266 (435)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8764
No 447
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=36.49 E-value=17 Score=34.23 Aligned_cols=74 Identities=14% Similarity=0.250 Sum_probs=44.3
Q ss_pred eeecccCcceEEEEEcCC--------CCEEEEEEccccccc-----------cH-------HHHHHHHHHhccCCCCCc-
Q 040641 189 DILEDGGFGTVYKATLPD--------GKTVAVKKFSQAKTQ-----------GH-------RQFTAEMETLGKVKHQNL- 241 (435)
Q Consensus 189 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~~-------~~~~~E~~~l~~l~H~ni- 241 (435)
+.+..|-...+|++..++ ++.|.++........ ++ .....|..+++.+...++
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 345567778899988754 357878776432110 01 123358888877754333
Q ss_pred eeEEEEEEeCCeeEEEEecccCCCH
Q 040641 242 VLLLGYCSFDEEKLLVYEYMVNGSL 266 (435)
Q Consensus 242 v~l~g~~~~~~~~~lv~ey~~~g~L 266 (435)
.++++++.. .+|+||+++-+|
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L 158 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRL 158 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEEC
T ss_pred CeEEEEeCC----CeEEEecCCccC
Confidence 466776532 299999997554
No 448
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=21.05 E-value=2.3e+02 Score=20.19 Aligned_cols=36 Identities=8% Similarity=0.023 Sum_probs=15.1
Q ss_pred ccCCCCCCeEECcCcccCCcCCCcCCCCCCCCEEeCC
Q 040641 57 LGNLKGLSHLDLSSNFFDGGWPRSLGNLSYSTYLDLH 93 (435)
Q Consensus 57 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 93 (435)
|.+|.+|+.+.+..+ ++..-...|.+|.+|+.+.+.
T Consensus 16 F~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 16 FAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp TTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred hcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 444444544444432 121112244445555555443
Done!