BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040642
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana
GN=AGL80 PE=1 SV=1
Length = 321
Score = 200 bits (508), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 127/161 (78%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
MTRKKVKLAYISNDS+RKATFKKRKKGL+KKV EL TLCGI CAII+SPYD PE+WPS
Sbjct: 1 MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQS 120
GVQRV+S F+ +PEM++ KKMV Q+ FL+QRIAKA E L++QRKD+RE EM VMFQ
Sbjct: 61 NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120
Query: 121 LTGSNVFLNMNMIGLNDLGLQIEHNIREICRRMETLNNIAT 161
L G+ ++N++ LNDLG IE ++++ RR+E L N T
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGT 161
>sp|O80805|PHE1_ARATH MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana
GN=PHE1 PE=1 SV=1
Length = 279
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 124/197 (62%), Gaps = 7/197 (3%)
Query: 3 RKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPSPL 62
R K+KL++I NDS RK TF KRKKG+LKK +EL TLCG+D CA+I SPY+ E WPS
Sbjct: 2 RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61
Query: 63 GVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQSLT 122
GV+ V+S+F + ++++KKMV Q++FLRQRIAK E+L+K R +NR ++ +MF L
Sbjct: 62 GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121
Query: 123 GSNVFLNMNMIGLNDLGLQIEHNIREICRRMETL----NNIATMARPSNEEPSQQVEKS- 177
G +++ L DL + + + + RR+E L + +++ P P+ V+ S
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPPIGVAPT-VVDASV 180
Query: 178 -FGFDGQMNMEAMQKQQ 193
GFDG+M + Q QQ
Sbjct: 181 PIGFDGRMIQDQNQNQQ 197
>sp|Q7XJK8|PHE2_ARATH MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana
GN=PHE2 PE=1 SV=1
Length = 278
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 125/218 (57%), Gaps = 14/218 (6%)
Query: 3 RKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPSPL 62
++K+KL+ I N +RK TF KRKKG+ KK++EL TLCG++ CA+++SP++ PE WPS
Sbjct: 2 KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61
Query: 63 GVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQSLT 122
GV+ V+S+F ++ ++++KKMV Q++F+ QRIAK EQL+K R +N ++ +MF L
Sbjct: 62 GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121
Query: 123 GSNVFLNMNMIGLNDLGLQIEHNIREICRRMETLNNIATMARPSNEEPSQQVEKS---FG 179
G N++ L DL L I+ + + RR+E L S+ P V + G
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEIL---IENGESSSSLPLPIVANAAAPVG 178
Query: 180 FDGQMNMEAMQKQ--------QWLVDLMSTPPQQHFGF 209
FDG M Q Q Q L D P++ GF
Sbjct: 179 FDGPMFQYHNQNQQKPVQFQYQALYDFYDQIPKKIHGF 216
>sp|Q7XJK6|AGL36_ARATH Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana
GN=AGL36 PE=1 SV=1
Length = 366
Score = 130 bits (326), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%)
Query: 4 KKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPSPLG 63
KKVKL+ I+N+ +RK +F KRK G+ KK+ EL TLCG+ CA+I+SP+ PE WPS G
Sbjct: 2 KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61
Query: 64 VQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQSLTG 123
++V SRF +MP ++KKM+ Q+++L +RI KA EQLK +NRE ++ R MF + G
Sbjct: 62 AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121
Query: 124 SNVFLNMNMIGLNDLGLQIEHNIREICRRMETL 156
+ + L DL I + ++ R+E++
Sbjct: 122 KMSQYHYDAKDLQDLQSCINLYLDQLNGRIESI 154
>sp|Q9C6V3|AGL86_ARATH Agamous-like MADS-box protein AGL86 OS=Arabidopsis thaliana
GN=AGL86 PE=1 SV=1
Length = 339
Score = 127 bits (319), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 1/156 (0%)
Query: 3 RKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPSPL 62
R K+KL+ I+N ++R+ TF+KRK G+ K+ EL TLCG+ CA+I SPY++ P +WPS
Sbjct: 2 RSKIKLSLIANKTSRRTTFRKRKGGITNKLHELTTLCGVKACAVISSPYEN-PVVWPSTE 60
Query: 63 GVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQSLT 122
GVQ +S F + P E+SK M+S +++L+ +I K ++L+ R++NRE ++ + MF +
Sbjct: 61 GVQEAVSMFMERPATEQSKLMMSHETYLQDKITKETKKLESLRRENRESQLRQFMFDCVE 120
Query: 123 GSNVFLNMNMIGLNDLGLQIEHNIREICRRMETLNN 158
G L DL L I+H I ++ + L N
Sbjct: 121 GKMSEHQYGARDLQDLSLYIDHYINQLNSSVMLLTN 156
>sp|Q7XJK5|AGL90_ARATH Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana
GN=AGL90 PE=1 SV=2
Length = 320
Score = 124 bits (310), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 83/120 (69%)
Query: 4 KKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPSPLG 63
KKVKL+ I+N+ +RK +F KRK G+ KK+ EL TLCG+ CA+I+SP+ PE WPS G
Sbjct: 2 KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61
Query: 64 VQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQSLTG 123
++V S+F +MP +++KM+ Q++ L +RI KA EQLK +NRE ++ R MF + G
Sbjct: 62 AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121
>sp|Q9C6V4|AGL92_ARATH Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana
GN=AGL92 PE=1 SV=1
Length = 464
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Query: 3 RKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPSPL 62
R K KL I + R+ATF+KR G+ KK+ EL TLC I CA+I+SP+++ P +WPS
Sbjct: 2 RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFEN-PTVWPSTE 60
Query: 63 GVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQSLT 122
GVQ V+S F + P E+SK M+S ++FLR +I K +L+ R++NRE +++ MF +
Sbjct: 61 GVQEVISEFMEKPATERSKTMMSHETFLRDQITKEQNKLESLRRENRETQLKHFMFDCVG 120
Query: 123 GSNVFLNMNMIGLNDLGLQIEHNIREICRRMETL 156
G L DL L + + ++ R + L
Sbjct: 121 GKMSEQQYGARDLQDLSLFTDQYLNQLNARKKFL 154
>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
GN=MADS20 PE=2 SV=2
Length = 233
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 21/135 (15%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R KV++ I N+ +R+ TF KR+ GLLKK E+ LC +DV AI+FS + S
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 PLGVQRVLSRFKK-------------MPEMEKSKKMVSQDSF-LRQRIAKAYEQLKKQRK 106
++R+L ++ + PE+E S +S D LR RI E LKK ++
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGS---MSYDHIKLRGRI----EALKKSQR 113
Query: 107 DNREKEMERVMFQSL 121
+ +E++ + Q +
Sbjct: 114 NLMGQELDSLTLQDI 128
>sp|Q8RVL4|DEF21_ANTMA MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1
Length = 247
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 31/247 (12%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K+++ I N+++R+ TF KR+ GL+KK EL LC + I+FS E
Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTP 60
Query: 61 PLGVQRVLSRFKK----MPEME-KSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREK--EM 113
P +++++ R+ K +PEME ++ D +++ E L Q R K ++
Sbjct: 61 PFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDL 120
Query: 114 ERVMFQSLTGSNVFLNMNMIGLNDLGLQIEHNIREICRRMETLNNIATMARPSNEE---- 169
V F+ LT L+ ++ + L++ H +ME L M N+E
Sbjct: 121 STVRFEELTELEKLLDQSLNKVRARKLELLH------EQMENLKRTEFMLEKENQEMYHW 174
Query: 170 -PSQQVEKSFGFDGQMNMEAMQKQQWLVDLMSTPPQQ----HFGFGGEEV---MQPFADT 221
S Q+++ Q +E +QQ + +L QQ F F GE++ P DT
Sbjct: 175 LMSNQIQR------QAEVEHHHQQQVMTELKLVEQQQPLMNEFPFFGEDLHLGTLPLLDT 228
Query: 222 INNNLWP 228
+ L P
Sbjct: 229 HSYRLQP 235
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 32/242 (13%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K+++ I N ++R+ TF KR+ GLLKK EL LC + IIFS E
Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQ 63
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQS 120
P + +++SR+ + + +D+ R+ + Y+++ K R+D ++ Q
Sbjct: 64 PHSMSQIISRYLQT----TGASLPVEDN----RV-QLYDEVAKMRRDTLNLQLS---LQR 111
Query: 121 LTGSNVFLNMNMIGLNDLGLQIEHNIREICRR--------METLNNIATMARPSNEEPSQ 172
G ++ L LN+L Q+EH + +I R ME L M N + Q
Sbjct: 112 YKGDDLSL-AQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQ 170
Query: 173 QV-------EKSFGFDGQMNMEAMQKQQWLVD---LMSTPPQQHFGFGGEEVMQPFADTI 222
+ ++S D + + + QQ + + L P HF F G++ QP T+
Sbjct: 171 WLMNNQMYKQESAAMDHEDHHHHHEHQQAITELNLLGEQPLLSHFTFFGDQE-QPSTSTV 229
Query: 223 NN 224
N+
Sbjct: 230 NH 231
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 20/153 (13%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R + +L I N ++R+ TF KR+ GLLKK EL LC +V I+FSP E +
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQ------RIAKAYEQLKKQRKDNREKEME 114
P +Q+ + R+K + + K + QD ++Q +AK E L + R+ + +E
Sbjct: 61 P-SLQKTIDRYKAYTKDHVNNKTIQQD--IQQVKDDTLGLAKKLEALDESRRKILGENLE 117
Query: 115 RVMFQSLTGSNVFLNMNMIGLNDLGLQIEHNIR 147
+ L G + L ++ HNIR
Sbjct: 118 GCSIEELRGLEMKLEKSL-----------HNIR 139
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R + +L I N ++R+ TF KR+ GLLKK EL LC +V I+FSP E +
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQD 87
P +Q+ + R+K + + K + QD
Sbjct: 61 P-SLQKTIDRYKAYTKDHVNNKTIQQD 86
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana
GN=AGL3 PE=2 SV=2
Length = 258
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R KV+L I N R+ TF KR+ GLLKK EL LC ++ +IFS E S
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 61 PLGVQRVLSRFKK 73
P G+ R + +++K
Sbjct: 61 PSGMARTVDKYRK 73
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K+ + I + ++R+ TF KR+KGL+KK EL LC +VC IIFS D + S
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60
Query: 61 PLGVQRVLSRFK--KMPEME 78
V+ + RF KM E E
Sbjct: 61 S--VKSTIERFNTAKMEEQE 78
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R KV+L I N R+ TF KR+ GLLKK E+ LC +V AI+FSP E + +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYE-YAT 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLK 102
+ ++L R+++ EK+ ++S +S Y +LK
Sbjct: 60 DSRMDKILERYERYSYAEKA--LISAESESEGNWCHEYRKLK 99
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R KV++ I N R+ TF KRK GLLKK EL LC +V IIFS E S
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF--S 58
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAK---AYEQLKKQRKDNREKEMERVM 117
+GV R + R+ + + + LRQ + K YE L + ++ +++E +
Sbjct: 59 NVGVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMS 118
Query: 118 FQSL 121
+ L
Sbjct: 119 IKEL 122
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R+K+++ I N +AR+ TF KR++GL KK EL LC DV IIFS E S
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
Query: 61 PLGVQRVLSRF 71
+ + VL R
Sbjct: 61 SM--KEVLERH 69
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 3 RKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPSPL 62
R+K+ + I +S R+ TF KR+ GL KK SEL TLCG ++ I+FSP +P + P
Sbjct: 64 RQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSP-AKKPFSFGHP- 121
Query: 63 GVQRVLSRF 71
V+ VL R+
Sbjct: 122 SVESVLDRY 130
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFS 49
M R+K+++ I N +AR+ TF KR++GL KK EL LC DV IIFS
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFS 49
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K+++ I N + R+ TF KR+ GLLKK EL LC ++ IIFS E +
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNR--EKEMERVMF 118
+++++ R++K+ ++ D+ Y ++ + + +N + + R+M
Sbjct: 61 SSSMKKIIERYQKV----SGARITEYDN------QHLYCEMTRMKNENEKLQTNIRRMMG 110
Query: 119 QSLTGSNVFLNMNMIGLNDLGLQIE 143
+ LT ++ M L+ LG Q+E
Sbjct: 111 EDLT------SLTMTELHHLGQQLE 129
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K ++ I N ++R+ TF KR+ GLLKK EL LC +V I+FSP E +
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQD 87
Q+ + R++ + K V QD
Sbjct: 61 --STQKTIERYRTYTKENIGNKTVQQD 85
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K ++ I N ++R+ TF KR+ GLLKK EL LC +V IIFSP E + S
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYE-FSS 59
Query: 61 PLGVQRVLSRFKK 73
+ + + R++K
Sbjct: 60 SSSIPKTVERYQK 72
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 3 RKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSP 50
R+K+++ + N+S + TF KR+ GL KK SEL TLCG +V ++FSP
Sbjct: 8 RQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSP 55
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K ++ I N ++R+ TF KR+ GLLKK EL LC +V +IFSP E S
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60
Query: 61 PLG--VQRVLSRFKKM 74
+ ++R R K++
Sbjct: 61 SIAATIERYQRRIKEI 76
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K+++ I N ++R+ TF KR+ GLLKK EL LC +V I+FS E S
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY--S 58
Query: 61 PLGVQRVLSRF 71
G+++ LSR+
Sbjct: 59 STGMKQTLSRY 69
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V+L I N R+ TF KR+ GLLKK E+ LC +V I+FS E + S
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAQEISVLCDAEVSLIVFSHKGKLFE-YTS 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFL 90
+++VL R+++ E +++++ DS +
Sbjct: 60 ESCMEKVLERYERYSYAE--RQLIAPDSHI 87
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K+ + I + ++R+ TF KR+KGL+KK EL LC +V IIFS + S
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
Query: 61 PLGVQRVLSRFKKMPEMEKSKKM--VSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMF 118
+ + V+ R+ K ++E+ + + S+ F ++ A ++L ++++R+ +M
Sbjct: 61 SM--KSVIDRYNK-SKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQ-----MMG 112
Query: 119 QSLTGSNVFLNMNMIGLNDLGLQIEHNIREICRRMETL 156
+ L G L++N LN L QIE ++R I R E L
Sbjct: 113 EQLNG----LSVN--ELNSLENQIEISLRGIRMRKEQL 144
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSP 50
M R+K+++ I N +AR+ TF KR++G+ KK EL LC DV IIFS
Sbjct: 1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSA 50
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R KV+L I N R+ TF KR+ GLLKK +E+ LC +V IIFS E + +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYE-YAT 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLK 102
+ ++L R+++ EK ++S +S + Y +LK
Sbjct: 60 DSCMDKILERYERYSYAEKV--LISAESDTQGNWCHEYRKLK 99
>sp|Q55F37|SRFC_DICDI Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3
SV=1
Length = 1050
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFS 49
M R K+ + ISN+ R+ATF KRK GL+KK EL LC ++ I+FS
Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFS 51
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSP----YDDQPE 56
M R K+ + I N ++R+ TF KR+ GLLKK EL LC +V IIFS YD
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYD---- 56
Query: 57 IWPSPLGVQRVLSRFKKMPE 76
+ S ++ ++ R+ ++ E
Sbjct: 57 -YASNSSMKTIIERYNRVKE 75
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K ++ I N ++R+ TF KR+ GLLKK EL LC +V IIFSP E S
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSF 89
+ Q + R+ + + S K VS+++
Sbjct: 61 NM--QDTIDRYLRHTKDRVSTKPVSEENM 87
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V+L I N R+ TF KR+ GLLKK E+ LC +V I+FS E + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFE-YSS 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFL 90
+++VL R+++ E +++++ DS +
Sbjct: 60 ESCMEKVLERYERYSYAE--RQLIAPDSHV 87
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSP 50
M R K+ + I+N ++R+ TF KR+ GLLKK EL LC +V IIFS
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSS 50
>sp|Q84NC2|MAD31_ORYSJ MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica
GN=MADS31 PE=2 SV=1
Length = 178
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V+L I N + R+ TF KR+ GLLKK +EL LC + I+FS E
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 PLGVQRVLSRFKKMP-----EMEKSKKMVSQ 86
P + + R+ K P EM+ ++++ +
Sbjct: 61 PWRIANIFDRYLKAPSTRFEEMDVQQRIIQE 91
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V+L I N R+ TF KR+ GLLKK EL LC +V IIFS E S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 PLGVQRVLSRFKK----MPEMEKSKK----MVSQDSFLRQRIAKAYEQLKKQRKD 107
+ + L R++K PE S + + SQ +L ++ YE L++ +++
Sbjct: 61 S-SMLKTLERYQKCNYGAPETNISTREALEISSQQEYL--KLKARYEALQRSQRN 112
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R ++++ I N ++R+ TF KR+ GLLKK EL LC +V I+FS E + +
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE-YSN 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKKM----VSQDSFLRQRIAKAYEQLKKQRKDNREKEMERV 116
V+ + R+KK + V+ + +Q AK Q++ + N+
Sbjct: 60 NNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKH------ 113
Query: 117 MFQSLTGSNVFLNMNMIGLNDLGLQIEHNIREI-CRRMETL 156
L G NV N+++ L L ++E I +I R+ E L
Sbjct: 114 ----LVGDNVS-NLSLKELKQLESRLEKGISKIRARKNELL 149
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
+ R K+++ I N + R+ TF KR+ GLLKK EL LC +V I+FS E +
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 76
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDS--FLRQRIAKAYEQLKKQRKDNR 109
V+ + R+KK + VS+ + F +Q +K +++ +K+NR
Sbjct: 77 S--VKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNR 125
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R K+++ I N + R+ TF KR+ GLLKK +EL LC V +IFS E
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERV--MF 118
++ ++ ++ + + Q F+ ++ + R EME++
Sbjct: 61 TCSLRELIEHYQTVTNTHFEEINHDQQIFV---------EMTRMR-----NEMEKLDGGI 106
Query: 119 QSLTGSNVFLNMNMIGLNDLGLQIEHNIREI-CRRMETLN 157
+ TG ++ N+ + +NDL Q+E ++ ++ R+ + LN
Sbjct: 107 RRFTGDDLS-NLTLADINDLEQQLEFSVTKVRARKHQLLN 145
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V+L I N R+ TF KR+ GLLKK EL LC +V IIFS E +
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 PLGVQRVLSRFK 72
G+ + L R++
Sbjct: 61 --GITKTLERYQ 70
>sp|P0C5B1|MAD14_ORYSI MADS-box transcription factor 14 OS=Oryza sativa subsp. indica
GN=MADS14 PE=2 SV=1
Length = 246
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R KV+L I N R+ TF KR+ GLLKK +E+ LC +V IIFS + + +
Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYK-YAT 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLK 102
+ ++L R+++ EK ++S +S + Y +LK
Sbjct: 60 DSCMDKILERYERYSYAEKV--LISAESDTQGNWCHEYRKLK 99
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V+L I N R+ TF KR+ GLLKK EL LC +V IIFS E + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYE-FCS 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKKMVSQDSFLRQRIAKAYEQLKKQRKDNREKEMERVMFQS 120
+ R L R++K + ++++ L Q Y +LK R +N ++ ++ +
Sbjct: 60 GQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKA-RVENLQRTQRNLLGED 118
Query: 121 LTGSNVFLNMNMIGLNDLGLQIEHNIREI--CRRMETLNNIATMAR------PSNEEPSQ 172
L + + L L Q++ ++R I R L+ + + R +N+ +
Sbjct: 119 LG------TLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRR 172
Query: 173 QVEKSFGFDGQM 184
++E+S GQ+
Sbjct: 173 KLEESNQLHGQV 184
>sp|O04067|AGL9_SINAL Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba
GN=AGL9 PE=2 SV=1
Length = 254
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V+L I N R+ TF KR+ GLLKK EL LC +V IIFS E S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 PLGVQRVLSRFKK 73
+ R L R++K
Sbjct: 61 SSMI-RTLERYQK 72
>sp|Q12224|RLM1_YEAST Transcription factor RLM1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RLM1 PE=1 SV=1
Length = 676
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIF 48
M R+K+++ IS+D R TF KRK GL KK EL LC +D+ II
Sbjct: 1 MGRRKIEIQRISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIIL 48
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
chinensis GN=CAL PE=2 SV=1
Length = 254
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V++ I N R+ TF KR+ GLLKK E+ LC +V I+FS E + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFE-YSS 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKK 82
+++VL R+++ EK K
Sbjct: 60 ESCMEKVLERYERYSYAEKQLK 81
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2
SV=1
Length = 254
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V++ I N R+ TF KR+ GLLKK E+ LC +V I+FS E + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFE-YSS 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKK 82
+++VL R+++ EK K
Sbjct: 60 ESCMEKVLERYERYSYAEKQLK 81
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V+L I N R+ TF KR+ GLLKK E+ LC +V I+FS E + +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFE-YAT 59
Query: 61 PLGVQRVLSRFKKMPEMEK 79
++R+L R+++ EK
Sbjct: 60 DSCMERLLERYERYSFAEK 78
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
pekinensis GN=CAL PE=2 SV=1
Length = 254
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFSPYDDQPEIWPS 60
M R +V++ I N R+ TF KR+ GLLKK E+ LC +V I+FS E + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFE-YSS 59
Query: 61 PLGVQRVLSRFKKMPEMEKSKK 82
+++VL R+++ EK K
Sbjct: 60 ESCMEKVLERYERYSYAEKQLK 81
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 31/49 (63%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFS 49
M R KV+L I N +R+ TF KR+ GLLKK EL LC +V IIFS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFS 49
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 31/49 (63%)
Query: 1 MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELKTLCGIDVCAIIFS 49
M R KV+L I N +R+ TF KR+ GLLKK EL LC +V IIFS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFS 49
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,351,292
Number of Sequences: 539616
Number of extensions: 3432456
Number of successful extensions: 12235
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 12047
Number of HSP's gapped (non-prelim): 218
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)