BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040643
(968 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 1287 bits (3330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/991 (60%), Positives = 765/991 (77%), Gaps = 24/991 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCL-SYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSG 59
+E RGI+ N QT WLLEGCL + GSL E +K+H +ILKLG D L +K F+ YL G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 60 DLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLR 119
DL A K+FD+M +RT+F+WNK+I ++ L G V GLF++M+ ++V PNE TF GVL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 120 ACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS 179
AC G G+VA V QIH I+ G S ++ NPLIDLY++NGF+D A++VF+ L KD
Sbjct: 195 ACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGL 239
SWVAMISG S+N E EAI LFC M++LG +PTPYA SS LSAC KIE EIGEQ HGL
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 240 IFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKA 299
+ K GFSS+T+VCNALV+LY GNL SAE IFS M QRD VTYN+LI+GL+QCGY +KA
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 300 LELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDL 359
+ELF++M LD L+PD T+ASLV AC++ G G+QLH+Y K+G + + +EG++L+L
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
Y KC+D+ETA +FL TE ENVVLWNVMLVAYG L+DL SF+IF+QMQ E + PNQYTY
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 420 PTILRTCTSLGALSLGEQIHTQ----------------------LGNLNTAQEILRRLPE 457
P+IL+TC LG L LGEQIH+Q LG L+TA +IL R
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 458 DDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQI 517
DVVSWT MI G+ Q+ +AL F +M ++GI+SD +G ++A+SACAG+QAL +G+QI
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 518 HAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYC 577
HAQ+ +SGFS DL NAL++LY+RCG+I+E+YL F + +A DNI+WN L+SGF QSG
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 578 EGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSL 637
E AL+VF +M + G+ N +TFGS V AA+ AN+KQGKQVHA+I KTGYDSETE N+L
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 638 ITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNH 697
I++YAKCGSI DA+++FLE+ KNEVSWNA+I +S+HG+ EA++ F++M +V PNH
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 698 VTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTE 757
VT VGVLSACSH+GLV++G+ YFESM++EYGL PKPEHY CVVD+L RAG LSRA+EF +
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 758 QMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDC 817
+MPI+PDA+VWRTLLSAC VHKNMEIGE+AA+HLLELEPEDSATYVLLSN+YA + KWD
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 913
Query: 818 RDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGY 877
RD RQ MK++GVKKEPGQSWIEVKNSIH+F+VGD+ HPLAD+I++Y +L +R +EIGY
Sbjct: 914 RDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
Query: 878 VQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKF 937
VQ +SL ++L+ EQKDP ++IHSEKLAI+FGLLSL ++PI V+KNLRVCNDCH WIKF
Sbjct: 974 VQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKF 1033
Query: 938 VSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
VSK+SNR I+VRDA RFHHFEGG CSC+DYW
Sbjct: 1034 VSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/978 (36%), Positives = 566/978 (57%), Gaps = 40/978 (4%)
Query: 29 AKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVA 88
A+ H ++ K D + LC+ N YL +GD SA K+FD+M R SW ++SG+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 89 KKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSP 148
L M+ + + N+ FV VLRAC G+V + QIHGL+ +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 149 LISNPLIDLYAKN-GFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHI 207
++SN LI +Y K G + A F ++ K+SVSW ++IS +SQ G +R A +F M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 208 LGTVPTPYAISSALS-ACTKIEL-FEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNL 265
G+ PT Y S ++ AC+ E + EQ I K G ++ FV + LV+ +++SG+L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 266 TSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQ--LDCLKPDCVTVASLV- 322
+ A ++F++M+ R+ VT N L+ GL + + ++A +LF M +D V + S
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 323 --SACASVGAFRTGEQLHSYAIKVGISKDIIVEGS-MLDLYVKCSDVETAYKFFLTTETE 379
S VG + G ++H + I G+ ++ G+ ++++Y KC + A + F +
Sbjct: 320 EYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 380 NVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH 439
+ V WN M+ Q E+ + +K M+ + P +T + L +C SL LG+QIH
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 440 ----------------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQ-HGMF 476
+ G LN ++I +PE D VSW ++I +
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498
Query: 477 GEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNAL 536
EA+ F + G + + I FSS +SA + + G+QIH + + +D+ + NAL
Sbjct: 499 PEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENAL 558
Query: 537 ISLYARCGRIQEAYLVFNKI-DAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQAN 595
I+ Y +CG + +F+++ + +DN++WN +ISG+ + AL + M Q G + +
Sbjct: 559 IACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Query: 596 LYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFL 655
+ + +V+SA A++A +++G +VHA ++ +S+ ++L+ +Y+KCG +D A R F
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 656 EMPEKNEVSWNAMITGFSQHGYALEAINLFEKMK-KHDVMPNHVTFVGVLSACSHVGLVN 714
MP +N SWN+MI+G+++HG EA+ LFE MK P+HVTFVGVLSACSH GL+
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 715 EGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSA 774
EG ++FESMS YGL P+ EH++C+ D+LGRAG L + +F E+MP++P+ ++WRT+L A
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 775 C-RVH-KNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKK 832
C R + + E+G+ AA L +LEPE++ YVLL N+YAA G+W+ + R+ MKD VKK
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 833 EPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYV-QGRYSLWSDLEQE 891
E G SW+ +K+ +H F GD+ HP AD IY L LNR++ + GYV Q ++L+ DLEQE
Sbjct: 859 EAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALY-DLEQE 917
Query: 892 QKDPCVYIHSEKLAIAFGLLS-LSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRD 950
K+ + HSEKLA+AF L + S ++PI ++KNLRVC DCH+ K++SKI R I++RD
Sbjct: 918 NKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRD 977
Query: 951 ANRFHHFEGGVCSCRDYW 968
+NRFHHF+ G CSC D+W
Sbjct: 978 SNRFHHFQDGACSCSDFW 995
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 183/402 (45%), Gaps = 11/402 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M I S T + L C S ++IHG+ LKLG D + + +Y +G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLS-GRVLGLFLQMIDDDVIPNEATFVGVLR 119
L+ KIF M + SWN +I + S + FL N TF VL
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 120 ACIGS--GNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLC-F 176
A G + QIHGL + + N LI Y K G +D +K+F+ +
Sbjct: 526 AVSSLSFGELG----KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER 581
Query: 177 KDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQF 236
+D+V+W +MISG+ N +A+ L M G + ++ LSA + E G +
Sbjct: 582 RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
Query: 237 HGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYS 296
H + S+ V +ALV +YS+ G L A + F+ M R+ ++NS+ISG A+ G
Sbjct: 642 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQG 701
Query: 297 DKALELFEKMQLDC-LKPDCVTVASLVSACASVGAFRTG-EQLHSYAIKVGISKDIIVEG 354
++AL+LFE M+LD PD VT ++SAC+ G G + S + G++ I
Sbjct: 702 EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFS 761
Query: 355 SMLDLYVKCSDVETAYKFFLTTETE-NVVLWNVMLVAYGQLN 395
M D+ + +++ F + NV++W +L A + N
Sbjct: 762 CMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 627 bits (1618), Expect = e-178, Method: Compositional matrix adjust.
Identities = 324/830 (39%), Positives = 505/830 (60%), Gaps = 33/830 (3%)
Query: 166 SAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACT 225
+A +F+ +D S+++++ GFS++G +EA LF +H LG SS L
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 226 KI--ELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTY 283
+ ELF G Q H K+GF + V +LV Y + N ++F +M++R+ VT+
Sbjct: 105 TLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 284 NSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIK 343
+LISG A+ +D+ L LF +MQ + +P+ T A+ + A G G Q+H+ +K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 344 VGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQI 403
G+ K I V S+++LY+KC +V A F TE ++VV WN M+ Y E+ +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 404 FKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL--------GNLNTAQEI---- 451
F M+ + ++ ++ ++++ C +L L EQ+H + N+ TA +
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 452 -------LRRLPE----DDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSS 500
LR E +VVSWTAMI GF+Q+ EA++LF EM+ +G++ + +S
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 501 AISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKD 560
++A I ++HAQ + + ++G AL+ Y + G+++EA VF+ ID KD
Sbjct: 403 ILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 561 NISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSA-AANLANIKQGKQVH 619
++W+ +++G+AQ+G E A+++F ++T+ G++ N +TF S+++ AA A++ QGKQ H
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 518
Query: 620 AMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYAL 679
IK+ DS S++L+T+YAK G+I+ A+ F EK+ VSWN+MI+G++QHG A+
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 578
Query: 680 EAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACV 739
+A+++F++MKK V + VTF+GV +AC+H GLV EG +YF+ M + + P EH +C+
Sbjct: 579 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Query: 740 VDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDS 799
VDL RAG L +A + E MP + +WRT+L+ACRVHK E+G AA ++ ++PEDS
Sbjct: 639 VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 698
Query: 800 ATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLAD 859
A YVLLSN+YA +G W R ++R++M +R VKKEPG SWIEVKN ++F GDR HPL D
Sbjct: 699 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 758
Query: 860 KIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPI 919
+IY L +L+ R+ ++GY + D++ E K+ + HSE+LAIAFGL++ P+
Sbjct: 759 QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPL 818
Query: 920 LVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEG-GVCSCRDYW 968
L+IKNLRVC DCH IK ++KI R IVVRD+NRFHHF GVCSC D+W
Sbjct: 819 LIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/632 (28%), Positives = 313/632 (49%), Gaps = 39/632 (6%)
Query: 56 LTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFV 115
++S L +A +FD R S+ L+ GF + LFL + + + + F
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 116 GVLRACIGSGNVAVQCV----NQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVF 171
VL+ A C Q+H I GF + L+D Y K +KVF
Sbjct: 98 SVLKVS------ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 172 NNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFE 231
+ + ++ V+W +ISG+++N E + LF +M GT P + ++AL + +
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 232 IGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLA 291
G Q H ++ K G V N+L+ LY + GN+ A +F K + + VT+NS+ISG A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 292 QCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDII 351
G +AL +F M+L+ ++ + AS++ CA++ R EQLH +K G D
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 352 VEGSMLDLYVKCSDVETAYKFFLTTE-TENVVLWNVMLVAYGQLNDLSESFQIFKQMQTE 410
+ +++ Y KC+ + A + F NVV W M+ + Q + E+ +F +M+ +
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 411 GLTPNQYTYPTILRTCTSLGALSLGEQIHTQ----------------------LGNLNTA 448
G+ PN++TY IL T+L +S E +H Q LG + A
Sbjct: 392 GVRPNEFTYSVIL---TALPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 449 QEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGI 508
++ + + D+V+W+AM+ G+ Q G A+++F E+ GI+ + FSS ++ CA
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 509 QA-LNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGL 567
A + QG+Q H + S L + +AL+++YA+ G I+ A VF + KD +SWN +
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 568 ISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGY 627
ISG+AQ G AL VF +M + V+ + TF V +A + +++G++ ++++
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 628 DSETEASNS-LITLYAKCGSIDDAKREFLEMP 658
+ T+ NS ++ LY++ G ++ A + MP
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/586 (25%), Positives = 294/586 (50%), Gaps = 49/586 (8%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSA 64
G++ + F +L+ + L +++H + +K GF + + + Y+ +
Sbjct: 88 GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 147
Query: 65 MKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGS 124
K+FD+M +R V +W LISG+ ++ VL LF++M ++ PN TF L
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL------ 201
Query: 125 GNVAVQCVN----QIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
G +A + V Q+H +++ +G + +SN LI+LY K G + A+ +F+ K V
Sbjct: 202 GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 261
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
+W +MISG++ NG + EA+ +F M + + + +S + C ++ EQ H +
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ-QRDGVTYNSLISGLAQCGYSDKA 299
K+GF + + AL+ YS+ + A ++F ++ + V++ ++ISG Q ++A
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 300 LELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDL 359
++LF +M+ ++P+ T + +++A + + ++H+ +K + V ++LD
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDA 437
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
YVK VE A K F + +++V W+ ML Y Q + + ++F ++ G+ PN++T+
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 420 PTILRTCTSLGA-LSLGEQIH----------------------TQLGNLNTAQEILRRLP 456
+IL C + A + G+Q H + GN+ +A+E+ +R
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR 557
Query: 457 EDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ 516
E D+VSW +MI G+ QHG +AL++F+EM+ + ++ D + F +AC + +G
Sbjct: 558 EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG-- 615
Query: 517 IHAQSYISGFSDDLSIG------NALISLYARCGRIQEAYLVFNKI 556
+ Y D I + ++ LY+R G++++A V +
Sbjct: 616 ---EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 209 bits (532), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 267/550 (48%), Gaps = 20/550 (3%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M+ G Q NS TF L G ++H ++K G D + + N+YL G+
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
+ A +FD ++V +WN +ISG+ A L LG+F M + V +E++F V++
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNL-CFKDS 179
C ++ Q+H ++ +GF I L+ Y+K + A ++F + C +
Sbjct: 305 CANLKE--LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGL 239
VSW AMISGF QN + EA+ LF +M G P + S L+A I E+ H
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQ 418
Query: 240 IFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKA 299
+ K + + V AL+ Y + G + A ++FS + +D V ++++++G AQ G ++ A
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 300 LELFEKMQLDCLKPDCVTVASLVSACASVGA-FRTGEQLHSYAIKVGISKDIIVEGSMLD 358
+++F ++ +KP+ T +S+++ CA+ A G+Q H +AIK + + V ++L
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 359 LYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYT 418
+Y K ++E+A + F +++V WN M+ Y Q ++ +FK+M+ + + T
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 419 YPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGE 478
+ + CT G + GE+ + + P + S M+ + + G +
Sbjct: 599 FIGVFAACTHAGLVEEGEKY------FDIMVRDCKIAPTKEHNS--CMVDLYSRAGQLEK 650
Query: 479 ALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALIS 538
A+++ E M N + + + + ++AC + GR + A+ I+ +D + L +
Sbjct: 651 AMKVIENMPN---PAGSTIWRTILAACRVHKKTELGR-LAAEKIIAMKPEDSAAYVLLSN 706
Query: 539 LYARCGRIQE 548
+YA G QE
Sbjct: 707 MYAESGDWQE 716
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 151/279 (54%), Gaps = 4/279 (1%)
Query: 445 LNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISA 504
L A + + P D S+ +++ GF + G EA LF + G++ D FSS +
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 505 CAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISW 564
A + GRQ+H Q GF DD+S+G +L+ Y + ++ VF+++ ++ ++W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 565 NGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIK 624
LISG+A++ + L +F +M G Q N +TF + + A +G QVH +++K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 625 TGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINL 684
G D SNSLI LY KCG++ A+ F + K+ V+WN+MI+G++ +G LEA+ +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 685 FEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESM 723
F M+ + V + +F V+ C+++ + LR+ E +
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANL----KELRFTEQL 317
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 545 RIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVS 604
R+ A+ +F+K +D S+ L+ GF++ G + A ++F + ++G++ + F SV+
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 605 AAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVS 664
+A L + G+Q+H IK G+ + SL+ Y K + D ++ F EM E+N V+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 665 WNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMS 724
W +I+G++++ E + LF +M+ PN TF L + G+ GL+ ++
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ-VHTVV 220
Query: 725 TEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIG 784
+ GL +++L + G + +AR ++ ++ + W +++S
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG---------- 269
Query: 785 EYAANHL 791
YAAN L
Sbjct: 270 -YAANGL 275
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 598 bits (1541), Expect = e-170, Method: Compositional matrix adjust.
Identities = 340/987 (34%), Positives = 518/987 (52%), Gaps = 75/987 (7%)
Query: 16 LLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRT 75
L ++ L+ K H +IL + E+ L + ++Y G L A ++FD M R
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 76 VFSWNKLISGF------VAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAV 129
+ SWN +++ + V + + L LF + D V + T +L+ C+ SG V
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFL-LFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 130 QCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGF 189
HG G G ++ L+++Y K G + K +F + ++D V W M+ +
Sbjct: 164 S--ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 190 SQNGYEREAILLFCQMHILGTVPTPYA------ISSALSACTKIELFEIGEQFHGLIFKW 243
+ G++ EAI L H G P IS S +++ F G +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSV---- 277
Query: 244 GFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELF 303
SE N ++ Y SG ++ + F+ M + D
Sbjct: 278 ---SEIIFRNKGLSEYLHSGQYSALLKCFADMVESD------------------------ 310
Query: 304 EKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKC 363
++C D VT +++ V + G+Q+H A+K+G+ + V S++++Y K
Sbjct: 311 ----VEC---DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL 363
Query: 364 SDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTIL 423
A F +++ WN ++ Q E+ +F Q+ GL P+QYT ++L
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 424 RTCTSLG-ALSLGEQIHTQLGNLNTAQ---------------------EILRRLPEDDVV 461
+ +SL LSL +Q+H +N EIL D+V
Sbjct: 424 KAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLV 483
Query: 462 SWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQS 521
+W AM+ G+ Q + L+LF M QG +SD+ ++ C + A+NQG+Q+HA +
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 522 YISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGAL 581
SG+ DL + + ++ +Y +CG + A F+ I D+++W +ISG ++G E A
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 582 QVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLY 641
VFSQM +GV + +T ++ A++ L ++QG+Q+HA +K ++ SL+ +Y
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 642 AKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFV 701
AKCGSIDDA F + N +WNAM+ G +QHG E + LF++MK + P+ VTF+
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 702 GVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPI 761
GVLSACSH GLV+E ++ SM +YG+ P+ EHY+C+ D LGRAG + +A E M +
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 762 EPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQI 821
E A ++RTLL+ACRV + E G+ A LLELEP DS+ YVLLSN+YAAA KWD
Sbjct: 784 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 843
Query: 822 RQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGR 881
R +MK VKK+PG SWIEVKN IH F V DR + + IY + ++ R + + GYV
Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET 903
Query: 882 YSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKI 941
D+E+E+K+ +Y HSEKLA+AFGLLS S PI VIKNLRVC DCHN +K+++K+
Sbjct: 904 DFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKV 963
Query: 942 SNRTIVVRDANRFHHFEGGVCSCRDYW 968
NR IV+RDANRFH F+ G+CSC DYW
Sbjct: 964 YNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/671 (25%), Positives = 308/671 (45%), Gaps = 61/671 (9%)
Query: 6 IQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAM 65
+ + T +L+ CL G + ++ HG K+G DG++ + NIYL G +
Sbjct: 141 VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGK 200
Query: 66 KIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSG 125
+F++M R V WN ++ ++ + L + PNE T + R G
Sbjct: 201 VLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARIS-GDD 259
Query: 126 NVAVQCVNQIHGLIISHGFGGSPLI-SNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVA 184
+ A Q + +G + S +I N + Y +G + K CF D V
Sbjct: 260 SDAGQVKSFANG---NDASSVSEIIFRNKGLSEYLHSGQYSALLK-----CFADMV---- 307
Query: 185 MISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWG 244
++ E + + L+ K++ +G+Q H + K G
Sbjct: 308 ------ESDVECDQVTFILM----------------LATAVKVDSLALGQQVHCMALKLG 345
Query: 245 FSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFE 304
V N+L+ +Y + A +F M +RD +++NS+I+G+AQ G +A+ LF
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 305 KMQLDCLKPDCVTVASLVSACASVG-AFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKC 363
++ LKPD T+ S++ A +S+ +Q+H +AIK+ D V +++D Y +
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 364 SDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTIL 423
++ A F ++V WN M+ Y Q +D ++ ++F M +G + +T T+
Sbjct: 466 RCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 424 RTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVV 461
+TC L A++ G+Q+H + G+++ AQ +P D V
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 462 SWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQS 521
+WT MI G +++G A +F +M G+ D ++ A + + AL QGRQIHA +
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 522 YISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGAL 581
++D +G +L+ +YA+CG I +AY +F +I+ + +WN ++ G AQ G + L
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 704
Query: 582 QVFSQMTQVGVQANLYTFGSVVSAAANLANIKQG-KQVHAMIIKTGYDSETEASNSLITL 640
Q+F QM +G++ + TF V+SA ++ + + K + +M G E E + L
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADA 764
Query: 641 YAKCGSIDDAK 651
+ G + A+
Sbjct: 765 LGRAGLVKQAE 775
Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 223/433 (51%), Gaps = 2/433 (0%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M E ++ + TF+ +L + SL +++H LKLG D + + N+Y
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 365
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
A +FD+MS+R + SWN +I+G L + LF+Q++ + P++ T VL+A
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
S + Q+H I +S LID Y++N + A+ +F F D V
Sbjct: 426 A-SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLV 483
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
+W AM++G++Q+ + + LF MH G + +++ C + G+Q H
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
K G+ + +V + ++ +Y + G++++A+ F + D V + ++ISG + G ++A
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLY 360
+F +M+L + PD T+A+L A + + A G Q+H+ A+K+ + D V S++D+Y
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 361 VKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYP 420
KC ++ AY F E N+ WN MLV Q + E+ Q+FKQM++ G+ P++ T+
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 421 TILRTCTSLGALS 433
+L C+ G +S
Sbjct: 724 GVLSACSHSGLVS 736
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 172/348 (49%), Gaps = 9/348 (2%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLE-AKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDS 63
G++ + T +L+ S L +K++H +K+ + + + Y + +
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 64 AMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIG 123
A +F+ + V +WN +++G+ + L LF M ++ T V + C
Sbjct: 471 AEILFERHNFDLV-AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC-- 527
Query: 124 SGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWV 183
A+ Q+H I G+ +S+ ++D+Y K G + +A+ F+++ D V+W
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 184 AMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKW 243
MISG +NG E A +F QM ++G +P + I++ A + + E G Q H K
Sbjct: 588 TMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL 647
Query: 244 GFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELF 303
+++ FV +LV +Y++ G++ A +F +++ + +N+++ GLAQ G + L+LF
Sbjct: 648 NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLF 707
Query: 304 EKMQLDCLKPDCVTVASLVSACASVG----AFRTGEQLH-SYAIKVGI 346
++M+ +KPD VT ++SAC+ G A++ +H Y IK I
Sbjct: 708 KQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEI 755
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 574 bits (1480), Expect = e-162, Method: Compositional matrix adjust.
Identities = 293/785 (37%), Positives = 469/785 (59%), Gaps = 34/785 (4%)
Query: 218 SSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ- 276
SS L +C + F +G+ H + ++ ++ + N+L++LYS+SG+ AE +F M+
Sbjct: 66 SSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRR 125
Query: 277 --QRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTG 334
+RD V+++++++ G A+++F + L P+ +++ AC++ G
Sbjct: 126 FGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
Query: 335 EQLHSYAIKVG-ISKDIIVEGSMLDLYVKCSD-VETAYKFFLTTETENVVLWNVMLVAYG 392
+ +K G D+ V S++D++VK + E AYK F NVV W +M+
Sbjct: 186 RVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCM 245
Query: 393 QLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL---------- 442
Q+ E+ + F M G +++T ++ C L LSLG+Q+H+
Sbjct: 246 QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE 305
Query: 443 -------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQH-GMFGEALELFEEMEN 488
G+++ +++ R+ + V+SWTA+I G++++ + EA+ LF EM
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 489 QG-IQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQ 547
QG ++ ++ FSSA AC + G+Q+ Q++ G + + S+ N++IS++ + R++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 548 EAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAA 607
+A F + K+ +S+N + G ++ E A ++ S++T+ + + +TF S++S A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 608 NLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNA 667
N+ +I++G+Q+H+ ++K G N+LI++Y+KCGSID A R F M +N +SW +
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 668 MITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEY 727
MITGF++HG+A+ + F +M + V PN VT+V +LSACSHVGLV+EG R+F SM ++
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 728 GLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYA 787
+ PK EHYAC+VDLL RAG L+ A EF MP + D +VWRT L ACRVH N E+G+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 788 ANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHA 847
A +LEL+P + A Y+ LSNIYA AGKW+ ++R+ MK+R + KE G SWIEV + IH
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 848 FFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGR----YSLWSDLEQEQKDPCVYIHSEK 903
F+VGD HP A +IYD L L + GYV + L + ++ +K+ +Y HSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785
Query: 904 LAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCS 963
+A+AFGL+S S S P+ V KNLRVC DCHN +K++S +S R IV+RD NRFHHF+ G CS
Sbjct: 786 IAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCS 845
Query: 964 CRDYW 968
C DYW
Sbjct: 846 CNDYW 850
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 175/610 (28%), Positives = 309/610 (50%), Gaps = 39/610 (6%)
Query: 88 AKKLSGRVLGLFLQMIDDDVIP-NEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGG 146
A L G V L L M D + P + TF +L++CI + + + +H +I
Sbjct: 39 AGDLRGAVSALDL-MARDGIRPMDSVTFSSLLKSCIRARDFRLG--KLVHARLIEFDIEP 95
Query: 147 SPLISNPLIDLYAKNGFIDSAKKVFNNLCF---KDSVSWVAMISGFSQNGYEREAILLFC 203
++ N LI LY+K+G A+ VF + +D VSW AM++ + NG E +AI +F
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 204 QMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWG-FSSETFVCNALVTLYSRS 262
+ LG VP Y ++ + AC+ + +G G + K G F S+ V +L+ ++ +
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 263 GN-LTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASL 321
N +A ++F KM + + VT+ +I+ Q G+ +A+ F M L + D T++S+
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 322 VSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCS---DVETAYKFFLTTET 378
SACA + G+QLHS+AI+ G+ D VE S++D+Y KCS V+ K F E
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 379 ENVVLWNVMLVAYGQ-LNDLSESFQIFKQMQTEG-LTPNQYTYPTILRTCTSLGALSLGE 436
+V+ W ++ Y + N +E+ +F +M T+G + PN +T+ + + C +L +G+
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 437 QIHTQL----------------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHG 474
Q+ Q + AQ L E ++VS+ + G ++
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 475 MFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGN 534
F +A +L E+ + + F+S +S A + ++ +G QIH+Q G S + + N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 535 ALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQA 594
ALIS+Y++CG I A VFN ++ ++ ISW +I+GFA+ G+ L+ F+QM + GV+
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 595 NLYTFGSVVSAAANLANIKQG-KQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKRE 653
N T+ +++SA +++ + +G + ++M + E ++ L + G + DA
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 654 FLEMPEKNEV 663
MP + +V
Sbjct: 634 INTMPFQADV 643
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/604 (24%), Positives = 299/604 (49%), Gaps = 41/604 (6%)
Query: 1 MEERGIQA-NSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSG 59
M GI+ +S TF LL+ C+ K +H ++++ + + VL + ++Y SG
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 60 DLDSAMKIFDDMS---KRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVG 116
D A +F+ M KR V SW+ +++ + + +F++ ++ ++PN+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 117 VLRACIGSGNVAVQCVNQIHGLIISHG-FGGSPLISNPLIDLYAK--NGFIDSAKKVFNN 173
V+RAC S V V V G ++ G F + LID++ K N F ++A KVF+
Sbjct: 172 VIRACSNSDFVGVGRVTL--GFLMKTGHFESDVCVGCSLIDMFVKGENSF-ENAYKVFDK 228
Query: 174 LCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIG 233
+ + V+W MI+ Q G+ REAI F M + G + +SS SAC ++E +G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 234 EQFHGLIFKWGFSSETFVCNALVTLYSR---SGNLTSAEQIFSKMQQRDGVTYNSLISG- 289
+Q H + G + V +LV +Y++ G++ ++F +M+ +++ +LI+G
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 290 LAQCGYSDKALELFEKMQLDC-LKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISK 348
+ C + +A+ LF +M ++P+ T +S AC ++ R G+Q+ A K G++
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 349 DIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQ 408
+ V S++ ++VK +E A + F + +N+V +N L + + ++F++ ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 409 TEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL----------------------GNLN 446
L + +T+ ++L ++G++ GEQIH+Q+ G+++
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 447 TAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACA 506
TA + + +V+SWT+MI GF +HG LE F +M +G++ + + + + +SAC+
Sbjct: 527 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Query: 507 GIQALNQG-RQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAK-DNISW 564
+ +++G R ++ + ++ L R G + +A+ N + + D + W
Sbjct: 587 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646
Query: 565 NGLI 568
+
Sbjct: 647 RTFL 650
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 278/571 (48%), Gaps = 23/571 (4%)
Query: 3 ERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLG-FDGEQVLCDKFFNIYLT-SGD 60
E G+ N + ++ C + + + G ++K G F+ + + ++++
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENS 218
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
++A K+FD MS+ V +W +I+ + + FL M+ ++ T V A
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAK---NGFIDSAKKVFNNLCFK 177
C N+++ Q+H I G + L+D+YAK +G +D +KVF+ +
Sbjct: 279 CAELENLSLG--KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 178 DSVSWVAMISGFSQN-GYEREAILLFCQMHILGTV-PTPYAISSALSACTKIELFEIGEQ 235
+SW A+I+G+ +N EAI LF +M G V P + SSA AC + +G+Q
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 236 FHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGY 295
G FK G +S + V N++++++ +S + A++ F + +++ V+YN+ + G +
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 296 SDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGS 355
++A +L ++ L T ASL+S A+VG+ R GEQ+HS +K+G+S + V +
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 356 MLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPN 415
++ +Y KC ++TA + F E NV+ W M+ + + + F QM EG+ PN
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 416 QYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGM 475
+ TY IL C+ +G +S G + + N+ E + P+ + + M+ + G+
Sbjct: 575 EVTYVAILSACSHVGLVSEGWR------HFNSMYEDHKIKPK--MEHYACMVDLLCRAGL 626
Query: 476 FGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNA 535
+A E M Q+D + + + + AC + + + ++ A+ + ++ +
Sbjct: 627 LTDAFEFINTMP---FQADVLVWRTFLGACR-VHSNTELGKLAARKILELDPNEPAAYIQ 682
Query: 536 LISLYARCGRIQEAYLVFNKIDAKDNISWNG 566
L ++YA G+ +E+ + K+ ++ + G
Sbjct: 683 LSNIYACAGKWEESTEMRRKMKERNLVKEGG 713
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 573 bits (1478), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/874 (36%), Positives = 494/874 (56%), Gaps = 27/874 (3%)
Query: 119 RACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKD 178
RA S N+ + +IH L+IS G S S LID Y+ S+ VF +
Sbjct: 12 RALSSSSNL--NELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 179 SVS-WVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFH 237
+V W ++I FS+NG EA+ + ++ P Y S + AC + E+G+ +
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 238 GLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSD 297
I GF S+ FV NALV +YSR G LT A Q+F +M RD V++NSLISG + GY +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 298 KALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSML 357
+ALE++ +++ + PD TV+S++ A ++ + G+ LH +A+K G++ ++V ++
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 358 DLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQY 417
+Y+K A + F + + V +N M+ Y +L + ES ++F + + P+
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLL 308
Query: 418 TYPTILRTCTSLGALSLGEQIHTQL----------------------GNLNTAQEILRRL 455
T ++LR C L LSL + I+ + G++ TA+++ +
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 456 PEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGR 515
D VSW ++I G++Q G EA++LF+ M Q+D+I + IS + L G+
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 516 QIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSG 575
+H+ SG DLS+ NALI +YA+CG + ++ +F+ + D ++WN +IS + G
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 576 YCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASN 635
LQV +QM + V ++ TF + A+LA + GK++H +++ GY+SE + N
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 636 SLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMP 695
+LI +Y+KCG ++++ R F M ++ V+W MI + +G +A+ F M+K ++P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 696 NHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREF 755
+ V F+ ++ ACSH GLV+EGL FE M T Y + P EHYACVVDLL R+ +S+A EF
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 756 TEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKW 815
+ MPI+PDA +W ++L ACR +ME E + ++EL P+D +L SN YAA KW
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 816 DCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEI 875
D IR+ +KD+ + K PG SWIEV ++H F GD P ++ IY L L +A+
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Query: 876 GYVQGRYSLWSDL-EQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNW 934
GY+ + +L E+E+K + HSE+LAIAFGLL+ P+ V+KNLRVC DCH
Sbjct: 789 GYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEV 848
Query: 935 IKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
K +SKI R I+VRDANRFH F+ G CSC+D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 181/681 (26%), Positives = 333/681 (48%), Gaps = 30/681 (4%)
Query: 22 SYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSK-RTVFSWN 80
S +L E ++IH ++ LG D K + Y + S++ +F +S + V+ WN
Sbjct: 16 SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75
Query: 81 KLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLII 140
+I F L L + ++ + V P++ TF V++AC G + + + ++ I+
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG--DLVYEQIL 133
Query: 141 SHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAIL 200
GF + N L+D+Y++ G + A++VF+ + +D VSW ++ISG+S +GY EA+
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 201 LFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYS 260
++ ++ VP + +SS L A + + + G+ HG K G +S V N LV +Y
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYL 253
Query: 261 RSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVAS 320
+ T A ++F +M RD V+YN++I G + ++++ +F + LD KPD +TV+S
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSS 312
Query: 321 LVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETEN 380
++ AC + + +++Y +K G + V ++D+Y KC D+ TA F + E ++
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 381 VVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHT 440
V WN ++ Y Q DL E+ ++FK M + TY ++ T L L G+ +H+
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 441 ----------------------QLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGE 478
+ G + + +I + D V+W +I V+ G F
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 479 ALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALIS 538
L++ +M + D F + CA + A G++IH G+ +L IGNALI
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 539 LYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYT 598
+Y++CG ++ + VF ++ +D ++W G+I + G E AL+ F+ M + G+ +
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 599 FGSVVSAAANLANIKQGKQVHAMIIKTGY--DSETEASNSLITLYAKCGSIDDAKREFLE 656
F +++ A ++ + +G +KT Y D E ++ L ++ I A+
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEK-MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671
Query: 657 MPEKNEVS-WNAMITGFSQHG 676
MP K + S W +++ G
Sbjct: 672 MPIKPDASIWASVLRACRTSG 692
Score = 243 bits (619), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 168/619 (27%), Positives = 305/619 (49%), Gaps = 37/619 (5%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
+ E + + TF +++ C ++ +IL +GF+ + + + ++Y G
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGL 156
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
L A ++FD+M R + SWN LISG+ + L ++ ++ + ++P+ T VL A
Sbjct: 157 LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 121 CIGSGNVAVQCVNQ-IHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS 179
GN+ V Q +HG + G +++N L+ +Y K A++VF+ + +DS
Sbjct: 217 F---GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGL 239
VS+ MI G+ + E++ +F + ++ P +SS L AC + + + +
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 240 IFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKA 299
+ K GF E+ V N L+ +Y++ G++ +A +F+ M+ +D V++NS+ISG Q G +A
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 300 LELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDL 359
++LF+ M + + D +T L+S + + G+ LHS IK GI D+ V +++D+
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
Y KC +V + K F + T + V WN ++ A + D + Q+ QM+ + P+ T+
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 420 PTILRTCTSLGALSLGEQIHT-----------QLGN-----------LNTAQEILRRLPE 457
L C SL A LG++IH Q+GN L + + R+
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR 572
Query: 458 DDVVSWTAMIVGFVQHGMFGE---ALELFEEMENQGIQSDNIGFSSAISACAGIQALNQG 514
DVV+WT MI + GM+GE ALE F +ME GI D++ F + I AC+ +++G
Sbjct: 573 RDVVTWTGMIYAY---GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 515 RQIHAQSYISGFSDDLSIGN--ALISLYARCGRIQEAYLVFNKIDAKDNIS-WNGLISGF 571
+ + + D I + ++ L +R +I +A + K + S W ++
Sbjct: 630 LACF-EKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC 688
Query: 572 AQSGYCEGALQVFSQMTQV 590
SG E A +V ++ ++
Sbjct: 689 RTSGDMETAERVSRRIIEL 707
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 546 bits (1406), Expect = e-154, Method: Compositional matrix adjust.
Identities = 283/723 (39%), Positives = 413/723 (57%), Gaps = 56/723 (7%)
Query: 250 FVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLD 309
F N L+ YS++G ++ E F K+ RDGVT+N LI G + G A++ + M D
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 310 -CLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVET 368
VT+ +++ +S G G+Q+H IK+G ++V +L +Y +
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 369 AYKFFLTTETENVVLWNVM---LVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRT 425
A K F + N V++N + L+A G + D + Q+F+ M
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIED---ALQLFRGM------------------ 231
Query: 426 CTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEE 485
E D VSW AMI G Q+G+ EA+E F E
Sbjct: 232 -------------------------------EKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 486 MENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGR 545
M+ QG++ D F S + AC G+ A+N+G+QIHA + F D + +G+ALI +Y +C
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 546 IQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSA 605
+ A VF+++ K+ +SW ++ G+ Q+G E A+++F M + G+ + YT G +SA
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 606 AANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSW 665
AN++++++G Q H I +G SNSL+TLY KCG IDD+ R F EM ++ VSW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 666 NAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMST 725
AM++ ++Q G A+E I LF+KM +H + P+ VT GV+SACS GLV +G RYF+ M++
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 726 EYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGE 785
EYG+VP HY+C++DL R+G L A F MP PDA+ W TLLSACR N+EIG+
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 786 YAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSI 845
+AA L+EL+P A Y LLS+IYA+ GKWD Q+R+ M+++ VKKEPGQSWI+ K +
Sbjct: 561 WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKL 620
Query: 846 HAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLA 905
H+F D P D+IY L LN ++ + GY + D+E+ K + HSE+LA
Sbjct: 621 HSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLA 680
Query: 906 IAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCR 965
IAFGL+ + PI V KNLRVC DCHN K +S ++ R I+VRDA RFH F+ G CSC
Sbjct: 681 IAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCG 740
Query: 966 DYW 968
D+W
Sbjct: 741 DFW 743
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 231/492 (46%), Gaps = 44/492 (8%)
Query: 55 YLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDD-DVIPNEAT 113
Y +G + F+ + R +WN LI G+ L G + + M+ D T
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 114 FVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVF-- 171
+ +L+ +G+V++ QIHG +I GF L+ +PL+ +YA G I AKKVF
Sbjct: 142 LMTMLKLSSSNGHVSLG--KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 172 ----NNLCF------------------------KDSVSWVAMISGFSQNGYEREAILLFC 203
N + + KDSVSW AMI G +QNG +EAI F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 204 QMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSG 263
+M + G Y S L AC + G+Q H I + F +V +AL+ +Y +
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 264 NLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVS 323
L A+ +F +M+Q++ V++ +++ G Q G +++A+++F MQ + PD T+ +S
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 324 ACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVL 383
ACA+V + G Q H AI G+ + V S++ LY KC D++ + + F + V
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439
Query: 384 WNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLG 443
W M+ AY Q E+ Q+F +M GL P+ T ++ C+ G + G++
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF---- 495
Query: 444 NLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAIS 503
L T++ + +P + ++ MI F + G EA+ M D IG+++ +S
Sbjct: 496 KLMTSEYGI--VPS--IGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLS 548
Query: 504 ACAGIQALNQGR 515
AC L G+
Sbjct: 549 ACRNKGNLEIGK 560
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 248/529 (46%), Gaps = 86/529 (16%)
Query: 234 EQFHGLIFKWGFSSETFVCNALV-------------------------------TLYSRS 262
+ HG I + ETF+ N +V YS++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 263 GNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLD-CLKPDCVTVASL 321
G ++ E F K+ RDGVT+N LI G + G A++ + M D VT+ ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 322 VSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENV 381
+ +S G G+Q+H IK+G ++V +L +Y + A K F + N
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 382 VLWNVM---LVAYGQLND---------------------------LSESFQIFKQMQTEG 411
V++N + L+A G + D E+ + F++M+ +G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 412 LTPNQYTYPTILRTCTSLGALSLGEQIHT----------------------QLGNLNTAQ 449
L +QY + ++L C LGA++ G+QIH + L+ A+
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 450 EILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQ 509
+ R+ + +VVSWTAM+VG+ Q G EA+++F +M+ GI D+ AISACA +
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 510 ALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLIS 569
+L +G Q H ++ SG +++ N+L++LY +CG I ++ +FN+++ +D +SW ++S
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 570 GFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMII-KTGYD 628
+AQ G +Q+F +M Q G++ + T V+SA + +++G++ ++ + G
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 629 SETEASNSLITLYAKCGSIDDAKREFLEMP-EKNEVSWNAMITGFSQHG 676
+ +I L+++ G +++A R MP + + W +++ G
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 218/483 (45%), Gaps = 57/483 (11%)
Query: 152 NPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLF-CQMHILGT 210
N L+ Y+K G I + F L +D V+W +I G+S +G A+ + M
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 211 VPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQ 270
T + + L + +G+Q HG + K GF S V + L+ +Y+ G ++ A++
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 271 IFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDC-------------------- 310
+F + R+ V YNSL+ GL CG + AL+LF M+ D
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 311 ----------LKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLY 360
LK D S++ AC +GA G+Q+H+ I+ I V +++D+Y
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 361 VKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYP 420
KC + A F + +NVV W M+V YGQ E+ +IF MQ G+ P+ YT
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 421 TILRTCTSLGALSLGEQIHTQL----------------------GNLNTAQEILRRLPED 458
+ C ++ +L G Q H + G+++ + + +
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 459 DVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIH 518
D VSWTAM+ + Q G E ++LF++M G++ D + + ISAC+ + +G Q +
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRY 494
Query: 519 AQSYISGFSDDLSIGN--ALISLYARCGRIQEAYLVFNKID-AKDNISWNGLISGFAQSG 575
+ S + SIG+ +I L++R GR++EA N + D I W L+S G
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 576 YCE 578
E
Sbjct: 555 NLE 557
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 193/411 (46%), Gaps = 34/411 (8%)
Query: 12 TFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDM 71
T + +L+ S G + K+IHG+++KLGF+ ++ +Y G + A K+F +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 72 SKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDV-------------IPNEA------ 112
R +N L+ G +A + L LF M D V + EA
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 113 -----------TFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKN 161
F VL AC G G A+ QIH II F + + LID+Y K
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLG--AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 162 GFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSAL 221
+ AK VF+ + K+ VSW AM+ G+ Q G EA+ +F M G P Y + A+
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 222 SACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGV 281
SAC + E G QFHG G V N+LVTLY + G++ + ++F++M RD V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 282 TYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYA 341
++ +++S AQ G + + ++LF+KM LKPD VT+ ++SAC+ G G++
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 342 I-KVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTE-TENVVLWNVMLVA 390
+ GI I M+DL+ + +E A +F + + W +L A
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 11/342 (3%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M+ +G++ + F +L C G++ E K+IH I++ F + ++Y
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
L A +FD M ++ V SW ++ G+ + + +FL M + P+ T + A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 121 CIGSGNV-AVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS 179
C NV +++ +Q HG I+ G +SN L+ LY K G ID + ++FN + +D+
Sbjct: 381 C---ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGL 239
VSW AM+S ++Q G E I LF +M G P ++ +SAC++ L E G+++ L
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 240 IF-KWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ-QRDGVTYNSLISGLAQCGYSD 297
+ ++G + ++ L+SRSG L A + + M D + + +L+S G +
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Query: 298 KALELFEKM-QLDCLKPDCVTVASLVSACA----SVGAFRTG 334
E + +LD P T+ S + A SV R G
Sbjct: 558 IGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRG 599
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 121/285 (42%), Gaps = 67/285 (23%)
Query: 498 FSSAISACAGIQALNQGRQ--------IHAQSYISGF----------------------- 526
+S I C G+ A NQ R I A Y F
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 527 ---SDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQV 583
+L N L+ Y++ G I E F K+ +D ++WN LI G++ SG A++
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 584 FSQMTQVGVQANL--YTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLY 641
++ M + ANL T +++ +++ ++ GKQ+H +IK G++S + L+ +Y
Sbjct: 126 YNTMMR-DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMY 184
Query: 642 AKCGSIDDAKREFLEMP------------------------------EKNEVSWNAMITG 671
A G I DAK+ F + EK+ VSW AMI G
Sbjct: 185 ANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKG 244
Query: 672 FSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEG 716
+Q+G A EAI F +MK + + F VL AC +G +NEG
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 616 KQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQH 675
K +H II+ ET N+++ YA S A+R F +P+ N SWN ++ +S+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 676 GYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEY 727
G E + FEK+ D VT+ ++ S GLV ++ + +M ++
Sbjct: 86 GLISEMESTFEKLPDRD----GVTWNVLIEGYSLSGLVGAAVKAYNTMMRDF 133
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 543 bits (1400), Expect = e-153, Method: Compositional matrix adjust.
Identities = 285/827 (34%), Positives = 475/827 (57%), Gaps = 41/827 (4%)
Query: 182 WVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIF 241
W+ ++ ++ REA+L + M +LG P YA + L A ++ E+G+Q H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 242 KWGFSSETF-VCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
K+G+ ++ V N LV LY + G+ + ++F ++ +R+ V++NSLIS L + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVG---AFRTGEQLHSYAIKVGISKDIIVEGSML 357
E F M + ++P T+ S+V+AC+++ G+Q+H+Y ++ G I+ +++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLV 243
Query: 358 DLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQY 417
+Y K + ++ + ++V WN +L + Q L E+ + ++M EG+ P+++
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 418 TYPTILRTCTSLGALSLGEQIHT---QLGNLN--------------------TAQEILRR 454
T ++L C+ L L G+++H + G+L+ + + +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 455 LPEDDVVSWTAMIVGFVQHGMFGEALELFEEME-NQGIQSDNIGFSSAISACAGIQALNQ 513
+ + + W AMI G+ Q+ EAL LF ME + G+ +++ + + AC A ++
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 514 GRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQ 573
IH G D + N L+ +Y+R G+I A +F K++ +D ++WN +I+G+
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 574 SGYCEGALQVFSQM-----------TQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMI 622
S + E AL + +M ++V ++ N T +++ + A L+ + +GK++HA
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 623 IKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAI 682
IK ++ ++L+ +YAKCG + +++ F ++P+KN ++WN +I + HG EAI
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 683 NLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDL 742
+L M V PN VTF+ V +ACSH G+V+EGLR F M +YG+ P +HYACVVDL
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 743 LGRAGCLSRAREFTEQMPIEPD-AMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSAT 801
LGRAG + A + MP + + A W +LL A R+H N+EIGE AA +L++LEP ++
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 723
Query: 802 YVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKI 861
YVLL+NIY++AG WD ++R+ MK++GV+KEPG SWIE + +H F GD HP ++K+
Sbjct: 724 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Query: 862 YDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILV 921
YL L R+ + GYV + ++E+++K+ + HSEKLAIAFG+L+ S I V
Sbjct: 784 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 843
Query: 922 IKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
KNLRVCNDCH KF+SKI +R I++RD RFH F+ G CSC DYW
Sbjct: 844 AKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 249 bits (637), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 165/604 (27%), Positives = 290/604 (48%), Gaps = 41/604 (6%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQV-LCDKFFNIYLTSGDLDS 63
GI+ ++ F LL+ + K+IH + K G+ + V + + N+Y GD +
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 64 AMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIG 123
K+FD +S+R SWN LIS + + L F M+D++V P+ T V V+ AC
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 124 -SGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSW 182
+ Q+H + G S I N L+ +Y K G + S+K + + +D V+W
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270
Query: 183 VAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFK 242
++S QN EA+ +M + G P + ISS L AC+ +E+ G++ H K
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 243 WG-FSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALE 301
G +FV +ALV +Y + S ++F M R +N++I+G +Q + +AL
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 302 LFEKMQLDC-LKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLY 360
LF M+ L + T+A +V AC GAF E +H + +K G+ +D V+ +++D+Y
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 361 VKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQ------TEG--- 411
+ ++ A + F E ++V WN M+ Y ++ + +MQ ++G
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 412 --LTPNQYTYPTILRTCTSLGALSLGEQIH----------------------TQLGNLNT 447
L PN T TIL +C +L AL+ G++IH + G L
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 448 AQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAG 507
++++ ++P+ +V++W +I+ + HG EA++L M QG++ + + F S +AC+
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 508 IQALNQGRQI-HAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKI--DAKDNISW 564
+++G +I + G ++ L R GRI+EAY + N + D +W
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 690
Query: 565 NGLI 568
+ L+
Sbjct: 691 SSLL 694
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 2 EERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDL 61
E G+ ANS T ++ C+ G+ + IHG ++K G D ++ + + ++Y G +
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 62 DSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDD-----------VIPN 110
D AM+IF M R + +WN +I+G+V + L L +M + + + PN
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 111 EATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKV 170
T + +L +C +A +IH I + + + L+D+YAK G + ++KV
Sbjct: 517 SITLMTILPSCAALSALAKG--KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 171 FNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELF 230
F+ + K+ ++W +I + +G +EAI L M + G P S +AC+ +
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 231 EIGEQ-FHGLIFKWGF--SSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRD 279
+ G + F+ + +G SS+ + C +V L R+G + A Q+ + M RD
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAGRIKEAYQLMN-MMPRD 683
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 299/866 (34%), Positives = 481/866 (55%), Gaps = 31/866 (3%)
Query: 134 QIHGLII-SHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQN 192
+IH L+ S ++ +I +YA G D ++ VF+ L K+ W A+IS +S+N
Sbjct: 105 KIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRN 164
Query: 193 GYEREAILLFCQM-HILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFV 251
E + F +M +P + + AC + IG HGL+ K G + FV
Sbjct: 165 ELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFV 224
Query: 252 CNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLD-- 309
NALV+ Y G +T A Q+F M +R+ V++NS+I + G+S+++ L +M +
Sbjct: 225 GNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENG 284
Query: 310 --CLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVE 367
PD T+ +++ CA G+ +H +A+K+ + K++++ +++D+Y KC +
Sbjct: 285 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 344
Query: 368 TAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQT--EGLTPNQYT------- 418
A F +NVV WN M+ + D +F + +QM E + ++ T
Sbjct: 345 NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 404
Query: 419 --YPTILRTCTSLGALSLGEQI-------------HTQLGNLNTAQEILRRLPEDDVVSW 463
+ + L + L SL ++ + + G+L+ AQ + + V SW
Sbjct: 405 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 464
Query: 464 TAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYI 523
A+I G Q +L+ +M+ G+ D+ S +SAC+ +++L G+++H
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 524 SGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQV 583
+ DL + +++SLY CG + +F+ ++ K +SWN +I+G+ Q+G+ + AL V
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 584
Query: 584 FSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAK 643
F QM G+Q + V A + L +++ G++ HA +K + + + SLI +YAK
Sbjct: 585 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 644 CGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGV 703
GSI + + F + EK+ SWNAMI G+ HG A EAI LFE+M++ P+ +TF+GV
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704
Query: 704 LSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRA-REFTEQMPIE 762
L+AC+H GL++EGLRY + M + +GL P +HYACV+D+LGRAG L +A R E+M E
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764
Query: 763 PDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIR 822
D +W++LLS+CR+H+N+E+GE A L ELEPE YVLLSN+YA GKW+ ++R
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 823 QIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRY 882
Q M + ++K+ G SWIE+ + +F VG+R ++I L +++++GY
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884
Query: 883 SLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKIS 942
S+ DL +E+K + HSEKLA+ +GL+ S+ I V KNLR+C DCHN K +SK+
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 943 NRTIVVRDANRFHHFEGGVCSCRDYW 968
R IVVRD RFHHF+ GVCSC DYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 286 bits (732), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 178/664 (26%), Positives = 318/664 (47%), Gaps = 34/664 (5%)
Query: 44 EQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMI 103
+ VLC + +Y G D + +FD + + +F WN +IS + +L VL F++MI
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 104 D-DDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNG 162
D++P+ T+ V++AC G +V + +HGL++ G + N L+ Y +G
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLA--VHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 163 FIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHIL----GTVPTPYAIS 218
F+ A ++F+ + ++ VSW +MI FS NG+ E+ LL +M +P +
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 219 SALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQR 278
+ L C + +G+ HG K E + NAL+ +YS+ G +T+A+ IF +
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 279 DGVTYNSLISGLAQCGYSDKALELFEKMQL--DCLKPDCVTVASLVSACASVGAFRTGEQ 336
+ V++N+++ G + G + ++ +M + +K D VT+ + V C + ++
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 337 LHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLND 396
LH Y++K + +V + + Y KC + A + F ++ V WN ++ + Q ND
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 397 LSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH----------------- 439
S QM+ GL P+ +T ++L C+ L +L LG+++H
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 536
Query: 440 -----TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSD 494
G L T Q + + + +VSW +I G++Q+G AL +F +M GIQ
Sbjct: 537 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 596
Query: 495 NIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFN 554
I AC+ + +L GR+ HA + DD I +LI +YA+ G I ++ VFN
Sbjct: 597 GISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN 656
Query: 555 KIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQ 614
+ K SWN +I G+ G + A+++F +M + G + TF V++A + I +
Sbjct: 657 GLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHE 716
Query: 615 G-KQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFL-EMPEKNEVS-WNAMITG 671
G + + M G + +I + + G +D A R EM E+ +V W ++++
Sbjct: 717 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 776
Query: 672 FSQH 675
H
Sbjct: 777 CRIH 780
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 170/716 (23%), Positives = 330/716 (46%), Gaps = 48/716 (6%)
Query: 12 TFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDM 71
T+ +++ C + +HG ++K G + + + + Y T G + A+++FD M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 72 SKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDD----VIPNEATFVGVLRACIGSGNV 127
+R + SWN +I F S L +M++++ +P+ AT V VL C +
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 128 AVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMIS 187
+ +HG + +++N L+D+Y+K G I +A+ +F K+ VSW M+
Sbjct: 309 GLG--KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 366
Query: 188 GFSQNGYEREAILLFCQMHILG--TVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGF 245
GFS G + QM G I +A+ C ++ H K F
Sbjct: 367 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Query: 246 SSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEK 305
V NA V Y++ G+L+ A+++F ++ + ++N+LI G AQ +L+ +
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 306 MQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSD 365
M++ L PD TV SL+SAC+ + + R G+++H + I+ + +D+ V S+L LY+ C +
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 366 VETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRT 425
+ T F E +++V WN ++ Y Q + +F+QM G+ + +
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 426 CTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSW 463
C+ L +L LG + H + G++ + ++ L E SW
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 666
Query: 464 TAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQG-RQIHAQSY 522
AMI+G+ HG+ EA++LFEEM+ G D++ F ++AC +++G R +
Sbjct: 667 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 726
Query: 523 ISGFSDDLSIGNALISLYARCGRIQEAY-LVFNKIDAKDNIS-WNGLISGFAQSGYCEGA 580
G +L +I + R G++ +A +V ++ + ++ W L+S E
Sbjct: 727 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 786
Query: 581 LQVFSQMTQVGVQA--NLYTFGSVVSAAANLANIKQGKQ-VHAMIIKTGYDSETEASNSL 637
+V +++ ++ + N ++ + ++++ +Q ++ M ++ +A S
Sbjct: 787 EKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLR------KDAGCSW 840
Query: 638 ITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDV 693
I L K S +R FL+ E+ + W+ + S+ GY + +++ +HD+
Sbjct: 841 IELNRKVFSFVVGER-FLDGFEEIKSLWSILEMKISKMGYRPDTMSV-----QHDL 890
Score = 209 bits (533), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 261/529 (49%), Gaps = 21/529 (3%)
Query: 1 MEERG---IQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLT 57
MEE G + T V +L C + K +HG +KL D E VL + ++Y
Sbjct: 280 MEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSK 339
Query: 58 SGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMI--DDDVIPNEATFV 115
G + +A IF + + V SWN ++ GF A+ + + QM+ +DV +E T +
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 116 GVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLC 175
+ C + + ++H + F + L++N + YAK G + A++VF+ +
Sbjct: 400 NAVPVCFHES--FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 457
Query: 176 FKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQ 235
K SW A+I G +Q+ R ++ QM I G +P + + S LSAC+K++ +G++
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Query: 236 FHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGY 295
HG I + + FV ++++LY G L + + +F M+ + V++N++I+G Q G+
Sbjct: 518 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 577
Query: 296 SDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGS 355
D+AL +F +M L ++ +++ + AC+ + + R G + H+YA+K + D + S
Sbjct: 578 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS 637
Query: 356 MLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPN 415
++D+Y K + + K F + ++ WN M++ YG E+ ++F++MQ G P+
Sbjct: 638 LIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPD 697
Query: 416 QYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGM 475
T+ +L C G IH L L+ + P ++ + +I + G
Sbjct: 698 DLTFLGVLTACNHSGL------IHEGLRYLDQMKSSFGLKP--NLKHYACVIDMLGRAGQ 749
Query: 476 FGEALELF-EEMENQGIQSDNIG-FSSAISACAGIQALNQGRQIHAQSY 522
+AL + EEM + ++G + S +S+C Q L G ++ A+ +
Sbjct: 750 LDKALRVVAEEMSEEA----DVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 542 bits (1396), Expect = e-153, Method: Compositional matrix adjust.
Identities = 280/757 (36%), Positives = 432/757 (57%), Gaps = 23/757 (3%)
Query: 234 EQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQC 293
Q L+FK G E F LV+L+ R G++ A ++F + + V Y++++ G A+
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 294 GYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVE 353
DKAL+ F +M+ D ++P L+ C R G+++H +K G S D+
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 354 GSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLT 413
+ ++Y KC V A K F ++V WN ++ Y Q + ++ K M E L
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 414 PNQYTYPTILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEI 451
P+ T ++L ++L +S+G++IH + G+L TA+++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 452 LRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQAL 511
+ E +VVSW +MI +VQ+ EA+ +F++M ++G++ ++ A+ ACA + L
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 512 NQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGF 571
+GR IH S G ++S+ N+LIS+Y +C + A +F K+ ++ +SWN +I GF
Sbjct: 354 ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGF 413
Query: 572 AQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSET 631
AQ+G AL FSQM V+ + +T+ SV++A A L+ K +H +++++ D
Sbjct: 414 AQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV 473
Query: 632 EASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKH 691
+ +L+ +YAKCG+I A+ F M E++ +WNAMI G+ HG+ A+ LFE+M+K
Sbjct: 474 FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG 533
Query: 692 DVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSR 751
+ PN VTF+ V+SACSH GLV GL+ F M Y + +HY +VDLLGRAG L+
Sbjct: 534 TIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNE 593
Query: 752 AREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAA 811
A +F QMP++P V+ +L AC++HKN+ E AA L EL P+D +VLL+NIY A
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRA 653
Query: 812 AGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRR 871
A W+ Q+R M +G++K PG S +E+KN +H+FF G HP + KIY +L L
Sbjct: 654 ASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICH 713
Query: 872 VAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDC 931
+ E GYV +L +E + K+ + HSEKLAI+FGLL+ + I V KNLRVC DC
Sbjct: 714 IKEAGYVPDT-NLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADC 772
Query: 932 HNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
HN K++S ++ R IVVRD RFHHF+ G CSC DYW
Sbjct: 773 HNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/582 (28%), Positives = 287/582 (49%), Gaps = 30/582 (5%)
Query: 16 LLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRT 75
LLE C SL E ++I + K G E K +++ G +D A ++F+ + +
Sbjct: 43 LLERC---SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 76 VFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQI 135
++ ++ GF + L F++M DDV P F +L+ C + V +I
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG--KEI 157
Query: 136 HGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYE 195
HGL++ GF L ++YAK ++ A+KVF+ + +D VSW +++G+SQNG
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 196 REAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNAL 255
R A+ + M P+ I S L A + + L +G++ HG + GF S + AL
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 256 VTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDC 315
V +Y++ G+L +A Q+F M +R+ V++NS+I Q +A+ +F+KM + +KP
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 316 VTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLT 375
V+V + ACA +G G +H ++++G+ +++ V S++ +Y KC +V+TA F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 376 TETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLG 435
++ +V WN M++ + Q ++ F QM++ + P+ +TY +++ L
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 436 EQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQH 473
+ IH + G + A+ I + E V +W AMI G+ H
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH 517
Query: 474 GMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIG 533
G ALELFEEM+ I+ + + F S ISAC+ + G + +S +LS+
Sbjct: 518 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK-ENYSIELSMD 576
Query: 534 N--ALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQ 573
+ A++ L R GR+ EA+ ++ K ++ G + G Q
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 219/423 (51%), Gaps = 2/423 (0%)
Query: 13 FVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMS 72
F +LL+ C L K+IHG ++K GF + N+Y ++ A K+FD M
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 73 KRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCV 132
+R + SWN +++G+ ++ L + M ++++ P+ T V VL A ++V
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG-- 255
Query: 133 NQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQN 192
+IHG + GF IS L+D+YAK G +++A+++F+ + ++ VSW +MI + QN
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 193 GYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVC 252
+EA+L+F +M G PT ++ AL AC + E G H L + G V
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 253 NALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLK 312
N+L+++Y + + +A +F K+Q R V++N++I G AQ G AL F +M+ +K
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 313 PDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKF 372
PD T S+++A A + + +H ++ + K++ V +++D+Y KC + A
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 373 FLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGAL 432
F +V WN M+ YG + ++F++MQ + PN T+ +++ C+ G +
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 433 SLG 435
G
Sbjct: 556 EAG 558
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 199/393 (50%), Gaps = 6/393 (1%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M E ++ + T V +L + + K+IHG ++ GFD + ++Y G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
L++A ++FD M +R V SWN +I +V + + +F +M+D+ V P + + +G L A
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
C G+ ++ IH L + G + + N LI +Y K +D+A +F L + V
Sbjct: 347 CADLGD--LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
SW AMI GF+QNG +A+ F QM P + S ++A ++ + + HG++
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
+ FV ALV +Y++ G + A IF M +R T+N++I G G+ AL
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVE--GSMLD 358
ELFE+MQ +KP+ VT S++SAC+ G G + Y +K S ++ ++ G+M+D
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVD 583
Query: 359 LYVKCSDVETAYKFFLTTETENVV-LWNVMLVA 390
L + + A+ F + + V ++ ML A
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 145/265 (54%), Gaps = 2/265 (0%)
Query: 510 ALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLIS 569
+L + RQI + +G + L+SL+ R G + EA VF ID+K N+ ++ ++
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 570 GFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDS 629
GFA+ + ALQ F +M V+ +Y F ++ + A ++ GK++H +++K+G+
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 630 ETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMK 689
+ A L +YAKC +++A++ F MPE++ VSWN ++ G+SQ+G A A+ + + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 690 KHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCL 749
+ ++ P+ +T V VL A S + L++ G + + G +VD+ + G L
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVG-KEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 750 SRAREFTEQMPIEPDAMVWRTLLSA 774
AR+ + M +E + + W +++ A
Sbjct: 288 ETARQLFDGM-LERNVVSWNSMIDA 311
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 592 VQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAK 651
+ AN+Y + + +++K+ +Q+ ++ K G E L++L+ + GS+D+A
Sbjct: 31 IPANVYEHPAAL-LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAA 89
Query: 652 REFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVG 711
R F + K V ++ M+ GF++ +A+ F +M+ DV P F +L C
Sbjct: 90 RVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEA 149
Query: 712 LVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTL 771
+ G + + + G + ++ + ++ AR+ ++MP E D + W T+
Sbjct: 150 ELRVG-KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTI 207
Query: 772 LS 773
++
Sbjct: 208 VA 209
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 538 bits (1385), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/747 (35%), Positives = 428/747 (57%), Gaps = 27/747 (3%)
Query: 249 TFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKM-- 306
T N +++ + ++G+++SA +F M R VT+ L+ A+ + D+A +LF +M
Sbjct: 79 TVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
Query: 307 QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKD--IIVEGSMLDLYVKCS 364
C PD VT +L+ C Q+H++A+K+G + + V +L Y +
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR 198
Query: 365 DVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILR 424
++ A F ++ V +N ++ Y + +ES +F +M+ G P+ +T+ +L+
Sbjct: 199 RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 425 TCTSLGALSLGEQIHT-----------QLGN-----------LNTAQEILRRLPEDDVVS 462
L +LG+Q+H +GN + + + +PE D VS
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 463 WTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSY 522
+ +I + Q + +L F EM+ G N F++ +S A + +L GRQ+H Q+
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 523 ISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQ 582
++ L +GN+L+ +YA+C +EA L+F + + +SW LISG+ Q G L+
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 583 VFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYA 642
+F++M ++A+ TF +V+ A+A+ A++ GKQ+HA II++G + + L+ +YA
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 643 KCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVG 702
KCGSI DA + F EMP++N VSWNA+I+ + +G AI F KM + + P+ V+ +G
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Query: 703 VLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIE 762
VL+ACSH G V +G YF++MS YG+ PK +HYAC++DLLGR G + A + ++MP E
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 763 PDAMVWRTLLSACRVHKNMEIGEYAANHLLELEP-EDSATYVLLSNIYAAAGKWDCRDQI 821
PD ++W ++L+ACR+HKN + E AA L +E D+A YV +SNIYAAAG+W+ +
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 822 RQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGR 881
++ M++RG+KK P SW+EV + IH F D+ HP D+I + L + GY
Sbjct: 679 KKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDT 738
Query: 882 YSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKI 941
S+ D++++ K + HSE+LA+AF L+S + PI+V+KNLR C DCH IK +SKI
Sbjct: 739 SSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKI 798
Query: 942 SNRTIVVRDANRFHHFEGGVCSCRDYW 968
R I VRD +RFHHF GVCSC DYW
Sbjct: 799 VKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/626 (26%), Positives = 291/626 (46%), Gaps = 74/626 (11%)
Query: 109 PNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAK 168
P+ ATF+ R + II GF SN +++ + G + +A+
Sbjct: 24 PSPATFLDTRR---------------VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAAR 68
Query: 169 KVFNNLCFKDSVSWVAMISG-------------------------------FSQNGYERE 197
KV++ + K++VS MISG +++N + E
Sbjct: 69 KVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDE 128
Query: 198 AILLFCQM--HILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETF--VCN 253
A LF QM T+P ++ L C Q H K GF + F V N
Sbjct: 129 AFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSN 188
Query: 254 ALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKP 313
L+ Y L A +F ++ ++D VT+N+LI+G + G +++ LF KM+ +P
Sbjct: 189 VLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQP 248
Query: 314 DCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFF 373
T + ++ A + F G+QLH+ ++ G S+D V +LD Y K V F
Sbjct: 249 SDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLF 308
Query: 374 LTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALS 433
+ V +NV++ +Y Q + S F++MQ G + + T+L +L +L
Sbjct: 309 DEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ 368
Query: 434 LGEQIHTQ-----------LGN-----------LNTAQEILRRLPEDDVVSWTAMIVGFV 471
+G Q+H Q +GN A+ I + LP+ VSWTA+I G+V
Sbjct: 369 MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 472 QHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLS 531
Q G+ G L+LF +M +++D F++ + A A +L G+Q+HA SG +++
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 532 IGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVG 591
G+ L+ +YA+CG I++A VF ++ ++ +SWN LIS A +G E A+ F++M + G
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 592 VQANLYTFGSVVSAAANLANIKQGKQ-VHAMIIKTGYDSETEASNSLITLYAKCGSIDDA 650
+Q + + V++A ++ ++QG + AM G + + ++ L + G +A
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608
Query: 651 KREFLEMP-EKNEVSWNAMITGFSQH 675
++ EMP E +E+ W++++ H
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIH 634
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/634 (24%), Positives = 283/634 (44%), Gaps = 37/634 (5%)
Query: 15 WLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKR 74
+++E L G + A+K++ ++ V + + ++ +GD+ SA +FD M R
Sbjct: 53 FIVEDLLRRGQVSAARKVYDEMPH----KNTVSTNTMISGHVKTGDVSSARDLFDAMPDR 108
Query: 75 TVFSWNKLISGFVAKKLSGRVLGLFLQMIDDD--VIPNEATFVGVLRACIGSGNVAVQCV 132
TV +W L+ + LF QM +P+ TF +L C + V V
Sbjct: 109 TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC--NDAVPQNAV 166
Query: 133 NQIHGLIISHGFGGSPL--ISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFS 190
Q+H + GF +P +SN L+ Y + +D A +F + KDSV++ +I+G+
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 191 QNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETF 250
++G E+I LF +M G P+ + S L A + F +G+Q H L GFS +
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 251 VCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDC 310
V N ++ YS+ + +F +M + D V+YN +IS +Q + +L F +MQ
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 311 LKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAY 370
A+++S A++ + + G QLH A+ + V S++D+Y KC E A
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 371 KFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLG 430
F + V W ++ Y Q ++F +M+ L +Q T+ T+L+ S
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 431 ALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWTAMIV 468
+L LG+Q+H + G++ A ++ +P+ + VSW A+I
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 469 GFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ-IHAQSYISGFS 527
+G A+ F +M G+Q D++ ++AC+ + QG + A S I G +
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 528 DDLSIGNALISLYARCGRIQEAYLVFNKID-AKDNISWNGLISG---FAQSGYCEGALQV 583
++ L R GR EA + +++ D I W+ +++ E A +
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 584 FSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQ 617
M ++ A + ++ +AA ++ K+
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 174/396 (43%), Gaps = 12/396 (3%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M + G Q + TF +L+ + +++H + GF + + ++ + Y
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQM----IDDDVIPNEATFVG 116
+ +FD+M + S+N +IS + L F +M D P F
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP----FAT 356
Query: 117 VLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCF 176
+L I + ++Q Q+H + + N L+D+YAK + A+ +F +L
Sbjct: 357 ML--SIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 177 KDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQF 236
+ +VSW A+ISG+ Q G + LF +M ++ L A +G+Q
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 237 HGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYS 296
H I + G F + LV +Y++ G++ A Q+F +M R+ V++N+LIS A G
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 297 DKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTG-EQLHSYAIKVGISKDIIVEGS 355
+ A+ F KM L+PD V++ +++AC+ G G E + + GI+
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC 594
Query: 356 MLDLYVKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
MLDL + A K E + ++W+ +L A
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 41/195 (21%)
Query: 616 KQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQH 675
++V A IIKTG+D++T SN ++ + G + A++ + EMP KN VS N MI+G +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 676 GYALEAINLFEKMKKHDV---------------------------------MPNHVTFVG 702
G A +LF+ M V +P+HVTF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 703 VLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFT----EQ 758
+L C+ + + + + + G P + V ++L ++ C R + E+
Sbjct: 153 LLPGCND-AVPQNAVGQVHAFAVKLGFDTNP--FLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 759 MPIEPDAMVWRTLLS 773
+P E D++ + TL++
Sbjct: 210 IP-EKDSVTFNTLIT 223
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 289/793 (36%), Positives = 445/793 (56%), Gaps = 76/793 (9%)
Query: 178 DSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFH 237
D W IS + + G EA+ +F +M +V IS L FE+ +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE----FELARK-- 116
Query: 238 GLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSD 297
+F + N ++ Y R+ NL A ++F M +RD ++N+++SG AQ G D
Sbjct: 117 --LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 298 KALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSML 357
A +F++M P+ K+ + ++L
Sbjct: 175 DARSVFDRM------PE---------------------------------KNDVSWNALL 195
Query: 358 DLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQY 417
YV+ S +E A F + E +V WN +L + + + E+ Q F M
Sbjct: 196 SAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN--------- 246
Query: 418 TYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFG 477
+R S + G + Q G ++ A+++ P DV +WTAM+ G++Q+ M
Sbjct: 247 -----VRDVVSWNTIITG---YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 478 EALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGF--SDDLSIGNA 535
EA ELF++M + + +S A + QG ++ + ++S N
Sbjct: 299 EARELFDKMPER----------NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNT 348
Query: 536 LISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQAN 595
+I+ YA+CG+I EA +F+K+ +D +SW +I+G++QSG+ AL++F QM + G + N
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 596 LYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFL 655
+F S +S A++ ++ GKQ+H ++K GY++ N+L+ +Y KCGSI++A F
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 656 EMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNE 715
EM K+ VSWN MI G+S+HG+ A+ FE MK+ + P+ T V VLSACSH GLV++
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 716 GLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSAC 775
G +YF +M+ +YG++P +HYAC+VDLLGRAG L A + MP EPDA +W TLL A
Sbjct: 529 GRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS 588
Query: 776 RVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPG 835
RVH N E+ E AA+ + +EPE+S YVLLSN+YA++G+W ++R M+D+GVKK PG
Sbjct: 589 RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPG 648
Query: 836 QSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDP 895
SWIE++N H F VGD HP D+I+ +L L+ R+ + GYV + D+E+E+K+
Sbjct: 649 YSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKER 708
Query: 896 CVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFH 955
V HSE+LA+A+G++ +S PI VIKNLRVC DCHN IK++++I+ R I++RD NRFH
Sbjct: 709 MVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFH 768
Query: 956 HFEGGVCSCRDYW 968
HF+ G CSC DYW
Sbjct: 769 HFKDGSCSCGDYW 781
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 149/559 (26%), Positives = 259/559 (46%), Gaps = 68/559 (12%)
Query: 152 NPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTV 211
N I Y + G + A +VF + SVS+ MISG+ +NG A LF +M V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 212 PTPYAISSAL---SACTKIELFEIGEQFHGLIFKWGFSSETFVC--NALVTLYSRSGNLT 266
I + + ELFEI E VC N +++ Y+++G +
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEI-------------MPERDVCSWNTMLSGYAQNGCVD 174
Query: 267 SAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQ------LDCL--------- 311
A +F +M +++ V++N+L+S Q ++A LF+ + +CL
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 312 ------------KPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDL 359
D V+ ++++ A G QL + +D+ +M+
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDES----PVQDVFTWTAMVSG 290
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
Y++ VE A + F N V WN ML Y Q + + ++F M ++ T+
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TW 346
Query: 420 PTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEA 479
T++ + Q G ++ A+ + ++P+ D VSW AMI G+ Q G EA
Sbjct: 347 NTMITG-------------YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 480 LELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISL 539
L LF +ME +G + + FSSA+S CA + AL G+Q+H + G+ +GNAL+ +
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453
Query: 540 YARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTF 599
Y +CG I+EA +F ++ KD +SWN +I+G+++ G+ E AL+ F M + G++ + T
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 600 GSVVSAAANLANIKQGKQ-VHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMP 658
+V+SA ++ + +G+Q + M G ++ ++ L + G ++DA MP
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Query: 659 -EKNEVSWNAMITGFSQHG 676
E + W ++ HG
Sbjct: 574 FEPDAAIWGTLLGASRVHG 592
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/553 (25%), Positives = 244/553 (44%), Gaps = 87/553 (15%)
Query: 55 YLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATF 114
YL +G+ + A K+FD+M +R + SWN +I G+V + G+ LF M + DV
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----- 159
Query: 115 VGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNL 174
N ++ YA+NG +D A+ VF+ +
Sbjct: 160 ------------------------------------WNTMLSGYAQNGCVDDARSVFDRM 183
Query: 175 CFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGE 234
K+ VSW A++S + QN EA +LF V + + K ++ E +
Sbjct: 184 PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK---KKKIVEARQ 240
Query: 235 QFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCG 294
F + + + N ++T Y++SG + A Q+F + +D T+ +++SG Q
Sbjct: 241 FFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295
Query: 295 YSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLH--SYAIKVGISKDIIV 352
++A ELF+KM P+ + VS A + + GE++ V +++
Sbjct: 296 MVEEARELFDKM------PE----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 353 EGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGL 412
+M+ Y +C + A F + V W M+ Y Q E+ ++F QM+ EG
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 413 TPNQYTYPTILRTCTSLGALSLGEQIHTQL----------------------GNLNTAQE 450
N+ ++ + L TC + AL LG+Q+H +L G++ A +
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 451 ILRRLPEDDVVSWTAMIVGFVQHGMFGE-ALELFEEMENQGIQSDNIGFSSAISACAGIQ 509
+ + + D+VSW MI G+ +HG FGE AL FE M+ +G++ D+ + +SAC+
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHG-FGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Query: 510 ALNQGRQ-IHAQSYISGFSDDLSIGNALISLYARCGRIQEAY-LVFNKIDAKDNISWNGL 567
+++GRQ + + G + ++ L R G +++A+ L+ N D W L
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Query: 568 ISGFAQSGYCEGA 580
+ G E A
Sbjct: 585 LGASRVHGNTELA 597
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 152/344 (44%), Gaps = 32/344 (9%)
Query: 433 SLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQ 492
SL TQ+ T + L + + D+ W I +++ G EAL +F+ M +
Sbjct: 39 SLKRATQTQIQKSQT--KPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMP----R 92
Query: 493 SDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLV 552
++ ++ IS R++ + DL N +I Y R + +A +
Sbjct: 93 WSSVSYNGMISGYLRNGEFELARKLFDEMP----ERDLVSWNVMIKGYVRNRNLGKAREL 148
Query: 553 FNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANI 612
F + +D SWN ++SG+AQ+G + A VF +M + N ++ +++SA + +
Sbjct: 149 FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKM 204
Query: 613 KQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGF 672
++ M+ K+ + + N L+ + K I +A++ F M ++ VSWN +ITG+
Sbjct: 205 EEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGY 260
Query: 673 SQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPK 732
+Q G EA LF++ DV T+ ++S +V E F+ M P+
Sbjct: 261 AQSGKIDEARQLFDESPVQDVF----TWTAMVSGYIQNRMVEEARELFDKM-------PE 309
Query: 733 PEHYACVVDLLG--RAGCLSRAREFTEQMPIEPDAMVWRTLLSA 774
+ L G + + A+E + MP + W T+++
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITG 352
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
ME G + N +F L C +L K++HG+++K G++ + + +Y G
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
++ A +F +M+ + + SWN +I+G+ L F M + + P++AT V VL A
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNP--LIDLYAKNGFIDSAKKVFNNLCFK- 177
C +G V + + ++ +G P + ++DL + G ++ A + N+ F+
Sbjct: 520 CSHTGLVD---KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 178 DSVSWVAMISGFSQNG 193
D+ W ++ +G
Sbjct: 577 DAAIWGTLLGASRVHG 592
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 605 AAANLANIKQGKQVHAM------IIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMP 658
AAN ++K+ Q ++K G DS+ + N I+ Y + G ++A R F MP
Sbjct: 33 GAANFHSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMP 91
Query: 659 EKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLR 718
+ VS+N MI+G+ ++G A LF++M + D++ +V G + ++G E
Sbjct: 92 RWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRN-RNLGKARE--- 147
Query: 719 YFESMSTEYGLVPKPEHYACVVDLL----GRAGCLSRAREFTEQMPIEPDAMVWRTLLSA 774
FE M PE C + + + GC+ AR ++MP E + + W LLSA
Sbjct: 148 LFEIM---------PERDVCSWNTMLSGYAQNGCVDDARSVFDRMP-EKNDVSWNALLSA 197
Query: 775 CRVHKNME 782
+ ME
Sbjct: 198 YVQNSKME 205
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust.
Identities = 294/896 (32%), Positives = 490/896 (54%), Gaps = 38/896 (4%)
Query: 103 IDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSP-----LISNPLIDL 157
+ ++ P EA F VL C AV Q+H I F P ++ L+ +
Sbjct: 73 VSENNSPVEA-FAYVLELC--GKRRAVSQGRQLHSRI----FKTFPSFELDFLAGKLVFM 125
Query: 158 YAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAI 217
Y K G +D A+KVF+ + + + +W MI + NG A+ L+ M + G +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 218 SSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQ 277
+ L AC K+ G + H L+ K G+ S F+ NALV++Y+++ +L++A ++F Q+
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 278 R-DGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQ 336
+ D V +NS++S + G S + LELF +M + P+ T+ S ++AC + G++
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 337 LHSYAIKVGI-SKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLN 395
+H+ +K S ++ V +++ +Y +C + A + +VV WN ++ Y Q
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 396 DLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL------GNLNTAQ 449
E+ + F M G ++ + +I+ L L G ++H + NL
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 450 EILR----------------RLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQS 493
++ R+ + D++SWT +I G+ Q+ EALELF ++ + ++
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 494 DNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVF 553
D + S + A + ++++ ++IH G D + I N L+ +Y +C + A VF
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVF 544
Query: 554 NKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIK 613
I KD +SW +IS A +G A+++F +M + G+ A+ ++SAAA+L+ +
Sbjct: 545 ESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALN 604
Query: 614 QGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFS 673
+G+++H +++ G+ E + +++ +YA CG + AK F + K + + +MI +
Sbjct: 605 KGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG 664
Query: 674 QHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKP 733
HG A+ LF+KM+ +V P+H++F+ +L ACSH GL++EG + + M EY L P P
Sbjct: 665 MHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWP 724
Query: 734 EHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLE 793
EHY C+VD+LGRA C+ A EF + M EP A VW LL+ACR H EIGE AA LLE
Sbjct: 725 EHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE 784
Query: 794 LEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDR 853
LEP++ VL+SN++A G+W+ +++R MK G++K PG SWIE+ +H F D+
Sbjct: 785 LEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDK 844
Query: 854 LHPLADKIYDYLGNLNRRVA-EIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLS 912
HP + +IY+ L + R++ E+GYV + ++++ +K ++ HSE++AIA+GLL
Sbjct: 845 SHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLR 904
Query: 913 LSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
D + + KNLRVC DCH + K VSK+ R IV+RDANRFHHFE G+CSC D W
Sbjct: 905 TPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 307 bits (786), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/693 (28%), Positives = 354/693 (51%), Gaps = 32/693 (4%)
Query: 11 QTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGE-QVLCDKFFNIYLTSGDLDSAMKIFD 69
+ F ++LE C ++ + +++H +I K E L K +Y G LD A K+FD
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 70 DMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAV 129
+M RT F+WN +I +V+ L L+ M + V ++F +L+AC + +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD--I 198
Query: 130 QCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFK-DSVSWVAMISG 188
+ +++H L++ G+ + I N L+ +YAKN + +A+++F+ K D+V W +++S
Sbjct: 199 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 189 FSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWG-FSS 247
+S +G E + LF +MH+ G P Y I SAL+AC ++G++ H + K SS
Sbjct: 259 YSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 248 ETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQ 307
E +VCNAL+ +Y+R G + AE+I +M D VT+NSLI G Q +ALE F M
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 308 LDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVE 367
K D V++ S+++A + G +LH+Y IK G ++ V +++D+Y KC+
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 438
Query: 368 TAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCT 427
+ FL ++++ W ++ Y Q + E+ ++F+ + + + ++ +ILR +
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Query: 428 SLGALSLGEQIHTQL---------------------GNLNTAQEILRRLPEDDVVSWTAM 466
L ++ + ++IH + N+ A + + DVVSWT+M
Sbjct: 499 VLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSM 558
Query: 467 IVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGF 526
I +G EA+ELF M G+ +D++ +SA A + ALN+GR+IH GF
Sbjct: 559 ISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGF 618
Query: 527 SDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQ 586
+ SI A++ +YA CG +Q A VF++I+ K + + +I+ + G + A+++F +
Sbjct: 619 CLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDK 678
Query: 587 MTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSE--TEASNSLITLYAKC 644
M V + +F +++ A ++ + +G+ I++ Y+ E E L+ + +
Sbjct: 679 MRHENVSPDHISFLALLYACSHAGLLDEGRGF-LKIMEHEYELEPWPEHYVCLVDMLGRA 737
Query: 645 GSIDDAKREFLEM--PEKNEVSWNAMITGFSQH 675
+ +A EF++M E W A++ H
Sbjct: 738 NCVVEA-FEFVKMMKTEPTAEVWCALLAACRSH 769
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 211/433 (48%), Gaps = 25/433 (5%)
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDI-IVEGSMLDL 359
E F+++ + A ++ C A G QLHS K S ++ + G ++ +
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
Y KC ++ A K F WN M+ AY + + + ++ M+ EG+ ++
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 420 PTILRTCTSLGALSLGEQIHTQLGNL------------------NTAQEILRRL-----P 456
P +L+ C L + G ++H+ L L N RRL
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 457 EDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ 516
+ D V W +++ + G E LELF EM G ++ SA++AC G G++
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 517 IHAQSYISG-FSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSG 575
IHA S S +L + NALI++Y RCG++ +A + +++ D ++WN LI G+ Q+
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 576 YCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASN 635
+ AL+ FS M G +++ + S+++A+ L+N+ G ++HA +IK G+DS + N
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 636 SLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMP 695
+LI +Y+KC R FL M +K+ +SW +I G++Q+ +EA+ LF + K +
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 696 NHVTFVGVLSACS 708
+ + +L A S
Sbjct: 486 DEMILGSILRASS 498
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/539 (24%), Positives = 260/539 (48%), Gaps = 27/539 (5%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M G+ +F LL+ C + ++H ++KLG+ + + ++Y + D
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDD 232
Query: 61 LDSAMKIFDDMSKR-TVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLR 119
L +A ++FD ++ WN ++S + S L LF +M PN T V L
Sbjct: 233 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALT 292
Query: 120 ACIGSGNVAVQCVNQIHGLIISHGFGGSPL-ISNPLIDLYAKNGFIDSAKKVFNNLCFKD 178
AC G + +IH ++ S L + N LI +Y + G + A+++ + D
Sbjct: 293 ACDGFSYAKLG--KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNAD 350
Query: 179 SVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHG 238
V+W ++I G+ QN +EA+ F M G +++S ++A ++ G + H
Sbjct: 351 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA 410
Query: 239 LIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDK 298
+ K G+ S V N L+ +YS+ + F +M +D +++ ++I+G AQ +
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVE 470
Query: 299 ALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLD 358
ALELF + ++ D + + S++ A + + + +++H + ++ G+ D +++ ++D
Sbjct: 471 ALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVD 529
Query: 359 LYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYT 418
+Y KC ++ A + F + + ++VV W M+ + + SE+ ++F++M GL+ +
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 419 YPTILRTCTSLGALSLGEQIHTQL----------------------GNLNTAQEILRRLP 456
IL SL AL+ G +IH L G+L +A+ + R+
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649
Query: 457 EDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGR 515
++ +T+MI + HG A+ELF++M ++ + D+I F + + AC+ L++GR
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 708
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 151/303 (49%), Gaps = 10/303 (3%)
Query: 474 GMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLS-I 532
G+ EA + + EN S F+ + C +A++QGRQ+H++ + + S +L +
Sbjct: 62 GVLTEAFQRLDVSENN---SPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFL 118
Query: 533 GNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGV 592
L+ +Y +CG + +A VF+++ + +WN +I + +G AL ++ M GV
Sbjct: 119 AGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV 178
Query: 593 QANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKR 652
L +F +++ A A L +I+ G ++H++++K GY S N+L+++YAK + A+R
Sbjct: 179 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 653 EFLEMPEKNE-VSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVG 711
F EK + V WN++++ +S G +LE + LF +M PN T V L+AC
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 712 LVNEGLRYFESMSTEYGLVPKPEHYAC--VVDLLGRAGCLSRAREFTEQMPIEPDAMVWR 769
G S+ E Y C ++ + R G + +A QM D + W
Sbjct: 299 YAKLGKEIHASVLKSS--THSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWN 355
Query: 770 TLL 772
+L+
Sbjct: 356 SLI 358
Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 192/413 (46%), Gaps = 38/413 (9%)
Query: 25 SLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAM-KIFDDMSKRTVFSWNKLI 83
+LL ++H ++K G+D + + ++Y + +L M + F M + + SW +I
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMY-SKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 84 SGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHG 143
+G+ L LF + + +E +LRA S ++ V +IH I+ G
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA--SSVLKSMLIVKEIHCHILRKG 517
Query: 144 FGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFC 203
+ +I N L+D+Y K + A +VF ++ KD VSW +MIS + NG E EA+ LF
Sbjct: 518 LLDT-VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 576
Query: 204 QMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSG 263
+M G A+ LSA + G + H + + GF E + A+V +Y+ G
Sbjct: 577 RMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCG 636
Query: 264 NLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVS 323
+L SA+ +F +++++ + Y S+I+ G A+ELF+KM+ + + PD ++ +L+
Sbjct: 637 DLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 696
Query: 324 ACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVL 383
AC+ G G G K I+E +++ L E+ V
Sbjct: 697 ACSHAGLLDEGR---------GFLK--IME----------------HEYELEPWPEHYVC 729
Query: 384 WNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGE 436
ML G+ N + E+F+ K M+TE P + +L C S +GE
Sbjct: 730 LVDML---GRANCVVEAFEFVKMMKTE---PTAEVWCALLAACRSHSEKEIGE 776
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 278/805 (34%), Positives = 458/805 (56%), Gaps = 29/805 (3%)
Query: 189 FSQNGYEREAILLFCQMHILGTVPT-PYAISSALSACTKIELFEIGEQFHGLIFKWGFSS 247
F ++G A+ L C + G P + S L C + + G++ I GF
Sbjct: 71 FCESGNLENAVKLLC---VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVI 127
Query: 248 ETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQ 307
++ + + L +Y+ G+L A ++F +++ + +N L++ LA+ G ++ LF+KM
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 308 LDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVE 367
++ D T + + + +S+ + GEQLH + +K G + V S++ Y+K V+
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 368 TAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCT 427
+A K F +V+ WN ++ Y + +F QM G+ + T ++ C
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 428 SLGALSLGEQIHT----------------------QLGNLNTAQEILRRLPEDDVVSWTA 465
+SLG +H+ + G+L++A+ + R + + VVS+T+
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 466 MIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISG 525
MI G+ + G+ GEA++LFEEME +GI D ++ ++ CA + L++G+++H +
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 526 FSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFS 585
D+ + NAL+ +YA+CG +QEA LVF+++ KD ISWN +I G++++ Y AL +F+
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 586 QM-TQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKC 644
+ + + T V+ A A+L+ +G+++H I++ GY S+ +NSL+ +YAKC
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 645 GSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVL 704
G++ A F ++ K+ VSW MI G+ HG+ EAI LF +M++ + + ++FV +L
Sbjct: 548 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 705 SACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPD 764
ACSH GLV+EG R+F M E + P EHYAC+VD+L R G L +A F E MPI PD
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD 667
Query: 765 AMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQI 824
A +W LL CR+H ++++ E A + ELEPE++ YVL++NIYA A KW+ ++R+
Sbjct: 668 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKR 727
Query: 825 MKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQ-GRYS 883
+ RG++K PG SWIE+K ++ F GD +P + I +L + R+ E GY +Y+
Sbjct: 728 IGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYA 787
Query: 884 LWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISN 943
L D E+ +K+ + HSEKLA+A G++S I V KNLRVC DCH KF+SK++
Sbjct: 788 LI-DAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTR 846
Query: 944 RTIVVRDANRFHHFEGGVCSCRDYW 968
R IV+RD+NRFH F+ G CSCR +W
Sbjct: 847 REIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/590 (27%), Positives = 285/590 (48%), Gaps = 33/590 (5%)
Query: 9 NSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIF 68
+ +T +L+ C SL + K++ I GF + L K +Y GDL A ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 69 DDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVA 128
D++ WN L++ +GLF +M+ V + TF +C+ +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF-----SCVSKSFSS 207
Query: 129 VQCVN---QIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAM 185
++ V+ Q+HG I+ GFG + N L+ Y KN +DSA+KVF+ + +D +SW ++
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 186 ISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGF 245
I+G+ NG + + +F QM + G I S + C L +G H + K F
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 246 SSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEK 305
S E CN L+ +YS+ G+L SA+ +F +M R V+Y S+I+G A+ G + +A++LFE+
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 306 MQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSD 365
M+ + + PD TV ++++ CA G+++H + + + DI V +++D+Y KC
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 366 VETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEG-LTPNQYTYPTILR 424
++ A F ++++ WN ++ Y + +E+ +F + E +P++ T +L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 425 TCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVS 462
C SL A G +IH + G L A + + D+VS
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 463 WTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQG-RQIHAQS 521
WT MI G+ HG EA+ LF +M GI++D I F S + AC+ +++G R +
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 522 YISGFSDDLSIGNALISLYARCGRIQEAY-LVFNKIDAKDNISWNGLISG 570
+ + ++ + AR G + +AY + N D W L+ G
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 245/436 (56%), Gaps = 3/436 (0%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M G++ +S TF + + S S+ +++HG ILK GF + + YL +
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
+DSA K+FD+M++R V SWN +I+G+V+ L+ + L +F+QM+ + + AT V V
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
C S +++ +H + + F N L+D+Y+K G +DSAK VF + + V
Sbjct: 306 CADSRLISLG--RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
S+ +MI+G+++ G EA+ LF +M G P Y +++ L+ C + L + G++ H I
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
+ + FV NAL+ +Y++ G++ AE +FS+M+ +D +++N++I G ++ Y+++AL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 301 ELFE-KMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDL 359
LF ++ PD TVA ++ ACAS+ AF G ++H Y ++ G D V S++D+
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
Y KC + A+ F ++++V W VM+ YG E+ +F QM+ G+ ++ ++
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 420 PTILRTCTSLGALSLG 435
++L C+ G + G
Sbjct: 604 VSLLYACSHSGLVDEG 619
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/786 (35%), Positives = 425/786 (54%), Gaps = 72/786 (9%)
Query: 255 LVTLYSRSGNLTSAEQIFSKMQQRDGVTY--NSLISGLAQCGYSDKALELFEKMQLDCLK 312
L++ Y G L+ A + + D Y NSLI G ++K L LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 313 PDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKF 372
PD T + AC + + R GE H+ ++ G ++ V +++ +Y +C + A K
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 373 FLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTE-GLTPNQYTYPTILRTCTSLGA 431
F +VV WN ++ +Y +L + ++F +M E G P+ T +L C SLG
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 432 LSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVG 469
SLG+Q+H + G ++ A + + DVVSW AM+ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 470 FVQHGMFGEALELFEEMENQGIQSDNIGFSSAISA------------------------- 504
+ Q G F +A+ LFE+M+ + I+ D + +S+AIS
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 505 ----------CAGIQALNQGRQIHAQSYI-------SGFSDDLSIGNALISLYARCGRIQ 547
CA + AL G++IH + +G D+ + N LI +YA+C ++
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 548 EAYLVFNKIDAK--DNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQA--NLYTFGSVV 603
A +F+ + K D ++W +I G++Q G AL++ S+M + Q N +T +
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 604 SAAANLANIKQGKQVHAMIIKTGYDS-ETEASNSLITLYAKCGSIDDAKREFLEMPEKNE 662
A A+LA ++ GKQ+HA ++ ++ SN LI +YAKCGSI DA+ F M KNE
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 663 VSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFES 722
V+W +++TG+ HGY EA+ +F++M++ + VT + VL ACSH G++++G+ YF
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 723 MSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNME 782
M T +G+ P PEHYAC+VDLLGRAG L+ A E+MP+EP +VW LS CR+H +E
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 783 IGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVK 842
+GEYAA + EL +Y LLSN+YA AG+W +IR +M+ +GVKK PG SW+E
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGI 724
Query: 843 NSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSE 902
FFVGD+ HP A +IY L + +R+ +IGYV D++ E+KD ++ HSE
Sbjct: 725 KGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSE 784
Query: 903 KLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVC 962
KLA+A+G+L+ I + KNLRVC DCH ++S+I + I++RD++RFHHF+ G C
Sbjct: 785 KLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSC 844
Query: 963 SCRDYW 968
SC+ YW
Sbjct: 845 SCKGYW 850
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/599 (27%), Positives = 275/599 (45%), Gaps = 78/599 (13%)
Query: 25 SLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDM--SKRTVFSWNKL 82
++ + K IH K+L G L + Y++ G L A+ + S V+ WN L
Sbjct: 40 TISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 98
Query: 83 ISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVA-VQCVNQIHGLIIS 141
I + + + L LF M P+ TF V +AC G ++ V+C H L +
Sbjct: 99 IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKAC---GEISSVRCGESAHALSLV 155
Query: 142 HGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILL 201
GF + + N L+ +Y++ + A+KVF+ + D VSW ++I +++ G + A+ +
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 202 FCQM-HILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYS 260
F +M + G P + + L C + +G+Q H FV N LV +Y+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 261 RSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLD----------- 309
+ G + A +FS M +D V++N++++G +Q G + A+ LFEKMQ +
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 310 -----------------C-------LKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVG 345
C +KP+ VT+ S++S CASVGA G+++H YAIK
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 346 IS-------KDIIVEGSMLDLYVKCSDVETAYKFF--LTTETENVVLWNVMLVAYGQLND 396
I + +V ++D+Y KC V+TA F L+ + +VV W VM+ Y Q D
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 397 LSESFQIFKQMQTEG--LTPNQYTYPTILRTCTSLGALSLGEQIH--------------- 439
+++ ++ +M E PN +T L C SL AL +G+QIH
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 440 --------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGI 491
+ G+++ A+ + + + V+WT+++ G+ HG EAL +F+EM G
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 492 QSDNIGFSSAISACAGIQALNQGRQ-IHAQSYISGFSDDLSIGNALISLYARCGRIQEA 549
+ D + + AC+ ++QG + + + G S L+ L R GR+ A
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 233/538 (43%), Gaps = 74/538 (13%)
Query: 9 NSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIF 68
++ TF ++ + C S+ + H L GF + + +Y L A K+F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 69 DDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDD-DVIPNEATFVGVLRACIGSGNV 127
D+MS V SWN +I + L +F +M ++ P+ T V VL C G
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 128 AVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMIS 187
++ Q+H ++ + + N L+D+YAK G +D A VF+N+ KD VSW AM++
Sbjct: 246 SLG--KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 188 GFSQNGYEREAILLF----------------------------------C-QMHILGTVP 212
G+SQ G +A+ LF C QM G P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 213 TPYAISSALSACTKIELFEIGEQFHGLIFKW-------GFSSETFVCNALVTLYSRSGNL 265
+ S LS C + G++ H K+ G E V N L+ +Y++ +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 266 TSAEQIFSKM--QQRDGVTYNSLISGLAQCGYSDKALELFEKM-QLDC-LKPDCVTVASL 321
+A +F + ++RD VT+ +I G +Q G ++KALEL +M + DC +P+ T++
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 322 VSACASVGAFRTGEQLHSYAIKVGISK-DIIVEGSMLDLYVKCSDVETAYKFFLTTETEN 380
+ ACAS+ A R G+Q+H+YA++ + + V ++D+Y KC + A F +N
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 381 VVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHT 440
V W ++ YG E+ IF +M+ G + T +L C+ G + G +
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 441 QL-----------------------GNLNTAQEILRRLP-EDDVVSWTAMIVGFVQHG 474
++ G LN A ++ +P E V W A + HG
Sbjct: 604 RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 196/421 (46%), Gaps = 59/421 (14%)
Query: 428 SLGALSLGEQIH-----TQLGNLNTAQEILRRLPEDD--VVSWTAMIVGFVQHGMFGEAL 480
S G L+L H +G L+ A +LRR P D V W ++I + +G + L
Sbjct: 53 SFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCL 112
Query: 481 ELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLY 540
LF M + DN F AC I ++ G HA S ++GF ++ +GNAL+++Y
Sbjct: 113 YLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMY 172
Query: 541 ARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMT-QVGVQANLYTF 599
+RC + +A VF+++ D +SWN +I +A+ G + AL++FS+MT + G + + T
Sbjct: 173 SRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITL 232
Query: 600 GSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPE 659
+V+ A+L GKQ+H + + N L+ +YAKCG +D+A F M
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 660 KNEVSWNAMITGFSQHGYALEAINLFEKMK----KHDVM--------------------- 694
K+ VSWNAM+ G+SQ G +A+ LFEKM+ K DV+
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 695 ----------PNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYA------- 737
PN VT + VLS C+ VG + G + + +Y + + +
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHG-KEIHCYAIKYPIDLRKNGHGDENMVIN 411
Query: 738 CVVDLLGRAGCLSRAREFTEQM-PIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEP 796
++D+ + + AR + + P E D + W ++ H + AN LEL
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD-------ANKALELLS 464
Query: 797 E 797
E
Sbjct: 465 E 465
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 148/290 (51%), Gaps = 19/290 (6%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFD-------GEQVLCDKFFN 53
M GI+ N T + +L GC S G+L+ K+IH +K D E ++ ++ +
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 54 IYLTSGDLDSAMKIFDDMS--KRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDD--VIP 109
+Y +D+A +FD +S +R V +W +I G+ + + L L +M ++D P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 110 NEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPL-ISNPLIDLYAKNGFIDSAK 168
N T L AC + A++ QIH + + PL +SN LID+YAK G I A+
Sbjct: 476 NAFTISCALVAC--ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 169 KVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIE 228
VF+N+ K+ V+W ++++G+ +GY EA+ +F +M +G + L AC+
Sbjct: 534 LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 229 LFEIG-EQFHGLIFKWGFS--SETFVCNALVTLYSRSGNLTSAEQIFSKM 275
+ + G E F+ + +G S E + C LV L R+G L +A ++ +M
Sbjct: 594 MIDQGMEYFNRMKTVFGVSPGPEHYAC--LVDLLGRAGRLNAALRLIEEM 641
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/740 (36%), Positives = 416/740 (56%), Gaps = 34/740 (4%)
Query: 255 LVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDC-LKP 313
LV LY GN+ A F +Q RD +N +ISG + G S + + F L L P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 314 DCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFF 373
D T S++ AC +V G ++H A+K G D+ V S++ LY + V A F
Sbjct: 152 DYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 374 LTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTP-NQYTYPTILRTCTSLGAL 432
++ WN M+ Y Q + E+ + + GL + T ++L CT G
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDF 263
Query: 433 SLGEQIHT----------------------QLGNLNTAQEILRRLPEDDVVSWTAMIVGF 470
+ G IH+ + G L Q++ R+ D++SW ++I +
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 471 VQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISG-FSDD 529
+ A+ LF+EM IQ D + S S + + + R + + G F +D
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 530 LSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQ 589
++IGNA++ +YA+ G + A VFN + D ISWN +ISG+AQ+G+ A+++++ M +
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 590 VG-VQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSID 648
G + AN T+ SV+ A + ++QG ++H ++K G + SL +Y KCG ++
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLE 503
Query: 649 DAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACS 708
DA F ++P N V WN +I HG+ +A+ LF++M V P+H+TFV +LSACS
Sbjct: 504 DALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
Query: 709 HVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVW 768
H GLV+EG FE M T+YG+ P +HY C+VD+ GRAG L A +F + M ++PDA +W
Sbjct: 564 HSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIW 623
Query: 769 RTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDR 828
LLSACRVH N+++G+ A+ HL E+EPE +VLLSN+YA+AGKW+ D+IR I +
Sbjct: 624 GALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGK 683
Query: 829 GVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDL 888
G++K PG S +EV N + F+ G++ HP+ +++Y L L ++ IGYV + D+
Sbjct: 684 GLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDV 743
Query: 889 EQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVV 948
E ++K+ + HSE+LAIAF L++ I + KNLRVC DCH+ KF+SKI+ R I+V
Sbjct: 744 EDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIV 803
Query: 949 RDANRFHHFEGGVCSCRDYW 968
RD+NRFHHF+ GVCSC DYW
Sbjct: 804 RDSNRFHHFKNGVCSCGDYW 823
Score = 243 bits (619), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 285/575 (49%), Gaps = 40/575 (6%)
Query: 25 SLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLIS 84
+L AK +H +++ + K N+Y G++ A FD + R V++WN +IS
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 85 GFVAKKLSGRVLGLF-LQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHG 143
G+ S V+ F L M+ + P+ TF VL+AC V N+IH L + G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC-----RTVIDGNKIHCLALKFG 180
Query: 144 FGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFC 203
F ++ LI LY++ + +A+ +F+ + +D SW AMISG+ Q+G +EA+ L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 204 QMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSG 263
+ + +V + S LSACT+ F G H K G SE FV N L+ LY+ G
Sbjct: 241 GLRAMDSV----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 264 NLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVS 323
L +++F +M RD +++NS+I +A+ LF++M+L ++PDC+T+ SL S
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 324 ACASVGAFRTGEQLHSYAIKVG-ISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVV 382
+ +G R + + ++ G +DI + +++ +Y K V++A F +V+
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Query: 383 LWNVMLVAYGQLNDLSESFQIFKQMQTEG-LTPNQYTYPTILRTCTSLGALSLGEQIHTQ 441
WN ++ Y Q SE+ +++ M+ EG + NQ T+ ++L C+ GAL G ++H +
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 442 L----------------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEA 479
L G L A + ++P + V W +I HG +A
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 536
Query: 480 LELFEEMENQGIQSDNIGFSSAISACAGIQALNQGR---QIHAQSYISGFSDDLSIGNAL 536
+ LF+EM ++G++ D+I F + +SAC+ +++G+ ++ Y G + L +
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY--GITPSLKHYGCM 594
Query: 537 ISLYARCGRIQEAYLVFNKIDAKDNIS-WNGLISG 570
+ +Y R G+++ A + + + S W L+S
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 193/391 (49%), Gaps = 7/391 (1%)
Query: 5 GIQA-NSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDS 63
G++A +S T V LL C G IH +K G + E + +K ++Y G L
Sbjct: 241 GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 64 AMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIG 123
K+FD M R + SWN +I + + R + LF +M + P+ T + + A I
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL--ASIL 358
Query: 124 SGNVAVQCVNQIHGLIISHG-FGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSW 182
S ++ + G + G F I N ++ +YAK G +DSA+ VFN L D +SW
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 183 VAMISGFSQNGYEREAILLFCQMHILGTVPTPYAI-SSALSACTKIELFEIGEQFHGLIF 241
+ISG++QNG+ EAI ++ M G + S L AC++ G + HG +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 242 KWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALE 301
K G + FV +L +Y + G L A +F ++ + + V +N+LI+ G+ +KA+
Sbjct: 479 KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 538
Query: 302 LFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQ-LHSYAIKVGISKDIIVEGSMLDLY 360
LF++M + +KPD +T +L+SAC+ G G+ GI+ + G M+D+Y
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 361 VKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
+ +ETA KF + + + +W +L A
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 177/366 (48%), Gaps = 25/366 (6%)
Query: 511 LNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISG 570
L + +HA+ +S ++ I L++LY G + A F+ I +D +WN +ISG
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 571 FAQSGYCEGALQVFSQ-MTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDS 629
+ ++G ++ FS M G+ + TF SV+ A + + G ++H + +K G+
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 630 ETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMK 689
+ + SLI LY++ ++ +A+ F EMP ++ SWNAMI+G+ Q G A EA+ L ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 690 KHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCL 749
D VT V +LSAC+ G N G+ S S ++GL + ++DL G L
Sbjct: 244 AMD----SVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 750 SRAREFTEQMPIEPDAMVWRTLLSACRVHKN--MEIGEYAANHLLELEPEDSATYVLLSN 807
++ ++M + D + W +++ A +++ I + L ++P D T + L++
Sbjct: 299 RDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DCLTLISLAS 356
Query: 808 IYAAAGKWDCRDQIRQIMKDRGVKKEPGQSW----IEVKNSIHAFFVGDRLHPLADKIYD 863
I + G IR +G G W I + N++ + L A +++
Sbjct: 357 ILSQLG------DIRACRSVQGFTLRKG--WFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 864 YLGNLN 869
+L N +
Sbjct: 409 WLPNTD 414
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 1 MEERG-IQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSG 59
MEE G I AN T+V +L C G+L + K+HG++LK G + + ++Y G
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 60 DLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLR 119
L+ A+ +F + + WN LI+ + + LF +M+D+ V P+ TFV +L
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 120 ACIGSGNV--AVQCVNQIHGLIISHGFGGSPLISN--PLIDLYAKNGFIDSAKKVFNNLC 175
AC SG V C ++ +G +P + + ++D+Y + G +++A K ++
Sbjct: 561 ACSHSGLVDEGQWCFE-----MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615
Query: 176 FK-DSVSWVAMISGFSQNG 193
+ D+ W A++S +G
Sbjct: 616 LQPDASIWGALLSACRVHG 634
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 9/225 (4%)
Query: 610 ANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMI 669
N++ K +HA ++ + S L+ LY G++ A+ F + ++ +WN MI
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 670 TGFSQHGYALEAINLFEK-MKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYG 728
+G+ + G + E I F M + P++ TF VL AC V N+ ++ ++G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK----IHCLALKFG 180
Query: 729 LVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAA 788
+ A ++ L R + AR ++MP+ D W ++S N + +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALTLS 239
Query: 789 NHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKE 833
N L + DS T V L + AG ++ I G++ E
Sbjct: 240 NGLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/777 (34%), Positives = 422/777 (54%), Gaps = 27/777 (3%)
Query: 215 YAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSK 274
+A + L C + + H I K G + F N L+ Y ++G A +F +
Sbjct: 50 HAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDE 109
Query: 275 MQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTG 334
M +R+ V++ +L G A + L+ ++ + + + S + S+
Sbjct: 110 MPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC 165
Query: 335 EQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQL 394
LHS +K+G + V ++++ Y C V++A F +++V+W ++ Y +
Sbjct: 166 PWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 395 NDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH--------------- 439
+S ++ M+ G PN YT+ T L+ LGA + +H
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 440 -------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQ 492
TQLG+++ A ++ +P++DVV W+ MI F Q+G EA++LF M +
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 493 SDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLV 552
+ SS ++ CA + G Q+H GF D+ + NALI +YA+C ++ A +
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 553 FNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANI 612
F ++ +K+ +SWN +I G+ G A +F + + V TF S + A A+LA++
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 613 KQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGF 672
G QVH + IKT + SNSLI +YAKCG I A+ F EM + SWNA+I+G+
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 673 SQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPK 732
S HG +A+ + + MK D PN +TF+GVLS CS+ GL+++G FESM ++G+ P
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 733 PEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLL 792
EHY C+V LLGR+G L +A + E +P EP M+WR +LSA N E +A +L
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 793 ELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGD 852
++ P+D ATYVL+SN+YA A +W IR+ MK+ GVKKEPG SWIE + +H F VG
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGL 705
Query: 853 RLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLS 912
HP I L LN + GYV R ++ D++ E+KD +++HSE+LA+A+GL+
Sbjct: 706 SDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVR 765
Query: 913 LSDSM-PILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
+ S IL++KNLR+C+DCH+ +K +S I R +V+RD NRFHHF GVCSC D+W
Sbjct: 766 MPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/587 (25%), Positives = 288/587 (49%), Gaps = 32/587 (5%)
Query: 9 NSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIF 68
+S + +L C+ + AK IH ILK G + + N Y+ +G A+ +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 69 DDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVA 128
D+M +R S+ L G+ + +GL+ ++ + N F L+ +
Sbjct: 108 DEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 129 VQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISG 188
+ +H I+ G+ + + LI+ Y+ G +DSA+ VF + KD V W ++S
Sbjct: 164 I--CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 189 FSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSE 248
+ +NGY +++ L M + G +P Y +AL A + F+ + HG I K + +
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281
Query: 249 TFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQL 308
V L+ LY++ G+++ A ++F++M + D V ++ +I+ Q G+ ++A++LF +M+
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 309 DCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVET 368
+ P+ T++S+++ CA GEQLH +KVG DI V +++D+Y KC ++T
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 369 AYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTS 428
A K F ++N V WN ++V Y L + ++F +F++ ++ + T+ + L C S
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 429 LGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWTAM 466
L ++ LG Q+H + G++ AQ + + DV SW A+
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 467 IVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYIS-- 524
I G+ HG+ +AL + + M+++ + + + F +S C+ ++QG++ +S I
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECF-ESMIRDH 580
Query: 525 GFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNIS-WNGLISG 570
G L ++ L R G++ +A + I + ++ W ++S
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 220 bits (560), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 232/491 (47%), Gaps = 26/491 (5%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
+ G + N F L+ +S +H I+KLG+D + N Y G
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
+DSA +F+ + + + W ++S +V L L M +PN TF L+A
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
IG G A +HG I+ + P + L+ LY + G + A KVFN + D V
Sbjct: 257 SIGLG--AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
W MI+ F QNG+ EA+ LF +M VP + +SS L+ C + +GEQ HGL+
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV 374
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
K GF + +V NAL+ +Y++ + +A ++F+++ ++ V++N++I G G KA
Sbjct: 375 VKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAF 434
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLY 360
+F + + + VT +S + ACAS+ + G Q+H AIK +K + V S++D+Y
Sbjct: 435 SMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMY 494
Query: 361 VKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYP 420
KC D++ A F ET +V WN ++ Y ++ +I M+ PN T+
Sbjct: 495 AKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFL 554
Query: 421 TILRTCTSLGALSLGEQIHTQL-----------------------GNLNTAQEILRRLP- 456
+L C++ G + G++ + G L+ A +++ +P
Sbjct: 555 GVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY 614
Query: 457 EDDVVSWTAMI 467
E V+ W AM+
Sbjct: 615 EPSVMIWRAML 625
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 12 TFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDM 71
TF L C S S+ ++HG +K + + + ++Y GD+ A +F++M
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 72 SKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQC 131
V SWN LISG+ L + L + M D D PN TF+GVL C +G + Q
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID-QG 569
Query: 132 VNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVS-WVAMISG-F 189
+I HG ++ L ++G +D A K+ + ++ SV W AM+S
Sbjct: 570 QECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASM 629
Query: 190 SQNGYE 195
+QN E
Sbjct: 630 NQNNEE 635
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 284/891 (31%), Positives = 475/891 (53%), Gaps = 63/891 (7%)
Query: 3 ERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLD 62
E I N TF +L C ++ ++IH ++K+G + ++Y +
Sbjct: 153 ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRIS 212
Query: 63 SAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACI 122
A ++F+ + W L SG+V L + +F +M D+ P+ FV V
Sbjct: 213 DARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV----- 267
Query: 123 GSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSW 182
I+ Y + G + A+ +F + D V+W
Sbjct: 268 --------------------------------INTYIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 183 VAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFK 242
MISG + G E AI F M T + S LSA + ++G H K
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 243 WGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALEL 302
G +S +V ++LV++YS+ + +A ++F +++++ V +N++I G A G S K +EL
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 303 FEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVK 362
F M+ D T SL+S CA+ G Q HS IK ++K++ V +++D+Y K
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 363 CSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTI 422
C +E A + F + V WN ++ +Y Q + SE+F +FK+M G+ + +
Sbjct: 476 CGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAST 535
Query: 423 LRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDV 460
L+ CT + L G+Q+H ++ G + A+++ LPE V
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595
Query: 461 VSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQ 520
VS A+I G+ Q+ + EA+ LF+EM +G+ I F++ + AC ++L G Q H Q
Sbjct: 596 VSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 521 SYISGFSDDLS-IGNALISLYARCGRIQEAYLVFNKIDAKDNIS-WNGLISGFAQSGYCE 578
GFS + +G +L+ +Y + EA +F+++ + +I W G++SG +Q+G+ E
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 579 GALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLI 638
AL+ + +M GV + TF +V+ + L+++++G+ +H++I +D + SN+LI
Sbjct: 715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLI 774
Query: 639 TLYAKCGSIDDAKREFLEMPEK-NEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNH 697
+YAKCG + + + F EM + N VSWN++I G++++GYA +A+ +F+ M++ +MP+
Sbjct: 775 DMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDE 834
Query: 698 VTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTE 757
+TF+GVL+ACSH G V++G + FE M +YG+ + +H AC+VDLLGR G L A +F E
Sbjct: 835 ITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIE 894
Query: 758 QMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDC 817
++PDA +W +LL ACR+H + GE +A L+ELEP++S+ YVLLSNIYA+ G W+
Sbjct: 895 AQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEK 954
Query: 818 RDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNL 868
+ +R++M+DRGVKK PG SWI+V+ H F GD+ H KI +L +L
Sbjct: 955 ANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 332 bits (851), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 221/770 (28%), Positives = 365/770 (47%), Gaps = 64/770 (8%)
Query: 29 AKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVA 88
K +H K L LG D E L + ++Y + A K FD + K V +WN ++S + +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSS 137
Query: 89 KKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSP 148
G+VL F+ + ++ + PN+ TF VL C NV QIH +I G +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFG--RQIHCSMIKMGLERNS 195
Query: 149 LISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHIL 208
L+D+YAK I A++VF + ++V W + SG+ + G EA+L+F +M
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 209 GTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSA 268
G P A FV ++ Y R G L A
Sbjct: 256 GHRPDHLA---------------------------------FV--TVINTYIRLGKLKDA 280
Query: 269 EQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASV 328
+F +M D V +N +ISG + G A+E F M+ +K T+ S++SA V
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 329 GAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVML 388
G +H+ AIK+G++ +I V S++ +Y KC +E A K F E +N V WN M+
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 389 VAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHT-------- 440
Y + + ++F M++ G + +T+ ++L TC + L +G Q H+
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 441 --------------QLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEM 486
+ G L A++I R+ + D V+W +I +VQ EA +LF+ M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 487 ENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRI 546
GI SD +S + AC + L QG+Q+H S G DL G++LI +Y++CG I
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 547 QEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAA 606
++A VF+ + +S N LI+G++Q+ E A+ +F +M GV + TF ++V A
Sbjct: 581 KDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Query: 607 ANLANIKQGKQVHAMIIKTGYDSETEASN-SLITLYAKCGSIDDAKREFLEMPE-KNEVS 664
++ G Q H I K G+ SE E SL+ +Y + +A F E+ K+ V
Sbjct: 640 HKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVL 699
Query: 665 WNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMS 724
W M++G SQ+G+ EA+ +++M+ V+P+ TFV VL CS + + EG R S+
Sbjct: 700 WTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-RAIHSLI 758
Query: 725 TEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSA 774
++D+ + G + + + ++M + + W +L++
Sbjct: 759 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Score = 263 bits (672), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 187/763 (24%), Positives = 337/763 (44%), Gaps = 101/763 (13%)
Query: 127 VAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMI 186
+A++ +H + G + N ++DLYAK + A+K F+ L KD +W +M+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132
Query: 187 SGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFS 246
S +S G + + F + P + S LS C + E G Q H + K G
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 247 SETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKM 306
++ ALV +Y++ ++ A ++F + + V + L SG + G ++A+ +FE+M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 307 QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDV 366
+ + +PD + ++++ Y++ +
Sbjct: 253 RDEGHRPDHLAFVTVINT-----------------------------------YIRLGKL 277
Query: 367 ETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTC 426
+ A F + +VV WNVM+ +G+ + + + F M+ + + T ++L
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 427 TSLGALSLGEQIHTQ---LG-------------------NLNTAQEILRRLPEDDVVSWT 464
+ L LG +H + LG + A ++ L E + V W
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 465 AMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYIS 524
AMI G+ +G + +ELF +M++ G D+ F+S +S CA L G Q H+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 525 GFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVF 584
+ +L +GNAL+ +YA+CG +++A +F ++ +DN++WN +I + Q A +F
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 585 SQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKC 644
+M G+ ++ S + A ++ + QGKQVH + +K G D + +SLI +Y+KC
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 645 GSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVL 704
G I DA++ F +PE + VS NA+I G+SQ+ EA+ LF++M V P+ +TF ++
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIV 636
Query: 705 SACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLG-------------------- 744
AC + G + F T+ G + E+ + LLG
Sbjct: 637 EACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSS 693
Query: 745 ---------------RAGCLSRAREFTEQMP---IEPDAMVWRTLLSACRVHKNMEIGEY 786
+ G A +F ++M + PD + T+L C V ++ G
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 787 AANHLLELEPE-DSATYVLLSNIYAAAGKWDCRDQIRQIMKDR 828
+ + L + D T L ++YA G Q+ M+ R
Sbjct: 754 IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 246/509 (48%), Gaps = 19/509 (3%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M+ G + TF LL C + L + H I+K + + ++Y G
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
L+ A +IF+ M R +WN +I +V + LF +M ++ + A L+A
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
C + Q+H L + G + LID+Y+K G I A+KVF++L V
Sbjct: 539 CTHVHGLYQG--KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
S A+I+G+SQN E EA++LF +M G P+ ++ + AC K E +G QFHG I
Sbjct: 597 SMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 241 FKWGFSSE-TFVCNALVTLYSRSGNLTSAEQIFSKMQQ-RDGVTYNSLISGLAQCGYSDK 298
K GFSSE ++ +L+ +Y S +T A +FS++ + V + ++SG +Q G+ ++
Sbjct: 656 TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE 715
Query: 299 ALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLD 358
AL+ +++M+ D + PD T +++ C+ + + R G +HS + D + +++D
Sbjct: 716 ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLID 775
Query: 359 LYVKCSDVETAYKFF-LTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQY 417
+Y KC D++ + + F NVV WN ++ Y + ++ +IF M+ + P++
Sbjct: 776 MYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEI 835
Query: 418 TYPTILRTCTSLGALSLGEQI-HTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMF 476
T+ +L C+ G +S G +I +G + D V ++ G +
Sbjct: 836 TFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARV------DHVACMVDLL------GRW 883
Query: 477 GEALELFEEMENQGIQSDNIGFSSAISAC 505
G E + +E Q ++ D +SS + AC
Sbjct: 884 GYLQEADDFIEAQNLKPDARLWSSLLGAC 912
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/702 (37%), Positives = 389/702 (55%), Gaps = 88/702 (12%)
Query: 355 SMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTP 414
++L Y K D+++ +FF + V W M+V Y + ++ ++ M EG+ P
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 415 NQYTYPTILRTCTSLGALSLGEQIHT---------------------------------- 440
Q+T +L + + + G+++H+
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 441 -------------------QLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALE 481
Q+G ++ A ++ E D+V+W +MI GF Q G AL+
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 482 LFEEMENQGIQS-DNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLY 540
+F +M + S D +S +SACA ++ L G+QIH+ +GF + NALIS+Y
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 541 ARCGRIQEA-----------------------YL----------VFNKIDAKDNISWNGL 567
+RCG ++ A Y+ +F + +D ++W +
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 568 ISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGY 627
I G+ Q G A+ +F M G + N YT +++S A++LA++ GKQ+H +K+G
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 628 DSETEASNSLITLYAKCGSIDDAKREF-LEMPEKNEVSWNAMITGFSQHGYALEAINLFE 686
SN+LIT+YAK G+I A R F L E++ VSW +MI +QHG+A EA+ LFE
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 687 KMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRA 746
M + P+H+T+VGV SAC+H GLVN+G +YF+ M ++P HYAC+VDL GRA
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 747 GCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLS 806
G L A+EF E+MPIEPD + W +LLSACRVHKN+++G+ AA LL LEPE+S Y L+
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALA 624
Query: 807 NIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLG 866
N+Y+A GKW+ +IR+ MKD VKKE G SWIEVK+ +H F V D HP ++IY +
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMK 684
Query: 867 NLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLR 926
+ + ++GYV S+ DLE+E K+ + HSEKLAIAFGL+S D + ++KNLR
Sbjct: 685 KIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLR 744
Query: 927 VCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
VCNDCH IKF+SK+ R I+VRD RFHHF+ G CSCRDYW
Sbjct: 745 VCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 275/560 (49%), Gaps = 83/560 (14%)
Query: 152 NPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTV 211
N ++ Y+K G +DS + F+ L +DSVSW MI G+ G +AI + M G
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 212 PTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQI 271
PT + +++ L++ E G++ H I K G V N+L+ +Y++ G+ A+ +
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 272 FSKM-------------------------------QQRDGVTYNSLISGLAQCGYSDKAL 300
F +M +RD VT+NS+ISG Q GY +AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 301 ELFEKMQLDCL-KPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDL 359
++F KM D L PD T+AS++SACA++ G+Q+HS+ + G IV +++ +
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
Y +C VETA + T K ++ EG T
Sbjct: 324 YSRCGGVETARRLIEQRGT--------------------------KDLKIEGFT------ 351
Query: 420 PTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEA 479
AL G + +LG++N A+ I L + DVV+WTAMIVG+ QHG +GEA
Sbjct: 352 -----------ALLDG---YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 480 LELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISL 539
+ LF M G + ++ ++ +S + + +L+ G+QIH + SG +S+ NALI++
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 540 YARCGRIQEAYLVFNKIDA-KDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYT 598
YA+ G I A F+ I +D +SW +I AQ G+ E AL++F M G++ + T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 599 FGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNS-LITLYAKCGSIDDAKREFLE- 656
+ V SA + + QG+Q M+ T + + ++ L+ + G + +A+ EF+E
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ-EFIEK 576
Query: 657 MP-EKNEVSWNAMITGFSQH 675
MP E + V+W ++++ H
Sbjct: 577 MPIEPDVVTWGSLLSACRVH 596
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 159/624 (25%), Positives = 279/624 (44%), Gaps = 123/624 (19%)
Query: 29 AKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGF-- 86
A+ +H +++K G L + N+Y +G A K+FD+M RT FSWN ++S +
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 87 --------------------------VAKKLSG------RVLGLFLQMIDDDVIPNEATF 114
V K G RV+G M+ + + P + T
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMG---DMVKEGIEPTQFTL 149
Query: 115 VGVLRACIGSGNVAVQCV---NQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVF 171
VL + A +C+ ++H I+ G G+ +SN L+++YAK G AK VF
Sbjct: 150 TNVLASV-----AATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 172 NNLCF-------------------------------KDSVSWVAMISGFSQNGYEREAIL 200
+ + +D V+W +MISGF+Q GY+ A+
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 201 LFCQMHILGTV-PTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLY 259
+F +M + P + ++S LSAC +E IG+Q H I GF V NAL+++Y
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 260 SRS---------------------------------GNLTSAEQIFSKMQQRDGVTYNSL 286
SR G++ A+ IF ++ RD V + ++
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 287 ISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGI 346
I G Q G +A+ LF M +P+ T+A+++S +S+ + G+Q+H A+K G
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 347 SKDIIVEGSMLDLYVKCSDVETAYKFFLTTETE-NVVLWNVMLVAYGQLNDLSESFQIFK 405
+ V +++ +Y K ++ +A + F E + V W M++A Q E+ ++F+
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 406 QMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTA 465
M EGL P+ TY + CT G ++ G Q + +++ + +P + +
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY------FDMMKDVDKIIPT--LSHYAC 556
Query: 466 MIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISG 525
M+ F + G+ EA E E+M I+ D + + S +SAC + ++ G+ + A+ +
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMP---IEPDVVTWGSLLSACRVHKNIDLGK-VAAERLLLL 612
Query: 526 FSDDLSIGNALISLYARCGRIQEA 549
++ +AL +LY+ CG+ +EA
Sbjct: 613 EPENSGAYSALANLYSACGKWEEA 636
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 215/459 (46%), Gaps = 72/459 (15%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M + GI+ T +L + + KK+H I+KLG G + + N+Y GD
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 61 -------------------------------LDSAMKIFDDMSKRTVFSWNKLISGFVAK 89
+D AM F+ M++R + +WN +ISGF +
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 90 KLSGRVLGLFLQMIDDDVI-PNEATFVGVLRACIGSGNVAVQCV-NQIHGLIISHGFGGS 147
R L +F +M+ D ++ P+ T VL AC N+ C+ QIH I++ GF S
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC---ANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 148 PLISNPLIDLYAKNGFIDSAKK---------------------------------VFNNL 174
++ N LI +Y++ G +++A++ +F +L
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 175 CFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGE 234
+D V+W AMI G+ Q+G EAI LF M G P Y +++ LS + + G+
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 235 QFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ-QRDGVTYNSLISGLAQC 293
Q HG K G V NAL+T+Y+++GN+TSA + F ++ +RD V++ S+I LAQ
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 294 GYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVG-ISKDIIV 352
G++++ALELFE M ++ L+PD +T + SAC G G Q V I +
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 353 EGSMLDLYVKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
M+DL+ + ++ A +F E +VV W +L A
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 33/257 (12%)
Query: 534 NALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQ 593
N ++S Y++ G + F+++ +D++SW +I G+ G A++V M + G++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 594 ANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGS------- 646
+T +V+++ A ++ GK+VH+ I+K G SNSL+ +YAKCG
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 647 ------------------------IDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAI 682
+D A +F +M E++ V+WN+MI+GF+Q GY L A+
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 683 NLFEKMKKHDVM-PNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVD 741
++F KM + ++ P+ T VLSAC+++ + G + + T G ++
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-GFDISGIVLNALIS 322
Query: 742 LLGRAGCLSRAREFTEQ 758
+ R G + AR EQ
Sbjct: 323 MYSRCGGVETARRLIEQ 339
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 152/356 (42%), Gaps = 48/356 (13%)
Query: 12 TFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNI----------------- 54
T +L C + L K+IH I+ GFD ++ + ++
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 55 ----------------YLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGL 98
Y+ GD++ A IF + R V +W +I G+ G + L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 99 FLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLY 158
F M+ PN T +L S ++ QIHG + G S +SN LI +Y
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSV--ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMY 458
Query: 159 AKNGFIDSAKKVFNNL-CFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAI 217
AK G I SA + F+ + C +D+VSW +MI +Q+G+ EA+ LF M + G P
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITY 518
Query: 218 SSALSACTKIELFEIGEQFHGL---IFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSK 274
SACT L G Q+ + + K + + C +V L+ R+G L A++ K
Sbjct: 519 VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC--MVDLFGRAGLLQEAQEFIEK 576
Query: 275 MQ-QRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPD----CVTVASLVSAC 325
M + D VT+ SL+S D E++ L L+P+ +A+L SAC
Sbjct: 577 MPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL--LEPENSGAYSALANLYSAC 630
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 618 VHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGY 677
VH +IK+G N+L+ +Y+K G A++ F EMP + SWN +++ +S+ G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 678 ALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVP 731
F+++ + D V++ ++ ++G ++ +R M E G+ P
Sbjct: 96 MDSTCEFFDQLPQRD----SVSWTTMIVGYKNIGQYHKAIRVMGDMVKE-GIEP 144
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/768 (34%), Positives = 436/768 (56%), Gaps = 37/768 (4%)
Query: 133 NQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQN 192
N +HG II G +SN LI+LY++ G + A+KVF + ++ VSW M+S + +
Sbjct: 64 NVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 193 GYEREAILLFCQM-HILGTVPTPYAISSALSACTKIE------LFEIGEQFHGLIFKWGF 245
G E++++F + P Y +SS + AC+ ++ +F Q + K GF
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF----QLQSFLVKSGF 179
Query: 246 SSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEK 305
+ +V L+ Y + GN+ A +F + ++ VT+ ++ISG + G S +L+LF +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 306 MQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSD 365
+ D + PD +++++SAC+ + G+Q+H++ ++ G+ D + ++D YVKC
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 366 VETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRT 425
V A+K F +N++ W +L Y Q E+ ++F M GL P+ Y +IL +
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 426 CTSLGALSLGEQIHT-----QLGN-----------------LNTAQEILRRLPEDDVVSW 463
C SL AL G Q+H LGN L A+++ DVV +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 464 TAMIVGFVQHGM---FGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQ 520
AMI G+ + G EAL +F +M + I+ + F S + A A + +L +QIH
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 521 SYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGA 580
+ G + D+ G+ALI +Y+ C ++++ LVF+++ KD + WN + +G+ Q E A
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 581 LQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITL 640
L +F ++ + + +TF ++V+AA NLA+++ G++ H ++K G + +N+L+ +
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 641 YAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTF 700
YAKCGS +DA + F ++ V WN++I+ ++ HG +A+ + EKM + PN++TF
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 701 VGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMP 760
VGVLSACSH GLV +GL+ FE M +G+ P+ EHY C+V LLGRAG L++ARE E+MP
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 761 IEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQ 820
+P A+VWR+LLS C N+E+ E+AA + +P+DS ++ +LSNIYA+ G W +
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 821 IRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNL 868
+R+ MK GV KEPG+SWI + +H F D+ H A++IY+ L +L
Sbjct: 779 VRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 338 bits (866), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 204/732 (27%), Positives = 368/732 (50%), Gaps = 35/732 (4%)
Query: 32 IHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKL 91
+HG+I+ G + + L + N+Y +G + A K+F+ M +R + SW+ ++S +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 92 SGRVLGLFLQMIDDDV-IPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLI 150
L +FL+ PNE ++AC G V Q+ ++ GF +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 151 SNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGT 210
LID Y K+G ID A+ VF+ L K +V+W MISG + G ++ LF Q+
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 211 VPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQ 270
VP Y +S+ LSAC+ + E G+Q H I ++G + + N L+ Y + G + +A +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 271 IFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGA 330
+F+ M ++ +++ +L+SG Q +A+ELF M LKPD +S++++CAS+ A
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 331 FRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVA 390
G Q+H+Y IK + D V S++D+Y KC + A K F +VVL+N M+
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 391 YGQLN---DLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGN--- 444
Y +L +L E+ IF+ M+ + P+ T+ ++LR SL +L L +QIH +
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 445 -------------------LNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEE 485
L ++ + + D+V W +M G+VQ EAL LF E
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 486 MENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGR 545
++ + D F++ ++A + ++ G++ H Q G + I NAL+ +YA+CG
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 546 IQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSA 605
++A+ F+ ++D + WN +IS +A G + ALQ+ +M G++ N TF V+SA
Sbjct: 606 PEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSA 665
Query: 606 AANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKN-EVS 664
++ ++ G + ++++ G + ETE +++L + G ++ A+ +MP K +
Sbjct: 666 CSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 665 WNAMITGFSQHGYALEAINLFEKMKKHDVMPNHV---TFVGVLSACSHVGLVNEGLRYFE 721
W ++++G ++ G + L E + ++ + +F + + + G+ E + E
Sbjct: 726 WRSLLSGCAKAG----NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRE 781
Query: 722 SMSTEYGLVPKP 733
M E G+V +P
Sbjct: 782 RMKVE-GVVKEP 792
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/565 (27%), Positives = 272/565 (48%), Gaps = 27/565 (4%)
Query: 15 WLLEGCLSYGSLLE----AKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDD 70
++L LS S+L K+IH IL+ G + + L + + Y+ G + +A K+F+
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 71 MSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQ 130
M + + SW L+SG+ L + LF M + P+ +L +C + A+
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC--ASLHALG 367
Query: 131 CVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFS 190
Q+H I G ++N LID+YAK + A+KVF+ D V + AMI G+S
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 191 QNGYE---REAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSS 247
+ G + EA+ +F M P+ S L A + + +Q HGL+FK+G +
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 248 ETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQ 307
+ F +AL+ +YS L + +F +M+ +D V +NS+ +G Q +++AL LF ++Q
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 308 LDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVE 367
L +PD T A++V+A ++ + + G++ H +K G+ + + ++LD+Y KC E
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 368 TAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCT 427
A+K F + + +VV WN ++ +Y + ++ Q+ ++M +EG+ PN T+ +L C+
Sbjct: 608 DAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Query: 428 SLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEME 487
G + G L + +LR E + + M+ + G +A EL E+M
Sbjct: 668 HAGLVEDG---------LKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 488 NQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQ 547
+ I + S +S CA + + +S D S L ++YA G
Sbjct: 719 TKPAA---IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSF-TMLSNIYASKGMWT 774
Query: 548 EAYLVFNKIDAKDNI-----SWNGL 567
EA V ++ + + SW G+
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWIGI 799
Score = 209 bits (533), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 257/528 (48%), Gaps = 42/528 (7%)
Query: 319 ASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTET 378
A L+ AS +H I G+ D + +++LY + + A K F
Sbjct: 48 ARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE 107
Query: 379 ENVVLWNVMLVAYGQLNDLSESFQIFKQM-QTEGLTPNQYTYPTILRTCTSLGAL----- 432
N+V W+ M+ A ES +F + +T +PN+Y + ++ C+ L
Sbjct: 108 RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMV 167
Query: 433 -------------------SLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQH 473
+L + + GN++ A+ + LPE V+WT MI G V+
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 474 GMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIG 533
G +L+LF ++ + D S+ +SAC+ + L G+QIHA G D S+
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 534 NALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQ 593
N LI Y +CGR+ A+ +FN + K+ ISW L+SG+ Q+ + A+++F+ M++ G++
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 594 ANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKRE 653
++Y S++++ A+L + G QVHA IK +++ +NSLI +YAKC + DA++
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 654 FLEMPEKNEVSWNAMITGFSQHGYAL---EAINLFEKMKKHDVMPNHVTFVGVLSACSHV 710
F + V +NAMI G+S+ G EA+N+F M+ + P+ +TFV +L A +
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA-- 465
Query: 711 GLVNEGL-RYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWR 769
L + GL + + +YGL + ++D+ CL +R ++M ++ D ++W
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWN 524
Query: 770 TLLSACRVHKNMEIGEYAANHLLEL----EPEDSATYVLLSNIYAAAG 813
++ + + E A N LEL E D T+ +N+ AAG
Sbjct: 525 SMFAG---YVQQSENEEALNLFLELQLSRERPDEFTF---ANMVTAAG 566
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 222/496 (44%), Gaps = 53/496 (10%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M + G++ + +L C S +L ++H +K + + + ++Y
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGR-----VLGLFLQMIDDDVIPNEATFV 115
L A K+FD + V +N +I G+ +L + L +F M + P+ TFV
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGY--SRLGTQWELHEALNIFRDMRFRLIRPSLLTFV 458
Query: 116 GVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLC 175
+LRA ++ + QIHGL+ +G + LID+Y+ + ++ VF+ +
Sbjct: 459 SLLRASASLTSLGLS--KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 176 FKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQ 235
KD V W +M +G+ Q EA+ LF ++ + P + ++ ++A + ++G++
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 236 FHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGY 295
FH + K G ++ NAL+ +Y++ G+ A + F RD V +NS+IS A G
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 296 SDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGS 355
KAL++ EKM + ++P+ +T ++SAC+ G G + ++ GI
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE-------- 688
Query: 356 MLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPN 415
ETE+ V +L G+LN E + ++M T+ P
Sbjct: 689 --------------------PETEHYVCMVSLLGRAGRLNKARE---LIEKMPTK---PA 722
Query: 416 QYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGM 475
+ ++L C G + L E + A+ + P+D S+T + + GM
Sbjct: 723 AIVWRSLLSGCAKAGNVELAE---------HAAEMAILSDPKDS-GSFTMLSNIYASKGM 772
Query: 476 FGEALELFEEMENQGI 491
+ EA ++ E M+ +G+
Sbjct: 773 WTEAKKVRERMKVEGV 788
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/682 (36%), Positives = 387/682 (56%), Gaps = 30/682 (4%)
Query: 317 TVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTT 376
+ S++ C G G Q+H Y +K G ++I ++D+Y KC + AYK F +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 377 ETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGE 436
NVV W+ ++ + DL S +F +M +G+ PN++T+ T L+ C L AL G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 437 QIH----------------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHG 474
QIH ++ G +N A+++ RR+ + ++SW AMI GFV G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 475 MFGEALELFEEMENQGIQS--DNIGFSSAISACAGIQALNQGRQIHAQSYISGF--SDDL 530
+AL+ F M+ I+ D +S + AC+ + G+QIH SGF
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 531 SIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQV 590
+I +L+ LY +CG + A F++I K ISW+ LI G+AQ G A+ +F ++ ++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 591 GVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDA 650
Q + + S++ A+ A ++QGKQ+ A+ +K ET NS++ +Y KCG +D+A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 651 KREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHV 710
++ F EM K+ +SW +ITG+ +HG +++ +F +M +H++ P+ V ++ VLSACSH
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 711 GLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRT 770
G++ EG F + +G+ P+ EHYACVVDLLGRAG L A+ + MPI+P+ +W+T
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 771 LLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGV 830
LLS CRVH ++E+G+ LL ++ ++ A YV++SN+Y AG W+ + R++ +G+
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 831 KKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRV-AEIGYVQGRYSLWSDLE 889
KKE G SW+E++ +H F G+ HPL I + L RR+ E+GYV G D++
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDID 607
Query: 890 QEQKDPCVYIHSEKLAIAFGLLS---LSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTI 946
E K+ + HSEKLAI L + I V KNLRVC DCH +IK +SKI+
Sbjct: 608 DESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAY 667
Query: 947 VVRDANRFHHFEGGVCSCRDYW 968
VVRDA RFH FE G CSC DYW
Sbjct: 668 VVRDAVRFHSFEDGCCSCGDYW 689
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 230/441 (52%), Gaps = 6/441 (1%)
Query: 6 IQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAM 65
I Q V +L C G + ++H +LK G + + ++Y + A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 66 KIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSG 125
K+FD M +R V SW+ L+SG V L LF +M + PNE TF L+AC G
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC-GLL 120
Query: 126 NVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAM 185
N A++ QIHG + GF + N L+D+Y+K G I+ A+KVF + + +SW AM
Sbjct: 121 N-ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 186 ISGFSQNGYEREAILLFCQMHI--LGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKW 243
I+GF GY +A+ F M + P + ++S L AC+ + G+Q HG + +
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 244 GF--SSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALE 301
GF S + +LV LY + G L SA + F +++++ ++++SLI G AQ G +A+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 302 LFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYV 361
LF+++Q + D ++S++ A R G+Q+ + A+K+ + V S++D+Y+
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 362 KCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPT 421
KC V+ A K F + ++V+ W V++ YG+ +S +IF +M + P++ Y
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 422 ILRTCTSLGALSLGEQIHTQL 442
+L C+ G + GE++ ++L
Sbjct: 420 VLSACSHSGMIKEGEELFSKL 440
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 205/394 (52%), Gaps = 8/394 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M +GI N TF L+ C +L + +IHG LK+GF+ + + ++Y G
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVI--PNEATFVGVL 118
++ A K+F + R++ SWN +I+GFV + L F M + ++ P+E T +L
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 119 RACIGSGNVAVQCVNQIHGLIISHGF--GGSPLISNPLIDLYAKNGFIDSAKKVFNNLCF 176
+AC +G + QIHG ++ GF S I+ L+DLY K G++ SA+K F+ +
Sbjct: 218 KACSSTGMIYAG--KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 177 KDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQF 236
K +SW ++I G++Q G EA+ LF ++ L + +A+SS + L G+Q
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 237 HGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYS 296
L K ET V N++V +Y + G + AE+ F++MQ +D +++ +I+G + G
Sbjct: 336 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 395
Query: 297 DKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKV-GISKDIIVEGS 355
K++ +F +M ++PD V +++SAC+ G + GE+L S ++ GI +
Sbjct: 396 KKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 356 MLDLYVKCSDVETAYKFFLTTETE-NVVLWNVML 388
++DL + ++ A T + NV +W +L
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/804 (32%), Positives = 434/804 (53%), Gaps = 26/804 (3%)
Query: 186 ISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGF 245
+ G NG EA+ L M L + + C E G + + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 246 SSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEK 305
S + NA + ++ R GNL A +F KM +R+ ++N L+ G A+ GY D+A+ L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 306 M-QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCS 364
M + +KPD T ++ C + G+++H + ++ G DI V +++ +YVKC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 365 DVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILR 424
DV++A F +++ WN M+ Y + E ++F M+ + P+ T +++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 425 TCTSLGALSLGEQIH------------------TQL----GNLNTAQEILRRLPEDDVVS 462
C LG LG IH TQ+ G+ A+++ R+ D+VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 463 WTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSY 522
WT MI G+ + + +A++ + M+ ++ D I ++ +SACA + L+ G ++H +
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 523 ISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQ 582
+ + + N LI++Y++C I +A +F+ I K+ ISW +I+G + C AL
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Query: 583 VFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYA 642
QM ++ +Q N T + ++A A + + GK++HA +++TG + N+L+ +Y
Sbjct: 486 FLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 643 KCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVG 702
+CG ++ A +F +K+ SWN ++TG+S+ G + LF++M K V P+ +TF+
Sbjct: 545 RCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFIS 603
Query: 703 VLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIE 762
+L CS +V +GL YF M +YG+ P +HYACVVDLLGRAG L A +F ++MP+
Sbjct: 604 LLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 763 PDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIR 822
PD VW LL+ACR+H +++GE +A H+ EL+ + Y+LL N+YA GKW ++R
Sbjct: 663 PDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVR 722
Query: 823 QIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRY 882
++MK+ G+ + G SW+EVK +HAF D+ HP +I L +++E+G +
Sbjct: 723 RMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISE 782
Query: 883 SLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKIS 942
S D + +D HSE+ AIAFGL++ MPI V KNL +C +CH+ +KF+SK
Sbjct: 783 SSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTV 842
Query: 943 NRTIVVRDANRFHHFEGGVCSCRD 966
R I VRDA FHHF+ G CSC D
Sbjct: 843 RREISVRDAEHFHHFKDGECSCGD 866
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/598 (28%), Positives = 293/598 (48%), Gaps = 36/598 (6%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILK----LGFDGEQVLCDKFFNIYL 56
M+E + + FV L+ C + E K++ L LG + L + F +++
Sbjct: 85 MQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVE----LGNAFLAMFV 140
Query: 57 TSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMI-DDDVIPNEATFV 115
G+L A +F MS+R +FSWN L+ G+ + + L+ +M+ V P+ TF
Sbjct: 141 RFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFP 200
Query: 116 GVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLC 175
VLR C G ++A ++H ++ +G+ + N LI +Y K G + SA+ +F+ +
Sbjct: 201 CVLRTCGGIPDLARG--KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 176 FKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQ 235
+D +SW AMISG+ +NG E + LF M L P ++S +SAC + +G
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 236 FHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGY 295
H + GF+ + VCN+L +Y +G+ AE++FS+M+++D V++ ++ISG
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 296 SDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGS 355
DKA++ + M D +KPD +TVA+++SACA++G TG +LH AIK + +IV +
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 356 MLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPN 415
++++Y KC ++ A F +NV+ W ++ N E+ +QM+ L PN
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPN 497
Query: 416 QYTYPTILRTCTSLGALSLGEQIHTQL----------------------GNLNTAQEILR 453
T L C +GAL G++IH + G +NTA
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557
Query: 454 RLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQ 513
+ DV SW ++ G+ + G +ELF+ M ++ D I F S + C+ Q + Q
Sbjct: 558 S-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQ 616
Query: 514 GRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKID-AKDNISWNGLISG 570
G ++ G + +L ++ L R G +QEA+ K+ D W L++
Sbjct: 617 GLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 281/794 (35%), Positives = 417/794 (52%), Gaps = 35/794 (4%)
Query: 207 ILGTVPTPYAISSA--LSACTKIELFEIGE------QFHGLIFKWGFSSETFVCNALVTL 258
+L TV + A ++A +S T ++ F+ Q H I GF ++ + L
Sbjct: 2 LLRTVSSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQR 61
Query: 259 YSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDC-LKPDCVT 317
S G + A IF +Q+ D +N L+ G + +L +F ++ LKP+ T
Sbjct: 62 LSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSST 121
Query: 318 VASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTE 377
A +SA + R G +H A+ G ++++ +++ +Y K VE A K F
Sbjct: 122 YAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 378 TENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTP-NQYTYPTILRTCTSLGALSLGE 436
++ +LWN M+ Y + ES Q+F+ + E T + T IL L L LG
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGM 241
Query: 437 QIHT----------------------QLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHG 474
QIH+ + G + + R + D+V++ AMI G+ +G
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
Query: 475 MFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGN 534
+L LF+E+ G + + S + + + IH S F S+
Sbjct: 302 ETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVST 358
Query: 535 ALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQA 594
AL ++Y++ I+ A +F++ K SWN +ISG+ Q+G E A+ +F +M +
Sbjct: 359 ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSP 418
Query: 595 NLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREF 654
N T ++SA A L + GK VH ++ T ++S S +LI +YAKCGSI +A+R F
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 655 LEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVN 714
M +KNEV+WN MI+G+ HG EA+N+F +M + P VTF+ VL ACSH GLV
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538
Query: 715 EGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSA 774
EG F SM YG P +HYAC+VD+LGRAG L RA +F E M IEP + VW TLL A
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
Query: 775 CRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEP 834
CR+HK+ + + L EL+P++ +VLLSNI++A + +RQ K R + K P
Sbjct: 599 CRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAP 658
Query: 835 GQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKD 894
G + IE+ + H F GD+ HP +IY+ L L ++ E GY D+E+E+++
Sbjct: 659 GYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERE 718
Query: 895 PCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRF 954
V +HSE+LAIAFGL++ I +IKNLRVC DCH K +SKI+ R IVVRDANRF
Sbjct: 719 LMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRF 778
Query: 955 HHFEGGVCSCRDYW 968
HHF+ GVCSC DYW
Sbjct: 779 HHFKDGVCSCGDYW 792
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 280/605 (46%), Gaps = 29/605 (4%)
Query: 126 NVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAM 185
+ ++ + Q H II HGF + L + G I A+ +F ++ D + +
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 186 ISGFSQNGYEREAILLFCQMHILGTV-PTPYAISSALSACTKIELFEIGEQFHGLIFKWG 244
+ GFS N ++ +F + + P + A+SA + G HG G
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149
Query: 245 FSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFE 304
SE + + +V +Y + + A ++F +M ++D + +N++ISG + +++++F
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR 209
Query: 305 KM-QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVG-ISKDIIVEGSMLDLYVK 362
+ C + D T+ ++ A A + R G Q+HS A K G S D ++ G + LY K
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISLYSK 268
Query: 363 CSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTI 422
C ++ F ++V +N M+ Y + S +FK++ G T ++
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 423 LRT-------------CTSLGALSLGE------QIHTQLGNLNTAQEILRRLPEDDVVSW 463
+ C LS ++++L + +A+++ PE + SW
Sbjct: 329 VPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSW 388
Query: 464 TAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYI 523
AMI G+ Q+G+ +A+ LF EM+ + + + +SACA + AL+ G+ +H
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRS 448
Query: 524 SGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQV 583
+ F + + ALI +YA+CG I EA +F+ + K+ ++WN +ISG+ G + AL +
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNI 508
Query: 584 FSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQV-HAMIIKTGYDSETEASNSLITLYA 642
F +M G+ TF V+ A ++ +K+G ++ ++MI + G++ + ++ +
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Query: 643 KCGSIDDAKREFLEMP--EKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTF 700
+ G + A +F+E E W ++ H A + EK+ + D P++V +
Sbjct: 569 RAGHLQRA-LQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD--PDNVGY 625
Query: 701 VGVLS 705
+LS
Sbjct: 626 HVLLS 630
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 228/519 (43%), Gaps = 29/519 (5%)
Query: 6 IQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAM 65
++ NS T+ + + + + IHG+ + G D E +L +Y ++ A
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDAR 174
Query: 66 KIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIP-NEATFVGVLRACIGS 124
K+FD M ++ WN +ISG+ ++ + +F +I++ + T + +L A
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 125 GNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVA 184
+ + QIH L G + I LY+K G I +F D V++ A
Sbjct: 235 QELRLGM--QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 185 MISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQF------HG 238
MI G++ NG ++ LF ++ + G + L + T + L + HG
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSG---------ARLRSSTLVSLVPVSGHLMLIYAIHG 343
Query: 239 LIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDK 298
K F S V AL T+YS+ + SA ++F + ++ ++N++ISG Q G ++
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 299 ALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLD 358
A+ LF +MQ P+ VT+ ++SACA +GA G+ +H I V +++
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 359 LYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYT 418
+Y KC + A + F +N V WN M+ YG E+ IF +M G+TP T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 419 YPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGE 478
+ +L C+ G + G++I + I R E V + M+ + G
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSM--------IHRYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 479 ALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQI 517
AL+ E M I+ + + + + AC + N R +
Sbjct: 576 ALQFIEAM---SIEPGSSVWETLLGACRIHKDTNLARTV 611
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 185/392 (47%), Gaps = 7/392 (1%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
+ E + ++ T + +L L +IH K G + F ++Y G
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
+ +F + K + ++N +I G+ + + L LF +++ +T V ++
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
SG++ + + IHG + F +S L +Y+K I+SA+K+F+ K
Sbjct: 332 ---SGHLML--IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLP 386
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
SW AMISG++QNG +AI LF +M P P I+ LSAC ++ +G+ H L+
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
F S +V AL+ +Y++ G++ A ++F M +++ VT+N++ISG G +AL
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEAL 506
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAI-KVGISKDIIVEGSMLDL 359
+F +M + P VT ++ AC+ G + G+++ + I + G + M+D+
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566
Query: 360 YVKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
+ ++ A +F E +W +L A
Sbjct: 567 LGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/769 (32%), Positives = 403/769 (52%), Gaps = 79/769 (10%)
Query: 235 QFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCG 294
Q H I K G ++ ++ L+ YS A+ + + +++SLI L +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 295 YSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEG 354
+++ +F +M L PD + +L CA + AF+ G+Q+H + G+ D V+G
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 355 SMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTP 414
SM +Y++C + A K F ++VV + +L AY + L E +I +M++ G+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI-- 213
Query: 415 NQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHG 474
E ++VSW ++ GF + G
Sbjct: 214 ------------------------------------------EANIVSWNGILSGFNRSG 231
Query: 475 MFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGN 534
EA+ +F+++ + G D + SS + + + LN GR IH G D + +
Sbjct: 232 YHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVIS 291
Query: 535 ALISLYARCGRIQEAYLVFNKIDAKDN--------------------------------- 561
A+I +Y + G + +FN+ + +
Sbjct: 292 AMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMEL 351
Query: 562 --ISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVH 619
+SW +I+G AQ+G AL++F +M GV+ N T S++ A N+A + G+ H
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 620 AMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYAL 679
++ ++LI +YAKCG I+ ++ F MP KN V WN+++ GFS HG A
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAK 471
Query: 680 EAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACV 739
E +++FE + + + P+ ++F +LSAC VGL +EG +YF+ MS EYG+ P+ EHY+C+
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCM 531
Query: 740 VDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDS 799
V+LLGRAG L A + ++MP EPD+ VW LL++CR+ N+++ E AA L LEPE+
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENP 591
Query: 800 ATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLAD 859
TYVLLSNIYAA G W D IR M+ G+KK PG SWI+VKN ++ GD+ HP D
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQID 651
Query: 860 KIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPI 919
+I + + +++ + + G+ D+E+++++ ++ HSEKLA+ FGLL+ D P+
Sbjct: 652 QITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPL 711
Query: 920 LVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
VIKNLR+C DCH IKF+S + R I +RD NRFHHF+ G+CSC D+W
Sbjct: 712 QVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 176 bits (446), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 227/534 (42%), Gaps = 96/534 (17%)
Query: 28 EAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFV 87
+ + H +ILK G + + K Y + A + + T++S++ LI
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 88 AKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGS 147
KL + +G+F +M +IP+ + + C + A + QIH + G
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC--AELSAFKVGKQIHCVSCVSGLDMD 150
Query: 148 PLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS---------------------------- 179
+ + +Y + G + A+KVF+ + KD
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 180 -------VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEI 232
VSW ++SGF+++GY +EA+++F ++H LG P +SS L + E+ +
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 233 GEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ--------------QR 278
G HG + K G + V +A++ +Y +SG++ +F++ + R
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 279 DG---------------------VTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVT 317
+G V++ S+I+G AQ G +ALELF +MQ+ +KP+ VT
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 318 VASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTE 377
+ S++ AC ++ A G H +A++V + ++ V +++D+Y KC + + F
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 378 TENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQ 437
T+N+V WN ++ + E IF+ + L P+ ++ ++L C +G G +
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 438 IHTQL-----------------------GNLNTAQEILRRLP-EDDVVSWTAMI 467
+ G L A ++++ +P E D W A++
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/532 (22%), Positives = 219/532 (41%), Gaps = 94/532 (17%)
Query: 132 VNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQ 191
Q H I+ G IS LI Y+ + A V ++ S+ ++I ++
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 192 NGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFV 251
++I +F +M G +P + + + C ++ F++G+Q H + G + FV
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 252 CNALVTLYSRSGNLTSAEQIFSKMQQRDGVT----------------------------- 282
++ +Y R G + A ++F +M +D VT
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 283 ------YNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQ 336
+N ++SG + GY +A+ +F+K+ PD VTV+S++ + G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 337 LHSYAIKVGISKDIIVEGSMLDLYVKCSD------------------------------- 365
+H Y IK G+ KD V +M+D+Y K
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 366 VETAYKFFLTTETE----NVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPT 421
V+ A + F + + NVV W ++ Q E+ ++F++MQ G+ PN T P+
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 422 ILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDD 459
+L C ++ AL G H + G +N +Q + +P +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 460 VVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQG-RQIH 518
+V W +++ GF HG E + +FE + ++ D I F+S +SAC + ++G +
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 519 AQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKID-AKDNISWNGLIS 569
S G L + +++L R G++QEAY + ++ D+ W L++
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 130/585 (22%), Positives = 226/585 (38%), Gaps = 127/585 (21%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M G+ +S L + C + K+IH G D + + F++Y+ G
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 61 LDSAMKIFDDMSKRTV-----------------------------------FSWNKLISG 85
+ A K+FD MS + V SWN ++SG
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 86 FVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFG 145
F + +F ++ P++ T VL + +G + + IHG +I G
Sbjct: 227 FNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPS-VGDSEM-LNMGRLIHGYVIKQGLL 284
Query: 146 GSPLISNPLIDLYAK-------------------------------NGFIDSAKKVFNNL 174
+ + +ID+Y K NG +D A ++F
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE-- 342
Query: 175 CFKDS------VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIE 228
FK+ VSW ++I+G +QNG + EA+ LF +M + G P I S L AC I
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 229 LFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLIS 288
G HG + V +AL+ +Y++ G + ++ +F+ M ++ V +NSL++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 289 GLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISK 348
G + G + + + +FE + LKPD ++ SL+SAC VG G +
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK------------ 510
Query: 349 DIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQ 408
Y K E K L ++ M+ G+ L E++ + K+M
Sbjct: 511 -----------YFKMMSEEYGIKPRLEH-------YSCMVNLLGRAGKLQEAYDLIKEMP 552
Query: 409 TEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIV 468
E P+ + +L +C + L E A E L L ++ ++ +
Sbjct: 553 FE---PDSCVWGALLNSCRLQNNVDLAE----------IAAEKLFHLEPENPGTYVLLSN 599
Query: 469 GFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQ 513
+ GM+ E + +ME+ G++ + C+ IQ N+
Sbjct: 600 IYAAKGMWTEVDSIRNKMESLGLKKN--------PGCSWIQVKNR 636
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 120/284 (42%), Gaps = 10/284 (3%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M+ G++ N T +L C + +L + HG +++ + ++Y G
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
++ + +F+ M + + WN L++GF + V+ +F ++ + P+ +F +L A
Sbjct: 439 INLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISN--PLIDLYAKNGFIDSAKKVFNNLCFK- 177
C G V + + ++S +G P + + +++L + G + A + + F+
Sbjct: 499 C---GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEP 555
Query: 178 DSVSWVAMISGFS-QNGYEREAILLFCQMHILGTVPTPYAISSALSACTKI--ELFEIGE 234
DS W A+++ QN + I H+ P Y + S + A + E+ I
Sbjct: 556 DSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRN 615
Query: 235 QFHGLIFKWGFS-SETFVCNALVTLYSRSGNLTSAEQIFSKMQQ 277
+ L K S V N + TL + + +QI KM +
Sbjct: 616 KMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDE 659
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/624 (38%), Positives = 374/624 (59%), Gaps = 31/624 (4%)
Query: 376 TETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLG 435
+ +V WN ++ + D +E+ F M+ L P + ++P ++ C+SL + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 436 EQIHTQL----------------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQH 473
+Q H Q G L A+++ +P+ ++VSWT+MI G+ +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 474 GMFGEALELFEEM------ENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFS 527
G +A+ LF+++ ++ + D++G S ISAC+ + A IH+ GF
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 528 DDLSIGNALISLYARCGR--IQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFS 585
+S+GN L+ YA+ G + A +F++I KD +S+N ++S +AQSG A +VF
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 586 QMTQVGVQA-NLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKC 644
++ + V N T +V+ A ++ ++ GK +H +I+ G + + S+I +Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 645 GSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVL 704
G ++ A++ F M KN SW AMI G+ HG+A +A+ LF M V PN++TFV VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 705 SACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPD 764
+ACSH GL EG R+F +M +G+ P EHY C+VDLLGRAG L +A + ++M ++PD
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 765 AMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQI 824
+++W +LL+ACR+HKN+E+ E + L EL+ + Y+LLS+IYA AG+W +++R I
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 825 MKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSL 884
MK+RG+ K PG S +E+ +H F +GD HP +KIY++L LNR++ E GYV S+
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575
Query: 885 WSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNR 944
D+++E+K+ + +HSEKLAIAFG+++ + V+KNLRVC+DCHN IK +SKI +R
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDR 635
Query: 945 TIVVRDANRFHHFEGGVCSCRDYW 968
VVRDA RFHHF+ G CSC DYW
Sbjct: 636 EFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 219/444 (49%), Gaps = 22/444 (4%)
Query: 71 MSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQ 130
+ K VFSWN +I+ S L F M + P ++F ++AC S +
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC--SSLFDIF 93
Query: 131 CVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFS 190
Q H G+ +S+ LI +Y+ G ++ A+KVF+ + ++ VSW +MI G+
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 191 QNGYEREAILLFCQMHIL------GTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWG 244
NG +A+ LF + + + S +SAC+++ + E H + K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 245 FSSETFVCNALVTLYSRSGN--LTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALEL 302
F V N L+ Y++ G + A +IF ++ +D V+YNS++S AQ G S++A E+
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 303 FEKM-QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYV 361
F ++ + + + +T+++++ A + GA R G+ +H I++G+ D+IV S++D+Y
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 362 KCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPT 421
KC VETA K F + +NV W M+ YG +++ ++F M G+ PN T+ +
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 422 ILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALE 481
+L C+ G G + + R E + + M+ + G +A +
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKG--------RFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 482 LFEEMENQGIQSDNIGFSSAISAC 505
L + M+ ++ D+I +SS ++AC
Sbjct: 446 LIQRMK---MKPDSIIWSSLLAAC 466
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 197/402 (49%), Gaps = 15/402 (3%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M + + +F ++ C S + K+ H + G+ + + +Y T G
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATF------ 114
L+ A K+FD++ KR + SW +I G+ + + LF ++ D+ ++A F
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 115 VGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAK--NGFIDSAKKVFN 172
V V+ AC S A IH +I GF + N L+D YAK G + A+K+F+
Sbjct: 187 VSVISAC--SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 173 NLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAI--SSALSACTKIELF 230
+ KD VS+ +++S ++Q+G EA +F ++ + V T AI S+ L A +
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL-VKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 231 EIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGL 290
IG+ H + + G + V +++ +Y + G + +A + F +M+ ++ ++ ++I+G
Sbjct: 304 RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 291 AQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQ-LHSYAIKVGISKD 349
G++ KALELF M ++P+ +T S+++AC+ G G + ++ + G+
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 350 IIVEGSMLDLYVKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
+ G M+DL + ++ AY + + + ++W+ +L A
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 185/375 (49%), Gaps = 26/375 (6%)
Query: 434 LGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQS 493
L + HT+ NL T R + + DV SW ++I + G EAL F M +
Sbjct: 17 LHTERHTERQNLTTLFN--RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYP 74
Query: 494 DNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVF 553
F AI AC+ + + G+Q H Q+++ G+ D+ + +ALI +Y+ CG++++A VF
Sbjct: 75 TRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVF 134
Query: 554 NKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQAN-------LYTFG--SVVS 604
++I ++ +SW +I G+ +G A+ +F + V N L + G SV+S
Sbjct: 135 DEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL---VDENDDDDAMFLDSMGLVSVIS 191
Query: 605 AAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGS--IDDAKREFLEMPEKNE 662
A + + + +H+ +IK G+D N+L+ YAK G + A++ F ++ +K+
Sbjct: 192 ACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR 251
Query: 663 VSWNAMITGFSQHGYALEAINLFEKMKKHDVMP-NHVTFVGVLSACSHVGLVNEGLRYFE 721
VS+N++++ ++Q G + EA +F ++ K+ V+ N +T VL A SH G + G +
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIH 310
Query: 722 SMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNM 781
GL ++D+ + G + AR+ ++M + W +++ +H +
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGH- 368
Query: 782 EIGEYAANHLLELEP 796
A LEL P
Sbjct: 369 ------AAKALELFP 377
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/752 (34%), Positives = 409/752 (54%), Gaps = 44/752 (5%)
Query: 217 ISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ 276
I + + T+I+ +Q H + S T + ++++Y+ L A +F ++
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLK 66
Query: 277 QRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQ 336
+ + S+I KAL F +M+ PD S++ +C + R GE
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 337 LHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLND 396
+H + +++G+ D+ +++++Y K L+ G
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAK-------------------------LLGMGSKIS 161
Query: 397 LSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLP 456
+ F Q T N TC + G +++ + + +P
Sbjct: 162 VGNVFDEMPQR-----TSNSGDEDVKAETCI----MPFG---------IDSVRRVFEVMP 203
Query: 457 EDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ 516
DVVS+ +I G+ Q GM+ +AL + EM ++ D+ SS + + + +G++
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 517 IHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGY 576
IH G D+ IG++L+ +YA+ RI+++ VF+++ +D ISWN L++G+ Q+G
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 577 CEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNS 636
AL++F QM V+ F SV+ A A+LA + GKQ+H +++ G+ S +++
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 637 LITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPN 696
L+ +Y+KCG+I A++ F M +EVSW A+I G + HG+ EA++LFE+MK+ V PN
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 697 HVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFT 756
V FV VL+ACSHVGLV+E YF SM+ YGL + EHYA V DLLGRAG L A F
Sbjct: 444 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFI 503
Query: 757 EQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWD 816
+M +EP VW TLLS+C VHKN+E+ E A + ++ E+ YVL+ N+YA+ G+W
Sbjct: 504 SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWK 563
Query: 817 CRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIG 876
++R M+ +G++K+P SWIE+KN H F GDR HP DKI ++L + ++ + G
Sbjct: 564 EMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEG 623
Query: 877 YVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIK 936
YV + D+++E K ++ HSE+LA+AFG+++ I V KN+R+C DCH IK
Sbjct: 624 YVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIK 683
Query: 937 FVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
F+SKI+ R I+VRD +RFHHF G CSC DYW
Sbjct: 684 FISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/604 (23%), Positives = 272/604 (45%), Gaps = 69/604 (11%)
Query: 154 LIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPT 213
+I +Y + A +F L ++W ++I F+ +A+ F +M G P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 214 PYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSR------------ 261
S L +CT + GE HG I + G + + NAL+ +Y++
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 262 -----------SGN-------------LTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSD 297
SG+ + S ++F M ++D V+YN++I+G AQ G +
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 298 KALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSML 357
AL + +M LKPD T++S++ + G+++H Y I+ GI D+ + S++
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 358 DLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQY 417
D+Y K + +E + + F + + WN ++ Y Q +E+ ++F+QM T + P
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 418 TYPTILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRL 455
+ +++ C L L LG+Q+H ++ GN+ A++I R+
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 456 PEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQG- 514
D VSWTA+I+G HG EA+ LFEEM+ QG++ + + F + ++AC+ + +++
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 515 RQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNIS-WNGLISGFAQ 573
++ + + G + +L A+ L R G+++EAY +K+ + S W+ L+S +
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 574 SGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEA 633
E A +V ++ V + N+ + + + A+ K+ ++ + K G +
Sbjct: 525 HKNLELAEKVAEKIFTVDSE-NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL--RKKP 581
Query: 634 SNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDV 693
+ S I + K R M + NE A++ + GY + + HDV
Sbjct: 582 ACSWIEMKNKTHGFVSGDRSHPSMDKINEF-LKAVMEQMEKEGYVADTSGVL-----HDV 635
Query: 694 MPNH 697
H
Sbjct: 636 DEEH 639
Score = 193 bits (490), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/560 (23%), Positives = 266/560 (47%), Gaps = 57/560 (10%)
Query: 28 EAKKIHGKILK---LGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLIS 84
+AK++H + ++ L ++ +IY L A+ +F + V +W +I
Sbjct: 23 QAKQLHAQFIRTQSLSHTSASIV----ISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 78
Query: 85 GFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGF 144
F + L + L F++M P+ F VL++C + + ++ +HG I+ G
Sbjct: 79 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSC--TMMMDLRFGESVHGFIVRLGM 136
Query: 145 GGSPLISNPLIDLYAK-----------NGF-------------------------IDSAK 168
N L+++YAK N F IDS +
Sbjct: 137 DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR 196
Query: 169 KVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIE 228
+VF + KD VS+ +I+G++Q+G +A+ + +M P + +SS L ++
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 229 LFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLIS 288
G++ HG + + G S+ ++ ++LV +Y++S + +E++FS++ RDG+++NSL++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 289 GLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISK 348
G Q G ++AL LF +M +KP V +S++ ACA + G+QLH Y ++ G
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 349 DIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQ 408
+I + +++D+Y KC +++ A K F + V W +++ + E+ +F++M+
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 409 TEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIV 468
+G+ PNQ + +L C+ +G + G N+ ++ E + + A ++
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGL------VDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 469 GFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSD 528
G + G EA +M ++ +S+ +S+C+ + L ++ A+ + S+
Sbjct: 491 G--RAGKLEEAYNFISKM---CVEPTGSVWSTLLSSCSVHKNLELAEKV-AEKIFTVDSE 544
Query: 529 DLSIGNALISLYARCGRIQE 548
++ + ++YA GR +E
Sbjct: 545 NMGAYVLMCNMYASNGRWKE 564
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/587 (25%), Positives = 266/587 (45%), Gaps = 72/587 (12%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYL---- 56
M G + F +L+ C L + +HG I++LG D + + N+Y
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155
Query: 57 -------------------TSGD-------------LDSAMKIFDDMSKRTVFSWNKLIS 84
SGD +DS ++F+ M ++ V S+N +I+
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIA 215
Query: 85 GFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGF 144
G+ + L + +M D+ P+ T VL I S V V +IHG +I G
Sbjct: 216 GYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP--IFSEYVDVIKGKEIHGYVIRKGI 273
Query: 145 GGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQ 204
I + L+D+YAK+ I+ +++VF+ L +D +SW ++++G+ QNG EA+ LF Q
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ 333
Query: 205 MHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGN 264
M P A SS + AC + +G+Q HG + + GF S F+ +ALV +YS+ GN
Sbjct: 334 MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 393
Query: 265 LTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSA 324
+ +A +IF +M D V++ ++I G A G+ +A+ LFE+M+ +KP+ V ++++A
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
Query: 325 CASVGAFRTGEQLHSYAIKV-GISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENV-V 382
C+ VG + KV G+++++ ++ DL + +E AY F E
Sbjct: 454 CSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGS 513
Query: 383 LWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL 442
+W+ +L + +L + ++ +++ T + N Y + S G ++
Sbjct: 514 VWSTLLSSCSVHKNLELAEKVAEKIFTVD-SENMGAYVLMCNMYASNGRWKEMAKL---- 568
Query: 443 GNLNTAQEILRRLPEDDVVSWTAM---IVGFVQHGMFGEALE--------LFEEMENQGI 491
L ++ LR+ P SW M GFV +++ + E+ME +G
Sbjct: 569 -RLRMRKKGLRKKP---ACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGY 624
Query: 492 QSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALIS 538
+D G L+ + H + + G S+ L++ +I+
Sbjct: 625 VADTSG------------VLHDVDEEHKRELLFGHSERLAVAFGIIN 659
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/828 (32%), Positives = 438/828 (52%), Gaps = 41/828 (4%)
Query: 105 DDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFI 164
++ IP + + L+AC + N+ Q Q+H +I + G ++ +YA G
Sbjct: 31 EETIPRRLSLL--LQAC-SNPNLLRQG-KQVHAFLIVNSISGDSYTDERILGMYAMCGSF 86
Query: 165 DSAKKVFNNLCFKDSV--SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALS 222
K+F L + S W ++IS F +NG +A+ + +M G P +
Sbjct: 87 SDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVK 146
Query: 223 ACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVT 282
AC ++ F+ + + G FV ++L+ Y G + ++F ++ Q+D V
Sbjct: 147 ACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVI 206
Query: 283 YNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAI 342
+N +++G A+CG D ++ F M++D + P+ VT ++S CAS G QLH +
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 343 KVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQ 402
G+ + ++ S+L +Y KC + A K F + V WN M+ Y Q + ES
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 403 IFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHT---------------------- 440
F +M + G+ P+ T+ ++L + + L +QIH
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 441 QLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSS 500
+ ++ AQ I + DVV +TAMI G++ +G++ ++LE+F + I + I S
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 501 AISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKD 560
+ + AL GR++H GF + +IG A+I +YA+CGR+ AY +F ++ +D
Sbjct: 447 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 561 NISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHA 620
+SWN +I+ AQS A+ +F QM G+ + + + +SA ANL + GK +H
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 621 MIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALE 680
+IK S+ + ++LI +YAKCG++ A F M EKN VSWN++I HG +
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 681 AINLFEKM-KKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACV 739
++ LF +M +K + P+ +TF+ ++S+C HVG V+EG+R+F SM+ +YG+ P+ EHYACV
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 740 VDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDS 799
VDL GRAG L+ A E + MP PDA VW TLL ACR+HKN+E+ E A++ L++L+P +S
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746
Query: 800 ATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLAD 859
YVL+SN +A A +W+ ++R +MK+R V+K PG SWIE+ H F GD HP +
Sbjct: 747 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESS 806
Query: 860 KIYDYLGNLNRRVAEIGYV------------QGRYSLWSDLEQEQKDP 895
IY L +L + GY+ + Y + +E+E +DP
Sbjct: 807 HIYSLLNSLLGELRLEGYIPQPYLPLHPESSRKVYPVSRFIEKEMRDP 854
Score = 290 bits (742), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/687 (26%), Positives = 329/687 (47%), Gaps = 29/687 (4%)
Query: 16 LLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFD--DMSK 73
LL+ C + L + K++H ++ G+ ++ +Y G K+F D+ +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 74 RTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVN 133
++ WN +IS FV L + L + +M+ V P+ +TF +++AC+ N + ++
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN--FKGID 158
Query: 134 QIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNG 193
+ + S G + +++ LI Y + G ID K+F+ + KD V W M++G+++ G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 194 YEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCN 253
I F M + P LS C L ++G Q HGL+ G E + N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 254 ALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKP 313
+L+++YS+ G A ++F M + D VT+N +ISG Q G +++L F +M + P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 314 DCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFF 373
D +T +SL+ + + +Q+H Y ++ IS DI + +++D Y KC V A F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 374 LTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALS 433
+ +VV++ M+ Y +S ++F+ + ++PN+ T +IL L AL
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 434 LGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFV 471
LG ++H + G +N A EI RL + D+VSW +MI
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 472 QHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLS 531
Q A+++F +M GI D + S+A+SACA + + + G+ IH + D+
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 532 IGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQ-V 590
+ LI +YA+CG ++ A VF + K+ +SWN +I+ G + +L +F +M +
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Query: 591 GVQANLYTFGSVVSAAANLANIKQG-KQVHAMIIKTGYDSETEASNSLITLYAKCGSIDD 649
G++ + TF ++S+ ++ ++ +G + +M G + E ++ L+ + G + +
Sbjct: 639 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 698
Query: 650 AKREFLEMPEKNEVS-WNAMITGFSQH 675
A MP + W ++ H
Sbjct: 699 AYETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/570 (27%), Positives = 267/570 (46%), Gaps = 26/570 (4%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSA 64
G+ + TF L++ C++ + + + LG D + + YL G +D
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 65 MKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGS 124
K+FD + ++ WN +++G+ V+ F M D + PN TF VL C +
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC--A 250
Query: 125 GNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVA 184
+ + Q+HGL++ G I N L+ +Y+K G D A K+F + D+V+W
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 185 MISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWG 244
MISG+ Q+G E++ F +M G +P SS L + +K E E +Q H I +
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 245 FSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFE 304
S + F+ +AL+ Y + ++ A+ IFS+ D V + ++ISG G +LE+F
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 305 KMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCS 364
+ + P+ +T+ S++ + A + G +LH + IK G + +++D+Y KC
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490
Query: 365 DVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILR 424
+ AY+ F ++V WN M+ Q ++ S + IF+QM G+ + + L
Sbjct: 491 RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 550
Query: 425 TCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVS 462
C +L + S G+ IH + GNL A + + + E ++VS
Sbjct: 551 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 463 WTAMIVGFVQHGMFGEALELFEEM-ENQGIQSDNIGFSSAISACAGIQALNQG-RQIHAQ 520
W ++I HG ++L LF EM E GI+ D I F IS+C + +++G R +
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 521 SYISGFSDDLSIGNALISLYARCGRIQEAY 550
+ G ++ L+ R GR+ EAY
Sbjct: 671 TEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 210/456 (46%), Gaps = 48/456 (10%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M G+ ++ TF LL + +L K+IH I++ + L + Y
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
+ A IF + V + +ISG++ L L +F ++ + PNE T V +L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL-P 449
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
IG +A++ ++HG II GF I +ID+YAK G ++ A ++F L +D V
Sbjct: 450 VIGIL-LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 508
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
SW +MI+ +Q+ AI +F QM + G +IS+ALSAC + G+ HG +
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
K +S+ + + L+ +Y++ GNL +A +F M++++ V++NS+I+ G +L
Sbjct: 569 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSL 628
Query: 301 ELFEKM-QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDL 359
LF +M + ++PD +T ++S+C VG
Sbjct: 629 CLFHEMVEKSGIRPDQITFLEIISSCCHVG------------------------------ 658
Query: 360 YVKCSDVETAYKFFLTTETENVVL------WNVMLVAYGQLNDLSESFQIFKQMQTEGLT 413
DV+ +FF + TE+ + + ++ +G+ L+E+++ K M
Sbjct: 659 -----DVDEGVRFF-RSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP---FP 709
Query: 414 PNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQ 449
P+ + T+L C + L E ++L +L+ +
Sbjct: 710 PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSN 745
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/707 (35%), Positives = 388/707 (54%), Gaps = 61/707 (8%)
Query: 320 SLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVE---TAYKFFLTT 376
SL+ C ++ + R +H+ IK+G+ +++ + E A F T
Sbjct: 38 SLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 377 ETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGE 436
+ N+++WN M + +D + +++ M + GL PN YT+P +L++C A G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 437 QIHTQL-----------------------------------------------------G 443
QIH + G
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 444 NLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAIS 503
+ AQ++ +P DVVSW AMI G+ + G + EALELF++M ++ D + +S
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 504 ACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNIS 563
ACA ++ GRQ+H GF +L I NALI LY++CG ++ A +F ++ KD IS
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 564 WNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMII 623
WN LI G+ + AL +F +M + G N T S++ A A+L I G+ +H I
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 624 K--TGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEA 681
K G + + SLI +YAKCG I+ A + F + K+ SWNAMI GF+ HG A +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 682 INLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVD 741
+LF +M+K + P+ +TFVG+LSACSH G+++ G F +M+ +Y + PK EHY C++D
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
Query: 742 LLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSAT 801
LLG +G A E M +EPD ++W +LL AC++H N+E+GE A +L+++EPE+ +
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 574
Query: 802 YVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKI 861
YVLLSNIYA+AG+W+ + R ++ D+G+KK PG S IE+ + +H F +GD+ HP +I
Sbjct: 575 YVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634
Query: 862 YDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILV 921
Y L + + + G+V + ++E+E K+ + HSEKLAIAFGL+S + +
Sbjct: 635 YGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 694
Query: 922 IKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
+KNLRVC +CH K +SKI R I+ RD RFHHF GVCSC DYW
Sbjct: 695 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 221/459 (48%), Gaps = 41/459 (8%)
Query: 16 LLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD---LDSAMKIFDDMS 72
LL C + SL + IH +++K+G K + S L A+ +F +
Sbjct: 39 LLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 73 KRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCV 132
+ + WN + G L L++ MI ++PN TF VL++C S A +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK--AFKEG 153
Query: 133 NQIHGLIISHG---------------------------FGGSP---LIS-NPLIDLYAKN 161
QIHG ++ G F SP ++S LI YA
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 162 GFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSAL 221
G+I++A+K+F+ + KD VSW AMISG+++ G +EA+ LF M P + + +
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 222 SACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGV 281
SAC + E+G Q H I GF S + NAL+ LYS+ G L +A +F ++ +D +
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 282 TYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYA 341
++N+LI G +AL LF++M P+ VT+ S++ ACA +GA G +H Y
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 342 IK--VGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSE 399
K G++ + S++D+Y KC D+E A++ F + +++ WN M+ +
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 400 SFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQI 438
SF +F +M+ G+ P+ T+ +L C+ G L LG I
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 204/448 (45%), Gaps = 58/448 (12%)
Query: 128 AVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDS---AKKVFNNLCFKDSVSWVA 184
+Q + IH +I G + + LI+ + + A VF + + + W
Sbjct: 45 TLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNT 104
Query: 185 MISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWG 244
M G + + A+ L+ M LG +P Y L +C K + F+ G+Q HG + K G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 245 FSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTY--------------------- 283
+ +V +L+++Y ++G L A ++F K RD V+Y
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 284 ----------NSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRT 333
N++ISG A+ G +ALELF+ M ++PD T+ ++VSACA G+
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 334 GEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQ 393
G Q+H + G ++ + +++DLY KC ++ETA F ++V+ WN ++ Y
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 394 LNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL----------- 442
+N E+ +F++M G TPN T +IL C LGA+ +G IH +
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 443 -------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQ 489
G++ A ++ + + SW AMI GF HG + +LF M
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 490 GIQSDNIGFSSAISACAGIQALNQGRQI 517
GIQ D+I F +SAC+ L+ GR I
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 190 bits (482), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 35/366 (9%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSA 64
G+ NS TF ++L+ C + E ++IHG +LKLG D + + ++Y+ +G L+ A
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 65 MKIFDDMSKRTVFS-------------------------------WNKLISGFVAKKLSG 93
K+FD R V S WN +ISG+
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 94 RVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNP 153
L LF M+ +V P+E+T V V+ AC SG++ + Q+H I HGFG + I N
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG--RQVHLWIDDHGFGSNLKIVNA 306
Query: 154 LIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPT 213
LIDLY+K G +++A +F L +KD +SW +I G++ +EA+LLF +M G P
Sbjct: 307 LIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366
Query: 214 PYAISSALSACTKIELFEIGEQFHGLIFKW--GFSSETFVCNALVTLYSRSGNLTSAEQI 271
+ S L AC + +IG H I K G ++ + + +L+ +Y++ G++ +A Q+
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 272 FSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAF 331
F+ + + ++N++I G A G +D + +LF +M+ ++PD +T L+SAC+ G
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Query: 332 RTGEQL 337
G +
Sbjct: 487 DLGRHI 492
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 4/237 (1%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M + ++ + T V ++ C GS+ +++H I GF + + ++Y G+
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
L++A +F+ + + V SWN LI G+ L L LF +M+ PN+ T + +L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 121 CIGSGNVAVQCVNQIHGLIISH--GFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKD 178
C G A+ IH I G + + LID+YAK G I++A +VFN++ K
Sbjct: 377 CAHLG--AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 179 SVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQ 235
SW AMI GF+ +G + LF +M +G P LSAC+ + ++G
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/595 (40%), Positives = 354/595 (59%), Gaps = 27/595 (4%)
Query: 396 DLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQI----------------- 438
DL + + +Q+ GL + TY +++ C S A+ G I
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 439 -----HTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQS 493
+ + LN A ++ ++P+ +V+SWT MI + + + +ALEL M ++
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 494 DNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVF 553
+ +SS + +C G+ + R +H G D+ + +ALI ++A+ G ++A VF
Sbjct: 161 NVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 554 NKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIK 613
+++ D I WN +I GFAQ+ + AL++F +M + G A T SV+ A LA ++
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 614 QGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFS 673
G Q H I+K YD + +N+L+ +Y KCGS++DA R F +M E++ ++W+ MI+G +
Sbjct: 278 LGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 674 QHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKP 733
Q+GY+ EA+ LFE+MK PN++T VGVL ACSH GL+ +G YF SM YG+ P
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 734 EHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLE 793
EHY C++DLLG+AG L A + +M EPDA+ WRTLL ACRV +NM + EYAA ++
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 794 LEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDR 853
L+PED+ TY LLSNIYA + KWD ++IR M+DRG+KKEPG SWIEV IHAF +GD
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDN 515
Query: 854 LHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSL 913
HP ++ L L R+ IGYV + DLE EQ + + HSEKLA+AFGL++L
Sbjct: 516 SHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTL 575
Query: 914 SDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
I + KNLR+C DCH + K SK+ R+IV+RD R+HHF+ G CSC DYW
Sbjct: 576 PIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 212/393 (53%), Gaps = 11/393 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
++ G+ A+S T+ L++ C+S ++ E I + G L + N+Y+
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
L+ A ++FD M +R V SW +IS + K+ + L L + M+ D+V PN T+ VLR+
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
C G +V + +H II G + + LID++AK G + A VF+ + D++
Sbjct: 172 CNGMSDVRM-----LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
W ++I GF+QN A+ LF +M G + ++S L ACT + L E+G Q H I
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
K + + + NALV +Y + G+L A ++F++M++RD +T++++ISGLAQ GYS +AL
Sbjct: 287 VK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVE--GSMLD 358
+LFE+M+ KP+ +T+ ++ AC+ G G + ++K D + E G M+D
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMID 403
Query: 359 LYVKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
L K ++ A K E E + V W +L A
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 191/426 (44%), Gaps = 28/426 (6%)
Query: 168 KKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHIL---GTVPTPYAISSALSAC 224
+ V C S ++S F++ Y+R+ M L G S + C
Sbjct: 12 RPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCC 71
Query: 225 TKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYN 284
G ++ G F+ N L+ +Y + L A Q+F +M QR+ +++
Sbjct: 72 ISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWT 131
Query: 285 SLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKV 344
++IS ++C KALEL M D ++P+ T +S++ +C + R LH IK
Sbjct: 132 TMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKE 188
Query: 345 GISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIF 404
G+ D+ V +++D++ K + E A F T + ++WN ++ + Q + + ++F
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 405 KQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL--------------------GN 444
K+M+ G Q T ++LR CT L L LG Q H + G+
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGS 308
Query: 445 LNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISA 504
L A + ++ E DV++W+ MI G Q+G EAL+LFE M++ G + + I + A
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 505 CAGIQALNQG-RQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAK-DNI 562
C+ L G + + G +I L + G++ +A + N+++ + D +
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 428
Query: 563 SWNGLI 568
+W L+
Sbjct: 429 TWRTLL 434
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/572 (39%), Positives = 355/572 (62%), Gaps = 23/572 (4%)
Query: 419 YPTILRTCTSLGALSLGEQIHTQL----------------------GNLNTAQEILRRLP 456
Y T+L+ CT L G +H + G+L A+++ ++P
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 457 EDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ 516
+ D V+WT +I G+ QH +AL F +M G + SS I A A + G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 517 IHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGY 576
+H GF ++ +G+AL+ LY R G + +A LVF+ +++++++SWN LI+G A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 577 CEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNS 636
E AL++F M + G + + +++ S+ A ++ ++QGK VHA +IK+G A N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 637 LITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPN 696
L+ +YAK GSI DA++ F + +++ VSWN+++T ++QHG+ EA+ FE+M++ + PN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 697 HVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFT 756
++F+ VL+ACSH GL++EG Y+E M + G+VP+ HY VVDLLGRAG L+RA F
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 757 EQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWD 816
E+MPIEP A +W+ LL+ACR+HKN E+G YAA H+ EL+P+D +V+L NIYA+ G+W+
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 817 CRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIG 876
++R+ MK+ GVKKEP SW+E++N+IH F D HP ++I + ++ E+G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 877 YVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIK 936
YV + ++Q++++ + HSEK+A+AF LL+ I + KN+RVC DCH IK
Sbjct: 542 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIK 601
Query: 937 FVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
SK+ R I+VRD NRFHHF+ G CSC+DYW
Sbjct: 602 LASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 229/517 (44%), Gaps = 45/517 (8%)
Query: 135 IHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGY 194
+H I+ F ++ N L+++YAK G ++ A+KVF + +D V+W +ISG+SQ+
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 195 EREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNA 254
+A+L F QM G P + +SS + A G Q HG K GF S V +A
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 255 LVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPD 314
L+ LY+R G + A+ +F ++ R+ V++N+LI+G A+ ++KALELF+ M D +P
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 315 CVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFL 374
+ ASL AC+S G G+ +H+Y IK G ++LD+Y K + A K F
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
Query: 375 TTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSL 434
+VV WN +L AY Q E+ F++M+ G+ PN+ ++ ++L C+ G L
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 435 GEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSD 494
G + + E + D++ + G AL EEM I+
Sbjct: 382 GWHYYELMKKDGIVPEAWHYVTVVDLLG---------RAGDLNRALRFIEEMP---IEPT 429
Query: 495 NIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFN 554
+ + ++AC + G A+ DD L ++YA GR +A V
Sbjct: 430 AAIWKALLNACRMHKNTELG-AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 555 KIDA------------------------------KDNIS--WNGLISGFAQSGYCEGALQ 582
K+ ++ I+ W +++ + GY
Sbjct: 489 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSH 548
Query: 583 VFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVH 619
V + Q + NL ++ A L N G +H
Sbjct: 549 VIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIH 585
Score = 192 bits (489), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 200/391 (51%), Gaps = 3/391 (0%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
+E I A+ + + LL+ C + L++ + +H IL+ F + V+ + N+Y G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
L+ A K+F+ M +R +W LISG+ L F QM+ PNE T V++A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
C +Q+HG + GF + + + L+DLY + G +D A+ VF+ L ++ V
Sbjct: 171 AAAERRGC--CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
SW A+I+G ++ +A+ LF M G P+ ++ +S AC+ E G+ H +
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
K G F N L+ +Y++SG++ A +IF ++ +RD V++NSL++ AQ G+ +A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLY 360
FE+M+ ++P+ ++ S+++AC+ G G + K GI + +++DL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL 408
Query: 361 VKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
+ D+ A +F E +W +L A
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 173 bits (438), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 182/376 (48%), Gaps = 23/376 (6%)
Query: 218 SSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQ 277
++ L CT +L G H I + F + + N L+ +Y++ G+L A ++F KM Q
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 278 RDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQL 337
RD VT+ +LISG +Q AL F +M P+ T++S++ A A+ G QL
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 338 HSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDL 397
H + +K G ++ V ++LDLY + ++ A F E+ N V WN ++ + + +
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 398 SESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL--------------- 442
++ ++F+ M +G P+ ++Y ++ C+S G L G+ +H +
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 443 -------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDN 495
G+++ A++I RL + DVVSW +++ + QHG EA+ FEEM GI+ +
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 496 IGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNK 555
I F S ++AC+ L++G + G + ++ L R G + A +
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 556 IDAKDNIS-WNGLISG 570
+ + + W L++
Sbjct: 424 MPIEPTAAIWKALLNA 439
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 160/294 (54%), Gaps = 2/294 (0%)
Query: 485 EMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCG 544
++E I +D +++ + C + L QGR +HA S F D+ +GN L+++YA+CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 545 RIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVS 604
++EA VF K+ +D ++W LISG++Q AL F+QM + G N +T SV+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 605 AAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVS 664
AAA G Q+H +K G+DS ++L+ LY + G +DDA+ F + +N+VS
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 665 WNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMS 724
WNA+I G ++ +A+ LF+ M + P+H ++ + ACS G + +G ++ +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYM 288
Query: 725 TEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVH 778
+ G ++D+ ++G + AR+ +++ + D + W +LL+A H
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQH 341
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/658 (35%), Positives = 387/658 (58%), Gaps = 25/658 (3%)
Query: 335 EQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQL 394
+Q+H+ + +G+ + ++ D+ A + F + WN ++ Y +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 395 NDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEIL-- 452
N ++ ++ MQ ++P+ +T+P +L+ C+ L L +G +H Q+ L ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 453 ----------RRL------------PEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQG 490
RRL PE +VSWTA++ + Q+G EALE+F +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 491 IQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAY 550
++ D + S ++A +Q L QGR IHA G + + +L ++YA+CG++ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 551 LVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLA 610
++F+K+ + + I WN +ISG+A++GY A+ +F +M V+ + + S +SA A +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 611 NIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMIT 670
+++Q + ++ + ++ Y + S++LI ++AKCGS++ A+ F +++ V W+AMI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 671 GFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLV 730
G+ HG A EAI+L+ M++ V PN VTF+G+L AC+H G+V EG +F M+ ++ +
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKIN 456
Query: 731 PKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANH 790
P+ +HYACV+DLLGRAG L +A E + MP++P VW LLSAC+ H+++E+GEYAA
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 791 LLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFV 850
L ++P ++ YV LSN+YAAA WD ++R MK++G+ K+ G SW+EV+ + AF V
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 851 GDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGL 910
GD+ HP ++I + + R+ E G+V + + DL E+ + + HSE++AIA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGL 636
Query: 911 LSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
+S P+ + KNLR C +CH K +SK+ +R IVVRD NRFHHF+ GVCSC DYW
Sbjct: 637 ISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 233 bits (594), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 243/483 (50%), Gaps = 34/483 (7%)
Query: 23 YGSLLEA-------KKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRT 75
Y SL+++ K+IH ++L LG L K + + GD+ A ++FDD+ +
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 76 VFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQI 135
+F WN +I G+ L ++ M V P+ TF +L+AC SG +Q +
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC--SGLSHLQMGRFV 141
Query: 136 HGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS--VSWVAMISGFSQNG 193
H + GF + N LI LYAK + SA+ VF L + VSW A++S ++QNG
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 194 YEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCN 253
EA+ +F QM + P A+ S L+A T ++ + G H + K G E +
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 254 ALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKP 313
+L T+Y++ G + +A+ +F KM+ + + +N++ISG A+ GY+ +A+++F +M ++P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 314 DCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFF 373
D +++ S +SACA VG+ ++ Y + D+ + +++D++ KC VE A F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 374 LTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALS 433
T +VV+W+ M+V YG E+ +++ M+ G+ PN T+ +L C G +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 434 LG--------------EQIHT--------QLGNLNTAQEILRRLP-EDDVVSWTAMIVGF 470
G +Q H + G+L+ A E+++ +P + V W A++
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 471 VQH 473
+H
Sbjct: 502 KKH 504
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 189/395 (47%), Gaps = 9/395 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M+ + +S TF LL+ C L + +H ++ +LGFD + + + +Y
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 61 LDSAMKIFD--DMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVL 118
L SA +F+ + +RT+ SW ++S + L +F QM DV P+ V VL
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 119 RA--CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCF 176
A C+ ++ IH ++ G P + L +YAK G + +AK +F+ +
Sbjct: 230 NAFTCLQD----LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS 285
Query: 177 KDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQF 236
+ + W AMISG+++NGY REAI +F +M P +I+SA+SAC ++ E
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 237 HGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYS 296
+ + + + + F+ +AL+ ++++ G++ A +F + RD V ++++I G G +
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRA 405
Query: 297 DKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSM 356
+A+ L+ M+ + P+ VT L+ AC G R G + I+ +
Sbjct: 406 REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV 465
Query: 357 LDLYVKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
+DL + ++ AY+ + V +W +L A
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 157/288 (54%), Gaps = 8/288 (2%)
Query: 488 NQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQ 547
N GI SD+ F +++ A +A Q +QIHA+ + G + LI + G I
Sbjct: 15 NSGIHSDS--FYASLIDSATHKA--QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 548 EAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAA 607
A VF+ + WN +I G++++ + + AL ++S M V + +TF ++ A +
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 608 NLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREF--LEMPEKNEVSW 665
L++++ G+ VHA + + G+D++ N LI LYAKC + A+ F L +PE+ VSW
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 666 NAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMST 725
A+++ ++Q+G +EA+ +F +M+K DV P+ V V VL+A + + + +G R +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG-RSIHASVV 249
Query: 726 EYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLS 773
+ GL +P+ + + + G ++ A+ ++M P+ ++W ++S
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMIS 296
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/758 (33%), Positives = 417/758 (55%), Gaps = 44/758 (5%)
Query: 152 NPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTV 211
N +I+ Y+K+ + A FN + +D VSW +M+SG+ QNG ++I +F M G
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 212 PTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQI 271
+ L C+ +E +G Q HG++ + G ++ +AL+ +Y++ + ++
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 272 FSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAF 331
F + +++ V+++++I+G Q AL+ F++MQ AS++ +CA++
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 332 RTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAY 391
R G QLH++A+K + D IV + LD+Y KC +++ A F +E N +N M+ Y
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 392 GQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH------------ 439
Q ++ +F ++ + GL ++ + + R C + LS G QI+
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 440 -------TQLGNLNTAQEILRRLPE---DDVVSWTAMIVGFVQHGMFGEALELFEEMENQ 489
G E R E D VSW A+I Q+G E L LF M
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 490 GIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEA 549
I+ D F S + AC G +L G +IH+ SG + + S+G +LI +Y++CG I+EA
Sbjct: 478 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 550 YLVFNKIDAKDNIS--------------------WNGLISGFAQSGYCEGALQVFSQMTQ 589
+ ++ + N+S WN +ISG+ E A +F++M +
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 590 VGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDD 649
+G+ + +T+ +V+ ANLA+ GKQ+HA +IK S+ ++L+ +Y+KCG + D
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD 656
Query: 650 AKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSH 709
++ F + ++ V+WNAMI G++ HG EAI LFE+M ++ PNHVTF+ +L AC+H
Sbjct: 657 SRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAH 716
Query: 710 VGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWR 769
+GL+++GL YF M +YGL P+ HY+ +VD+LG++G + RA E +MP E D ++WR
Sbjct: 717 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWR 776
Query: 770 TLLSACRVHK-NMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDR 828
TLL C +H+ N+E+ E A LL L+P+DS+ Y LLSN+YA AG W+ +R+ M+
Sbjct: 777 TLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGF 836
Query: 829 GVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLG 866
+KKEPG SW+E+K+ +H F VGD+ HP ++IY+ LG
Sbjct: 837 KLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELG 874
Score = 283 bits (725), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 187/736 (25%), Positives = 344/736 (46%), Gaps = 78/736 (10%)
Query: 9 NSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIF 68
++ F ++ + C G+L K+ H ++ GF + + +Y S D SA +F
Sbjct: 47 STTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVF 106
Query: 69 DDMSKRTVFSWNKLISGFVAKK-----------------------LSG--------RVLG 97
D M R V SWNK+I+G+ LSG + +
Sbjct: 107 DKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIE 166
Query: 98 LFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDL 157
+F+ M + + + TF +L+ C + ++ QIHG+++ G + ++ L+D+
Sbjct: 167 VFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGM--QIHGIVVRVGCDTDVVAASALLDM 224
Query: 158 YAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAI 217
YAK + +VF + K+SVSW A+I+G QN A+ F +M + +
Sbjct: 225 YAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 284
Query: 218 SSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQ 277
+S L +C + +G Q H K F+++ V A + +Y++ N+ A+ +F +
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 278 RDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQL 337
+ +YN++I+G +Q + KAL LF ++ L D ++++ + ACA V G Q+
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 338 HSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDL 397
+ AIK +S D+ V + +D+Y KC + A++ F + V WN ++ A+ Q
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 464
Query: 398 SESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHT----------------- 440
E+ +F M + P+++T+ +IL+ CT G+L G +IH+
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 441 ---------------------QLGNLNTAQEILRRLP----EDDVVSWTAMIVGFVQHGM 475
Q N++ E L ++ ++ VSW ++I G+V
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 476 FGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNA 535
+A LF M GI D +++ + CA + + G+QIHAQ D+ I +
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643
Query: 536 LISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQAN 595
L+ +Y++CG + ++ L+F K +D ++WN +I G+A G E A+Q+F +M ++ N
Sbjct: 644 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 703
Query: 596 LYTFGSVVSAAANLANIKQGKQVHAMIIKT-GYDSETEASNSLITLYAKCGSIDDAKREF 654
TF S++ A A++ I +G + M+ + G D + ++++ + K G + A
Sbjct: 704 HVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 763
Query: 655 LEMP-EKNEVSWNAMI 669
EMP E ++V W ++
Sbjct: 764 REMPFEADDVIWRTLL 779
Score = 236 bits (601), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 155/612 (25%), Positives = 293/612 (47%), Gaps = 47/612 (7%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M GI+ + +TF +L+ C +IHG ++++G D + V ++Y
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
++++F + ++ SW+ +I+G V L L F +M + +++ + VLR+
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
C + + Q+H + F ++ +D+YAK + A+ +F+N +
Sbjct: 291 CAALSELRLG--GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
S+ AMI+G+SQ + +A+LLF ++ G ++S AC ++ G Q +GL
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
K S + V NA + +Y + L A ++F +M++RD V++N++I+ Q G + L
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLY 360
LF M ++PD T S++ AC G+ G ++HS +K G++ + V S++D+Y
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMY 527
Query: 361 VKCSDVETAYK----FFLTTET----------------ENVVLWNVMLVAYGQLNDLSES 400
KC +E A K FF E V WN ++ Y ++
Sbjct: 528 SKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 587
Query: 401 FQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL------------------ 442
+F +M G+TP+++TY T+L TC +L + LG+QIH Q+
Sbjct: 588 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 647
Query: 443 ----GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGF 498
G+L+ ++ + + D V+W AMI G+ HG EA++LFE M + I+ +++ F
Sbjct: 648 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707
Query: 499 SSAISACAGIQALNQGRQ-IHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKID 557
S + ACA + +++G + + G L + ++ + + G+++ A + ++
Sbjct: 708 ISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 767
Query: 558 AK-DNISWNGLI 568
+ D++ W L+
Sbjct: 768 FEADDVIWRTLL 779
Score = 194 bits (492), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 232/485 (47%), Gaps = 59/485 (12%)
Query: 325 CASVGAFRTGEQLHSYAIKVGIS-------------------------------KDIIVE 353
CA GA G+Q H++ I G +D++
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 354 GSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLT 413
M++ Y K +D+ A FF +VV WN ML Y Q + +S ++F M EG+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 414 PNQYTYPTILRTCTSLGALSLGEQIH---TQLG-------------------NLNTAQEI 451
+ T+ IL+ C+ L SLG QIH ++G + +
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 452 LRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEME--NQGIQSDNIGFSSAISACAGIQ 509
+ +PE + VSW+A+I G VQ+ + AL+ F+EM+ N G+ S +I ++S + +CA +
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV-SQSI-YASVLRSCAALS 295
Query: 510 ALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLIS 569
L G Q+HA + S F+ D + A + +YA+C +Q+A ++F+ + + S+N +I+
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 570 GFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDS 629
G++Q + AL +F ++ G+ + + V A A + + +G Q++ + IK+
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415
Query: 630 ETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMK 689
+ +N+ I +Y KC ++ +A R F EM ++ VSWNA+I Q+G E + LF M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 690 KHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCL 749
+ + P+ TF +L AC+ G + G+ S+ + G+ ++D+ + G +
Sbjct: 476 RSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI-VKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 750 SRARE 754
A +
Sbjct: 534 EEAEK 538
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 124/257 (48%), Gaps = 31/257 (12%)
Query: 483 FEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYAR 542
F + NQ FS CA AL G+Q HA ISGF + N L+ +Y
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 543 CGRIQEAYLVFNKIDAKDNISWNGLISGFAQ--------------------------SGY 576
A +VF+K+ +D +SWN +I+G+++ SGY
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 577 CEG-----ALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSET 631
+ +++VF M + G++ + TF ++ + L + G Q+H ++++ G D++
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 632 EASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKH 691
A+++L+ +YAK ++ R F +PEKN VSW+A+I G Q+ A+ F++M+K
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 692 DVMPNHVTFVGVLSACS 708
+ + + VL +C+
Sbjct: 276 NAGVSQSIYASVLRSCA 292
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 22/312 (7%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSA 64
G+ +NS L++ G + EA+KIH + FF SG ++
Sbjct: 512 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSR---------------FFQRANVSGTMEEL 556
Query: 65 MKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGS 124
K+ + + SWN +ISG+V K+ S LF +M++ + P++ T+ VL C
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 125 GNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVA 184
+ + QIH +I I + L+D+Y+K G + ++ +F +D V+W A
Sbjct: 617 ASAGLG--KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 674
Query: 185 MISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIG-EQFHGLIFKW 243
MI G++ +G EAI LF +M + P S L AC + L + G E F+ + +
Sbjct: 675 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 734
Query: 244 GFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ-QRDGVTYNSLISGLAQCGYSDKALEL 302
G + + +V + +SG + A ++ +M + D V + +L L C +E+
Sbjct: 735 GLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTL---LGVCTIHRNNVEV 791
Query: 303 FEKMQLDCLKPD 314
E+ L+ D
Sbjct: 792 AEEATAALLRLD 803
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 52/234 (22%)
Query: 584 FSQMTQVGVQANLYT---FGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITL 640
FS T Q N + F V A ++ GKQ HA +I +G+ T N L+ +
Sbjct: 33 FSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQV 92
Query: 641 YAKCGSIDDAKREFLEMPEKNEVSWNAMITGFS--------------------------- 673
Y A F +MP ++ VSWN MI G+S
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 674 ----QHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGL 729
Q+G +L++I +F M + + + TF +L CS + + G++ +G+
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI-------HGI 205
Query: 730 VPKPEHYACVVDLLGRAGCL---SRAREFTEQMPI-----EPDAMVWRTLLSAC 775
V + C D++ + L ++ + F E + + E +++ W +++ C
Sbjct: 206 VVR---VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGC 256
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/714 (35%), Positives = 380/714 (53%), Gaps = 96/714 (13%)
Query: 349 DIIVEGSMLDLYVKCSDVETAYKFFLTTET--ENVVLWNVMLVAYGQLNDLSESFQIFKQ 406
D I +M+ Y D+ A F + V++N M+ + ND + +F +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 407 MQTEGLTPNQYTYPTIL----------RTCTSLGALSL--GEQIHTQLGN---------- 444
M+ EG P+ +T+ ++L + C A +L G T + N
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 445 -----LNTAQEILRRLPEDDVVSWT--------------------------------AMI 467
L++A+++ + E D SWT AMI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 468 VGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFS 527
G+V G + EALE+ M + GI+ D + S I ACA L G+Q+HA Y+
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA--YVLRRE 316
Query: 528 D-DLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGF--------------- 571
D N+L+SLY +CG+ EA +F K+ AKD +SWN L+SG+
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 572 ----------------AQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQG 615
A++G+ E L++FS M + G + Y F + + A L G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 616 KQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQH 675
+Q HA ++K G+DS A N+LIT+YAKCG +++A++ F MP + VSWNA+I QH
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 676 GYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEH 735
G+ EA++++E+M K + P+ +T + VL+ACSH GLV++G +YF+SM T Y + P +H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 736 YACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELE 795
YA ++DLL R+G S A E +P +P A +W LLS CRVH NME+G AA+ L L
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 796 PEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLH 855
PE TY+LLSN++AA G+W+ ++R++M+DRGVKKE SWIE++ +H F V D H
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 856 PLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQE-QKDPCVYIHSEKLAIAFGLLSLS 914
P A+ +Y YL +L + + +GYV + D+E + K+ + HSEK+A+AFGL+ L
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLP 736
Query: 915 DSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
I + KNLR C DCHN+ +F+S + R I++RD RFHHF G CSC ++W
Sbjct: 737 PGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 209 bits (532), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 155/615 (25%), Positives = 266/615 (43%), Gaps = 130/615 (21%)
Query: 207 ILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLT 266
++ + YA + L + ++ HG I +GF + N L+ +Y +S L
Sbjct: 7 LVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELN 66
Query: 267 SAEQIFSKMQQ---------------------------------RDGVTYNSLISGLAQC 293
A Q+F ++ + RD V YN++I+G +
Sbjct: 67 YARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHN 126
Query: 294 GYSDKALELFEKMQLDCLKPDCVTVASLVSACASVG-AFRTGEQLHSYAIKVGISKDIIV 352
A+ LF KM+ + KPD T AS+++ A V + Q H+ A+K G V
Sbjct: 127 NDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV 186
Query: 353 EGSMLDLYVKCSD----VETAYKFF--------------LTTETEN-------------- 380
+++ +Y KC+ + +A K F +T +N
Sbjct: 187 SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMD 246
Query: 381 ----VVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGE 436
+V +N M+ Y E+ ++ ++M + G+ +++TYP+++R C + G L LG+
Sbjct: 247 DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
Query: 437 QIHT---------------------QLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGM 475
Q+H + G + A+ I ++P D+VSW A++ G+V G
Sbjct: 307 QVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 476 FGEA-------------------------------LELFEEMENQGIQSDNIGFSSAISA 504
GEA L+LF M+ +G + + FS AI +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 505 CAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISW 564
CA + A G+Q HAQ GF LS GNALI++YA+CG ++EA VF + D++SW
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 565 NGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIK 624
N LI+ Q G+ A+ V+ +M + G++ + T +V++A ++ + QG++ ++
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS-ME 545
Query: 625 TGYDSETEASN--SLITLYAKCGSIDDAKREFLEMPEKNEVS-WNAMITGFSQHGYA--- 678
T Y A + LI L + G DA+ +P K W A+++G HG
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 679 -LEAINLFEKMKKHD 692
+ A LF + +HD
Sbjct: 606 IIAADKLFGLIPEHD 620
Score = 193 bits (490), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 244/584 (41%), Gaps = 130/584 (22%)
Query: 114 FVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNN 173
+ LR C+ ++Q +HG II+ GF I N LID+Y K+ ++ A+++F+
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 174 L---------------------------------CFKDSVSWVAMISGFSQNGYEREAIL 200
+ C +D+V + AMI+GFS N AI
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 201 LFCQMHILGTVPTPYAISSALSACTKIELFEIG-EQFHGLIFKWGFSSETFVCNALVTLY 259
LFC+M G P + +S L+ + E QFH K G T V NALV++Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 260 SRSGN----LTSAEQIFSKMQQRDG--------------------------------VTY 283
S+ + L SA ++F ++ ++D V Y
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 284 NSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIK 343
N++ISG G+ +ALE+ +M ++ D T S++ ACA+ G + G+Q+H+Y ++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 344 VGISKDII--VEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESF 401
+D + S++ LY KC + A F +++V WN +L Y + E+
Sbjct: 315 ---REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 402 QIFKQ-------------------------------MQTEGLTPNQYTYPTILRTCTSLG 430
IFK+ M+ EG P Y + +++C LG
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 431 ALSLGEQIHTQL----------------------GNLNTAQEILRRLPEDDVVSWTAMIV 468
A G+Q H QL G + A+++ R +P D VSW A+I
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 469 GFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ-IHAQSYISGFS 527
QHG EA++++EEM +GI+ D I + ++AC+ ++QGR+ + +
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 528 DDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNIS-WNGLISG 570
LI L R G+ +A V + K W L+SG
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/566 (24%), Positives = 241/566 (42%), Gaps = 110/566 (19%)
Query: 21 LSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSK------- 73
L SL A+ +HG I+ GF + ++ ++Y S +L+ A ++FD++S+
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIART 84
Query: 74 ---------------RTVFS-----------WNKLISGFVAKKLSGRVLGLFLQMIDDDV 107
R VF +N +I+GF + LF +M +
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 108 IPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAK----NGF 163
P+ TF VL + QCV Q H + G G +SN L+ +Y+K
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCV-QFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 164 IDSAKKVFNNLCFKDSVSWVAMISGFSQNGY----------------------------- 194
+ SA+KVF+ + KD SW M++G+ +NGY
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 195 ---EREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFV 251
+EA+ + +M G + S + AC L ++G+Q H + + S F
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 252 CNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSL------------------------- 286
N+LV+LY + G A IF KM +D V++N+L
Sbjct: 324 -NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 287 ------ISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSY 340
ISGLA+ G+ ++ L+LF M+ + +P + + +CA +GA+ G+Q H+
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 341 AIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSES 400
+K+G + +++ +Y KC VE A + F T + V WN ++ A GQ +E+
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 401 FQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDV 460
++++M +G+ P++ T T+L C+ G + G + ++ + + R P D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKY------FDSMETVYRIPPGAD- 555
Query: 461 VSWTAMIVGFVQHGMFGEALELFEEM 486
+ +I + G F +A + E +
Sbjct: 556 -HYARLIDLLCRSGKFSDAESVIESL 580
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 40/364 (10%)
Query: 6 IQANSQTFVWLLEGCLSYGSLLE-AKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSA 64
I + S V + C S SLL A+K+ +IL + ++ Y+ +G D
Sbjct: 183 ITSVSNALVSVYSKCASSPSLLHSARKVFDEIL----EKDERSWTTMMTGYVKNGYFDLG 238
Query: 65 MKIFDDMSKR-TVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIG 123
++ + M + ++N +ISG+V + L + +M+ + +E T+ V+RAC
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 124 SGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWV 183
+G +Q Q+H ++ S N L+ LY K G D A+ +F + KD VSW
Sbjct: 299 AG--LLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWN 355
Query: 184 A-------------------------------MISGFSQNGYEREAILLFCQMHILGTVP 212
A MISG ++NG+ E + LF M G P
Sbjct: 356 ALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415
Query: 213 TPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIF 272
YA S A+ +C + + G+Q+H + K GF S NAL+T+Y++ G + A Q+F
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF 475
Query: 273 SKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFR 332
M D V++N+LI+ L Q G+ +A++++E+M ++PD +T+ ++++AC+ G
Sbjct: 476 RTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVD 535
Query: 333 TGEQ 336
G +
Sbjct: 536 QGRK 539
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 50/329 (15%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILK-----LGFDGEQVLCDKFFNIY 55
M GI+ + T+ ++ C + G L K++H +L+ FD V ++Y
Sbjct: 277 MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLV------SLY 330
Query: 56 LTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVI------- 108
G D A IF+ M + + SWN L+SG+V+ G +F +M + +++
Sbjct: 331 YKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390
Query: 109 ------------------------PNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGF 144
P + F G +++C G A Q H ++ GF
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG--AYCNGQQYHAQLLKIGF 448
Query: 145 GGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQ 204
S N LI +YAK G ++ A++VF + DSVSW A+I+ Q+G+ EA+ ++ +
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 205 MHILGTVPTPYAISSALSACTKIELFEIGEQFHG---LIFKWGFSSETFVCNALVTLYSR 261
M G P + + L+AC+ L + G ++ +++ ++ + L+ L R
Sbjct: 509 MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA--RLIDLLCR 566
Query: 262 SGNLTSAEQIFSKMQ-QRDGVTYNSLISG 289
SG + AE + + + + +L+SG
Sbjct: 567 SGKFSDAESVIESLPFKPTAEIWEALLSG 595
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/707 (35%), Positives = 391/707 (55%), Gaps = 61/707 (8%)
Query: 320 SLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCS--DVETAYKFFLTTE 377
SL+ C S+ R +Q H + I+ G D + + S +E A K F
Sbjct: 35 SLIERCVSL---RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 378 TENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEG-LTPNQYTYPTILRTCTSLGALSLGE 436
N WN ++ AY D S F M +E PN+YT+P +++ + +LSLG+
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 437 QIHT----------------------QLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHG 474
+H G+L++A ++ + E DVVSW +MI GFVQ G
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 475 MFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGN 534
+ALELF++ME++ +++ ++ +SACA I+ L GRQ+ + + + +L++ N
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 535 ALISLYARCGRIQEAYLVFNKIDAKDNISW------------------------------ 564
A++ +Y +CG I++A +F+ ++ KDN++W
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 565 -NGLISGFAQSGYCEGALQVFSQMT-QVGVQANLYTFGSVVSAAANLANIKQGKQVHAMI 622
N LIS + Q+G AL VF ++ Q ++ N T S +SA A + ++ G+ +H+ I
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 623 IKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAI 682
K G +++LI +Y+KCG ++ ++ F + +++ W+AMI G + HG EA+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 683 NLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDL 742
++F KM++ +V PN VTF V ACSH GLV+E F M + YG+VP+ +HYAC+VD+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 743 LGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATY 802
LGR+G L +A +F E MPI P VW LL AC++H N+ + E A LLELEP + +
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 803 VLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIY 862
VLLSNIYA GKW+ ++R+ M+ G+KKEPG S IE+ IH F GD HP+++K+Y
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 631
Query: 863 DYLGNLNRRVAEIGYVQGRYSLWSDLEQEQ-KDPCVYIHSEKLAIAFGLLSLSDSMPILV 921
L + ++ GY + +E+E+ K+ + +HSEKLAI +GL+S I V
Sbjct: 632 GKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRV 691
Query: 922 IKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
IKNLRVC DCH+ K +S++ +R I+VRD RFHHF G CSC D+W
Sbjct: 692 IKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 224/462 (48%), Gaps = 40/462 (8%)
Query: 16 LLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTS--GDLDSAMKIFDDMSK 73
L+E C+S L + K+ HG +++ G + K F + S L+ A K+FD++ K
Sbjct: 36 LIERCVS---LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 74 RTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDD-VIPNEATFVGVLRACIGSGNVAVQCV 132
F+WN LI + + + FL M+ + PN+ TF +++A ++++
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG-- 150
Query: 133 NQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQN 192
+HG+ + G ++N LI Y G +DSA KVF + KD VSW +MI+GF Q
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 193 GYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVC 252
G +A+ LF +M + + LSAC KI E G Q I + + +
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 253 NALVTLYSRSGNLTSAEQIFSKMQQRDGVT------------------------------ 282
NA++ +Y++ G++ A+++F M+++D VT
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 283 -YNSLISGLAQCGYSDKALELFEKMQLD-CLKPDCVTVASLVSACASVGAFRTGEQLHSY 340
+N+LIS Q G ++AL +F ++QL +K + +T+ S +SACA VGA G +HSY
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 341 AIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSES 400
K GI + V +++ +Y KC D+E + + F + E +V +W+ M+ +E+
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 401 FQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL 442
+F +MQ + PN T+ + C+ G + E + Q+
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 233/501 (46%), Gaps = 59/501 (11%)
Query: 127 VAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGF--IDSAKKVFNNLCFKDSVSWVA 184
V+++ + Q HG +I G P ++ L + A + F ++ A+KVF+ + +S +W
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 185 MISGFSQNGYEREAILLFCQMHILGTV-PTPYAISSALSACTKIELFEIGEQFHGLIFKW 243
+I ++ +I F M P Y + A ++ +G+ HG+ K
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 244 GFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELF 303
S+ FV N+L+ Y G+L SA ++F+ ++++D V++NS+I+G Q G DKALELF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 304 EKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKC 363
+KM+ + +K VT+ ++SACA + G Q+ SY + ++ ++ + +MLD+Y KC
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 364 SDVETAYKFFLTTE-------------------------------TENVVLWNVMLVAYG 392
+E A + F E +++V WN ++ AY
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 393 QLNDLSESFQIFKQMQTE-GLTPNQYTYPTILRTCTSLGALSLGEQIH------------ 439
Q +E+ +F ++Q + + NQ T + L C +GAL LG IH
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 440 ----------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQ 489
++ G+L ++E+ + + DV W+AMI G HG EA+++F +M+
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 490 GIQSDNIGFSSAISACAGIQALNQGRQI-HAQSYISGFSDDLSIGNALISLYARCGRIQE 548
++ + + F++ AC+ +++ + H G + ++ + R G +++
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 549 AYLVFNKIDAKDNIS-WNGLI 568
A + + S W L+
Sbjct: 521 AVKFIEAMPIPPSTSVWGALL 541
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 231/505 (45%), Gaps = 65/505 (12%)
Query: 234 EQFHGLIFKWGFSSETFVCNALVTLYSRS--GNLTSAEQIFSKMQQRDGVTYNSLISGLA 291
+Q HG + + G S+ + + L + + S +L A ++F ++ + + +N+LI A
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 292 QCGYSDKALELFEKMQL----DCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGIS 347
D L ++ + + C P+ T L+ A A V + G+ LH A+K +
Sbjct: 107 SG--PDPVLSIWAFLDMVSESQCY-PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163
Query: 348 KDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQM 407
D+ V S++ Y C D+++A K F T + ++VV WN M+ + Q ++ ++FK+M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 408 QTEGLTPNQYTYPTILRTCTSLGALSLGEQI----------------------HTQLGNL 445
++E + + T +L C + L G Q+ +T+ G++
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 446 -------------------------------NTAQEILRRLPEDDVVSWTAMIVGFVQHG 474
A+E+L +P+ D+V+W A+I + Q+G
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 475 MFGEALELFEEMENQ-GIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIG 533
EAL +F E++ Q ++ + I S +SACA + AL GR IH+ G + +
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 534 NALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQ 593
+ALI +Y++CG ++++ VFN ++ +D W+ +I G A G A+ +F +M + V+
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 594 ANLYTFGSVVSAAANLANIKQGKQV-HAMIIKTGYDSETEASNSLITLYAKCGSIDDAKR 652
N TF +V A ++ + + + + H M G E + ++ + + G ++ A +
Sbjct: 464 PNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVK 523
Query: 653 EFLEMPEKNEVS-WNAMITGFSQHG 676
MP S W A++ H
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHA 548
Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 195/398 (48%), Gaps = 35/398 (8%)
Query: 9 NSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIF 68
N TF +L++ SL + +HG +K + + + + Y + GDLDSA K+F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 69 DDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVA 128
+ ++ V SWN +I+GFV K + L LF +M +DV + T VGVL AC N+
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 129 VQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVF----------------- 171
Q+ I + + ++N ++D+Y K G I+ AK++F
Sbjct: 250 FG--RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 172 --------------NNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVP-TPYA 216
N++ KD V+W A+IS + QNG EA+++F ++ + +
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 217 ISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ 276
+ S LSAC ++ E+G H I K G V +AL+ +YS+ G+L + ++F+ ++
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 277 QRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQ 336
+RD ++++I GLA G ++A+++F KMQ +KP+ VT ++ AC+ G E
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 337 L-HSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFF 373
L H GI + ++D+ + +E A KF
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 8/277 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
+EE + N +L+ GS+ +AK++ + + + V + Y S D
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME----EKDNVTWTTMLDGYAISED 313
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQM-IDDDVIPNEATFVGVLR 119
++A ++ + M ++ + +WN LIS + L +F ++ + ++ N+ T V L
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 120 ACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS 179
AC G A++ IH I HG + +++ LI +Y+K G ++ +++VFN++ +D
Sbjct: 374 ACAQVG--ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQ-FHG 238
W AMI G + +G EA+ +F +M P ++ AC+ L + E FH
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491
Query: 239 LIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKM 275
+ +G E +V + RSG L A + M
Sbjct: 492 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 3 ERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLD 62
++ ++ N T V L C G+L + IH I K G + ++Y GDL+
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 63 SAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACI 122
+ ++F+ + KR VF W+ +I G + +F +M + +V PN TF V AC
Sbjct: 418 KSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 123 GSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVS- 181
+G V + + H + ++G ++D+ ++G+++ A K + S S
Sbjct: 478 HTGLVD-EAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSV 536
Query: 182 WVAMI 186
W A++
Sbjct: 537 WGALL 541
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 603 VSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYA--KCGSIDDAKREFLEMPEK 660
+S +++Q KQ H +I+TG S+ +++ L + A S++ A++ F E+P+
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 661 NEVSWNAMITGFSQHGYALEAINLFEKM-KKHDVMPNHVTFVGVLSACSHVGLVNEG 716
N +WN +I ++ + +I F M + PN TF ++ A + V ++ G
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/863 (29%), Positives = 455/863 (52%), Gaps = 51/863 (5%)
Query: 134 QIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNG 193
IH +I G + + N L+ LY K I +A+K+F+ + + +W MIS F+++
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 194 YEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCN 253
A+ LF +M GT P + SS + +C + G + HG + K GF + V +
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 254 ALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKP 313
+L LYS+ G A ++FS +Q D +++ +IS L +AL+ + +M + P
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 314 DCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFF 373
+ T L+ A + +G G+ +HS I GI +++++ S++D Y + S +E A +
Sbjct: 224 NEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL 282
Query: 374 LTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALS 433
++ ++V LW ++ + + E+ F +M++ GL PN +TY IL C+++ +L
Sbjct: 283 NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLD 342
Query: 434 LGEQIHTQ-----------LGNLNT------------AQEILRRLPEDDVVSWTAMIVGF 470
G+QIH+Q +GN A + + +VVSWT +I+G
Sbjct: 343 FGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGL 402
Query: 471 VQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDL 530
V HG + L EM + ++ + + S + AC+ ++ + + +IHA ++
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 531 SIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQV 590
+GN+L+ YA ++ A+ V + +DNI++ L++ F + G E AL V + M
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 591 GVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDA 650
G++ + + +SA+ANL ++ GK +H +K+G+ NSL+ +Y+KCGS++DA
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 651 KREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHV 710
K+ F E+ + VSWN +++G + +G+ A++ FE+M+ + P+ VTF+ +LSACS+
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNG 642
Query: 711 GLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRT 770
L + GL YF+ M Y + P+ EHY +V +LGRAG L A E M ++P+AM+++T
Sbjct: 643 RLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKT 702
Query: 771 LLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGV 830
LL ACR N+ +GE AN L L P D A Y+LL+++Y +GK + + R +M ++ +
Sbjct: 703 LLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762
Query: 831 KKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQ 890
K+ G+S +EV+ +H+F D V + G Y+ +++
Sbjct: 763 SKKLGKSTVEVQGKVHSFVSED-------------------VTRVDKTNGIYAEIESIKE 803
Query: 891 EQK--------DPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKIS 942
E K + HS K A+ +G + S P+ V+KN +C DCH ++ ++++
Sbjct: 804 EIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLV 863
Query: 943 NRTIVVRDANRFHHFEGGVCSCR 965
++ I VRD N+ H F+ G CSC+
Sbjct: 864 DKKITVRDGNQVHIFKNGECSCK 886
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 204/743 (27%), Positives = 354/743 (47%), Gaps = 69/743 (9%)
Query: 32 IHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKL 91
IH ++K G LC+ ++YL + + +A K+FD+MS RTVF+W +IS F +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 92 SGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLIS 151
L LF +M+ PNE TF V+R+C G +++ ++HG +I GF G+ ++
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG--GRVHGSVIKTGFEGNSVVG 162
Query: 152 NPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTV 211
+ L DLY+K G A ++F++L D++SW MIS REA+ + +M G
Sbjct: 163 SSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVP 222
Query: 212 PTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQI 271
P + L A + + L E G+ H I G + +LV YS+ + A ++
Sbjct: 223 PNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 272 FSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAF 331
+ ++D + S++SG + + +A+ F +M+ L+P+ T ++++S C++V +
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 332 RTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVET-AYKFFLTTETENVVLWNVMLVA 390
G+Q+HS IKVG V +++D+Y+KCS E A + F + NVV W +++
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 391 YGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL-------- 442
+ + F + +M + PN T +LR C+ L + +IH L
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGE 461
Query: 443 ---GN-----------LNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMEN 488
GN ++ A ++R + D +++T+++ F + G AL + M
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 489 QGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQE 548
GI+ D + ISA A + AL G+ +H S SGFS S+ N+L+ +Y++CG +++
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 549 AYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAAN 608
A VF +I D +SWNGL+SG A +G+ AL F +M + + TF ++SA +N
Sbjct: 582 AKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
Query: 609 LANIKQGKQVHAMIIKTGYDSETEASN--SLITLYAKCGSIDDAKREFLEMPEKNEVSWN 666
G + + ++K Y+ E + + L+ + + G ++
Sbjct: 642 GRLTDLGLE-YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLE------------------ 682
Query: 667 AMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTE 726
EA + E M + PN + F +L AC + G ++ G E M+ +
Sbjct: 683 -------------EATGVVETMH---LKPNAMIFKTLLRACRYRGNLSLG----EDMANK 722
Query: 727 -YGLVPK-PEHYACVVDLLGRAG 747
L P P Y + DL +G
Sbjct: 723 GLALAPSDPALYILLADLYDESG 745
Score = 256 bits (655), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/621 (25%), Positives = 301/621 (48%), Gaps = 29/621 (4%)
Query: 231 EIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGL 290
IG H + K+G +CN L++LY ++ + +A ++F +M R + +IS
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 291 AQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDI 350
+ AL LFE+M P+ T +S+V +CA + G ++H IK G +
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 351 IVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTE 410
+V S+ DLY KC + A + F + + + + W +M+ + E+ Q + +M
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 411 GLTPNQYTYPTILRTCTSLGALSLGEQIH----------------------TQLGNLNTA 448
G+ PN++T+ +L + LG L G+ IH +Q + A
Sbjct: 220 GVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 449 QEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGI 508
+L E DV WT+++ GFV++ EA+ F EM + G+Q +N +S+ +S C+ +
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAV 338
Query: 509 QALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQ-EAYLVFNKIDAKDNISWNGL 567
++L+ G+QIH+Q+ GF D +GNAL+ +Y +C + EA VF + + + +SW L
Sbjct: 339 RSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTL 398
Query: 568 ISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGY 627
I G G+ + + +M + V+ N+ T V+ A + L ++++ ++HA +++
Sbjct: 399 ILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHV 458
Query: 628 DSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEK 687
D E NSL+ YA +D A M ++ +++ +++T F++ G A+++
Sbjct: 459 DGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINY 518
Query: 688 MKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAG 747
M + + ++ G +SA +++G + G ++ S + G +VD+ + G
Sbjct: 519 MYGDGIRMDQLSLPGFISASANLGALETG-KHLHCYSVKSGFSGAASVLNSLVDMYSKCG 577
Query: 748 CLSRAREFTEQMPIEPDAMVWRTLLS--ACRVHKNMEIGEYAANHLLELEPEDSATYVLL 805
L A++ E++ PD + W L+S A + + + + E EP DS T+++L
Sbjct: 578 SLEDAKKVFEEIAT-PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP-DSVTFLIL 635
Query: 806 SNIYAAAGKWDCRDQIRQIMK 826
+ + D + Q+MK
Sbjct: 636 LSACSNGRLTDLGLEYFQVMK 656
Score = 233 bits (594), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/585 (24%), Positives = 268/585 (45%), Gaps = 27/585 (4%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M G N TF ++ C + ++HG ++K GF+G V+ ++Y G
Sbjct: 115 MMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
A ++F + SW +IS V + L + +M+ V PNE TFV +L A
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
S + ++ IH II G + ++ L+D Y++ ++ A +V N+ +D
Sbjct: 235 ---SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVF 291
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
W +++SGF +N +EA+ F +M LG P + S+ LS C+ + + G+Q H
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQT 351
Query: 241 FKWGFSSETFVCNALVTLYSR-SGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKA 299
K GF T V NALV +Y + S + A ++F M + V++ +LI GL G+
Sbjct: 352 IKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDC 411
Query: 300 LELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDL 359
L +M ++P+ VT++ ++ AC+ + R ++H+Y ++ + +++V S++D
Sbjct: 412 FGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDA 471
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
Y V+ A+ + + + + + ++ + +L + + M +G+ +Q +
Sbjct: 472 YASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSL 531
Query: 420 PTILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPE 457
P + +LGAL G+ +H ++ G+L A+++ +
Sbjct: 532 PGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT 591
Query: 458 DDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ- 516
DVVSW ++ G +G AL FEEM + + D++ F +SAC+ + + G +
Sbjct: 592 PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEY 651
Query: 517 IHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDN 561
I + L+ + R GR++EA V + K N
Sbjct: 652 FQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPN 696
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 264/576 (45%), Gaps = 70/576 (12%)
Query: 307 QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDV 366
+L L+ C+ + S + +S R G +H IK G+ +++ + ++L LY+K +
Sbjct: 19 ELGNLQKSCIRILSFCESNSS----RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGI 74
Query: 367 ETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTC 426
A K F V W VM+ A+ + + + + +F++M G PN++T+ +++R+C
Sbjct: 75 WNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC 134
Query: 427 TSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWT 464
L +S G ++H ++ G A E+ L D +SWT
Sbjct: 135 AGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWT 194
Query: 465 AMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYIS 524
MI V + EAL+ + EM G+ + F + A + + L G+ IH+ +
Sbjct: 195 MMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVR 253
Query: 525 GFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVF 584
G ++ + +L+ Y++ ++++A V N +D W ++SGF ++ + A+ F
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTF 313
Query: 585 SQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKC 644
+M +G+Q N +T+ +++S + + ++ GKQ+H+ IK G++ T+ N+L+ +Y KC
Sbjct: 314 LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC 373
Query: 645 GSID-DAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGV 703
+ + +A R F M N VSW +I G HG+ + L +M K +V PN VT GV
Sbjct: 374 SASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGV 433
Query: 704 LSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEP 763
L ACS K H V+++ A L R ++
Sbjct: 434 LRACS-----------------------KLRHVRRVLEI--HAYLLRRH--------VDG 460
Query: 764 DAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQ 823
+ +V +L+ A + + +YA N + ++ D+ TY L + GK + +
Sbjct: 461 EMVVGNSLVDAYASSRKV---DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVIN 517
Query: 824 IMKDRGVKKE----PGQSWIEVKNSIHAFFVGDRLH 855
M G++ + PG +I ++ A G LH
Sbjct: 518 YMYGDGIRMDQLSLPG--FISASANLGALETGKHLH 551
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/674 (36%), Positives = 382/674 (56%), Gaps = 27/674 (4%)
Query: 321 LVSACASVGAFRTGEQLHSYAIKVGISKDI-IVEGSMLDLYVKCSDVETAYKFFLTTETE 379
L+ S + R G +H+ +K S + ++++Y K E+A T
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 380 NVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH 439
NVV W ++ Q S + F +M+ EG+ PN +T+P + SL G+QIH
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 440 T---QLGNL-------------------NTAQEILRRLPEDDVVSWTAMIVGFVQHGMFG 477
+ G + + A+++ +PE ++ +W A I V G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 478 EALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALI 537
EA+E F E ++I F + ++AC+ LN G Q+H SGF D+S+ N LI
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 538 SLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLY 597
Y +C +I+ + ++F ++ K+ +SW L++ + Q+ E A ++ + + V+ + +
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311
Query: 598 TFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEM 657
SV+SA A +A ++ G+ +HA +K + ++L+ +Y KCG I+D+++ F EM
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 658 PEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDV--MPNHVTFVGVLSACSHVGLVNE 715
PEKN V+ N++I G++ G A+ LFE+M PN++TFV +LSACS G V
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431
Query: 716 GLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSAC 775
G++ F+SM + YG+ P EHY+C+VD+LGRAG + RA EF ++MPI+P VW L +AC
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491
Query: 776 RVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPG 835
R+H ++G AA +L +L+P+DS +VLLSN +AAAG+W + +R+ +K G+KK G
Sbjct: 492 RMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 551
Query: 836 QSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQG-RYSLWSDLEQEQKD 894
SWI VKN +HAF DR H L +I L L + GY + SL+ DLE+E+K
Sbjct: 552 YSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLY-DLEEEEKA 610
Query: 895 PCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRF 954
V HSEKLA+AFGLLSL S+PI + KNLR+C DCH++ KFVS R I+VRD NRF
Sbjct: 611 AEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRF 670
Query: 955 HHFEGGVCSCRDYW 968
H F+ G+CSC+DYW
Sbjct: 671 HRFKDGICSCKDYW 684
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 224/486 (46%), Gaps = 29/486 (5%)
Query: 16 LLEGCLSYGSLLEAKKIHGKILK-LGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKR 74
LL+ +S S+ + +H +I+K L L + N+Y +SA + R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 75 TVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQ 134
V SW LISG L F +M + V+PN+ TF +A + S + V Q
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKA-VASLRLPVTG-KQ 129
Query: 135 IHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGY 194
IH L + G + D+Y K D A+K+F+ + ++ +W A IS +G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 195 EREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNA 254
REAI F + + P + L+AC+ +G Q HGL+ + GF ++ VCN
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 255 LVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPD 314
L+ Y + + S+E IF++M ++ V++ SL++ Q +KA L+ + + D ++
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 315 CVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFL 374
++S++SACA + G +H++A+K + + I V +++D+Y KC +E + + F
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 375 TTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGL--TPNQYTYPTILRTCTSLGAL 432
+N+V N ++ Y + + +F++M G TPN T+ ++L C+ GA+
Sbjct: 370 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
Query: 433 SLGEQIHTQL-----------------------GNLNTAQEILRRLPEDDVVS-WTAMIV 468
G +I + G + A E ++++P +S W A+
Sbjct: 430 ENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQN 489
Query: 469 GFVQHG 474
HG
Sbjct: 490 ACRMHG 495
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 9/274 (3%)
Query: 7 QANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMK 66
NS TF L C + L ++HG +L+ GFD + +C+ + Y + S+
Sbjct: 206 HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI 265
Query: 67 IFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGN 126
IF +M + SW L++ +V + L+L+ D V ++ VL AC +G
Sbjct: 266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGM 323
Query: 127 VAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMI 186
++ IH + + + + L+D+Y K G I+ +++ F+ + K+ V+ ++I
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 187 SGFSQNGYEREAILLFCQMHILGTVPTPYAIS--SALSACTKIELFEIGEQ-FHGLIFKW 243
G++ G A+ LF +M G PTP ++ S LSAC++ E G + F + +
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 244 GFS--SETFVCNALVTLYSRSGNLTSAEQIFSKM 275
G +E + C +V + R+G + A + KM
Sbjct: 444 GIEPGAEHYSC--IVDMLGRAGMVERAYEFIKKM 475
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 598 TFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEA--SNSLITLYAKCGSIDDAKREFL 655
G ++ A + ++++ G+ VHA I+KT DS +N LI +Y+K + A+
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLR 66
Query: 656 EMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNE 715
P +N VSW ++I+G +Q+G+ A+ F +M++ V+PN TF A + + L
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 716 GLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLS 773
G + +++ + G + D+ + AR+ +++P E + W +S
Sbjct: 127 G-KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP-ERNLETWNAFIS 182
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/675 (35%), Positives = 380/675 (56%), Gaps = 28/675 (4%)
Query: 321 LVSACASVGAFRTGEQLHSYAIKVGIS---KDIIVEGSMLDLYVKCSDVETAYKFFLTTE 377
L+ CA+ R GE +H++ I S +D S+++LYVKC + A K F
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 378 TENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLT-PNQYTYPTILRTCTSLGALSLGE 436
NVV W M+ Y E ++FK M G + PN++ + ++C++ G + G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 437 QIHTQL-----------------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQH 473
Q H GN A +L LP D+ +++ + G+++
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGN-GEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 474 GMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIG 533
G F E L++ + N+ +N+ + S++ + ++ LN Q+H++ GF+ ++
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 534 NALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQ 593
ALI++Y +CG++ A VF+ A++ ++ + Q E AL +FS+M V
Sbjct: 276 GALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 594 ANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKRE 653
N YTF ++++ A L+ +KQG +H +++K+GY + N+L+ +YAK GSI+DA++
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395
Query: 654 FLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLV 713
F M ++ V+WN MI+G S HG EA+ F++M +PN +TF+GVL ACSH+G V
Sbjct: 396 FSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFV 455
Query: 714 NEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLS 773
+GL YF + ++ + P +HY C+V LL +AG A +F PIE D + WRTLL+
Sbjct: 456 EQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLN 515
Query: 774 ACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKE 833
AC V +N +G+ A + +E P DS YVLLSNI+A + +W+ ++R +M +RGVKKE
Sbjct: 516 ACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE 575
Query: 834 PGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQK 893
PG SWI ++N H F D HP IY + + ++ +GY + D+++EQ+
Sbjct: 576 PGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQR 635
Query: 894 DPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANR 953
+ + HSEKLA+A+GL+ + P+ V KN+R+C+DCH+ IK +SKIS R IV+RD+NR
Sbjct: 636 EDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNR 695
Query: 954 FHHFEGGVCSCRDYW 968
FHHF G CSC DYW
Sbjct: 696 FHHFLDGQCSCCDYW 710
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 205/445 (46%), Gaps = 27/445 (6%)
Query: 152 NPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILG-T 210
N LI+LY K A+K+F+ + ++ VSW AM+ G+ +G++ E + LF M G +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 211 VPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQ 270
P + + +C+ E G+QFHG K+G S FV N LV +YS A +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 271 IFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGA 330
+ + D ++S +SG +CG + L++ K + + +T S + +++
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 331 FRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVA 390
Q+HS ++ G + ++ G+++++Y KC V A + F T +N+ L ++ A
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 391 YGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH----------- 439
Y Q E+ +F +M T+ + PN+YT+ +L + L L G+ +H
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372
Query: 440 -----------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMEN 488
+ G++ A++ + D+V+W MI G HG+ EALE F+ M
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF 432
Query: 489 QGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFS--DDLSIGNALISLYARCGRI 546
G + I F + AC+ I + QG Q + F D+ ++ L ++ G
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQGLHYFNQ-LMKKFDVQPDIQHYTCIVGLLSKAGMF 491
Query: 547 QEAYLVFNKIDAK-DNISWNGLISG 570
++A + D ++W L++
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 226/500 (45%), Gaps = 34/500 (6%)
Query: 213 TPYAI---SSALSACTKIELFEIGEQFHGLIFKWGFSS---ETFVCNALVTLYSRSGNLT 266
TP+ I + L C IGE H + SS + + N+L+ LY +
Sbjct: 27 TPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETV 86
Query: 267 SAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDC-LKPDCVTVASLVSAC 325
A ++F M +R+ V++ +++ G G+ + L+LF+ M +P+ + +C
Sbjct: 87 RARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSC 146
Query: 326 ASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWN 385
++ G G+Q H +K G+ V +++ +Y CS A + ++ +++
Sbjct: 147 SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206
Query: 386 VMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL--- 442
L Y + E + ++ E N TY + LR ++L L+L Q+H+++
Sbjct: 207 SALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRF 266
Query: 443 -------------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELF 483
G + AQ + ++ T ++ + Q F EAL LF
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLF 326
Query: 484 EEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARC 543
+M+ + + + F+ +++ A + L QG +H SG+ + + +GNAL+++YA+
Sbjct: 327 SKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 544 GRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVV 603
G I++A F+ + +D ++WN +ISG + G AL+ F +M G N TF V+
Sbjct: 387 GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVL 446
Query: 604 SAAANLANIKQGKQVHAMIIKTGYDSETEASN--SLITLYAKCGSIDDAKREFLEMP-EK 660
A +++ ++QG ++K +D + + + ++ L +K G DA+ P E
Sbjct: 447 QACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW 505
Query: 661 NEVSWNAMITG-FSQHGYAL 679
+ V+W ++ + + Y L
Sbjct: 506 DVVAWRTLLNACYVRRNYRL 525
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/563 (22%), Positives = 251/563 (44%), Gaps = 27/563 (4%)
Query: 16 LLEGCLSYGSLLEAKKIHGKIL-----KLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDD 70
LL+ C + L + IH ++ D Q+ + N+Y+ + A K+FD
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI--NSLINLYVKCRETVRARKLFDL 94
Query: 71 MSKRTVFSWNKLISGFVAKKLSGRVLGLFLQM-IDDDVIPNEATFVGVLRACIGSGNVAV 129
M +R V SW ++ G+ VL LF M + PNE V ++C SG +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR--I 152
Query: 130 QCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGF 189
+ Q HG + +G + N L+ +Y+ A +V ++L + D + + +SG+
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 190 SQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSET 249
+ G +E + + + V S+L + + + Q H + ++GF++E
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 250 FVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLD 309
C AL+ +Y + G + A+++F ++ +++ Q ++AL LF KM
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 310 CLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETA 369
+ P+ T A L+++ A + + G+ LH +K G ++V +++++Y K +E A
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 370 YKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSL 429
K F ++V WN M+ E+ + F +M G PN+ T+ +L+ C+ +
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 430 GALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQ 489
G + G QL Q D+ +T ++ + GMF +A + M
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQP--------DIQHYTCIVGLLSKAGMFKDAEDF---MRTA 501
Query: 490 GIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARC----GR 545
I+ D + + + ++AC + G+++ A+ I + +D + L +++A+ G
Sbjct: 502 PIEWDVVAWRTLLNACYVRRNYRLGKKV-AEYAIEKYPNDSGVYVLLSNIHAKSREWEGV 560
Query: 546 IQEAYLVFNK-IDAKDNISWNGL 567
+ L+ N+ + + +SW G+
Sbjct: 561 AKVRSLMNNRGVKKEPGVSWIGI 583
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M+ + + N TF LL L + +HG +LK G+ ++ + N+Y SG
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
++ A K F M+ R + +WN +ISG L L F +MI IPN TF+GVL+A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448
Query: 121 C--IGSGNVAVQCVNQIHGLIISHGFGGSPLISNP--LIDLYAKNGFIDSAKKVFNNLCF 176
C IG + NQ + F P I + ++ L +K G A+
Sbjct: 449 CSHIGFVEQGLHYFNQ-----LMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPI 503
Query: 177 K-DSVSWVAMISG 188
+ D V+W +++
Sbjct: 504 EWDVVAWRTLLNA 516
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/512 (43%), Positives = 326/512 (63%), Gaps = 2/512 (0%)
Query: 459 DVVSWTAMIVGFVQHGMFGEALELFEEMENQG-IQSDNIGFSSAISACAGIQALNQGRQI 517
+V W +I G+ + G A L+ EM G ++ D + I A + + G I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 518 HAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYC 577
H+ SGF + + N+L+ LYA CG + AY VF+K+ KD ++WN +I+GFA++G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 578 EGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSL 637
E AL ++++M G++ + +T S++SA A + + GK+VH +IK G +SN L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 638 ITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHD-VMPN 696
+ LYA+CG +++AK F EM +KN VSW ++I G + +G+ EAI LF+ M+ + ++P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 697 HVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFT 756
+TFVG+L ACSH G+V EG YF M EY + P+ EH+ C+VDLL RAG + +A E+
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 757 EQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWD 816
+ MP++P+ ++WRTLL AC VH + ++ E+A +L+LEP S YVLLSN+YA+ +W
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 817 CRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIG 876
+IR+ M GVKK PG S +EV N +H F +GD+ HP +D IY L + R+ G
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Query: 877 YVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIK 936
YV +++ D+E+E+K+ V HSEK+AIAF L+S + PI V+KNLRVC DCH IK
Sbjct: 504 YVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIK 563
Query: 937 FVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
VSK+ NR IVVRD +RFHHF+ G CSC+DYW
Sbjct: 564 LVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 203/394 (51%), Gaps = 33/394 (8%)
Query: 335 EQLHSYAIKVGISKDIIVEGSMLDLYV----KCSDVETAYKFFLTTETE-NVVLWNVMLV 389
Q+H+++I+ G+S G L Y+ + A+K F E NV +WN ++
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 390 AYGQLNDLSESFQIFKQMQTEGLT-PNQYTYPTILRTCTSLGALSLGEQIHTQL------ 442
Y ++ + +F ++++M+ GL P+ +TYP +++ T++ + LGE IH+ +
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 443 ----------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEM 486
G++ +A ++ ++PE D+V+W ++I GF ++G EAL L+ EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 487 ENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRI 546
++GI+ D S +SACA I AL G+++H G + +L N L+ LYARCGR+
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 547 QEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQV-GVQANLYTFGSVVSA 605
+EA +F+++ K+++SW LI G A +G+ + A+++F M G+ TF ++ A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 606 AANLANIKQG-KQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMP-EKNEV 663
++ +K+G + M + + E ++ L A+ G + A MP + N V
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 664 SWNAMITGFSQHGYALEAINLFEKMKKHDVMPNH 697
W ++ + HG + + F +++ + PNH
Sbjct: 394 IWRTLLGACTVHGDS--DLAEFARIQILQLEPNH 425
Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 191/383 (49%), Gaps = 35/383 (9%)
Query: 125 GNVAVQCVNQIHGLIISHGFG------GSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKD 178
G ++ + QIH I HG G LI L+ L + + A KVF+ +
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFY-LVSLPSPPP-MSYAHKVFSKIEKPI 83
Query: 179 SV-SWVAMISGFSQNGYEREAILLFCQMHILGTV-PTPYAISSALSACTKIELFEIGEQF 236
+V W +I G+++ G A L+ +M + G V P + + A T + +GE
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 237 HGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYS 296
H ++ + GF S +V N+L+ LY+ G++ SA ++F KM ++D V +NS+I+G A+ G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 297 DKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSM 356
++AL L+ +M +KPD T+ SL+SACA +GA G+++H Y IKVG+++++ +
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 357 LDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQ-TEGLTPN 415
LDLY +C VE A F +N V W ++V E+ ++FK M+ TEGL P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 416 QYTYPTILRTCTSLGALSLGEQIHTQL-----------------------GNLNTAQEIL 452
+ T+ IL C+ G + G + ++ G + A E +
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 453 RRLP-EDDVVSWTAMIVGFVQHG 474
+ +P + +VV W ++ HG
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHG 406
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 159/314 (50%), Gaps = 11/314 (3%)
Query: 6 IQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAM 65
++ ++ T+ +L++ + + + IH +++ GF + + ++Y GD+ SA
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 66 KIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSG 125
K+FD M ++ + +WN +I+GF L L+ +M + P+ T V +L AC G
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 126 NVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAM 185
A+ ++H +I G + SN L+DLYA+ G ++ AK +F+ + K+SVSW ++
Sbjct: 237 --ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294
Query: 186 ISGFSQNGYEREAILLFCQMH-ILGTVPTPYAISSALSACTKIELFEIGEQFHGLI---F 241
I G + NG+ +EAI LF M G +P L AC+ + + G ++ + +
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354
Query: 242 KWGFSSETFVCNALVTLYSRSGNLTSA-EQIFSKMQQRDGVTYNSLISGLAQCGYSDKAL 300
K E F C +V L +R+G + A E I S Q + V + +L+ G SD L
Sbjct: 355 KIEPRIEHFGC--MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--L 410
Query: 301 ELFEKMQLDCLKPD 314
F ++Q+ L+P+
Sbjct: 411 AEFARIQILQLEPN 424
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M +GI+ + T V LL C G+L K++H ++K+G + ++Y G
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDD-VIPNEATFVGVLR 119
++ A +FD+M + SW LI G + LF M + ++P E TFVG+L
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 120 ACIGSGNV 127
AC G V
Sbjct: 333 ACSHCGMV 340
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 267/812 (32%), Positives = 430/812 (52%), Gaps = 62/812 (7%)
Query: 216 AISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSG---NLTSAEQIF 272
A S+L C I+ ++ FH + K G ++ LV G +L+ A+++F
Sbjct: 34 ATPSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVF 90
Query: 273 SKMQQRDGV-TYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAF 331
+ YNSLI G A G ++A+ LF +M + PD T +SACA A
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 332 RTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAY 391
G Q+H +K+G +KD+ V+ S++ Y +C ++++A K F NVV W M+ Y
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 392 GQLNDLSESFQIFKQM-QTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGN------ 444
+ + ++ +F +M + E +TPN T ++ C L L GE+++ + N
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 445 ----------------LNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMEN 488
++ A+ + ++ AM +V+ G+ EAL +F M +
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 489 QGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQE 548
G++ D I SAIS+C+ ++ + G+ H +GF +I NALI +Y +C R
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 549 AYLVFNK---------------------IDA----------KDNISWNGLISGFAQSGYC 577
A+ +F++ +DA K+ +SWN +ISG Q
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 578 EGALQVFSQM-TQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNS 636
E A++VF M +Q GV A+ T S+ SA +L + K ++ I K G + +
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 510
Query: 637 LITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPN 696
L+ ++++CG + A F + ++ +W A I + G A AI LF+ M + + P+
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 697 HVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFT 756
V FVG L+ACSH GLV +G F SM +G+ P+ HY C+VDLLGRAG L A +
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 757 EQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWD 816
E MP+EP+ ++W +LL+ACRV N+E+ YAA + L PE + +YVLLSN+YA+AG+W+
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 817 CRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIG 876
++R MK++G++K PG S I+++ H F GD HP I L +++R + +G
Sbjct: 691 DMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLG 750
Query: 877 YVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIK 936
+V ++ D+++++K + HSEKLA+A+GL+S + I ++KNLRVC+DCH++ K
Sbjct: 751 HVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAK 810
Query: 937 FVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
F SK+ NR I++RD NRFH+ G CSC D+W
Sbjct: 811 FASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 263/538 (48%), Gaps = 46/538 (8%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M GI + TF + L C + +IHG I+K+G+ + + + + Y G+
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMI-DDDVIPNEATFVGVLR 119
LDSA K+FD+MS+R V SW +I G+ + + + LF +M+ D++V PN T V V+
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 120 ACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS 179
AC + ++ +++ I + G + L+ + L+D+Y K ID AK++F+ +
Sbjct: 245 ACAKLED--LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGL 239
AM S + + G REA+ +F M G P ++ SA+S+C+++ G+ HG
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 240 IFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKA 299
+ + GF S +CNAL+ +Y + +A +IF +M + VT+NS+++G + G D A
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 300 LELFEKM-------------------------QLDC-------LKPDCVTVASLVSACAS 327
E FE M ++ C + D VT+ S+ SAC
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 328 VGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVM 387
+GA + ++ Y K GI D+ + +++D++ +C D E+A F + +V W
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 388 LVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNT 447
+ A + + ++F M +GL P+ + L C+ G + G++I + L+
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 448 AQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISAC 505
PED V + M+ + G+ EA++L E+M ++ +++ ++S ++AC
Sbjct: 603 VS------PED--VHYGCMVDLLGRAGLLEEAVQLIEDMP---MEPNDVIWNSLLAAC 649
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/618 (26%), Positives = 290/618 (46%), Gaps = 71/618 (11%)
Query: 28 EAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDS---AMKIFDDM-SKRTVFSWNKLI 83
E K H + K G D + K G +S A ++F++ S T F +N LI
Sbjct: 47 ELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLI 106
Query: 84 SGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGS---GNVAVQCVNQIHGLII 140
G+ + L + LFL+M++ + P++ TF L AC S GN QIHGLI+
Sbjct: 107 RGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGI-----QIHGLIV 161
Query: 141 SHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAIL 200
G+ + N L+ YA+ G +DSA+KVF+ + ++ VSW +MI G+++ + ++A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 201 LFCQM-HILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLY 259
LF +M P + +SAC K+E E GE+ + I G + +ALV +Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 260 SRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVA 319
+ + A+++F + + N++ S + G + +AL +F M ++PD +++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 320 SLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETE 379
S +S+C+ + G+ H Y ++ G + +++D+Y+KC +TA++ F +
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 380 NVVLWNVMLVAY---GQLNDLSESF----------------------------QIFKQMQ 408
VV WN ++ Y G+++ E+F ++F MQ
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 409 T-EGLTPNQYTYPTILRTCTSLGALSLGEQIH----------------------TQLGNL 445
+ EG+ + T +I C LGAL L + I+ ++ G+
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 446 NTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISAC 505
+A I L DV +WTA I G A+ELF++M QG++ D + F A++AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 506 AGIQALNQGRQI-HAQSYISGFS-DDLSIGNALISLYARCGRIQEAYLVFNKIDAKDN-I 562
+ + QG++I ++ + G S +D+ G ++ L R G ++EA + + + N +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 563 SWNGLISGFAQSGYCEGA 580
WN L++ G E A
Sbjct: 641 IWNSLLAACRVQGNVEMA 658
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/818 (31%), Positives = 440/818 (53%), Gaps = 33/818 (4%)
Query: 47 LCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDD 106
L + Y SG + A K+FD + + V S N +ISG+ +L L F +M
Sbjct: 86 LTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLG 145
Query: 107 VIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDS 166
NE ++ V+ AC S A + I G+ ++ + LID+++KN +
Sbjct: 146 FEANEISYGSVISAC--SALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 167 AKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTK 226
A KVF + + W +I+G +N LF +M + P Y SS L+AC
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 227 IELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSL 286
+E G+ + K G + + FVC A+V LY++ G++ A ++FS++ V++ +
Sbjct: 264 LEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 287 ISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGI 346
+SG + + ALE+F++M+ ++ + TV S++SAC Q+H++ K G
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 347 SKDIIVEGSMLDLYVKCSDVETAYKFFLT---TETENVVLWNVMLVAYGQLNDLSESFQI 403
D V +++ +Y K D++ + + F + +N+V NVM+ ++ Q ++ ++
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRL 440
Query: 404 FKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH----------------------TQ 441
F +M EGL ++++ ++L L L+LG+Q+H ++
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 442 LGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSA 501
G+L + ++ + +P D W +MI GF ++G EA+ LF EM + G D ++
Sbjct: 498 CGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 502 ISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDN 561
++ C+ +L +G++IH + +G + +G+AL+++Y++CG ++ A V++++ D
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Query: 562 ISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAM 621
+S + LISG++Q G + +F M G + + S++ AAA G QVHA
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 622 IIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEA 681
I K G +E +SL+T+Y+K GSIDD + F ++ + ++W A+I ++QHG A EA
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 682 INLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVD 741
+ ++ MK+ P+ VTFVGVLSACSH GLV E + SM +YG+ P+ HY C+VD
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVD 797
Query: 742 LLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSAT 801
LGR+G L A F M I+PDA+VW TLL+AC++H +E+G+ AA +ELEP D+
Sbjct: 798 ALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGA 857
Query: 802 YVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWI 839
Y+ LSNI A G+WD ++ R++MK GV+KEPG S +
Sbjct: 858 YISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/702 (26%), Positives = 345/702 (49%), Gaps = 33/702 (4%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M G +AN ++ ++ C + + L ++ + +K+G+ +V+ +++ +
Sbjct: 141 MHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
+ A K+F D V+ WN +I+G + + G V LF +M P+ T+ VL A
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
C + V + +I G + ++DLYAK G + A +VF+ + V
Sbjct: 261 CASLEKLRFGKV--VQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVV 317
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
SW M+SG++++ A+ +F +M G ++S +SAC + + Q H +
Sbjct: 318 SWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWV 377
Query: 241 FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ--QRDGVTYNSLISGLAQCGYSDK 298
FK GF ++ V AL+++YS+SG++ +EQ+F + QR + N +I+ +Q K
Sbjct: 378 FKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGK 436
Query: 299 ALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLD 358
A+ LF +M + L+ D +V SL+S + G+Q+H Y +K G+ D+ V S+
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFT 493
Query: 359 LYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYT 418
LY KC +E +YK F ++ W M+ + + L E+ +F +M +G +P++ T
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 419 YPTILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLP 456
+L C+S +L G++IH ++ G+L A+++ RLP
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 457 EDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ 516
E D VS +++I G+ QHG+ + LF +M G D+ SS + A A + G Q
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQ 673
Query: 517 IHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGY 576
+HA G + S+G++L+++Y++ G I + F++I+ D I+W LI+ +AQ G
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 577 CEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGK-QVHAMIIKTGYDSETEASN 635
ALQV++ M + G + + TF V+SA ++ +++ +++M+ G + E
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 636 SLITLYAKCGSIDDAKREFLEMPEK-NEVSWNAMITGFSQHG 676
++ + G + +A+ M K + + W ++ HG
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHG 835
Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/569 (29%), Positives = 297/569 (52%), Gaps = 29/569 (5%)
Query: 239 LIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDK 298
L+ ++ + F+ +L++ YS SG++ A ++F + Q D V+ N +ISG Q ++
Sbjct: 74 LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEE 133
Query: 299 ALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLD 358
+L F KM + + ++ S++SAC+++ A E + + IK+G +VE +++D
Sbjct: 134 SLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALID 193
Query: 359 LYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYT 418
++ K E AYK F + + NV WN ++ + + F +F +M P+ YT
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 419 YPTILRTCTSLGALSLGE---------------------QIHTQLGNLNTAQEILRRLPE 457
Y ++L C SL L G+ ++ + G++ A E+ R+P
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 458 DDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQI 517
VVSWT M+ G+ + ALE+F+EM + G++ +N +S ISAC + + Q+
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 518 HAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKID--AKDNISWNGLISGFAQSG 575
HA + SGF D S+ ALIS+Y++ G I + VF +D + NI N +I+ F+QS
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSK 432
Query: 576 YCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASN 635
A+++F++M Q G++ + ++ S++S L + GKQVH +K+G + +
Sbjct: 433 KPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGS 489
Query: 636 SLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMP 695
SL TLY+KCGS++++ + F +P K+ W +MI+GF+++GY EAI LF +M P
Sbjct: 490 SLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSP 549
Query: 696 NHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREF 755
+ T VL+ CS + G + + G+ + + +V++ + G L AR+
Sbjct: 550 DESTLAAVLTVCSSHPSLPRG-KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 756 TEQMPIEPDAMVWRTLLSACRVHKNMEIG 784
+++P E D + +L+S H ++ G
Sbjct: 609 YDRLP-ELDPVSCSSLISGYSQHGLIQDG 636
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/735 (32%), Positives = 406/735 (55%), Gaps = 29/735 (3%)
Query: 259 YSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTV 318
++ S + A Q+F +M + D +N +I G CG +A++ + +M +K D T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 319 ASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTET 378
++ + A + + G+++H+ IK+G D+ V S++ LY+K A K F
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 379 ENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQI 438
++V WN M+ Y L D S +FK+M G P++++ + L C+ + + +G++I
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 439 H-----------------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGM 475
H ++ G ++ A+ I + + ++V+W MI + ++G
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 476 FGEALELFEEM-ENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGN 534
+A F++M E G+Q D I + + A A+ +GR IH + GF + +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLET 369
Query: 535 ALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQA 594
ALI +Y CG+++ A ++F+++ K+ ISWN +I+ + Q+G AL++F ++ +
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 595 NLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREF 654
+ T S++ A A ++ +G+++HA I+K+ Y S T NSL+ +YA CG ++DA++ F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 655 LEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVN 714
+ K+ VSWN++I ++ HG+ ++ LF +M V PN TF +L+ACS G+V+
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 715 EGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSA 774
EG YFESM EYG+ P EHY C++DL+GR G S A+ F E+MP P A +W +LL+A
Sbjct: 550 EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA 609
Query: 775 CRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEP 834
R HK++ I E+AA + ++E +++ YVLL N+YA AG+W+ ++I+ +M+ +G+ +
Sbjct: 610 SRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTS 669
Query: 835 GQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIG-YVQGRYSLWSDLEQEQK 893
+S +E K H F GDR H +KIY+ L ++R V E YV L + + +
Sbjct: 670 SRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSR 729
Query: 894 DPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANR 953
HS +LA FGL+S + V N R+C CH +++ S+++ R IVV D+
Sbjct: 730 SNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKI 789
Query: 954 FHHFEGGVCSCRDYW 968
FHHF G CSC +YW
Sbjct: 790 FHHFSNGRCSCGNYW 804
Score = 256 bits (655), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 284/547 (51%), Gaps = 27/547 (4%)
Query: 138 LIISHGFGGSPLISNPLIDLYAKNGFIDS-----AKKVFNNLCFKDSVSWVAMISGFSQN 192
L++ + + +++P + A GF DS A ++F+ + D+ W MI GF+
Sbjct: 50 LVLRDRYKVTKQVNDPALT-RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSC 108
Query: 193 GYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVC 252
G EA+ + +M G + + + I E G++ H ++ K GF S+ +VC
Sbjct: 109 GLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVC 168
Query: 253 NALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLK 312
N+L++LY + G AE++F +M +RD V++NS+ISG G +L LF++M K
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 313 PDCVTVASLVSACASVGAFRTGEQLHSYAIKVGI-SKDIIVEGSMLDLYVKCSDVETAYK 371
PD + S + AC+ V + + G+++H +A++ I + D++V S+LD+Y K +V A +
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 372 FFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQM-QTEGLTPNQYTYPTILRTCTSLG 430
F N+V WNVM+ Y + ++++F F++M + GL P+ T +L L
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 431 -------ALSLGEQIHTQL-----------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQ 472
A+ G H L G L +A+ I R+ E +V+SW ++I +VQ
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 473 HGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSI 532
+G ALELF+E+ + + D+ +S + A A +L++GR+IHA S + + I
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 533 GNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGV 592
N+L+ +YA CG +++A FN I KD +SWN +I +A G+ ++ +FS+M V
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 593 QANLYTFGSVVSAAANLANIKQG-KQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAK 651
N TF S+++A + + +G + +M + G D E ++ L + G+ AK
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 652 REFLEMP 658
R EMP
Sbjct: 589 RFLEEMP 595
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 227/433 (52%), Gaps = 8/433 (1%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSA 64
G++A++ T+ ++++ SL E KKIH ++KLGF + +C+ ++Y+ G A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 65 MKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGS 124
K+F++M +R + SWN +ISG++A L LF +M+ P+ + + L AC S
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC--S 242
Query: 125 GNVAVQCVNQIH-GLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWV 183
+ + +IH + S G ++ ++D+Y+K G + A+++FN + ++ V+W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 184 AMISGFSQNGYEREAILLFCQM-HILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFK 242
MI +++NG +A L F +M G P + L A +E G HG +
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMR 358
Query: 243 WGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALEL 302
GF + AL+ +Y G L SAE IF +M +++ +++NS+I+ Q G + ALEL
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 303 FEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVK 362
F+++ L PD T+AS++ A A + G ++H+Y +K + I+ S++ +Y
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 363 CSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTI 422
C D+E A K F ++VV WN +++AY S +F +M + PN+ T+ ++
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538
Query: 423 LRTCTSLGALSLG 435
L C+ G + G
Sbjct: 539 LAACSISGMVDEG 551
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 158/629 (25%), Positives = 291/629 (46%), Gaps = 74/629 (11%)
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
++ A+++FD+M+K F WN +I GF + L + + +M+ V + T+ V+++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
G +++ +IH ++I GF + N LI LY K G A+KVF + +D V
Sbjct: 140 VAGIS--SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIV 197
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
SW +MISG+ G +++LF +M G P ++ SAL AC+ + ++G++ H
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 241 FKWGFSS-ETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKA 299
+ + + V +++ +YS+ G ++ AE+IF+ M QR+ V +N +I A+ G A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 300 LELFEKM-QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLD 358
F+KM + + L+PD +T +L+ A A G +H YA++ G +++E +++D
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALID 373
Query: 359 LYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYT 418
+Y +C +++A F +NV+ WN ++ AY Q + ++F+++ L P+ T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 419 YPTILRTCTSLGALSLGEQIHTQL----------------------GNLNTAQEILRRLP 456
+IL +LS G +IH + G+L A++ +
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 457 EDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ 516
DVVSW ++I+ + HG ++ LF EM + + F+S ++AC+
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS---------- 543
Query: 517 IHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNIS-----WNGLISGF 571
ISG D E + F + + I + ++
Sbjct: 544 ------ISGMVD-------------------EGWEYFESMKREYGIDPGIEHYGCMLDLI 578
Query: 572 AQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSET 631
++G A + +M V +GS+++A+ N +I + I K +D+ T
Sbjct: 579 GRTGNFSAAKRFLEEMPFVPTAR---IWGSLLNASRNHKDITIAEFAAEQIFKMEHDN-T 634
Query: 632 EASNSLITLYAKCGSIDDAKREFLEMPEK 660
L+ +YA+ G +D R L M K
Sbjct: 635 GCYVLLLNMYAEAGRWEDVNRIKLLMESK 663
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 187/387 (48%), Gaps = 20/387 (5%)
Query: 30 KKIHGKILKLGFD-GEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVA 88
K+IH ++ + G+ ++ ++Y G++ A +IF+ M +R + +WN +I +
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 89 KKLSGRVLGLFL---QMIDDDVI-PNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGF 144
+GRV FL +M + + + P+ T + +L A A+ IHG + GF
Sbjct: 311 ---NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS------AILEGRTIHGYAMRRGF 361
Query: 145 GGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQ 204
++ LID+Y + G + SA+ +F+ + K+ +SW ++I+ + QNG A+ LF +
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 205 MHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGN 264
+ VP I+S L A + G + H I K + S T + N+LV +Y+ G+
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 265 LTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSA 324
L A + F+ + +D V++NS+I A G+ ++ LF +M + P+ T ASL++A
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Query: 325 CASVGAFRTG-EQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTE-TENVV 382
C+ G G E S + GI I G MLDL + + A +F
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601
Query: 383 LWNVMLVAYGQLNDLS----ESFQIFK 405
+W +L A D++ + QIFK
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFK 628
Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 171/344 (49%), Gaps = 39/344 (11%)
Query: 464 TAMIVGFVQHGMFGEALELFEEMEN-------------------------------QGIQ 492
T + GF + +AL+LF+EM G++
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 493 SDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLV 552
+D + I + AGI +L +G++IHA GF D+ + N+LISLY + G +A V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 553 FNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANI 612
F ++ +D +SWN +ISG+ G +L +F +M + G + + ++ S + A +++ +
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 613 KQGKQVHAMIIKTGYDS-ETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITG 671
K GK++H +++ ++ + S++ +Y+K G + A+R F M ++N V+WN MI
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 672 FSQHGYALEAINLFEKMKKHD-VMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLV 730
++++G +A F+KM + + + P+ +T + +L A + + EG R + G +
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEG-RTIHGYAMRRGFL 362
Query: 731 PKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSA 774
P ++D+ G G L A ++M E + + W ++++A
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAA 405
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/721 (34%), Positives = 388/721 (53%), Gaps = 36/721 (4%)
Query: 274 KMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRT 333
K+ + G N + L++ ++A E ++M + + L AC + +
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 334 GEQLHSYAIKVGI-SKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYG 392
G LH +++GI + ++++ +L +Y +C +E A K F N V M+ AY
Sbjct: 102 GRLLHD-RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA 160
Query: 393 QLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL---------- 442
+ L ++ +F M G P Y T+L++ + AL G QIH +
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTS 220
Query: 443 ------------GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQG 490
G L A+ + ++ V+ T ++VG+ Q G +AL+LF ++ +G
Sbjct: 221 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG 280
Query: 491 IQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAY 550
++ D+ FS + ACA ++ LN G+QIHA G ++S+G L+ Y +C + A
Sbjct: 281 VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESAC 340
Query: 551 LVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQA-NLYTFGSVVSAAANL 609
F +I +++SW+ +ISG+ Q E A++ F + N +T+ S+ A + L
Sbjct: 341 RAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL 400
Query: 610 ANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMI 669
A+ G QVHA IK ++LIT+Y+KCG +DDA F M + V+W A I
Sbjct: 401 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFI 460
Query: 670 TGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGL 729
+G + +G A EA+ LFEKM + PN VTF+ VL+ACSH GLV +G ++M +Y +
Sbjct: 461 SGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNV 520
Query: 730 VPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAAN 789
P +HY C++D+ R+G L A +F + MP EPDAM W+ LS C HKN+E+GE A
Sbjct: 521 APTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGE 580
Query: 790 HLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFF 849
L +L+PED+A YVL N+Y AGKW+ ++ ++M +R +KKE SWI+ K IH F
Sbjct: 581 ELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFI 640
Query: 850 VGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFG 909
VGD+ HP +IY+ L + G+++G + E+ ++ + HSE+LAIAFG
Sbjct: 641 VGDKHHPQTQEIYEKLKEFD------GFMEGDMFQCNMTERREQ---LLDHSERLAIAFG 691
Query: 910 LLSL--SDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDY 967
L+S+ + PI V KNLR C DCH + K VS ++ IV+RD+ RFHHF+ G CSC DY
Sbjct: 692 LISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDY 751
Query: 968 W 968
W
Sbjct: 752 W 752
Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/552 (24%), Positives = 263/552 (47%), Gaps = 19/552 (3%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDK-FFNIYLTSG 59
M++ G+ +S ++ L E C SL + +H + +++G + VL +Y
Sbjct: 74 MDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNCVLQMYCECR 132
Query: 60 DLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLR 119
L+ A K+FD+MS+ S +IS + + + + +GLF M+ P + + +L+
Sbjct: 133 SLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLK 192
Query: 120 ACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS 179
+ + A+ QIH +I G + I ++++Y K G++ AK+VF+ + K
Sbjct: 193 SLVNPR--ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGL 239
V+ ++ G++Q G R+A+ LF + G + S L AC +E +G+Q H
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 240 IFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKA 299
+ K G SE V LV Y + + SA + F ++++ + V+++++ISG Q ++A
Sbjct: 311 VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 300 LELFEKMQ-LDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLD 358
++ F+ ++ + + T S+ AC+ + G Q+H+ AIK + E +++
Sbjct: 371 VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT 430
Query: 359 LYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYT 418
+Y KC ++ A + F + + ++V W + + + SE+ ++F++M + G+ PN T
Sbjct: 431 MYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVT 490
Query: 419 YPTILRTCTSLGALSLGEQ-IHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFG 477
+ +L C+ G + G+ + T L N A I + MI + + G+
Sbjct: 491 FIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH---------YDCMIDIYARSGLLD 541
Query: 478 EALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALI 537
EAL+ M+N + D + + +S C + L G +I + +D +
Sbjct: 542 EALKF---MKNMPFEPDAMSWKCFLSGCWTHKNLELG-EIAGEELRQLDPEDTAGYVLPF 597
Query: 538 SLYARCGRIQEA 549
+LY G+ +EA
Sbjct: 598 NLYTWAGKWEEA 609
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 223/450 (49%), Gaps = 27/450 (6%)
Query: 147 SPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMH 206
S L+ N ++ +Y + ++ A K+F+ + ++VS MIS +++ G +A+ LF M
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 207 ILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLT 266
G P ++ L + + G Q H + + G S T + +V +Y + G L
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 267 SAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACA 326
A+++F +M + V L+ G Q G + AL+LF + + ++ D + ++ ACA
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 327 SVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNV 386
S+ G+Q+H+ K+G+ ++ V ++D Y+KCS E+A + F N V W+
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356
Query: 387 MLVAYGQLNDLSESFQIFKQMQTEGLTP-NQYTYPTILRTCTSLGALSLGEQIH------ 439
++ Y Q++ E+ + FK ++++ + N +TY +I + C+ L ++G Q+H
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416
Query: 440 ----------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELF 483
++ G L+ A E+ + D+V+WTA I G +G EAL LF
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 484 EEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIG--NALISLYA 541
E+M + G++ +++ F + ++AC+ + QG+ + + ++ +I + +I +YA
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHC-LDTMLRKYNVAPTIDHYDCMIDIYA 535
Query: 542 RCGRIQEAYLVFNKID-AKDNISWNGLISG 570
R G + EA + D +SW +SG
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/669 (35%), Positives = 364/669 (54%), Gaps = 50/669 (7%)
Query: 301 ELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLY 360
E F++ +L+ + + +C + + +G+QLH + G S D + ++ +Y
Sbjct: 31 EAFQRFRLNIF-TNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMY 89
Query: 361 VKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYP 420
K D +A + +N + N+++ Y
Sbjct: 90 SKLGDFPSAVAVYGRMRKKNYMSSNILINGY----------------------------- 120
Query: 421 TILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEAL 480
+ G+L A+++ +P+ + +W AMI G +Q E L
Sbjct: 121 -------------------VRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGL 161
Query: 481 ELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLY 540
LF EM G D S S AG+++++ G+QIH + G DL + ++L +Y
Sbjct: 162 SLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY 221
Query: 541 ARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFG 600
R G++Q+ +V + ++ ++WN LI G AQ+G E L ++ M G + N TF
Sbjct: 222 MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFV 281
Query: 601 SVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEK 660
+V+S+ ++LA QG+Q+HA IK G S +SLI++Y+KCG + DA + F E ++
Sbjct: 282 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 341
Query: 661 NEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMP-NHVTFVGVLSACSHVGLVNEGLRY 719
+EV W++MI+ + HG EAI LF M + M N V F+ +L ACSH GL ++GL
Sbjct: 342 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL 401
Query: 720 FESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHK 779
F+ M +YG P +HY CVVDLLGRAGCL +A MPI+ D ++W+TLLSAC +HK
Sbjct: 402 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 461
Query: 780 NMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWI 839
N E+ + +L+++P DSA YVLL+N++A+A +W ++R+ M+D+ VKKE G SW
Sbjct: 462 NAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWF 521
Query: 840 EVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYI 899
E K +H F +GDR + +IY YL L + GY S+ D+++E+K+ +
Sbjct: 522 EHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQ 581
Query: 900 HSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEG 959
HSEKLA+AF L+ L + PI +IKNLRVC+DCH K++S I NR I +RD +RFHHF
Sbjct: 582 HSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFIN 641
Query: 960 GVCSCRDYW 968
G CSC DYW
Sbjct: 642 GKCSCGDYW 650
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 211/472 (44%), Gaps = 68/472 (14%)
Query: 179 SVSWVAMISGFSQNGYEREAILLFCQMHILGTVP--TPYAISSALSACTKIELFEIGEQF 236
SV I+ G REA F +++I TP+ + +CT + G+Q
Sbjct: 13 SVDPATAIATLCSKGNLREAFQRF-RLNIFTNTSLFTPF-----IQSCTTRQSLPSGKQL 66
Query: 237 HGLIFKWGFSSETFVCNALVTLYS-------------------------------RSGNL 265
H L+ GFSS+ F+CN L+++YS R+G+L
Sbjct: 67 HCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDL 126
Query: 266 TSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSAC 325
+A ++F +M R T+N++I+GL Q ++++ L LF +M PD T+ S+ S
Sbjct: 127 VNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGS 186
Query: 326 ASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWN 385
A + + G+Q+H Y IK G+ D++V S+ +Y++ ++ + N+V WN
Sbjct: 187 AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWN 246
Query: 386 VMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH------ 439
+++ Q ++K M+ G PN+ T+ T+L +C+ L G+QIH
Sbjct: 247 TLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI 306
Query: 440 ----------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELF 483
++ G L A + ++D V W++MI + HG EA+ELF
Sbjct: 307 GASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELF 366
Query: 484 EEM-ENQGIQSDNIGFSSAISACAGIQALNQGRQIH---AQSYISGFSDDLSIGNALISL 539
M E ++ + + F + + AC+ ++G ++ + Y GF L ++ L
Sbjct: 367 NTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKY--GFKPGLKHYTCVVDL 424
Query: 540 YARCGRIQEAYLVFNKIDAK-DNISWNGLISGFAQSGYCEGALQVFSQMTQV 590
R G + +A + + K D + W L+S E A +VF ++ Q+
Sbjct: 425 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 476
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 202/437 (46%), Gaps = 58/437 (13%)
Query: 106 DVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAK----- 160
++ N + F +++C + ++ Q+H L++ GF I N L+ +Y+K
Sbjct: 39 NIFTNTSLFTPFIQSC--TTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFP 96
Query: 161 ---------------------NGFIDS-----AKKVFNNLCFKDSVSWVAMISGFSQNGY 194
NG++ + A+KVF+ + + +W AMI+G Q +
Sbjct: 97 SAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 156
Query: 195 EREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNA 254
E + LF +MH LG P Y + S S + IG+Q HG K+G + V ++
Sbjct: 157 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 216
Query: 255 LVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPD 314
L +Y R+G L E + M R+ V +N+LI G AQ G + L L++ M++ +P+
Sbjct: 217 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 276
Query: 315 CVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFL 374
+T +++S+C+ + G+Q+H+ AIK+G S + V S++ +Y KC + A K F
Sbjct: 277 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 336
Query: 375 TTETENVVLWNVMLVAYGQLNDLSESFQIFKQM-QTEGLTPNQYTYPTILRTCTSLGALS 433
E E+ V+W+ M+ AYG E+ ++F M + + N+ + +L C+ G
Sbjct: 337 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 396
Query: 434 LGEQIHTQL-----------------------GNLNTAQEILRRLP-EDDVVSWTAMIVG 469
G ++ + G L+ A+ I+R +P + D+V W ++
Sbjct: 397 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
Query: 470 FVQHGMFGEALELFEEM 486
H A +F+E+
Sbjct: 457 CNIHKNAEMAQRVFKEI 473
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 227/475 (47%), Gaps = 46/475 (9%)
Query: 254 ALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCL-- 311
A+ TL S+ GNL A Q F + + T SL + Q + ++L QL CL
Sbjct: 19 AIATLCSK-GNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLP--SGKQLHCLLV 71
Query: 312 ----KPDCVTVASLVSACASVGAFRTGEQLHSYAIKVG-ISKDIIVEGSMLDLYVKCSDV 366
D L+S + +G F + ++ K +S +I++ G YV+ D+
Sbjct: 72 VSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILING-----YVRAGDL 126
Query: 367 ETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTC 426
A K F + WN M+ Q E +F++M G +P++YT ++
Sbjct: 127 VNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGS 186
Query: 427 TSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWT 464
L ++S+G+QIH + G L + ++R +P ++V+W
Sbjct: 187 AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWN 246
Query: 465 AMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYIS 524
+I+G Q+G L L++ M+ G + + I F + +S+C+ + QG+QIHA++
Sbjct: 247 TLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI 306
Query: 525 GFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVF 584
G S +++ ++LIS+Y++CG + +A F++ + +D + W+ +IS + G + A+++F
Sbjct: 307 GASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELF 366
Query: 585 SQMT-QVGVQANLYTFGSVVSAAANLANIKQGKQVHAMII-KTGYDSETEASNSLITLYA 642
+ M Q ++ N F +++ A ++ +G ++ M++ K G+ + ++ L
Sbjct: 367 NTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 426
Query: 643 KCGSIDDAKREFLEMPEKNE-VSWNAMITGFSQHGYALEAINLFEKMKKHDVMPN 696
+ G +D A+ MP K + V W +++ + H A A +F+++ + D PN
Sbjct: 427 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID--PN 479
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 203/437 (46%), Gaps = 38/437 (8%)
Query: 6 IQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFF------------- 52
I N+ F ++ C + SL K++H ++ GF ++ +C+
Sbjct: 40 IFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAV 99
Query: 53 ------------------NIYLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGR 94
N Y+ +GDL +A K+FD+M R + +WN +I+G + + +
Sbjct: 100 AVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEE 159
Query: 95 VLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPL 154
L LF +M P+E T V G +V++ QIHG I +G ++++ L
Sbjct: 160 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG--QQIHGYTIKYGLELDLVVNSSL 217
Query: 155 IDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTP 214
+Y +NG + + V ++ ++ V+W +I G +QNG + L+ M I G P
Sbjct: 218 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 277
Query: 215 YAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSK 274
+ LS+C+ + + G+Q H K G SS V ++L+++YS+ G L A + FS+
Sbjct: 278 ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 337
Query: 275 MQQRDGVTYNSLISGLAQCGYSDKALELFEKM-QLDCLKPDCVTVASLVSACASVGAFRT 333
+ D V ++S+IS G D+A+ELF M + ++ + V +L+ AC+ G
Sbjct: 338 REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDK 397
Query: 334 GEQLHSYAI-KVGISKDIIVEGSMLDLYVK--CSDVETAYKFFLTTETENVVLWNVMLVA 390
G +L + K G + ++DL + C D A + +T+ +V+W +L A
Sbjct: 398 GLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTD-IVIWKTLLSA 456
Query: 391 YGQLNDLSESFQIFKQM 407
+ + ++FK++
Sbjct: 457 CNIHKNAEMAQRVFKEI 473
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 146/331 (44%), Gaps = 8/331 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M G + T + G S+ ++IHG +K G + + V+ ++Y+ +G
Sbjct: 167 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK 226
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
L + M R + +WN LI G VL L+ M PN+ TFV VL +
Sbjct: 227 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 286
Query: 121 CIGSGNVAVQCV-NQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS 179
C ++A++ QIH I G + + LI +Y+K G + A K F+ +D
Sbjct: 287 C---SDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 343
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVP-TPYAISSALSACTKIELFEIG-EQFH 237
V W +MIS + +G EAI LF M + A + L AC+ L + G E F
Sbjct: 344 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFD 403
Query: 238 GLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQ-QRDGVTYNSLISGLAQCGYS 296
++ K+GF +V L R+G L AE I M + D V + +L+S +
Sbjct: 404 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 463
Query: 297 DKALELF-EKMQLDCLKPDCVTVASLVSACA 326
+ A +F E +Q+D C + + V A A
Sbjct: 464 EMAQRVFKEILQIDPNDSACYVLLANVHASA 494
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 33/226 (14%)
Query: 578 EGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSL 637
+G L+ Q ++ + N F + + ++ GKQ+H +++ +G+ S+ N L
Sbjct: 26 KGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHL 85
Query: 638 ITLYAK-------------------------------CGSIDDAKREFLEMPEKNEVSWN 666
+++Y+K G + +A++ F EMP++ +WN
Sbjct: 86 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 145
Query: 667 AMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTE 726
AMI G Q + E ++LF +M P+ T V S + + V+ G + + +
Sbjct: 146 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG-QQIHGYTIK 204
Query: 727 YGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLL 772
YGL + + + R G L MP+ + + W TL+
Sbjct: 205 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 249
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 273/823 (33%), Positives = 415/823 (50%), Gaps = 136/823 (16%)
Query: 148 PLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHI 207
P +N I ++ G I A+K+F++ K SW +M++G+ N R+A LF +M
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-- 74
Query: 208 LGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTS 267
P IS W N LV+ Y ++G +
Sbjct: 75 ----PDRNIIS------------------------W---------NGLVSGYMKNGEIDE 97
Query: 268 AEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACAS 327
A ++F M +R+ V++ +L+ G G D A LF KM P+ V+ V
Sbjct: 98 ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTVMLIGF 151
Query: 328 VGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVM 387
+ R + Y ++ KD I SM+ K V+ A + F +V+ W M
Sbjct: 152 LQDGRIDDACKLY--EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209
Query: 388 LVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNT 447
+ YGQ N ++
Sbjct: 210 VTGYGQNN------------------------------------------------RVDD 221
Query: 448 AQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAG 507
A++I +PE VSWT+M++G+VQ+G +A ELFE M + + AC
Sbjct: 222 ARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK-----------PVIAC-- 268
Query: 508 IQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGL 567
NA+IS + G I +A VF+ + +++ SW +
Sbjct: 269 --------------------------NAMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302
Query: 568 ISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGY 627
I ++G+ AL +F M + GV+ T S++S A+LA++ GKQVHA +++ +
Sbjct: 303 IKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 628 DSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEK 687
D + ++ L+T+Y KCG + +K F P K+ + WN++I+G++ HG EA+ +F +
Sbjct: 363 DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCE 422
Query: 688 MK-KHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRA 746
M PN VTFV LSACS+ G+V EGL+ +ESM + +G+ P HYAC+VD+LGRA
Sbjct: 423 MPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRA 482
Query: 747 GCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLS 806
G + A E + M +EPDA VW +LL ACR H +++ E+ A L+E+EPE+S TY+LLS
Sbjct: 483 GRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLS 542
Query: 807 NIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGD-RLHPLADKIYDYL 865
N+YA+ G+W ++R++MK R V+K PG SW EV+N +HAF G HP + I L
Sbjct: 543 NMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKIL 602
Query: 866 GNLNRRVAEIGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNL 925
L+ + E GY D+++E+K + HSE+LA+A+ LL LS+ +PI V+KNL
Sbjct: 603 DELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNL 662
Query: 926 RVCNDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
RVC+DCH IK +SK+ R I++RDANRFHHF G CSC+DYW
Sbjct: 663 RVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 214/452 (47%), Gaps = 30/452 (6%)
Query: 55 YLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATF 114
Y+ +G++D A K+FD M +R V SW L+ G+V LF +M + + +
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148
Query: 115 VGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNL 174
+G L+ G + C +++ +I + +I K G +D A+++F+ +
Sbjct: 149 IGFLQ----DGRIDDAC--KLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 175 CFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGE 234
+ ++W M++G+ QN +A +F M T + +S L + E E
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 235 QFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCG 294
+ +F+ CNA+++ + G + A ++F M++R+ ++ ++I + G
Sbjct: 255 E----LFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNG 310
Query: 295 YSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEG 354
+ +AL+LF MQ ++P T+ S++S CAS+ + G+Q+H+ ++ D+ V
Sbjct: 311 FELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVAS 370
Query: 355 SMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLT- 413
++ +Y+KC ++ + F ++++++WN ++ Y E+ ++F +M G T
Sbjct: 371 VLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTK 430
Query: 414 PNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQH 473
PN+ T+ L C+ G + G +I+ + ++ + I + M+ +
Sbjct: 431 PNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPI--------TAHYACMVDMLGRA 482
Query: 474 GMFGEALELFEEMENQGIQSDNIGFSSAISAC 505
G F EA+E+ + M ++ D + S + AC
Sbjct: 483 GRFNEAMEMIDSM---TVEPDAAVWGSLLGAC 511
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 186/390 (47%), Gaps = 23/390 (5%)
Query: 7 QANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMK 66
+ N ++ +L G L G + +A K++ I D + + + G +D A +
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEARE 193
Query: 67 IFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIP--NEATFVGVLRACIGS 124
IFD+MS+R+V +W +++G+ +F DV+P E ++ +L + +
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGYVQN 247
Query: 125 GNVAVQCVNQIHGLIISHGFGGSPLIS-NPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWV 183
G + + ++ ++ P+I+ N +I + G I A++VF+++ ++ SW
Sbjct: 248 GRI--EDAEELFEVMPV-----KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQ 300
Query: 184 AMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKW 243
+I +NG+E EA+ LF M G PT + S LS C + G+Q H + +
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC 360
Query: 244 GFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELF 303
F + +V + L+T+Y + G L ++ IF + +D + +NS+ISG A G ++AL++F
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVF 420
Query: 304 EKMQLD-CLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVE-GSMLDLYV 361
+M L KP+ VT + +SAC+ G G +++ V K I M+D+
Sbjct: 421 CEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLG 480
Query: 362 KCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
+ A + + E + +W +L A
Sbjct: 481 RAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M+++G++ T + +L C S SL K++H ++++ FD + + +Y+ G+
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQM-IDDDVIPNEATFVGVLR 119
L + IFD + + WN +ISG+ + L L +F +M + PNE TFV L
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Query: 120 ACIGSGNVAVQCVNQIHGLIISHG----FGGSPLISN--PLIDLYAKNGFIDSAKKVFNN 173
AC +G V GL I FG P+ ++ ++D+ + G + A ++ ++
Sbjct: 442 ACSYAGMVE-------EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 174 LCFK-DSVSWVAMI 186
+ + D+ W +++
Sbjct: 495 MTVEPDAAVWGSLL 508
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/621 (37%), Positives = 363/621 (58%), Gaps = 30/621 (4%)
Query: 378 TENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYT--------YPTILRTCTSL 429
T N ++ +L + LS + + E ++P +Y+ IL+ C
Sbjct: 15 TVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARN 74
Query: 430 GALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWTAMI 467
GA+ + H ++ G + A+++ + E +VSW MI
Sbjct: 75 GAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMI 134
Query: 468 VGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFS 527
+ ++ M EAL++F EM N+G + SS +SAC + +++H S +
Sbjct: 135 GLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCID 194
Query: 528 DDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQM 587
+L +G AL+ LYA+CG I++A VF + K +++W+ +++G+ Q+ E AL ++ +
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 254
Query: 588 TQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSI 647
++ ++ N +T SV+ A +NLA + +GKQ+HA+I K+G+ S ++S + +YAKCGS+
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 314
Query: 648 DDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGVLSAC 707
++ F E+ EKN WN +I+GF++H E + LFEKM++ + PN VTF +LS C
Sbjct: 315 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
Query: 708 SHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFTEQMPIEPDAMV 767
H GLV EG R+F+ M T YGL P HY+C+VD+LGRAG LS A E + +P +P A +
Sbjct: 375 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 434
Query: 768 WRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKD 827
W +LL++CRV+KN+E+ E AA L ELEPE++ +VLLSNIYAA +W+ + R++++D
Sbjct: 435 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 494
Query: 828 RGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAEIGYVQGRYSLWSD 887
VKK G+SWI++K+ +H F VG+ HP +I L NL + + GY D
Sbjct: 495 CDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHD 554
Query: 888 LEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWIKFVSKISNRTIV 947
+E +K+ + HSEKLA+ FGL+ L +S P+ ++KNLR+C DCH ++K S + R I+
Sbjct: 555 VEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFII 614
Query: 948 VRDANRFHHFEGGVCSCRDYW 968
VRD NRFHHF G CSC D+W
Sbjct: 615 VRDVNRFHHFSDGHCSCGDFW 635
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 218/432 (50%), Gaps = 39/432 (9%)
Query: 16 LLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDDMSKRT 75
+L+ C G+++EAK HGKI+++ +G+ L + N Y G ++ A ++FD M +R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 76 VFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQCVNQI 135
+ SWN +I + ++ L +FL+M ++ +E T VL AC G A++C ++
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC-GVNCDALEC-KKL 184
Query: 136 HGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYE 195
H L + + + L+DLYAK G I A +VF ++ K SV+W +M++G+ QN
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 196 REAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNAL 255
EA+LL+ + + + +SS + AC+ + G+Q H +I K GF S FV ++
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 256 VTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDC 315
V +Y++ G+L + IFS++Q+++ +N++ISG A+ + + LFEKMQ D + P+
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 316 VTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLT 375
VT +SL+S C G G + +K T
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRF--------------------------------FKLMRT 392
Query: 376 TE--TENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALS 433
T + NVV ++ M+ G+ LSE++++ K + P + ++L +C L
Sbjct: 393 TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP---FDPTASIWGSLLASCRVYKNLE 449
Query: 434 LGEQIHTQLGNL 445
L E +L L
Sbjct: 450 LAEVAAEKLFEL 461
Score = 176 bits (446), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 191/371 (51%), Gaps = 12/371 (3%)
Query: 117 VLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCF 176
+L+ C +G AV HG II G + N LI+ Y+K GF++ A++VF+ +
Sbjct: 67 ILQLCARNG--AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE 124
Query: 177 KDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSAC-TKIELFEIGEQ 235
+ VSW MI +++N E EA+ +F +M G + + ISS LSAC + E ++
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KK 183
Query: 236 FHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGY 295
H L K +V AL+ LY++ G + A Q+F MQ + VT++S+++G Q
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 296 SDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGS 355
++AL L+ + Q L+ + T++S++ AC+++ A G+Q+H+ K G ++ V S
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 356 MLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPN 415
+D+Y KC + +Y F + +N+ LWN ++ + + E +F++MQ +G+ PN
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Query: 416 QYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGM 475
+ T+ ++L C G + G + + +VV ++ M+ + G+
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLS--------PNVVHYSCMVDILGRAGL 415
Query: 476 FGEALELFEEM 486
EA EL + +
Sbjct: 416 LSEAYELIKSI 426
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 181/364 (49%), Gaps = 23/364 (6%)
Query: 318 VASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTE 377
V ++ CA GA + H I++ + D+ + +++ Y KC VE A + F
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 378 TENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRT---------CTS 428
++V WN M+ Y + SE+ IF +M+ EG +++T ++L C
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 429 LGALSLGE-------------QIHTQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGM 475
L LS+ ++ + G + A ++ + + V+W++M+ G+VQ+
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 476 FGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNA 535
+ EAL L+ + ++ + SS I AC+ + AL +G+Q+HA SGF ++ + ++
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 536 LISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQAN 595
+ +YA+CG ++E+Y++F+++ K+ WN +ISGFA+ + + +F +M Q G+ N
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Query: 596 LYTFGSVVSAAANLANIKQGKQVHAMIIKT-GYDSETEASNSLITLYAKCGSIDDAKREF 654
TF S++S + +++G++ ++ T G + ++ + + G + +A
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423
Query: 655 LEMP 658
+P
Sbjct: 424 KSIP 427
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 173/358 (48%), Gaps = 24/358 (6%)
Query: 237 HGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYS 296
HG I + + + N L+ YS+ G + A Q+F M +R V++N++I +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 297 DKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSM 356
+AL++F +M+ + K T++S++SAC ++LH ++K I ++ V ++
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 357 LDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQ 416
LDLY KC ++ A + F + + ++ V W+ M+ Y Q + E+ ++++ Q L NQ
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 417 YTYPTILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRR 454
+T +++ C++L AL G+Q+H + G+L + I
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 323
Query: 455 LPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQG 514
+ E ++ W +I GF +H E + LFE+M+ G+ + + FSS +S C + +G
Sbjct: 324 VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG 383
Query: 515 RQIHAQSYIS-GFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNIS-WNGLISG 570
R+ + G S ++ + ++ + R G + EAY + I S W L++
Sbjct: 384 RRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 3/276 (1%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M G + + T +L C LE KK+H +K D + ++Y G
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
+ A+++F+ M ++ +W+ +++G+V K L L+ + + N+ T V+ A
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 272
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSV 180
C S A+ Q+H +I GFG + +++ +D+YAK G + + +F+ + K+
Sbjct: 273 C--SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 181 SWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLI 240
W +ISGF+++ +E ++LF +M G P SS LS C L E G +F L+
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Query: 241 -FKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKM 275
+G S + +V + R+G L+ A ++ +
Sbjct: 391 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSA 64
++ N T ++ C + +L+E K++H I K GF + ++Y G L +
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 65 MKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGS 124
IF ++ ++ + WN +ISGF V+ LF +M D + PNE TF +L C +
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377
Query: 125 GNVAVQCVNQIHGLI-ISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVS-W 182
G V+ + L+ ++G + + + ++D+ + G + A ++ ++ F + S W
Sbjct: 378 G--LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIW 435
Query: 183 VAMISG 188
++++
Sbjct: 436 GSLLAS 441
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/693 (34%), Positives = 393/693 (56%), Gaps = 34/693 (4%)
Query: 305 KMQLDCLKPDCVTV----ASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGS-MLDL 359
+ +L C+ D +T + L+ C + + + ++ +K G +I GS ++D
Sbjct: 51 QFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI--SGSKLVDA 108
Query: 360 YVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTY 419
+KC D++ A + F ++V WN ++ + E+ ++++ M T + P++YT
Sbjct: 109 SLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 420 PTILRTCTSLG-----------ALSLGEQI------------HTQLGNLNTAQEILRRLP 456
++ + + L A+ LG ++ + + G A+ +L R+
Sbjct: 169 SSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVE 228
Query: 457 EDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQ 516
E DVV TA+IVG+ Q G EA++ F+ M + +Q + ++S + +C ++ + G+
Sbjct: 229 EKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKL 288
Query: 517 IHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGY 576
IH SGF L+ +L+++Y RC + ++ VF I+ + +SW LISG Q+G
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGR 348
Query: 577 CEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNS 636
E AL F +M + ++ N +T S + +NLA ++G+Q+H ++ K G+D + A +
Sbjct: 349 EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG 408
Query: 637 LITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPN 696
LI LY KCG D A+ F + E + +S N MI ++Q+G+ EA++LFE+M + PN
Sbjct: 409 LIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPN 468
Query: 697 HVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAREFT 756
VT + VL AC++ LV EG F+S + ++ +HYAC+VDLLGRAG L A T
Sbjct: 469 DVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLT 527
Query: 757 EQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWD 816
++ I PD ++WRTLLSAC+VH+ +E+ E +LE+EP D T +L+SN+YA+ GKW+
Sbjct: 528 TEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWN 586
Query: 817 CRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRL-HPLADKIYDYLGNLNRRVAEI 875
+++ MKD +KK P SW+E+ H F GD HP +++I + L L ++ ++
Sbjct: 587 RVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDL 646
Query: 876 GYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLSLSDSMPILVIKNLRVCNDCHNWI 935
GYV+ + ++ D+E+ K+ ++ HSEKLAIAF + + I ++KNLRVC DCH+WI
Sbjct: 647 GYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWI 705
Query: 936 KFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
K VS++ R I+ RD+ RFHHF G CSC DYW
Sbjct: 706 KIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 212/422 (50%), Gaps = 4/422 (0%)
Query: 8 ANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKI 67
+ F LL C+ S+ K I +LK GF E + K + L GD+D A ++
Sbjct: 63 TTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQV 121
Query: 68 FDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNV 127
FD MS+R + +WN LI+ + + S + ++ MI ++V+P+E T V +A S
Sbjct: 122 FDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAF--SDLS 179
Query: 128 AVQCVNQIHGLIISHGFGGSPL-ISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMI 186
+ + HGL + G S + + + L+D+Y K G AK V + + KD V A+I
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 187 SGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFS 246
G+SQ G + EA+ F M + P Y +S L +C ++ G+ HGL+ K GF
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE 299
Query: 247 SETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKM 306
S +L+T+Y R + + ++F ++ + V++ SLISGL Q G + AL F KM
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 307 QLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDV 366
D +KP+ T++S + C+++ F G Q+H K G +D ++DLY KC
Sbjct: 360 MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 367 ETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTC 426
+ A F T +V+ N M+ +Y Q E+ +F++M GL PN T ++L C
Sbjct: 420 DMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLAC 479
Query: 427 TS 428
+
Sbjct: 480 NN 481
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 138/287 (48%), Gaps = 8/287 (2%)
Query: 6 IQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAM 65
+Q N T+ +L C + + K IHG ++K GF+ +YL +D ++
Sbjct: 263 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 322
Query: 66 KIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSG 125
++F + SW LISG V L F +M+ D + PN T LR C
Sbjct: 323 RVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC---S 379
Query: 126 NVAV-QCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVA 184
N+A+ + QIHG++ +GF + LIDLY K G D A+ VF+ L D +S
Sbjct: 380 NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNT 439
Query: 185 MISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIG-EQFHGLIF-K 242
MI ++QNG+ REA+ LF +M LG P + S L AC L E G E F K
Sbjct: 440 MIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDK 499
Query: 243 WGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISG 289
+++ + C +V L R+G L AE + +++ D V + +L+S
Sbjct: 500 IMLTNDHYAC--MVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M I+ NS T L GC + E ++IHG + K GFD ++ ++Y G
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRA 120
D A +FD +S+ V S N +I + L LF +MI+ + PN+ T + VL A
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
Query: 121 CIGSGNVAVQCVNQIHGLIISHGFGGSPLISNP----LIDLYAKNGFIDSAKKVFNNLCF 176
C S V C + +++N ++DL + G ++ A+ + +
Sbjct: 479 CNNSRLVEEGCE------LFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVIN 532
Query: 177 KDSVSWVAMISG 188
D V W ++S
Sbjct: 533 PDLVLWRTLLSA 544
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/700 (35%), Positives = 387/700 (55%), Gaps = 68/700 (9%)
Query: 333 TGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYG 392
TG+ LH+ +K ++ + ++LY KC + A F +TE NV +NV++ AY
Sbjct: 26 TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA 85
Query: 393 Q----------------------------LNDLSESFQ---IFKQMQTEGLTPNQYTYPT 421
+ D E+F +FK+M+ G + +T
Sbjct: 86 KDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSG 145
Query: 422 ILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPE-D 458
++ C + L +Q+H ++ G L A + + E
Sbjct: 146 LIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 459 DVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIH 518
D VSW +MIV + QH +AL L++EM +G + D +S ++A + L GRQ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 519 AQSYISGFSDDLSIGNALISLYARCGRIQEAY---LVFNKIDAKDNISWNGLISGFAQSG 575
+ +GF + +G+ LI Y++CG Y VF +I + D + WN +ISG++ +
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 576 -YCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDS-ETEA 633
E A++ F QM ++G + + +F V SA +NL++ Q KQ+H + IK+ S
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 634 SNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDV 693
+N+LI+LY K G++ DA+ F MPE N VS+N MI G++QHG+ EA+ L+++M +
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 694 MPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRAR 753
PN +TFV VLSAC+H G V+EG YF +M + + P+ EHY+C++DLLGRAG L A
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 754 EFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAG 813
F + MP +P ++ W LL ACR HKNM + E AAN L+ ++P + YV+L+N+YA A
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADAR 563
Query: 814 KWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVA 873
KW+ +R+ M+ + ++K+PG SWIEVK H F D HP+ ++ +YL + +++
Sbjct: 564 KWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMK 623
Query: 874 EIGYVQGRYSLWSDLEQEQKDPCVYI-----HSEKLAIAFGLLSLSDSMPILVIKNLRVC 928
++GYV + W+ +++++ HSEKLA+AFGL+S D ++V+KNLR+C
Sbjct: 624 KVGYVMDKK--WAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRIC 681
Query: 929 NDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
DCHN IKF+S ++ R I+VRD RFH F+ G CSC DYW
Sbjct: 682 GDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 268/568 (47%), Gaps = 76/568 (13%)
Query: 221 LSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAE----------- 269
L + + +LF G+ H L K +S T++ N V LYS+ G L+ A
Sbjct: 16 LKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNV 74
Query: 270 --------------------QIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLD 309
Q+F ++ Q D V+YN+LISG A + A+ LF++M+
Sbjct: 75 FSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL 134
Query: 310 CLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETA 369
+ D T++ L++AC +QLH +++ G V + + Y K + A
Sbjct: 135 GFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 370 YK-FFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTS 428
F+ E + V WN M+VAYGQ + +++ ++K+M +G + +T ++L TS
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 429 LGALSLGEQIHTQL-------------------------GNLNTAQEILRRLPEDDVVSW 463
L L G Q H +L + ++++ + + D+V W
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 464 TAMIVGF-VQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSY 522
MI G+ + + EA++ F +M+ G + D+ F SAC+ + + +Q +QIH +
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAI 372
Query: 523 ISGF-SDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGAL 581
S S+ +S+ NALISLY + G +Q+A VF+++ + +S+N +I G+AQ G+ AL
Sbjct: 373 KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEAL 432
Query: 582 QVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKT-GYDSETEASNSLITL 640
++ +M G+ N TF +V+SA A+ + +G++ + +T + E E + +I L
Sbjct: 433 LLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDL 492
Query: 641 YAKCGSIDDAKREFLEMPEK-NEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVT 699
+ G +++A+R MP K V+W A++ +H + M + N +
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH----------KNMALAERAANELM 542
Query: 700 FVGVLSACSHVGLVN--EGLRYFESMST 725
+ L+A +V L N R +E M++
Sbjct: 543 VMQPLAATPYVMLANMYADARKWEEMAS 570
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 223/452 (49%), Gaps = 42/452 (9%)
Query: 152 NPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTV 211
N ++ YAK+ I A+++F+ + D+VS+ +ISG++ A++LF +M LG
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 212 PTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQI 271
+ +S ++AC + ++ +Q H GF S + V NA VT YS+ G L A +
Sbjct: 138 VDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 272 FSKMQQ-RDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGA 330
F M + RD V++NS+I Q KAL L+++M K D T+AS+++A S+
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 331 FRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETAY---KFFLTTETENVVLWNVM 387
G Q H IK G ++ V ++D Y KC + Y K F + ++V+WN M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 388 LVAYGQLNDLS-ESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH------- 439
+ Y +LS E+ + F+QMQ G P+ ++ + C++L + S +QIH
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 440 ----------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELF 483
+ GNL A+ + R+PE + VS+ MI G+ QHG EAL L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 484 EEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIG------NALI 537
+ M + GI + I F + +SACA +++G Q Y + + I + +I
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEG-----QEYFNTMKETFKIEPEAEHYSCMI 490
Query: 538 SLYARCGRIQEAYLVFNKIDAKD-NISWNGLI 568
L R G+++EA + + K +++W L+
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 221/457 (48%), Gaps = 21/457 (4%)
Query: 55 YLTSGDLDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATF 114
Y + A ++FD++ + S+N LISG+ + + + LF +M + T
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 115 VGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNL 174
G++ AC V + Q+H +S GF ++N + Y+K G + A VF +
Sbjct: 144 SGLIAACCDR----VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 175 C-FKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIG 233
+D VSW +MI + Q+ +A+ L+ +M G + ++S L+A T ++ G
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 234 EQFHGLIFKWGFSSETFVCNALVTLYSRSG---NLTSAEQIFSKMQQRDGVTYNSLISGL 290
QFHG + K GF + V + L+ YS+ G + +E++F ++ D V +N++ISG
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGY 319
Query: 291 AQC-GYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGI-SK 348
+ S++A++ F +MQ +PD + + SAC+++ + +Q+H AIK I S
Sbjct: 320 SMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSN 379
Query: 349 DIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQ 408
I V +++ LY K +++ A F N V +N M+ Y Q +E+ ++++M
Sbjct: 380 RISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRML 439
Query: 409 TEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVSWTAMIV 468
G+ PN+ T+ +L C G + G++ NT +E + PE + ++ MI
Sbjct: 440 DSGIAPNKITFVAVLSACAHCGKVDEGQEY------FNTMKETFKIEPEAE--HYSCMID 491
Query: 469 GFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISAC 505
+ G EA + M + ++ +++ + AC
Sbjct: 492 LLGRAGKLEEAERFIDAMP---YKPGSVAWAALLGAC 525
Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 178/379 (46%), Gaps = 11/379 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M + G + + T L+ C L+ K++H + GFD + + F Y G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 61 LDSAMKIFDDMSK-RTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLR 119
L A+ +F M + R SWN +I + K + L L+ +MI + T VL
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 120 ACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFID---SAKKVFNNLCF 176
A ++ Q HG +I GF + + + LID Y+K G D ++KVF +
Sbjct: 249 ALTSLDHLIGG--RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 177 KDSVSWVAMISGFSQNG-YEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQ 235
D V W MISG+S N EA+ F QM +G P + SAC+ + +Q
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 236 FHGLIFKWGFSSETF-VCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCG 294
HGL K S V NAL++LY +SGNL A +F +M + + V++N +I G AQ G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 295 YSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQ-LHSYAIKVGISKDIIVE 353
+ +AL L+++M + P+ +T +++SACA G G++ ++ I +
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 354 GSMLDLYVKCSDVETAYKF 372
M+DL + +E A +F
Sbjct: 487 SCMIDLLGRAGKLEEAERF 505
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 36/214 (16%)
Query: 598 TFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFL-- 655
TF ++ + ++ GK +HA+ +K+ S T SN + LY+KCG + A+ F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 656 -----------------------------EMPEKNEVSWNAMITGFSQHGYALEAINLFE 686
E+P+ + VS+N +I+G++ A+ LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 687 KMKKHDVMPNHVTFVGVLSA-CSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGR 745
+M+K + T G+++A C V L+ + S G V +
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLIKQ----LHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 746 AGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHK 779
G L A M D + W +++ A HK
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK 219
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/640 (36%), Positives = 362/640 (56%), Gaps = 65/640 (10%)
Query: 394 LNDLSESFQ------IFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH-------- 439
L DLS S + +++++ G +Q+++ IL+ + + AL G ++H
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 440 --------------TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEE 485
G +N A+ + + DVV+W MI + + G+ EA +LFEE
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 486 MENQGIQSDNIGFSSAISACAGIQALNQGRQIH--------------------------- 518
M++ + D + + +SAC + R I+
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC 262
Query: 519 ---AQSYISGFS-DDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQS 574
A+ + S +L + A++S Y++CGR+ +A ++F++ + KD + W +IS + +S
Sbjct: 263 MDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES 322
Query: 575 GYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEAS 634
Y + AL+VF +M G++ ++ + SV+SA ANL + + K VH+ I G +SE +
Sbjct: 323 DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSIN 382
Query: 635 NSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVM 694
N+LI +YAKCG +D + F +MP +N VSW++MI S HG A +A++LF +MK+ +V
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE 442
Query: 695 PNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGCLSRARE 754
PN VTFVGVL CSH GLV EG + F SM+ EY + PK EHY C+VDL GRA L A E
Sbjct: 443 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALE 502
Query: 755 FTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGK 814
E MP+ + ++W +L+SACR+H +E+G++AA +LELEP+ VL+SNIYA +
Sbjct: 503 VIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQR 562
Query: 815 WDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLADKIYDYLGNLNRRVAE 874
W+ IR++M+++ V KE G S I+ H F +GD+ H +++IY L + ++
Sbjct: 563 WEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKL 622
Query: 875 IGYVQGRYSLWSDLEQEQKDPCVYIHSEKLAIAFGLLS-----LSDSMPIL-VIKNLRVC 928
GYV S+ D+E+E+K V HSEKLA+ FGL++ DS ++ ++KNLRVC
Sbjct: 623 AGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVC 682
Query: 929 NDCHNWIKFVSKISNRTIVVRDANRFHHFEGGVCSCRDYW 968
DCH + K VSK+ R I+VRD RFH ++ G+CSCRDYW
Sbjct: 683 EDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 202/453 (44%), Gaps = 55/453 (12%)
Query: 279 DGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLH 338
+ + +N + L++ + +++++ + D + ++ A + V A G +LH
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 339 SYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLS 398
A K+ D VE +D+Y C + A F +VV WN M+ Y + +
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 399 ESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIH------------------- 439
E+F++F++M+ + P++ I+ C G + I+
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 440 ----------------------------------TQLGNLNTAQEILRRLPEDDVVSWTA 465
++ G L+ AQ I + + D+V WT
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314
Query: 466 MIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISG 525
MI +V+ EAL +FEEM GI+ D + S ISACA + L++ + +H+ +++G
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 526 FSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFS 585
+LSI NALI++YA+CG + VF K+ ++ +SW+ +I+ + G AL +F+
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 586 QMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHA-MIIKTGYDSETEASNSLITLYAKC 644
+M Q V+ N TF V+ ++ +++GK++ A M + + E ++ L+ +
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 645 GSIDDAKREFLEMP-EKNEVSWNAMITGFSQHG 676
+ +A MP N V W ++++ HG
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 203/461 (44%), Gaps = 65/461 (14%)
Query: 178 DSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFH 237
+S+ + + S++ R IL + ++ +G ++ L A +K+ G + H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 238 GLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSD 297
G+ FK + FV + +Y+ G + A +F +M RD VT+N++I + G D
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 298 KALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKD-------- 349
+A +LFE+M+ + PD + + ++VSAC G R ++ + I+ + D
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 350 -----------------------IIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNV 386
+ V +M+ Y KC ++ A F TE +++V W
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314
Query: 387 MLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHT------ 440
M+ AY + + E+ ++F++M G+ P+ + +++ C +LG L + +H+
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 441 ----------------QLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFE 484
+ G L+ +++ ++P +VVSW++MI HG +AL LF
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 485 EMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNAL------IS 538
M+ + ++ + + F + C+ + +G++I A +D+ +I L +
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA-----SMTDEYNITPKLEHYGCMVD 489
Query: 539 LYARCGRIQEAYLVFNKIDAKDNIS-WNGLISGFAQSGYCE 578
L+ R ++EA V + N+ W L+S G E
Sbjct: 490 LFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 203/422 (48%), Gaps = 44/422 (10%)
Query: 12 TFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKF-----FNIYLTSGDLDSAMK 66
+F+ +L+ +L E ++HG K+ LCD F ++Y + G ++ A
Sbjct: 113 SFLPILKAVSKVSALFEGMELHGVAFKIA-----TLCDPFVETGFMDMYASCGRINYARN 167
Query: 67 IFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGN 126
+FD+MS R V +WN +I + L LF +M D +V+P+E ++ AC +GN
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN 227
Query: 127 VAVQC--------------VNQIHGLIISHGFGG---------------SPLISNPLIDL 157
+ + + L+ + G + +S ++
Sbjct: 228 MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSG 287
Query: 158 YAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAI 217
Y+K G +D A+ +F+ KD V W MIS + ++ Y +EA+ +F +M G P ++
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 218 SSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQ 277
S +SAC + + + + H I G SE + NAL+ +Y++ G L + +F KM +
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 278 RDGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQL 337
R+ V+++S+I+ L+ G + AL LF +M+ + ++P+ VT ++ C+ G G+++
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 338 H-SYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTET-ENVVLWNVMLVA---YG 392
S + I+ + G M+DL+ + + + A + + NVV+W ++ A +G
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Query: 393 QL 394
+L
Sbjct: 528 EL 529
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 213/474 (44%), Gaps = 46/474 (9%)
Query: 134 QIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFSQNG 193
++HG+ P + +D+YA G I+ A+ VF+ + +D V+W MI + + G
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 194 YEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSETFVCN 253
EA LF +M +P + + +SAC + + + + +T +
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 254 ALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCG------------------- 294
ALVT+Y+ +G + A + F KM R+ +++SG ++CG
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 295 ------------YSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAI 342
Y +AL +FE+M +KPD V++ S++SACA++G + +HS
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 343 KVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQ 402
G+ ++ + +++++Y KC ++ F NVV W+ M+ A + S++
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 403 IFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQLGNLNTAQEILRRLPEDDVVS 462
+F +M+ E + PN+ T+ +L C+ G + G++I ++ I +L
Sbjct: 432 LFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI---FASMTDEYNITPKLEH----- 483
Query: 463 WTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSY 522
+ M+ F + + EALE+ E M + S+ + + S +SAC L G+ A
Sbjct: 484 YGCMVDLFGRANLLREALEVIESMP---VASNVVIWGSLMSACRIHGELELGK--FAAKR 538
Query: 523 ISGFSDDLSIGNALIS-LYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSG 575
I D L+S +YAR R ++ + ++ K+ GL S Q+G
Sbjct: 539 ILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGL-SRIDQNG 591
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 123/254 (48%), Gaps = 2/254 (0%)
Query: 509 QALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAK-DNISWNGL 567
++LN +Q+HA + + L+ +S+ + + A VF+ I + ++I +N
Sbjct: 23 KSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPF 82
Query: 568 ISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGY 627
+ ++S + + ++ VG + + ++F ++ A + ++ + +G ++H + K
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 628 DSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEK 687
+ + +YA CG I+ A+ F EM ++ V+WN MI + + G EA LFE+
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 688 MKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAG 747
MK +VMP+ + ++SAC G + +E + E + +V + AG
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL-IENDVRMDTHLLTALVTMYAGAG 261
Query: 748 CLSRAREFTEQMPI 761
C+ AREF +M +
Sbjct: 262 CMDMAREFFRKMSV 275
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 5 GIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSA 64
GI+ + + ++ C + G L +AK +H I G + E + + N+Y G LD+
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 65 MKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGS 124
+F+ M +R V SW+ +I+ + L LF +M ++V PNE TFVGVL C S
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 125 GNV 127
G V
Sbjct: 459 GLV 461
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/674 (34%), Positives = 379/674 (56%), Gaps = 24/674 (3%)
Query: 219 SALSACTKIELFEIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQR 278
S + AC+ G + H I +T + N ++++Y + G+L A ++F M +R
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 279 DGVTYNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLH 338
+ V+Y S+I+G +Q G +A+ L+ KM + L PD S++ ACAS G+QLH
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 339 SYAIKVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLS 398
+ IK+ S +I + +++ +YV+ + + A + F ++++ W+ ++ + QL
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 399 ESFQIFKQMQTEGL-TPNQYTYPTILRTCTSLGALSLGEQIH------------------ 439
E+ K+M + G+ PN+Y + + L+ C+SL G QIH
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 440 ----TQLGNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDN 495
+ G LN+A+ + ++ D SW +I G +G EA+ +F +M + G D
Sbjct: 312 CDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDA 371
Query: 496 IGFSSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNK 555
I S + A AL+QG QIH+ GF DL++ N+L+++Y C + + +F
Sbjct: 372 ISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431
Query: 556 I-DAKDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQ 614
+ D++SWN +++ Q L++F M + + T G+++ ++++K
Sbjct: 432 FRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKL 491
Query: 615 GKQVHAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQ 674
G QVH +KTG E N LI +YAKCGS+ A+R F M ++ VSW+ +I G++Q
Sbjct: 492 GSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQ 551
Query: 675 HGYALEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPE 734
G+ EA+ LF++MK + PNHVTFVGVL+ACSHVGLV EGL+ + +M TE+G+ P E
Sbjct: 552 SGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKE 611
Query: 735 HYACVVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLEL 794
H +CVVDLL RAG L+ A F ++M +EPD +VW+TLLSAC+ N+ + + AA ++L++
Sbjct: 612 HCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKI 671
Query: 795 EPEDSATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRL 854
+P +S +VLL +++A++G W+ +R MK VKK PGQSWIE+++ IH FF D
Sbjct: 672 DPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIF 731
Query: 855 HPLADKIYDYLGNL 868
HP D IY L N+
Sbjct: 732 HPERDDIYTVLHNI 745
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/591 (29%), Positives = 299/591 (50%), Gaps = 28/591 (4%)
Query: 11 QTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDD 70
+T++ L+ C S SL + +KIH IL + +L + ++Y G L A ++FD
Sbjct: 68 RTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 71 MSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGNVAVQ 130
M +R + S+ +I+G+ + L+L+M+ +D++P++ F +++AC S +V +
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 131 CVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVSWVAMISGFS 190
Q+H +I + N LI +Y + + A +VF + KD +SW ++I+GFS
Sbjct: 188 --KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 191 QNGYEREAILLFCQMHILGTV-PTPYAISSALSACTKIELFEIGEQFHGLIFKWGFSSET 249
Q G+E EA+ +M G P Y S+L AC+ + + G Q HGL K +
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 250 FVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELFEKMQLD 309
+L +Y+R G L SA ++F ++++ D ++N +I+GLA GY+D+A+ +F +M+
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 310 CLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKCSDVETA 369
PD +++ SL+ A A G Q+HSY IK G D+ V S+L +Y CSD+
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 370 YKFFLT-TETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTILRTCTS 428
+ F + V WN +L A Q E ++FK M P+ T +LR C
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVE 485
Query: 429 LGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDDVVSWTAM 466
+ +L LG Q+H + G+L A+ I + DVVSW+ +
Sbjct: 486 ISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 467 IVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYIS-G 525
IVG+ Q G EAL LF+EM++ GI+ +++ F ++AC+ + + +G +++A G
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 526 FSDDLSIGNALISLYARCGRIQEAYLVFNKIDAK-DNISWNGLISGFAQSG 575
S + ++ L AR GR+ EA +++ + D + W L+S G
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 186/389 (47%), Gaps = 9/389 (2%)
Query: 7 QANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMK 66
N F L+ C S +IHG +K G + ++Y G L+SA +
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR 326
Query: 67 IFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGSGN 126
+FD + + SWN +I+G + + +F QM IP+ + +L C +
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTKP 384
Query: 127 VAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFK---DSVSWV 183
+A+ QIH II GF + N L+ +Y + +F + F+ DSVSW
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED--FRNNADSVSWN 442
Query: 184 AMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKW 243
+++ Q+ E + LF M + P + + L C +I ++G Q H K
Sbjct: 443 TILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT 502
Query: 244 GFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELF 303
G + E F+ N L+ +Y++ G+L A +IF M RD V++++LI G AQ G+ ++AL LF
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILF 562
Query: 304 EKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLH-SYAIKVGISKDIIVEGSMLDLYVK 362
++M+ ++P+ VT +++AC+ VG G +L+ + + GIS ++DL +
Sbjct: 563 KEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLAR 622
Query: 363 CSDVETAYKFFLTTETE-NVVLWNVMLVA 390
+ A +F + E +VV+W +L A
Sbjct: 623 AGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 165/315 (52%), Gaps = 16/315 (5%)
Query: 467 IVGFVQHGMFGEALELFE-EMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISG 525
I + + EALE F+ +N + + S I AC+ ++L QGR+IH S
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 526 FSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEGALQVFS 585
D + N ++S+Y +CG +++A VF+ + ++ +S+ +I+G++Q+G A++++
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 586 QMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYDSETEASNSLITLYAKCG 645
+M Q + + + FGS++ A A+ +++ GKQ+HA +IK S A N+LI +Y +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 646 SIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVM-PNHVTFVGVL 704
+ DA R F +P K+ +SW+++I GFSQ G+ EA++ ++M V PN F L
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 705 SACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVV------DLLGRAGCLSRAREFTEQ 758
ACS + + G S +GL K E + D+ R G L+ AR +Q
Sbjct: 278 KACSSLLRPDYG-------SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQ 330
Query: 759 MPIEPDAMVWRTLLS 773
+ PD W +++
Sbjct: 331 IE-RPDTASWNVIIA 344
Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKI-LKLGFDGEQVLCDKFFNIYLTSG 59
M+ GI+ N TFV +L C G + E K++ + + G + C ++ +G
Sbjct: 565 MKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAG 624
Query: 60 DLDSAMKIFDDMS-KRTVFSWNKLISG 85
L+ A + D+M + V W L+S
Sbjct: 625 RLNEAERFIDEMKLEPDVVVWKTLLSA 651
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/796 (30%), Positives = 431/796 (54%), Gaps = 36/796 (4%)
Query: 113 TFVGVLRACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFN 172
TF +L+AC N++ IHG ++ G+ P I+ L+++Y K GF+D A +VF+
Sbjct: 62 TFPSLLKACSALTNLSYG--KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD 119
Query: 173 N-------LCFKDSVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACT 225
+ +D W +MI G+ + +E + F +M + G P +++S +S
Sbjct: 120 GWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 226 KIELF--EIGEQFHGLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVT- 282
K F E G+Q HG + + +++F+ AL+ +Y + G A ++F +++ + V
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 283 YNSLISGLAQCGYSDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAI 342
+N +I G G + +L+L+ + + +K + + AC+ G Q+H +
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 343 KVGISKDIIVEGSMLDLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQ 402
K+G+ D V S+L +Y KC V A F + + +WN M+ AY + + +
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 403 IFKQMQTEGLTPNQYTYPTILRTCTSLGALSLGEQIHTQL-------------------- 442
+F M+ + + P+ +T ++ C+ LG + G+ +H +L
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 443 --GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEM--ENQGIQSDNIGF 498
G A + + + E D+V+W ++I G ++G F EAL++F +M ++ ++ D+
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 499 SSAISACAGIQALNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDA 558
+S +ACAG++AL G Q+H +G ++ +G++LI LY++CG + A VF +
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 559 KDNISWNGLISGFAQSGYCEGALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQV 618
++ ++WN +IS ++++ E ++ +F+ M G+ + + SV+ A ++ A++ +GK +
Sbjct: 540 ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Query: 619 HAMIIKTGYDSETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYA 678
H ++ G S+T N+LI +Y KCG A+ F +M K+ ++WN MI G+ HG
Sbjct: 600 HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDC 659
Query: 679 LEAINLFEKMKKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYAC 738
+ A++LF++MKK P+ VTF+ ++SAC+H G V EG FE M +YG+ P EHYA
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYAN 719
Query: 739 VVDLLGRAGCLSRAREFTEQMPIEPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPED 798
+VDLLGRAG L A F + MPIE D+ +W LLSA R H N+E+G +A LL +EPE
Sbjct: 720 MVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPER 779
Query: 799 SATYVLLSNIYAAAGKWDCRDQIRQIMKDRGVKKEPGQSWIEVKNSIHAFFVGDRLHPLA 858
+TYV L N+Y AG + ++ +MK++G+ K+PG SWIEV + + FF G P+
Sbjct: 780 GSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMK 839
Query: 859 DKIYDYLGNLNRRVAE 874
+I++ L L + +
Sbjct: 840 AEIFNVLNRLKSNMVD 855
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 194/757 (25%), Positives = 357/757 (47%), Gaps = 38/757 (5%)
Query: 12 TFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDLDSAMKIFDD- 70
TF LL+ C + +L K IHG ++ LG+ + + N+Y+ G LD A+++FD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 71 ------MSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRACIGS 124
+S R V WN +I G+ + +G F +M+ V P+ + V+
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 125 GNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDSVS-WV 183
GN + QIHG ++ + + LID+Y K G A +VF + K +V W
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 184 AMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHGLIFKW 243
MI GF +G ++ L+ + + AL AC++ E G Q H + K
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 244 GFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDKALELF 303
G ++ +VC +L+++YS+ G + AE +FS + + +N++++ A+ Y AL+LF
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 304 EKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSMLDLYVKC 363
M+ + PD T+++++S C+ +G + G+ +H+ K I +E ++L LY KC
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKC 421
Query: 364 SDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQ--TEGLTPNQYTYPT 421
AY F + E +++V W ++ + E+ ++F M+ + L P+ +
Sbjct: 422 GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 422 ILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQEILRRLPEDD 459
+ C L AL G Q+H ++ G A ++ + ++
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTEN 541
Query: 460 VVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHA 519
+V+W +MI + ++ + +++LF M +QGI D++ +S + A + +L +G+ +H
Sbjct: 542 MVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHG 601
Query: 520 QSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISGFAQSGYCEG 579
+ G D + NALI +Y +CG + A +F K+ K I+WN +I G+ G C
Sbjct: 602 YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCIT 661
Query: 580 ALQVFSQMTQVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKT-GYDSETEASNSLI 638
AL +F +M + G + TF S++SA + +++GK + + + G + E +++
Sbjct: 662 ALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Query: 639 TLYAKCGSIDDAKREFLEMP-EKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNH 697
L + G +++A MP E + W +++ H I EK+ + + P
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRME--PER 779
Query: 698 -VTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKP 733
T+V +++ GL NE + M E GL +P
Sbjct: 780 GSTYVQLINLYMEAGLKNEAAKLLGLMK-EKGLHKQP 815
Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/612 (26%), Positives = 289/612 (47%), Gaps = 42/612 (6%)
Query: 186 ISGFSQNGYEREAILLFCQMHILGTVP---TPYAISSALSACTKIELFEIGEQFHGLIFK 242
I Q G +A+ L+ + G+ P + + S L AC+ + G+ HG +
Sbjct: 31 IRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88
Query: 243 WGFSSETFVCNALVTLYSRSGNLTSAEQIF-------SKMQQRDGVTYNSLISGLAQCGY 295
G+ + F+ +LV +Y + G L A Q+F S + RD +NS+I G +
Sbjct: 89 LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRR 148
Query: 296 SDKALELFEKMQLDCLKPDCVTVASLVSACASVGAFRT--GEQLHSYAIKVGISKDIIVE 353
+ + F +M + ++PD +++ +VS G FR G+Q+H + ++ + D ++
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK 208
Query: 354 GSMLDLYVKCSDVETAYKFFLTTETE-NVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGL 412
+++D+Y K A++ F+ E + NVVLWNVM+V +G S ++ + +
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV 268
Query: 413 TPNQYTYPTILRTCTSLGALSLGEQIH----------------------TQLGNLNTAQE 450
++ L C+ G QIH ++ G + A+
Sbjct: 269 KLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 451 ILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQA 510
+ + + + W AM+ + ++ AL+LF M + + D+ S+ IS C+ +
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 511 LNQGRQIHAQSYISGFSDDLSIGNALISLYARCGRIQEAYLVFNKIDAKDNISWNGLISG 570
N G+ +HA+ + +I +AL++LY++CG +AYLVF ++ KD ++W LISG
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISG 448
Query: 571 FAQSGYCEGALQVFSQMT--QVGVQANLYTFGSVVSAAANLANIKQGKQVHAMIIKTGYD 628
++G + AL+VF M ++ + SV +A A L ++ G QVH +IKTG
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV 508
Query: 629 SETEASNSLITLYAKCGSIDDAKREFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKM 688
+SLI LY+KCG + A + F M +N V+WN+MI+ +S++ +I+LF M
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM 568
Query: 689 KKHDVMPNHVTFVGVLSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYA-CVVDLLGRAG 747
+ P+ V+ VL A S + +G + + G +P H ++D+ + G
Sbjct: 569 LSQGIFPDSVSITSVLVAISSTASLLKG-KSLHGYTLRLG-IPSDTHLKNALIDMYVKCG 626
Query: 748 CLSRAREFTEQM 759
A ++M
Sbjct: 627 FSKYAENIFKKM 638
Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 214/441 (48%), Gaps = 8/441 (1%)
Query: 2 EERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGDL 61
+ ++ S +F L C + ++IH ++K+G + +C ++Y G +
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 62 DSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDDVIPNEATFVGVLRAC 121
A +F + + + WN +++ + L LF M V+P+ T V+ C
Sbjct: 324 GEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383
Query: 122 --IGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKDS 179
+G N +H + + I + L+ LY+K G A VF ++ KD
Sbjct: 384 SVLGLYNYG----KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDM 439
Query: 180 VSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYA--ISSALSACTKIELFEIGEQFH 237
V+W ++ISG +NG +EA+ +F M P + ++S +AC +E G Q H
Sbjct: 440 VAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVH 499
Query: 238 GLIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSD 297
G + K G FV ++L+ LYS+ G A ++F+ M + V +NS+IS ++ +
Sbjct: 500 GSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPE 559
Query: 298 KALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIKVGISKDIIVEGSML 357
+++LF M + PD V++ S++ A +S + G+ LH Y +++GI D ++ +++
Sbjct: 560 LSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALI 619
Query: 358 DLYVKCSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQY 417
D+YVKC + A F + ++++ WN+M+ YG D + +F +M+ G +P+
Sbjct: 620 DMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 418 TYPTILRTCTSLGALSLGEQI 438
T+ +++ C G + G+ I
Sbjct: 680 TFLSLISACNHSGFVEEGKNI 700
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 184/394 (46%), Gaps = 6/394 (1%)
Query: 1 MEERGIQANSQTFVWLLEGCLSYGSLLEAKKIHGKILKLGFDGEQVLCDKFFNIYLTSGD 60
M ++ + +S T ++ C G K +H ++ K + +Y G
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 61 LDSAMKIFDDMSKRTVFSWNKLISGFVAKKLSGRVLGLFLQMIDDD--VIPNEATFVGVL 118
A +F M ++ + +W LISG L +F M DDD + P+ V
Sbjct: 424 DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 119 RACIGSGNVAVQCVNQIHGLIISHGFGGSPLISNPLIDLYAKNGFIDSAKKVFNNLCFKD 178
AC +G A++ Q+HG +I G + + + LIDLY+K G + A KVF ++ ++
Sbjct: 484 NAC--AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTEN 541
Query: 179 SVSWVAMISGFSQNGYEREAILLFCQMHILGTVPTPYAISSALSACTKIELFEIGEQFHG 238
V+W +MIS +S+N +I LF M G P +I+S L A + G+ HG
Sbjct: 542 MVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHG 601
Query: 239 LIFKWGFSSETFVCNALVTLYSRSGNLTSAEQIFSKMQQRDGVTYNSLISGLAQCGYSDK 298
+ G S+T + NAL+ +Y + G AE IF KMQ + +T+N +I G G
Sbjct: 602 YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCIT 661
Query: 299 ALELFEKMQLDCLKPDCVTVASLVSACASVGAFRTGEQLHSYAIK-VGISKDIIVEGSML 357
AL LF++M+ PD VT SL+SAC G G+ + + + GI ++ +M+
Sbjct: 662 ALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Query: 358 DLYVKCSDVETAYKFFLTTETE-NVVLWNVMLVA 390
DL + +E AY F E + +W +L A
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 563 SWNGLISGFAQSGYCEGALQVFSQMT-QVGVQANLYTFGSVVSAAANLANIKQGKQVHAM 621
S N I Q G AL ++S+ +++TF S++ A + L N+ GK +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 622 IIKTGYDSETEASNSLITLYAKCGSIDDAKREF-------LEMPEKNEVSWNAMITGFSQ 674
++ G+ + + SL+ +Y KCG +D A + F + ++ WN+MI G+ +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 675 HGYALEAINLFEKMKKHDVMPNHVTFVGVLS 705
E + F +M V P+ + V+S
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVS 176
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 347,669,490
Number of Sequences: 539616
Number of extensions: 14348075
Number of successful extensions: 47885
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 33686
Number of HSP's gapped (non-prelim): 3342
length of query: 968
length of database: 191,569,459
effective HSP length: 127
effective length of query: 841
effective length of database: 123,038,227
effective search space: 103475148907
effective search space used: 103475148907
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)