BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040644
MEAKLLPQTYRTPFISTVLVPRRHRVRIIKPETSCVVAVLARPAETRNAKPKQLERKAEV
VQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVI
QALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVV
HIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASS
DDPAFKQPCYKLCKESRRHTLNDLVAN

High Scoring Gene Products

Symbol, full name Information P value
D27
AT1G03055
protein from Arabidopsis thaliana 7.3e-59
AT1G64680 protein from Arabidopsis thaliana 4.9e-37
AT4G01995 protein from Arabidopsis thaliana 2.1e-29

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040644
        (267 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006097 - symbol:D27 "AT1G03055" species:370...   604  7.3e-59   1
TAIR|locus:2010856 - symbol:AT1G64680 "AT1G64680" species...   398  4.9e-37   1
TAIR|locus:504955232 - symbol:AT4G01995 "AT4G01995" speci...   326  2.1e-29   1


>TAIR|locus:505006097 [details] [associations]
            symbol:D27 "AT1G03055" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009536 "plastid" evidence=IDA]
            [GO:0010223 "secondary shoot formation" evidence=IMP] [GO:1901601
            "strigolactone biosynthetic process" evidence=IGI] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009536 GO:GO:0010223
            UniGene:At.42563 UniGene:At.51465 EMBL:BT010155 IPI:IPI00528297
            RefSeq:NP_563673.1 EnsemblPlants:AT1G03055.1 GeneID:838334
            KEGG:ath:AT1G03055 TAIR:At1g03055 eggNOG:NOG327291
            HOGENOM:HOG000242549 InParanoid:Q7XA78 OMA:SNCVGMC PhylomeDB:Q7XA78
            ProtClustDB:CLSN2687636 Genevestigator:Q7XA78 GO:GO:1901601
            InterPro:IPR025114 Pfam:PF13225 Uniprot:Q7XA78
        Length = 264

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 108/194 (55%), Positives = 151/194 (77%)

Query:    68 DGWFDQIAINHLSQSVQDATGIKNNKGG--YEGMVEAAKAVLRNFDQAQQRAIVIQALER 125
             D +F +IAIN+LS+++QDA GI ++     Y+ +V+ A  V RNFD  QQ   V+ +L+R
Sbjct:    67 DSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFVLSSLDR 126

Query:   126 AFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKC 185
             A P  I ++++   P SK++RE FA+FTTI FAWLVGP EVRE+EVNG+ EK+VV+I+KC
Sbjct:   127 ALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSVVYIEKC 186

Query:   186 RFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAF 245
             RFLE+SNCVGMCT++CK+PSQ FIK+SLGMP+ M P+F+D+SC+M+FG+EP    DDPA 
Sbjct:   187 RFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPEIEDDPAM 246

Query:   246 KQPCYKLCKESRRH 259
             KQPC++ CK ++ +
Sbjct:   247 KQPCFEFCKSNKSY 260


>TAIR|locus:2010856 [details] [associations]
            symbol:AT1G64680 "AT1G64680" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009534 "chloroplast
            thylakoid" evidence=IDA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0016556 "mRNA modification" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941 EMBL:AC009519
            GO:GO:0009534 HOGENOM:HOG000242549 InterPro:IPR025114 Pfam:PF13225
            EMBL:BT010194 EMBL:AK226297 IPI:IPI00535028 PIR:H96669
            RefSeq:NP_564838.1 UniGene:At.28247 STRING:Q9SGU7 PaxDb:Q9SGU7
            PRIDE:Q9SGU7 EnsemblPlants:AT1G64680.1 GeneID:842776
            KEGG:ath:AT1G64680 TAIR:At1g64680 eggNOG:NOG29740 InParanoid:Q9SGU7
            OMA:FMGLFAR PhylomeDB:Q9SGU7 ProtClustDB:CLSN2917382
            Genevestigator:Q9SGU7 Uniprot:Q9SGU7
        Length = 250

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 86/204 (42%), Positives = 117/204 (57%)

Query:    63 KTVYNDGWFDQIAINHLSQSVQDATGIKNNKG----G-----YEGMVEAAKAVLRNFDQA 113
             KT Y DG  +++ +   ++ + D  G K  K     G     YE  VE +K V++   + 
Sbjct:    36 KTRYEDGLVERVFMGLFARKM-DKFGSKKKKDTKEKGFWEYDYESFVEVSKRVMQGRSRV 94

Query:   114 QQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNG 173
             QQ+  V + L    P       R + P +K A EF A  T  FF WLVGP +V E EVNG
Sbjct:    95 QQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSQVIEVEVNG 154

Query:   174 KTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFG 233
               +++ V IKKCR+LE S CVGMC N+CK+P+Q F  +  G+P+ M PN++DMSCEMI+G
Sbjct:   155 VKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDMSCEMIYG 214

Query:   234 QEPLASSDDPAFKQPCYK-LCKES 256
             Q P A  +D A KQPC   +C  S
Sbjct:   215 QAPPAFEEDVATKQPCLADICSMS 238


>TAIR|locus:504955232 [details] [associations]
            symbol:AT4G01995 "AT4G01995" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002687 GenomeReviews:CT486007_GR
            UniGene:At.43223 InterPro:IPR025114 Pfam:PF13225 EMBL:AY062663
            EMBL:AY093324 IPI:IPI00517905 RefSeq:NP_680560.1 UniGene:At.27269
            PRIDE:Q8W4C4 EnsemblPlants:AT4G01995.1 GeneID:828173
            KEGG:ath:AT4G01995 TAIR:At4g01995 eggNOG:NOG298641
            HOGENOM:HOG000012571 InParanoid:Q8W4C4 OMA:CKLPTQT PhylomeDB:Q8W4C4
            ProtClustDB:CLSN2690274 Genevestigator:Q8W4C4 Uniprot:Q8W4C4
        Length = 258

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 73/228 (32%), Positives = 119/228 (52%)

Query:    39 VLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEG 98
             +L R    R +   ++ +  E   K  Y  G  D   +      + +  G  + K GY G
Sbjct:    26 ILTRRLRCRISNSSEV-KSDEGAPKLEYKPGPLDDFFMQSFRNKLVEEVGSDSEKPGYVG 84

Query:    99 MVEAAKAVL-RNFDQAQQRAIVIQALERAFPRPILTMVR---AVLPESKLAREFFAVFTT 154
             ++E  K +L +   +++     ++ L+  FP  IL + +   A + + KLA    A  T 
Sbjct:    85 LIELVKLLLLKGRTRSETSDAAVRILKSLFPPLILELYKLLIAPIAQGKLAALMVARVTV 144

Query:   155 IFFAWLVGPCEVRESEV-NGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSL 213
             +   WL+GP +V   ++ NG++  + V ++KC++LEES CVG+C N CK+P+QTF KD +
Sbjct:   145 LTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYLEESKCVGVCINTCKLPTQTFFKDYM 204

Query:   214 GMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTL 261
             G+P+ M PNF D SC+  FG  P    DD    +PC++ C  + R  L
Sbjct:   205 GVPLVMEPNFKDYSCQFKFGVAP--PEDDGNVNEPCFETCSIAGRRKL 250


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.134   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      267       267   0.00095  114 3  11 22  0.43    33
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  196 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.81u 0.10s 21.91t   Elapsed:  00:00:01
  Total cpu time:  21.81u 0.10s 21.91t   Elapsed:  00:00:01
  Start:  Sat May 11 05:11:44 2013   End:  Sat May 11 05:11:45 2013

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