Query 040644
Match_columns 267
No_of_seqs 95 out of 97
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 16:46:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040644.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040644hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1elka_ a.118.9.2 (A:) Tom1 pr 44.0 27 0.002 26.5 6.6 46 80-127 14-59 (153)
2 d1dvpa1 a.118.9.2 (A:1-145) Hr 41.8 26 0.0019 26.2 6.0 32 79-110 6-37 (145)
3 d1mhqa_ a.118.9.2 (A:) ADP-rib 33.1 69 0.005 23.7 7.3 31 79-109 2-32 (143)
4 d1juqa_ a.118.9.2 (A:) ADP-rib 28.5 79 0.0058 23.7 6.9 46 79-126 3-48 (151)
5 d1ujka_ a.118.9.2 (A:) ADP-rib 27.4 84 0.0061 23.3 6.9 46 80-127 10-55 (145)
6 d1szia_ a.24.23.1 (A:) Mannose 15.3 18 0.0013 30.3 0.4 13 153-165 209-221 (226)
7 d1sopa_ g.71.1.1 (A:) Mini-col 15.1 22 0.0016 20.4 0.6 10 193-202 6-15 (26)
8 d1v54j_ f.23.4.1 (J:) Mitochon 14.7 16 0.0012 24.8 -0.1 20 202-221 4-24 (58)
9 d1xdpa1 a.7.15.1 (A:2-106) Pol 14.1 1.3E+02 0.0093 21.2 5.0 52 70-123 31-83 (105)
10 d1ha9a_ g.3.2.1 (A:) Trypsin i 13.6 25 0.0018 21.4 0.6 17 181-199 11-27 (34)
No 1
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.01 E-value=27 Score=26.48 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=34.3
Q ss_pred HHHHHHHhCCCCCCCchhHHHHHHHHHhccCCHHHHHHHHHHHHHHhC
Q 040644 80 SQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAF 127 (267)
Q Consensus 80 ~rkm~~~~G~~s~k~GYdglVe~a~~lm~~~~~~~q~~~v~~vL~sl~ 127 (267)
.+.+.+++.-....++|+..+|++..|..... ..+++++-+...|.
T Consensus 14 ~~~vekAT~~~l~~~dw~~il~icD~In~~~~--~~k~a~ral~krL~ 59 (153)
T d1elka_ 14 GQRIEKATDGSLQSEDWALNMEICDIINETEE--GPKDALRAVKKRIV 59 (153)
T ss_dssp HHHHHHHTCTTCSSCCHHHHHHHHHHHHHSSS--HHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHHhCCCc--CHHHHHHHHHHHHc
Confidence 45677888888889999999999999986533 34666666666665
No 2
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=41.75 E-value=26 Score=26.19 Aligned_cols=32 Identities=6% Similarity=0.125 Sum_probs=27.4
Q ss_pred HHHHHHHHhCCCCCCCchhHHHHHHHHHhccC
Q 040644 79 LSQSVQDATGIKNNKGGYEGMVEAAKAVLRNF 110 (267)
Q Consensus 79 F~rkm~~~~G~~s~k~GYdglVe~a~~lm~~~ 110 (267)
|-..+.+++.-....++|+.+++++..|..+.
T Consensus 6 ~~~~iekAT~~~~~~~dw~~il~icD~I~~~~ 37 (145)
T d1dvpa1 6 FCKNLENATSHLRLEPDWPSILLICDEINQKD 37 (145)
T ss_dssp HHHHHHHHHCTTCSSCCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHcCcCCCCCCHHHHHHHHHHHhCCC
Confidence 56678889988899999999999999998543
No 3
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.12 E-value=69 Score=23.74 Aligned_cols=31 Identities=13% Similarity=0.132 Sum_probs=25.8
Q ss_pred HHHHHHHHhCCCCCCCchhHHHHHHHHHhcc
Q 040644 79 LSQSVQDATGIKNNKGGYEGMVEAAKAVLRN 109 (267)
Q Consensus 79 F~rkm~~~~G~~s~k~GYdglVe~a~~lm~~ 109 (267)
|-..+.+++.-....++|+++++++..|..+
T Consensus 2 le~liekAT~~~~~~~dw~~il~icD~I~~~ 32 (143)
T d1mhqa_ 2 LELWLNKATDPSMSEQDWSAIQNFCEQVNTD 32 (143)
T ss_dssp HHHHHHHHHCTTCSSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCCCCcCHHHHHHHHHHHHcC
Confidence 3456778888888889999999999999764
No 4
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.48 E-value=79 Score=23.66 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=32.1
Q ss_pred HHHHHHHHhCCCCCCCchhHHHHHHHHHhccCCHHHHHHHHHHHHHHh
Q 040644 79 LSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERA 126 (267)
Q Consensus 79 F~rkm~~~~G~~s~k~GYdglVe~a~~lm~~~~~~~q~~~v~~vL~sl 126 (267)
|-..+.+++--....++|+..+|++..|..... ..+++++-+...|
T Consensus 3 le~~i~kAT~~~l~~~dw~~ileicD~In~~~~--~~k~a~rai~krl 48 (151)
T d1juqa_ 3 LESWLNKATNPSNRQEDWEYIIGFCDQINKELE--GPQIAVRLLAHKI 48 (151)
T ss_dssp HHHHHHHHTCTTCSSCCHHHHHHHHHHHHHSTT--HHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCHHHHHHHHHHHhcCCc--cHHHHHHHHHHHH
Confidence 345677888777888999999999999986533 3445555444444
No 5
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.37 E-value=84 Score=23.34 Aligned_cols=46 Identities=9% Similarity=0.067 Sum_probs=30.0
Q ss_pred HHHHHHHhCCCCCCCchhHHHHHHHHHhccCCHHHHHHHHHHHHHHhC
Q 040644 80 SQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAF 127 (267)
Q Consensus 80 ~rkm~~~~G~~s~k~GYdglVe~a~~lm~~~~~~~q~~~v~~vL~sl~ 127 (267)
-..+.+++--....++++.++|++..|..... ..+++++-+...|-
T Consensus 10 e~~iekAT~~~l~~~dw~~ileicD~I~~~~~--~~k~a~r~l~krl~ 55 (145)
T d1ujka_ 10 EARINRATNPLNKELDWASINGFCEQLNEDFE--GPPLATRLLAHKIQ 55 (145)
T ss_dssp HHHHHHHTCTTCSSCCHHHHHHHHHHHTSSTT--HHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCcCHHHHHHHHHHHhCCCc--cHHHHHHHHHHHHc
Confidence 34566777777778899999999998875432 33445444444443
No 6
>d1szia_ a.24.23.1 (A:) Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.34 E-value=18 Score=30.27 Aligned_cols=13 Identities=38% Similarity=0.721 Sum_probs=9.0
Q ss_pred hhhccccceecee
Q 040644 153 TTIFFAWLVGPCE 165 (267)
Q Consensus 153 T~~~f~WLVGP~e 165 (267)
...=..|||||=-
T Consensus 209 ~ntPL~WLVGPF~ 221 (226)
T d1szia_ 209 QNTPAMWLVGPFA 221 (226)
T ss_dssp TCCCTTCEEEEEE
T ss_pred cCCCcccccCCCc
Confidence 3344689999953
No 7
>d1sopa_ g.71.1.1 (A:) Mini-collagen I, C-terminal domain {Hydra sp. [TaxId: 6086]}
Probab=15.10 E-value=22 Score=20.35 Aligned_cols=10 Identities=40% Similarity=1.152 Sum_probs=6.4
Q ss_pred cccccccccc
Q 040644 193 CVGMCTNLCK 202 (267)
Q Consensus 193 C~GmCvN~CK 202 (267)
|+..|+.+|+
T Consensus 6 cvaqcvptcp 15 (26)
T d1sopa_ 6 CVAQCVPTCP 15 (26)
T ss_dssp TTTCCCTTSC
T ss_pred hhhhccCCCc
Confidence 6666666664
No 8
>d1v54j_ f.23.4.1 (J:) Mitochondrial cytochrome c oxidase subunit VIIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=14.65 E-value=16 Score=24.81 Aligned_cols=20 Identities=20% Similarity=0.556 Sum_probs=16.6
Q ss_pred cCC-chhhhhhhcCCcccccC
Q 040644 202 KMP-SQTFIKDSLGMPVNMVP 221 (267)
Q Consensus 202 KiP-TQ~FF~d~~GlpLtM~P 221 (267)
|+| .|+.|+++=|+|+++.=
T Consensus 4 kv~e~Qk~FQ~~~g~PVhLKG 24 (58)
T d1v54j_ 4 RVAEKQKLFQEDNGLPVHLKG 24 (58)
T ss_dssp CHHHHHHHHHCSSCCCTTTTT
T ss_pred hhHHHHHHhcCCCCceEEecC
Confidence 455 69999999999998763
No 9
>d1xdpa1 a.7.15.1 (A:2-106) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}
Probab=14.09 E-value=1.3e+02 Score=21.23 Aligned_cols=52 Identities=4% Similarity=0.039 Sum_probs=30.0
Q ss_pred HHHHH-HHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHhccCCHHHHHHHHHHHH
Q 040644 70 WFDQI-AINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQAL 123 (267)
Q Consensus 70 ~lD~~-~i~lF~rkm~~~~G~~s~k~GYdglVe~a~~lm~~~~~~~q~~~v~~vL 123 (267)
.++|+ |+++|+..|-|..-+.- .|.-..++.+..--.|.++.+|.+.+....
T Consensus 31 llERlrFl~I~ssNLDEFFmVRV--AgLk~q~~~~~~~~dg~tp~e~L~~I~~~v 83 (105)
T d1xdpa1 31 LIERMRFLGIYSNNLDEFYKVRF--AELKRRIIISEEQGSNSHSRHLLGKIQSRV 83 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHH--HHHHHHHHHHHHHCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHhhH--HHHHHHHHcCCCCCCCCCHHHHHHHHHHHH
Confidence 66777 78888887777653321 122233444444345777877776655443
No 10
>d1ha9a_ g.3.2.1 (A:) Trypsin inhibitor {Spiny bitter cucumber (Momordica cochinchinensis), MCOTI-II [TaxId: 3674]}
Probab=13.60 E-value=25 Score=21.36 Aligned_cols=17 Identities=47% Similarity=1.085 Sum_probs=13.7
Q ss_pred Eeecceeeecccccccccc
Q 040644 181 HIKKCRFLEESNCVGMCTN 199 (267)
Q Consensus 181 ~IeKCRyLEeSgC~GmCvN 199 (267)
.+|||| ..|.|.|-|+-
T Consensus 11 ilkkcr--rdsdc~~~cic 27 (34)
T d1ha9a_ 11 ILKKCR--RDSDCPGACIC 27 (34)
T ss_dssp CCCBCS--SGGGSCTTCCB
T ss_pred HHHHhc--cccCCCcccee
Confidence 368898 68999999974
Done!