Query 040650
Match_columns 136
No_of_seqs 141 out of 1910
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 16:53:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 4.7E-33 1.6E-37 170.1 12.6 121 1-129 8-130 (169)
2 4gpm_A Engineered protein OR26 100.0 6.8E-33 2.3E-37 169.3 11.6 120 1-128 41-162 (169)
3 2jab_A H10-2-G3; HER2, darpin, 100.0 3.5E-31 1.2E-35 156.4 11.5 117 1-125 18-136 (136)
4 1d9s_A Cyclin-dependent kinase 100.0 9.8E-32 3.3E-36 158.8 8.1 118 1-127 16-136 (136)
5 1n0r_A 4ANK, 4 ankyrin repeats 100.0 2.6E-30 8.7E-35 150.3 11.6 119 1-127 6-126 (126)
6 2y1l_E Darpin-8.4; hydrolase-i 100.0 7.3E-30 2.5E-34 155.7 12.4 121 1-129 18-140 (169)
7 1bi7_B P16INK4A, MTS1, multipl 100.0 8.5E-31 2.9E-35 158.0 7.4 122 1-131 16-140 (156)
8 3v31_A Ankyrin repeat family A 100.0 1.5E-29 5.1E-34 153.9 12.6 121 1-129 7-129 (167)
9 1ihb_A P18-INK4C(INK6), cyclin 100.0 8E-30 2.7E-34 154.3 10.4 120 1-129 9-130 (162)
10 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.7E-29 5.8E-34 152.8 11.7 119 1-127 42-162 (162)
11 1awc_B Protein (GA binding pro 100.0 1.6E-29 5.5E-34 151.9 11.4 121 1-130 6-128 (153)
12 3v30_A DNA-binding protein rfx 100.0 7.6E-30 2.6E-34 155.8 10.1 117 2-126 41-159 (172)
13 2rfm_A Putative ankyrin repeat 100.0 2.1E-29 7.2E-34 156.4 11.2 121 1-129 39-161 (192)
14 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.2E-29 1.1E-33 152.8 11.6 117 1-125 51-169 (169)
15 4b93_B Ankyrin repeat domain-c 100.0 2E-29 6.9E-34 164.1 11.2 122 1-130 90-213 (269)
16 3jxi_A Vanilloid receptor-rela 100.0 2.7E-29 9.4E-34 162.2 11.4 127 1-129 97-252 (260)
17 3v30_A DNA-binding protein rfx 100.0 5.3E-29 1.8E-33 152.1 11.5 122 1-130 6-130 (172)
18 3f6q_A Integrin-linked protein 100.0 9.1E-29 3.1E-33 152.0 12.5 122 1-130 9-133 (179)
19 1awc_B Protein (GA binding pro 100.0 8.6E-29 2.9E-33 148.7 11.5 113 1-121 38-152 (153)
20 3twr_A Tankyrase-2; ankyrin re 100.0 1.5E-29 5E-34 153.6 8.1 122 1-130 12-136 (165)
21 2rfm_A Putative ankyrin repeat 100.0 7.2E-29 2.4E-33 154.0 11.4 118 1-126 72-191 (192)
22 2etb_A Transient receptor pote 100.0 9.3E-29 3.2E-33 159.5 12.1 127 1-129 94-248 (256)
23 3twr_A Tankyrase-2; ankyrin re 100.0 1.6E-28 5.5E-33 149.0 12.5 117 1-126 46-164 (165)
24 3v31_A Ankyrin repeat family A 100.0 7.6E-29 2.6E-33 150.8 10.9 121 1-129 40-162 (167)
25 2pnn_A Transient receptor pote 100.0 1.3E-28 4.5E-33 160.1 12.6 127 1-129 105-260 (273)
26 3f6q_A Integrin-linked protein 100.0 3.4E-29 1.2E-33 154.0 8.6 122 1-130 43-166 (179)
27 2vge_A RELA-associated inhibit 100.0 2.3E-29 7.9E-34 160.4 6.6 121 1-129 25-150 (229)
28 3c5r_A BARD-1, BRCA1-associate 100.0 1E-29 3.5E-34 150.2 3.9 120 1-128 14-135 (137)
29 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.3E-28 1.5E-32 145.9 10.9 115 1-124 6-123 (156)
30 3aji_A 26S proteasome non-ATPa 100.0 8.4E-28 2.9E-32 152.7 12.3 120 2-129 78-199 (231)
31 2f8y_A Notch homolog 1, transl 100.0 8.8E-28 3E-32 151.9 12.2 118 2-127 63-183 (223)
32 1ikn_D Protein (I-kappa-B-alph 100.0 8.4E-28 2.9E-32 153.4 12.1 121 1-129 49-178 (236)
33 2dzn_A Probable 26S proteasome 100.0 9.7E-28 3.3E-32 152.1 12.1 121 1-129 76-202 (228)
34 1yyh_A HN1;, notch 1, ankyrin 100.0 8.1E-28 2.8E-32 155.0 11.7 120 2-129 95-217 (253)
35 3aaa_C Myotrophin, protein V-1 100.0 1.8E-28 6.2E-33 142.4 7.6 106 1-114 11-117 (123)
36 1oy3_D Transcription factor in 100.0 1.1E-27 3.7E-32 155.9 12.1 125 1-131 82-254 (282)
37 3ehr_A Osteoclast-stimulating 100.0 1.6E-28 5.5E-33 155.5 7.7 121 1-129 77-200 (222)
38 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.8E-28 6.2E-33 157.0 7.9 120 1-128 41-165 (239)
39 2rfa_A Transient receptor pote 100.0 1.8E-27 6.2E-32 151.3 12.2 121 1-129 7-148 (232)
40 2xai_A ASB-9, ankyrin repeat a 100.0 2E-27 7E-32 153.8 12.5 125 1-127 7-159 (261)
41 2f8y_A Notch homolog 1, transl 100.0 2.8E-27 9.5E-32 149.6 12.6 122 1-130 29-153 (223)
42 1oy3_D Transcription factor in 100.0 1.8E-27 6.1E-32 154.9 12.0 121 1-129 49-219 (282)
43 3aji_A 26S proteasome non-ATPa 100.0 2.2E-27 7.5E-32 150.8 12.1 121 1-129 44-166 (231)
44 2rfa_A Transient receptor pote 100.0 1.7E-27 5.9E-32 151.4 11.5 122 1-128 41-184 (232)
45 1yyh_A HN1;, notch 1, ankyrin 99.9 1.2E-27 4.1E-32 154.2 10.8 122 1-130 61-185 (253)
46 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.3E-27 4.6E-32 143.7 10.2 114 1-124 40-155 (156)
47 3lvq_E ARF-GAP with SH3 domain 99.9 9.4E-28 3.2E-32 167.7 10.7 122 1-130 136-268 (497)
48 1dcq_A PYK2-associated protein 99.9 2.9E-27 9.8E-32 154.6 11.9 124 1-130 134-266 (278)
49 1ikn_D Protein (I-kappa-B-alph 99.9 4E-28 1.4E-32 154.9 7.7 125 1-131 82-213 (236)
50 1s70_B 130 kDa myosin-binding 99.9 3.5E-27 1.2E-31 154.9 12.0 58 65-128 200-258 (299)
51 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.8E-27 6.2E-32 152.4 10.3 121 1-130 9-131 (239)
52 3ljn_A Hypothetical protein; a 99.9 1.1E-27 3.9E-32 161.2 9.8 120 1-128 142-270 (364)
53 2dzn_A Probable 26S proteasome 99.9 5.9E-27 2E-31 148.5 12.0 121 1-127 40-165 (228)
54 3kea_A K1L; tropism, ANK repea 99.9 2.7E-27 9.1E-32 155.1 10.7 119 1-129 35-156 (285)
55 3hra_A Ankyrin repeat family p 99.9 7.7E-27 2.6E-31 145.5 12.1 119 2-128 44-171 (201)
56 3b7b_A Euchromatic histone-lys 99.9 8.1E-27 2.8E-31 148.7 11.9 119 2-128 82-203 (237)
57 1n11_A Ankyrin; clathrin, BAND 99.9 5.1E-27 1.7E-31 161.3 11.6 122 1-130 249-372 (437)
58 3deo_A Signal recognition part 99.9 6.3E-27 2.1E-31 144.4 10.8 105 1-114 48-154 (183)
59 1k1a_A B-cell lymphoma 3-encod 99.9 9.7E-27 3.3E-31 148.5 11.9 120 2-129 84-210 (241)
60 4b93_B Ankyrin repeat domain-c 99.9 5.5E-28 1.9E-32 157.3 6.1 120 1-128 123-245 (269)
61 3hra_A Ankyrin repeat family p 99.9 6.4E-27 2.2E-31 145.8 10.6 117 1-125 76-201 (201)
62 1sw6_A Regulatory protein SWI6 99.9 6.3E-27 2.2E-31 156.0 11.0 128 1-130 135-311 (327)
63 2b0o_E UPLC1; arfgap, structur 99.9 4.5E-27 1.5E-31 155.2 10.1 119 1-127 155-284 (301)
64 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.3E-26 4.4E-31 128.5 10.4 91 31-127 1-93 (93)
65 1wdy_A 2-5A-dependent ribonucl 99.9 1.6E-26 5.3E-31 150.3 12.5 121 1-129 9-132 (285)
66 2etb_A Transient receptor pote 99.9 1.8E-27 6.2E-32 153.4 8.0 122 1-128 47-207 (256)
67 2xai_A ASB-9, ankyrin repeat a 99.9 1.4E-26 4.8E-31 149.8 12.2 120 1-130 73-194 (261)
68 3b7b_A Euchromatic histone-lys 99.9 1.6E-26 5.4E-31 147.3 12.0 119 1-127 15-136 (237)
69 3ui2_A Signal recognition part 99.9 8.4E-27 2.9E-31 149.8 10.6 117 1-126 49-184 (244)
70 3d9h_A CDNA FLJ77766, highly s 99.9 1.7E-26 5.6E-31 151.3 11.8 126 1-128 63-216 (285)
71 3kea_A K1L; tropism, ANK repea 99.9 4E-27 1.4E-31 154.3 8.8 116 1-126 66-185 (285)
72 1wdy_A 2-5A-dependent ribonucl 99.9 1.9E-26 6.4E-31 149.9 11.9 122 1-130 152-281 (285)
73 3jue_A Arfgap with coiled-coil 99.9 1.7E-26 5.9E-31 155.9 11.8 120 1-128 203-327 (368)
74 3utm_A Tankyrase-1; tankyrase, 99.9 2.8E-26 9.4E-31 153.1 12.5 122 1-130 28-152 (351)
75 4hbd_A KN motif and ankyrin re 99.9 5.7E-27 2E-31 153.0 9.0 117 1-125 115-273 (276)
76 3d9h_A CDNA FLJ77766, highly s 99.9 3.4E-26 1.2E-30 149.8 12.6 120 1-130 129-250 (285)
77 3t8k_A Uncharacterized protein 99.9 1.5E-27 5E-32 147.7 5.8 118 1-126 42-178 (186)
78 1k1a_A B-cell lymphoma 3-encod 99.9 3.8E-26 1.3E-30 145.7 12.5 122 1-126 13-140 (241)
79 1n11_A Ankyrin; clathrin, BAND 99.9 2.4E-26 8.3E-31 157.9 12.3 120 1-128 18-139 (437)
80 4hbd_A KN motif and ankyrin re 99.9 1.2E-26 4.2E-31 151.4 9.6 84 1-86 187-272 (276)
81 3utm_A Tankyrase-1; tankyrase, 99.9 9.4E-26 3.2E-30 150.5 12.8 87 1-89 62-149 (351)
82 3ljn_A Hypothetical protein; a 99.9 5.6E-26 1.9E-30 153.0 10.7 119 1-127 24-198 (364)
83 1s70_B 130 kDa myosin-binding 99.9 2.4E-26 8.2E-31 150.9 8.6 121 1-129 44-166 (299)
84 3eu9_A Huntingtin-interacting 99.9 3.5E-25 1.2E-29 140.9 12.4 121 1-129 13-136 (240)
85 2fo1_E LIN-12 protein; beta-ba 99.9 9.1E-26 3.1E-30 152.7 10.0 121 1-127 239-371 (373)
86 3jxi_A Vanilloid receptor-rela 99.9 3.2E-26 1.1E-30 147.8 7.1 122 1-128 50-211 (260)
87 2pnn_A Transient receptor pote 99.9 5.6E-26 1.9E-30 147.7 7.7 122 1-128 58-219 (273)
88 3eu9_A Huntingtin-interacting 99.9 5.2E-25 1.8E-29 140.1 11.9 118 2-127 114-235 (240)
89 4g8k_A 2-5A-dependent ribonucl 99.9 2.8E-25 9.5E-30 148.3 10.0 120 1-128 172-299 (337)
90 2fo1_E LIN-12 protein; beta-ba 99.9 3.6E-25 1.2E-29 149.8 10.1 127 1-129 170-340 (373)
91 3c5r_A BARD-1, BRCA1-associate 99.9 2.4E-24 8.3E-29 127.0 11.0 98 27-130 5-104 (137)
92 3deo_A Signal recognition part 99.9 3.4E-25 1.2E-29 136.6 6.2 121 3-130 6-138 (183)
93 1d9s_A Cyclin-dependent kinase 99.9 1.7E-24 5.8E-29 127.6 8.6 101 21-130 3-106 (136)
94 4g8k_A 2-5A-dependent ribonucl 99.9 4.7E-24 1.6E-28 142.3 11.7 121 1-129 29-152 (337)
95 3t8k_A Uncharacterized protein 99.9 2.1E-25 7.1E-30 138.1 4.0 120 1-130 10-149 (186)
96 2l6b_A NR1C; ankyrin, consensu 99.9 1.3E-24 4.5E-29 124.6 7.1 99 27-131 4-104 (115)
97 2vge_A RELA-associated inhibit 99.9 4.5E-24 1.5E-28 136.0 9.7 112 13-130 1-115 (229)
98 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.2E-24 1.8E-28 117.9 8.2 87 1-89 6-93 (93)
99 3aaa_C Myotrophin, protein V-1 99.9 8.2E-24 2.8E-28 122.6 9.3 97 28-130 3-101 (123)
100 1sw6_A Regulatory protein SWI6 99.9 1.3E-23 4.5E-28 140.0 8.9 117 2-126 102-229 (327)
101 2l6b_A NR1C; ankyrin, consensu 99.9 6.2E-24 2.1E-28 121.8 5.6 99 1-107 13-112 (115)
102 2aja_A Ankyrin repeat family p 99.9 5.5E-25 1.9E-29 149.0 1.3 119 1-126 96-223 (376)
103 2jab_A H10-2-G3; HER2, darpin, 99.9 7.7E-23 2.6E-27 120.5 9.0 96 28-129 10-107 (136)
104 3ui2_A Signal recognition part 99.9 1E-23 3.5E-28 135.4 5.0 94 29-129 42-138 (244)
105 2b0o_E UPLC1; arfgap, structur 99.9 3.1E-23 1.1E-27 136.9 7.3 100 1-114 194-297 (301)
106 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.4E-22 1.2E-26 115.7 10.8 93 31-129 1-95 (126)
107 2zgd_A 3 repeat synthetic anky 99.9 1E-22 3.5E-27 116.0 8.2 89 27-121 19-109 (110)
108 1bi7_B P16INK4A, MTS1, multipl 99.9 8.2E-23 2.8E-27 122.9 7.1 101 1-110 49-151 (156)
109 3ehr_A Osteoclast-stimulating 99.9 2.5E-22 8.4E-27 127.1 8.0 97 28-130 69-168 (222)
110 2aja_A Ankyrin repeat family p 99.8 5.2E-23 1.8E-27 139.3 -1.4 114 1-128 132-251 (376)
111 2zgd_A 3 repeat synthetic anky 99.8 2.8E-20 9.6E-25 105.8 8.1 81 1-83 28-109 (110)
112 1dcq_A PYK2-associated protein 99.8 2.5E-20 8.5E-25 121.8 8.6 87 1-89 173-263 (278)
113 3lvq_E ARF-GAP with SH3 domain 99.8 2.5E-20 8.6E-25 130.3 7.1 87 1-89 175-265 (497)
114 3jue_A Arfgap with coiled-coil 99.8 9.7E-20 3.3E-24 123.0 8.7 120 1-125 239-362 (368)
115 1gp8_A Protein (scaffolding pr 64.8 3.3 0.00011 18.1 1.2 16 2-17 18-33 (40)
116 3zrh_A Ubiquitin thioesterase 30.8 1.4E+02 0.0048 21.0 5.5 24 102-125 68-92 (454)
117 3i71_A Ethanolamine utilizatio 28.0 47 0.0016 16.0 2.0 21 101-121 16-38 (68)
118 3zrh_A Ubiquitin thioesterase 27.5 1.6E+02 0.0055 20.7 7.5 25 63-87 68-92 (454)
119 3eyi_A Z-DNA-binding protein 1 27.3 61 0.0021 16.3 2.4 22 78-114 14-35 (72)
120 3mkq_B Coatomer subunit alpha; 25.5 1.2E+02 0.004 18.3 7.8 19 106-124 121-140 (177)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.7e-33 Score=170.08 Aligned_cols=121 Identities=26% Similarity=0.304 Sum_probs=97.3
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
|+.||+.|+.++|++|++.|++++ ..|..|+||+|+|+..+..+++++| ..+++++.+|..|.||||+|+..|+.++
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn--~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVN--ASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 467888888888888888888887 7788888888888888888888877 7778888777788888888888888888
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++.
T Consensus 86 v~~Ll~~gad------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~ 130 (169)
T 4gpm_A 86 VKLLISKGAD------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN 130 (169)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHCcCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 8888887777 6677777888888888877 888888888777654
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.8e-33 Score=169.35 Aligned_cols=120 Identities=27% Similarity=0.342 Sum_probs=112.7
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..++.+++++|++.|++++ ..|..|+||||+|+..|+.+++++| +.|++++.+|..|+||||+|+..|+.++
T Consensus 41 l~~a~~~~~~~~~~~ll~~gad~~--~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~ 118 (169)
T 4gpm_A 41 LHHAAENGHKEVVKLLISKGADVN--AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 118 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccchh--hhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 578999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
+++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|++.
T Consensus 119 v~~Ll~~gad------~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 119 VKLLISKGAD------VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 9999999998 7799999999999999999 99999999999864
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=3.5e-31 Score=156.41 Aligned_cols=117 Identities=19% Similarity=0.204 Sum_probs=111.9
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|++.|+.+++++|++.|.+++ ..|..|.||||+|+..++.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 18 l~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 95 (136)
T 2jab_A 18 LLEAARAGQDDEVRILMANGADVN--AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEI 95 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999998 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRM 125 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g 125 (136)
+++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|
T Consensus 96 v~~Ll~~g~~------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 96 AEVLLKHGAD------VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCC------CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999998 7799999999999999999 99999999876
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=9.8e-32 Score=158.79 Aligned_cols=118 Identities=14% Similarity=0.087 Sum_probs=113.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCC-CCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSN-DETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~-~~t~l~~a~~~~~~~ 78 (136)
||+|++.|+.+++++|++.|.+++ ..+..|.||||+|+. ++.+++++| ..+++++.+|.. |.||||+|+..++.+
T Consensus 16 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~ 92 (136)
T 1d9s_A 16 LATAAARGQVETVRQLLEAGADPN--ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD 92 (136)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcC--CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 589999999999999999999998 889999999999999 999999999 999999999998 999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
++++|+++|++ ++.+|..|+||||+|+..+ .+++++|+++|++
T Consensus 93 ~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 93 TLVVLHRAGAR------LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCCC------CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999998 7799999999999999999 9999999999974
No 5
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.97 E-value=2.6e-30 Score=150.25 Aligned_cols=119 Identities=34% Similarity=0.444 Sum_probs=114.1
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|++.|+.+++++|++.+.+++ ..+..|.||||+|+..++.+++++| ..+++++.++..|.||||+|+..++.++
T Consensus 6 L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 83 (126)
T 1n0r_A 6 LHLAARNGHLEVVKLLLEAGADVN--AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV 83 (126)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCC--CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHH
Confidence 589999999999999999999988 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
+++|+++|++ ++.+|..|.||+++|+..| .+++++|+++|++
T Consensus 84 ~~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 84 VKLLLEAGAD------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHcCCC------CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999998 7799999999999999999 9999999999974
No 6
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=7.3e-30 Score=155.69 Aligned_cols=121 Identities=25% Similarity=0.316 Sum_probs=114.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
|+.|++.|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++..|..|.||||+|+..++.++
T Consensus 18 l~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 95 (169)
T 2y1l_E 18 LLEAARAGRDDEVRILMANGADVN--AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEI 95 (169)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 478999999999999999999988 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+++.
T Consensus 96 ~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 140 (169)
T 2y1l_E 96 VEVLLKNGAD------VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140 (169)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999998 7799999999999999999 999999999998764
No 7
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=8.5e-31 Score=158.01 Aligned_cols=122 Identities=16% Similarity=0.059 Sum_probs=111.4
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCc-HHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDET-ALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t-~l~~a~~~~~~~ 78 (136)
||+|++.|+.+++++|++.|.+++ ..+..|.||||+|+ .|+.+++++| ..+++++.+|..|.| |||+|+..|+.+
T Consensus 16 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~ 92 (156)
T 1bi7_B 16 LATAAARGRVEEVRALLEAGANPN--APNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD 92 (156)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTT--CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHH
Confidence 589999999999999999999988 88999999999985 9999999999 999999999999999 999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccch
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVSY 131 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~~ 131 (136)
++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++...
T Consensus 93 ~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 93 TLVVLHRAGAR------LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp HHHHHHHHTCC------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred HHHHHHHcCCC------CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 99999999998 7799999999999999999 99999999999876543
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.5e-29 Score=153.87 Aligned_cols=121 Identities=22% Similarity=0.210 Sum_probs=110.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||.|+..|+.+++++|++.+.+++ ..+..|.||||+|+..|+.+++++| ..+++++..+..|.||||+|+..++.++
T Consensus 7 L~~A~~~g~~~~v~~ll~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 84 (167)
T 3v31_A 7 VHQLAAQGEMLYLATRIEQENVIN--HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDI 84 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHHSSCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCcC--CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 588999999999999999988887 8889999999999999999999999 8899999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+++.
T Consensus 85 v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 129 (167)
T 3v31_A 85 VKMLLDCGVD------VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT 129 (167)
T ss_dssp HHHHHHHTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHCCCC------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999988 6788999999999999999 999999999988764
No 9
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=8e-30 Score=154.26 Aligned_cols=120 Identities=22% Similarity=0.215 Sum_probs=88.3
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||.|++.|+.+++++|++.+.+++ ..+..|.||||+|+. |+.+++++| ..+++++.++..|.||||+|+..++.++
T Consensus 9 L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 85 (162)
T 1ihb_A 9 LASAAARGDLEQLTSLLQNNVNVN--AQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT 85 (162)
T ss_dssp HHHHHHHTCHHHHHHHTTSCCCTT--CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcc--ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 466777777777777777777766 667777777777777 777777777 6677777777777777777777777777
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+.++
T Consensus 86 v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 130 (162)
T 1ihb_A 86 LQTLLEFQAD------VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNV 130 (162)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT
T ss_pred HHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCC
Confidence 7777777766 5577777777777777777 777777777776643
No 10
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.7e-29 Score=152.80 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=111.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+. |+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| +.+++++.+|..|.||||+|+..++.++
T Consensus 42 L~~A~~-~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 118 (162)
T 1ihb_A 42 LQVMKL-GNPEIARRLLLRGANPD--LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRV 118 (162)
T ss_dssp HHHCCS-SCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHc-CcHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 578888 99999999999999998 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
+++|+++|++. ++.+|..|.||||+|+..| .+++++|+++|++
T Consensus 119 v~~Ll~~g~~~-----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 119 VEFLVKHTASN-----VGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHSCCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHccCCC-----CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999872 4689999999999999999 9999999999974
No 11
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.6e-29 Score=151.87 Aligned_cols=121 Identities=21% Similarity=0.158 Sum_probs=112.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||.|++.|+.+++++|++.|.+.+ .+..|.||||+|+..|+.+++++| +.+++++.++..|.||||+|+..++.++
T Consensus 6 L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 82 (153)
T 1awc_B 6 LLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANI 82 (153)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHH
Confidence 578999999999999999998775 588899999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
+++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 83 v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 128 (153)
T 1awc_B 83 VEVLLKHGAD------VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT 128 (153)
T ss_dssp HHHHHTTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 9999999988 7799999999999999999 9999999999987643
No 12
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=7.6e-30 Score=155.84 Aligned_cols=117 Identities=17% Similarity=0.211 Sum_probs=59.5
Q ss_pred chhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHH
Q 040650 2 HKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAF 80 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 80 (136)
|+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.+++
T Consensus 41 ~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 118 (172)
T 3v30_A 41 IWASAFGEIETVRFLLEWGADPH--ILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCV 118 (172)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTT--CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCch--hhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 44555555555555555554444 4444555555555555555555555 44555555555555555555555555555
Q ss_pred HHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhcc
Q 040650 81 KILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRML 126 (136)
Q Consensus 81 ~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~ 126 (136)
++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+
T Consensus 119 ~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 119 EALLARGAD------LTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp HHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHcCCC------ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence 555555444 3345555555555555555 555555555544
No 13
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=2.1e-29 Score=156.38 Aligned_cols=121 Identities=16% Similarity=0.063 Sum_probs=107.0
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.+.+++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 39 L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 116 (192)
T 2rfm_A 39 LMVACMLGMENAIDKLVENFDKLE--DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEM 116 (192)
T ss_dssp HHHHHHHTCGGGHHHHHHHHCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHhccccc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHH
Confidence 578899999999999999888887 7888899999999999999999998 8888888888889999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+++.
T Consensus 117 v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 161 (192)
T 2rfm_A 117 SYFLLEHGAN------VNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS 161 (192)
T ss_dssp HHHHHHTTCC------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9999998888 6688889999999999998 999999999887654
No 14
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=3.2e-29 Score=152.84 Aligned_cols=117 Identities=23% Similarity=0.262 Sum_probs=111.8
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| +.+++++.+|..|.||||+|+..++.++
T Consensus 51 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 128 (169)
T 2y1l_E 51 LHLAAFNGHLEIVEVLLKNGADVN--AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEI 128 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999998 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRM 125 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g 125 (136)
+++|+++|++ ++.+|..|.||+++|+..| .+++++|++.|
T Consensus 129 v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 129 VEVLLKNGAD------VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHcCCC------CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999998 7799999999999999999 99999999876
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=2e-29 Score=164.08 Aligned_cols=122 Identities=24% Similarity=0.354 Sum_probs=115.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.+++++ ..+..|.||+|+|+..++.+++++| ..+++++.+|..|.||||+|+..|+.++
T Consensus 90 Lh~A~~~g~~~~v~~Ll~~~a~~~--~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~ 167 (269)
T 4b93_B 90 LHVAALHGRADLIPLLLKHGANAG--ARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHEL 167 (269)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGG
T ss_pred HHHHHHcCcHHHHHHHHhcCCCcC--ccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 589999999999999999999988 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
+++|+++|++ ++.++..|+||||+|+..| .+++++|+++|+++..
T Consensus 168 v~~Ll~~gad------vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 168 VALLLQHGAS------INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHCCCC------CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 9999999998 7799999999999999999 9999999999987653
No 16
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=2.7e-29 Score=162.21 Aligned_cols=127 Identities=17% Similarity=0.155 Sum_probs=113.9
Q ss_pred CchhhhcCChhhhhHhhccCCCCCccccc--------------CCCCcHHHHHHHcCChhhHHHh-h---cccCccccCC
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVED--------------NGLMTPLHRAAVDGDGGVITEI-A---SSESLAKLTS 62 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~--------------~~g~~~l~~a~~~~~~~~~~~l-~---~~~~~~~~~~ 62 (136)
||+|+..|+.+++++|++.|++++ ..+ ..|.||||+|+..|+.+++++| . .+++++.+|.
T Consensus 97 L~~A~~~g~~~~v~~Ll~~ga~~~--~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~ 174 (260)
T 3jxi_A 97 LHIAIERRCKHYVELLVEKGADVH--AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDS 174 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcC--ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCC
Confidence 689999999999999999999998 777 6899999999999999999999 8 8999999999
Q ss_pred CCCcHHHHHHHhCC---------HHHHHHHHHHhhhcc-hhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 63 NDETALILAVKNSQ---------IDAFKILMEETKRHN-LEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 63 ~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~-~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
.|.||||+|+..++ .+++++|+++|++++ .....+.+|..|+||||+|+..| .+++++|+++|+.+.
T Consensus 175 ~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 175 RGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp TSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 99999999999888 799999999999832 00001679999999999999999 999999999998654
No 17
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=5.3e-29 Score=152.10 Aligned_cols=122 Identities=20% Similarity=0.170 Sum_probs=114.8
Q ss_pred CchhhhcCChhhhhHhhccCCC-CCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLE-SRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||.|+..|+.+++++|++.+.. ++ ..+..|.||||+|+..|+.+++++| +.+++++.++..|.||||+|+..++.+
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 6 IHQLAAQGELDQLKEHLRKGDNLVN--KPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTCSGGGG--CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCccccc--CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 5899999999999999999877 55 8899999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 84 ~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 84 IVGLLLERDVD------INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp HHHHHHTTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 99999999998 7799999999999999999 9999999999987643
No 18
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=9.1e-29 Score=152.03 Aligned_cols=122 Identities=20% Similarity=0.244 Sum_probs=107.5
Q ss_pred CchhhhcCChhhhhHhhccC-CCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLD-LESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||.||..|+.+++++|++.+ .+++ ..+..|.||||+|+..|+.+++++| ..+++++.++..|.||||+|+..++.+
T Consensus 9 l~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 86 (179)
T 3f6q_A 9 IFTQCREGNAVAVRLWLDNTENDLN--QGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRD 86 (179)
T ss_dssp HHHHHHHTCHHHHHHHHHCTTSCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHhcCccccc--ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 47889999999999999874 4555 7888999999999999999999999 889999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
++++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+++..
T Consensus 87 ~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 87 IVQKLLQYKAD------INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred HHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 99999999888 6788999999999999999 9999999999887543
No 19
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=8.6e-29 Score=148.67 Aligned_cols=113 Identities=18% Similarity=0.191 Sum_probs=108.7
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 38 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 115 (153)
T 1awc_B 38 LHLAAQYGHFSTTEVLLRAGVSRD--ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV 115 (153)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTT--CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHH
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKIL 121 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~L 121 (136)
+++|+++|++ ++.+|..|.||+|+|+..| .+++++|
T Consensus 116 v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 116 VELLIKYGAD------VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999998 7799999999999999999 9999987
No 20
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.5e-29 Score=153.63 Aligned_cols=122 Identities=20% Similarity=0.163 Sum_probs=110.3
Q ss_pred CchhhhcCChhhhhHhhccCC-CCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDL-ESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||.|++.|+.+++++|++.+. ... ..+..|.||||+|+..|+.+++++| +.+++++.+|..|.||||+|+..++.+
T Consensus 12 l~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 89 (165)
T 3twr_A 12 LLEAAKAGDVETVKKLCTVQSVNCR--DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYE 89 (165)
T ss_dssp HHHHHHHTCHHHHHHHCCTTTTTCC--CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCcc--ccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHH
Confidence 578999999999999998543 444 7788899999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 90 ~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 90 VAELLVKHGAV------VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp HHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhCCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999998 7789999999999999999 9999999999987653
No 21
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=7.2e-29 Score=153.98 Aligned_cols=118 Identities=20% Similarity=0.106 Sum_probs=113.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..++.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 72 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 149 (192)
T 2rfm_A 72 LIWAVKNNRLGIAEKLLSKGSNVN--TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEI 149 (192)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRML 126 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~ 126 (136)
+++|+++|++ ++.+|..|.||+++|+..| .+++++|+++|.
T Consensus 150 v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 150 VKKLLELGAD------ISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191 (192)
T ss_dssp HHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHCCCC------CCCcCCCCCCHHHHHHHhCcHHHHHHHHhccC
Confidence 9999999998 7799999999999999999 999999999873
No 22
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=9.3e-29 Score=159.46 Aligned_cols=127 Identities=20% Similarity=0.207 Sum_probs=113.4
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCC-------------CCcHHHHHHHcCChhhHHHh-h---cccCccccCCC
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNG-------------LMTPLHRAAVDGDGGVITEI-A---SSESLAKLTSN 63 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-------------g~~~l~~a~~~~~~~~~~~l-~---~~~~~~~~~~~ 63 (136)
||+|+..|+.+++++|++.|++++ ..+.. |.||||+|+..|+.+++++| + .+++++.+|..
T Consensus 94 L~~A~~~g~~~~v~~Ll~~ga~~~--~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~ 171 (256)
T 2etb_A 94 LHIAIEKRSLQCVKLLVENGADVH--LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSL 171 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCC
Confidence 589999999999999999999998 77765 99999999999999999999 8 99999999999
Q ss_pred CCcHHHHHHH--hCCHH-------HHHHHHHHhhhcchh-hhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 64 DETALILAVK--NSQID-------AFKILMEETKRHNLE-HLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 64 ~~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~~~~-~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
|.||||+|+. .++.+ ++++|+++|++++.. .+.+.+|..|+||||+|+..| .+++++|+++|+.+.
T Consensus 172 g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 172 GNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 9999999999 77888 999999999993100 000789999999999999999 999999999997654
No 23
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.6e-28 Score=149.03 Aligned_cols=117 Identities=20% Similarity=0.187 Sum_probs=110.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 46 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 123 (165)
T 3twr_A 46 LHFAAGYNRVSVVEYLLQHGADVH--AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEI 123 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcChHHHHHHHHhcCCCCC--ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRML 126 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~ 126 (136)
+++|+++|++ ++.+|..|.||+|+|+. + .+++++|+++|+
T Consensus 124 v~~Ll~~ga~------~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 124 CKLLLQHGAD------PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHcCCC------CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999998 77999999999999877 7 999999999986
No 24
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=7.6e-29 Score=150.75 Aligned_cols=121 Identities=19% Similarity=0.242 Sum_probs=114.9
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 40 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 117 (167)
T 3v31_A 40 LMWAAAHGQIAVVEFLLQNGADPQ--LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKC 117 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCC--CcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999998 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.+|..|.||+++|+..| .+++++|+++++...
T Consensus 118 v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 118 VKMLLESGAD------PTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999998 6799999999999999999 999999999986543
No 25
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=1.3e-28 Score=160.13 Aligned_cols=127 Identities=17% Similarity=0.159 Sum_probs=112.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccC--------------CCCcHHHHHHHcCChhhHHHh-h---cccCccccCC
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDN--------------GLMTPLHRAAVDGDGGVITEI-A---SSESLAKLTS 62 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--------------~g~~~l~~a~~~~~~~~~~~l-~---~~~~~~~~~~ 62 (136)
||+|+..|+.+++++|++.|++++ ..+. .|.||||+|+..|+.+++++| + .+++++.+|.
T Consensus 105 L~~A~~~g~~~~v~~Ll~~ga~~~--~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~ 182 (273)
T 2pnn_A 105 LHIAIERRNMTLVTLLVENGADVQ--AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDS 182 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcC--ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCC
Confidence 689999999999999999999998 7776 799999999999999999999 8 8999999999
Q ss_pred CCCcHHHHHHHhCC---------HHHHHHHHHHhhhcc-hhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 63 NDETALILAVKNSQ---------IDAFKILMEETKRHN-LEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 63 ~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~-~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
.|.||||+|+..++ .+++++|+++|++++ ....++.+|..|+||||+|+..| .+++++|+++|+.+.
T Consensus 183 ~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp 260 (273)
T 2pnn_A 183 VGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP 260 (273)
T ss_dssp TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--
T ss_pred CCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCc
Confidence 99999999999998 799999999999832 00001358999999999999999 999999999999433
No 26
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=3.4e-29 Score=153.96 Aligned_cols=122 Identities=20% Similarity=0.127 Sum_probs=116.8
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 43 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 120 (179)
T 3f6q_A 43 LHWACREGRSAVVEMLIMRGARIN--VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQV 120 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
+++|+++|++ ++.+|..|.||+++|+..+ .+++++|+++|+.+..
T Consensus 121 v~~Ll~~ga~------~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 121 AEDLVANGAL------VSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp HHHHHHTTCC------SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHCCCC------cchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 9999999998 7799999999999999999 9999999999988764
No 27
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=160.41 Aligned_cols=121 Identities=16% Similarity=0.067 Sum_probs=114.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|++++ ..|..|+||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..|+.++
T Consensus 25 L~~A~~~g~~~~v~~Ll~~g~~~~--~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~ 102 (229)
T 2vge_A 25 LLDAALTGELEVVQQAVKEMNDPS--QPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVI 102 (229)
T ss_dssp HHHHHHHTCHHHHHHHHHHSSCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 588999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccc-cCCChHHHHH--HhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATD-KEGNSILHLA--ALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~-~~~~t~l~~a--~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.++ ..|+||||+| +..| .+++++|+++|+++.
T Consensus 103 v~~Ll~~ga~------~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~ 150 (229)
T 2vge_A 103 CMALVQHGAA------IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMG 150 (229)
T ss_dssp HHHHHTTTCC------TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCC------cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc
Confidence 9999999998 66876 6999999999 8999 999999999998654
No 28
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.96 E-value=1e-29 Score=150.20 Aligned_cols=120 Identities=20% Similarity=0.203 Sum_probs=107.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 14 L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 91 (137)
T 3c5r_A 14 LHIASIKGDIPSVEYLLQNGSDPN--VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDI 91 (137)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSC--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999988 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
+++|+++|++ ++.+|..|.||+++|+..+ .+++++|.+.+..+
T Consensus 92 v~~Ll~~ga~------~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~ 135 (137)
T 3c5r_A 92 VKLLLSYGAS------RNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135 (137)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred HHHHHHcCCC------CCCCCCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence 9999999998 7799999999999999999 99999888877654
No 29
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=4.3e-28 Score=145.86 Aligned_cols=115 Identities=20% Similarity=0.191 Sum_probs=90.8
Q ss_pred CchhhhcCChhhhhHhhcc-CCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKL-DLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||.|+..|+.+++++|++. +.+++ ..+..|.||||+ +..|+.+++++| +.+++++.+|..|.||||+|+..|+.+
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 82 (156)
T 1bd8_A 6 LSGAAARGDVQEVRRLLHRELVHPD--ALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD 82 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCCTT--CCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHhCCHHHHHHHHHhhCcCcc--ccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 4678888888888888877 22444 777788888888 778888888888 778888888888888888888888888
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHh
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLR 124 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~ 124 (136)
++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++
T Consensus 83 ~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 83 TLKVLVEHGAD------VNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp HHHHHHHTTCC------SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHHcCCC------CCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 88888888777 6677888888888888888 8888888877
No 30
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=8.4e-28 Score=152.71 Aligned_cols=120 Identities=23% Similarity=0.212 Sum_probs=71.4
Q ss_pred chhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHH
Q 040650 2 HKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAF 80 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 80 (136)
|+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..++.+++++| ..+++++.++..|.||||+|+..|+.+++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 155 (231)
T 3aji_A 78 HIAASAGXDEIVKALLVKGAHVN--AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHcCHHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 45555555555555555555554 4455555555555555555555555 55555555555555555555555555555
Q ss_pred HHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 81 KILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 81 ~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++.
T Consensus 156 ~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 156 HILLFYKAS------TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHhcCCC------ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 555555555 5566777777777777777 777777777776553
No 31
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=8.8e-28 Score=151.88 Aligned_cols=118 Identities=19% Similarity=0.196 Sum_probs=60.2
Q ss_pred chhhhcCChhhhhHhhccCC-CCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 2 HKALVEGDGEVVHFLGKLDL-ESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
|+|+..++.+++++|++.++ +++ ..+..|.||||+|+..++.+++++| ..+++++.++..|.||||+|+..++.++
T Consensus 63 ~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 140 (223)
T 2f8y_A 63 HAAVSADAQGVFQILIRNRATDLD--ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDA 140 (223)
T ss_dssp HHHHHTTCHHHHHHHHHBTTSCTT--CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcc--cCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHH
Confidence 44555555555555555443 333 4444555555555555555555555 5455555555555555555555555555
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
+++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|++
T Consensus 141 v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 183 (223)
T 2f8y_A 141 AVVLLKNGAN------KDMQNNREETPLFLAAREGSYETAKVLLDHFAN 183 (223)
T ss_dssp HHHHHHTTCC------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCCC------CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5555555544 3344555555555555555 5555555555543
No 32
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=8.4e-28 Score=153.36 Aligned_cols=121 Identities=22% Similarity=0.214 Sum_probs=91.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccC------ccccCCCCCcHHHHHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSES------LAKLTSNDETALILAVK 73 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~------~~~~~~~~~t~l~~a~~ 73 (136)
||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..+.. ++..+..|.||||+|+.
T Consensus 49 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 126 (236)
T 1ikn_D 49 LHLAVITNQPEIAEALLGAGCDPE--LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 126 (236)
T ss_dssp HHHHHHTTCHHHHHCCCSCCCCSC--CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHH
Confidence 467777888888888888777777 7777778888888888888887777 55543 45566677788888888
Q ss_pred hCCHHHHHHHHHHhhhcchhhhhccccc-CCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 74 NSQIDAFKILMEETKRHNLEHLFSATDK-EGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 74 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
.|+.+++++|+++|++ ++.++. .|.||||+|+..| .+++++|+++|+++.
T Consensus 127 ~~~~~~v~~Ll~~g~~------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 127 HGYLGIVELLVSLGAD------VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp TTCHHHHHHHHHHTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC
T ss_pred cCCHHHHHHHHHcCCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 8888888888877777 557776 7888888888888 888888888877654
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=9.7e-28 Score=152.07 Aligned_cols=121 Identities=19% Similarity=0.007 Sum_probs=85.8
Q ss_pred CchhhhcCChhhhhHhhccC--CCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCH
Q 040650 1 MHKALVEGDGEVVHFLGKLD--LESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQI 77 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~ 77 (136)
||+|+..|+.+++++|++.| .+++ ..+..|.||||+|+..|+.+++++| +.+++++.++..|.||||+|+..|+.
T Consensus 76 L~~A~~~~~~~~~~~Ll~~g~~~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 153 (228)
T 2dzn_A 76 FHIACSVGNLEVVKSLYDRPLKPDLN--KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153 (228)
T ss_dssp HHHHHHHCCHHHHHHHHSSSSCCCTT--CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcccc--cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 46677777777777777766 4444 6666777777777777777777777 66777777777777777777777777
Q ss_pred HHHHHHHHHh-hhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHH-HhccCcc
Q 040650 78 DAFKILMEET-KRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILM-LRMLYPV 129 (136)
Q Consensus 78 ~~~~~Ll~~~-~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll-~~g~~~~ 129 (136)
+++++|++.| ++ ++.+|..|+||||+|+..| .+++++|+ +.|+++.
T Consensus 154 ~~v~~Ll~~g~~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 154 KLIELLCGLGKSA------VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp HHHHHHHTTTCCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC
T ss_pred HHHHHHHhcCccc------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 7777777776 55 5577777777777777777 77777777 6676554
No 34
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=8.1e-28 Score=155.01 Aligned_cols=120 Identities=19% Similarity=0.182 Sum_probs=76.9
Q ss_pred chhhhcCChhhhhHhhccCC-CCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 2 HKALVEGDGEVVHFLGKLDL-ESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
|+|+..|+.+++++|++.+. +++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..|+.++
T Consensus 95 ~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 172 (253)
T 1yyh_A 95 HAAVSADAQGVFQILIRNRATDLD--ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDA 172 (253)
T ss_dssp HHHHHHTCHHHHHHHHHSTTSCTT--CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcc--ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 55555555555555555554 444 5555566666666666666666666 6666666666666667777666666666
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+++.
T Consensus 173 v~~Ll~~ga~------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 173 AVVLLKNGAN------KDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCC------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 6766666666 5566777777777777777 777777777776543
No 35
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=1.8e-28 Score=142.39 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=100.1
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.+.+++ ..+..|+||||+|+..++.+++++| +.+++++.+|..|.||||+|+..++.++
T Consensus 11 l~~A~~~~~~~~v~~ll~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~ 88 (123)
T 3aaa_C 11 FMWALKNGDLDEVKDYVAKGEDVN--RTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSC 88 (123)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcC--ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999988 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK 114 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~ 114 (136)
+++|+++|++ ++.+|..|+||+|+|...+
T Consensus 89 v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 89 VKLLLSKGAD------KTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHCCCHH
T ss_pred HHHHHHcCCC------CCCcCCCCCCHHHHhCCHH
Confidence 9999999998 7799999999999995544
No 36
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=1.1e-27 Score=155.88 Aligned_cols=125 Identities=20% Similarity=0.162 Sum_probs=112.6
Q ss_pred CchhhhcCChhhhhHhhccCCCC---------------------------------------------CcccccCCCCcH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLES---------------------------------------------RPVVEDNGLMTP 35 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~---------------------------------------------~~~~~~~~g~~~ 35 (136)
||+|+..++.+++++|++.++.. +++..+..|.||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 58899999999999999977551 112678899999
Q ss_pred HHHHHHcCChhhHHHh-hcccCccccCC-CCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhc
Q 040650 36 LHRAAVDGDGGVITEI-ASSESLAKLTS-NDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALN 113 (136)
Q Consensus 36 l~~a~~~~~~~~~~~l-~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~ 113 (136)
||+|+..|+.+++++| ..+++++.++. .|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad------~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD------PTARMYGGRTPLGSALLR 235 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHTS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC------CcccccCCCCHHHHHHHc
Confidence 9999999999999999 99999999885 499999999999999999999999998 779999999999999999
Q ss_pred C-HHHHHHHHHhccCccch
Q 040650 114 K-LIVVKILMLRMLYPVSY 131 (136)
Q Consensus 114 ~-~~~~~~Ll~~g~~~~~~ 131 (136)
| .+++++|+++|+++...
T Consensus 236 ~~~~~v~~Ll~~ga~~~~~ 254 (282)
T 1oy3_D 236 PNPILARLLRAHGAPEPED 254 (282)
T ss_dssp SCHHHHHHHHHTTCCCCCC
T ss_pred CCcHHHHHHHHcCCCcCcC
Confidence 9 99999999999986543
No 37
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=1.6e-28 Score=155.54 Aligned_cols=121 Identities=16% Similarity=0.081 Sum_probs=106.9
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hc-ccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-AS-SESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~-~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||+|+..|+.+++++|++.|.+++ ..|..|+||||+|+..|+.+++++| .. +++++.+|..|.||||+|+..|+.+
T Consensus 77 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~ 154 (222)
T 3ehr_A 77 LHEAAKRGNLSWLRECLDNRVGVN--GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYAD 154 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHH
T ss_pred cccccccCcHHHHHHHHhCCCCcc--ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHH
Confidence 589999999999999999999988 8999999999999999999999999 76 9999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
++++|+++|++ ++.+|..|.|||++|+..+ .++++.|++.|+...
T Consensus 155 ~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 155 IVQLLLAKGAR------TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHHHHHHHTCC------SCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HHHHHHHcCCC------CccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 99999999998 7799999999999999999 999999999998764
No 38
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.8e-28 Score=157.00 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=75.0
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||.|+..|+.+++++|++.|++++ ..|..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..|+.++
T Consensus 41 L~~A~~~g~~~~v~~Ll~~g~~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~ 118 (239)
T 1ycs_B 41 LLDSSLEGEFDLVQRIIYEVDDPS--LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV 118 (239)
T ss_dssp HHHHHHHTCHHHHHHHTSTTSSCC--CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 355666666666666666666555 5566666666666666666666666 6666666666666666666666666666
Q ss_pred HHHHHHHhhhcchhhhhcccccCCC-hHHHHH--HhcC-HHHHHHHHHhccCc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGN-SILHLA--ALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~-t~l~~a--~~~~-~~~~~~Ll~~g~~~ 128 (136)
+++|+++|++ ++.++..|. ||+|+| +..| .+++++|+++|+.+
T Consensus 119 v~~Ll~~ga~------~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~ 165 (239)
T 1ycs_B 119 CKFLVESGAA------VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 165 (239)
T ss_dssp HHHHHHTTCC------TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHT
T ss_pred HHHHHHcCCC------cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcc
Confidence 6666666665 445555554 666666 4555 66666666666543
No 39
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.8e-27 Score=151.33 Aligned_cols=121 Identities=22% Similarity=0.150 Sum_probs=89.5
Q ss_pred CchhhhcCChhhhhHhhcc-CCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCc-----cccCCCCCcHHHHHHH
Q 040650 1 MHKALVEGDGEVVHFLGKL-DLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESL-----AKLTSNDETALILAVK 73 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~-----~~~~~~~~t~l~~a~~ 73 (136)
||+|++.|+.+++++|++. +.+++ ..|..|+||||+|+..|+.+++++| ..++++ +..|..|.||||+|+.
T Consensus 7 L~~A~~~g~~~~v~~Ll~~~g~~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~ 84 (232)
T 2rfa_A 7 LLLAAKENDVQALSKLLKFEGCEVH--QRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVI 84 (232)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCSCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCcc--cCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHH
Confidence 4778888888888888876 77776 7777788888888888888888877 666655 4556677788888888
Q ss_pred hCCHHHHHHHHHHhhhcchhhhhccccc-------------CCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 74 NSQIDAFKILMEETKRHNLEHLFSATDK-------------EGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 74 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-------------~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
.|+.+++++|+++|++ ++.++. .|.||||+|+..| .+++++|+++|+++.
T Consensus 85 ~~~~~~v~~Ll~~g~~------~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 148 (232)
T 2rfa_A 85 NQNVNLVRALLARGAS------VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR 148 (232)
T ss_dssp TTCHHHHHHHHHTTCC------TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCCHHHHHHHHhCCCC------CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 8888888888877776 334433 6777777777777 777777777776543
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=2e-27 Score=153.80 Aligned_cols=125 Identities=18% Similarity=0.173 Sum_probs=83.0
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| +.+++++.+|..|.||||+|+..|+.++
T Consensus 7 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 84 (261)
T 2xai_A 7 MHEAAIHGHQLSLRNLISQGWAVN--IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDC 84 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSS--CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 467777777777777777777776 6777777777777777777777777 7777777777777777777777777777
Q ss_pred HHHHHHHhhhcc--------------------------hhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 80 FKILMEETKRHN--------------------------LEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 80 ~~~Ll~~~~~~~--------------------------~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
+++|+++|++.+ ....++.+|..|.||||+|+..| .+++++|+++|++
T Consensus 85 v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 159 (261)
T 2xai_A 85 VNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD 159 (261)
T ss_dssp HHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 777777766532 11113445555555555555555 5555555555544
No 41
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=2.8e-27 Score=149.59 Aligned_cols=122 Identities=23% Similarity=0.230 Sum_probs=114.1
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hccc-CccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSE-SLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~-~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+. .++..+..|.||||+|+..++.+
T Consensus 29 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 106 (223)
T 2f8y_A 29 LHLAARYSRSDAAKRLLEASADAN--IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 106 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHH
Confidence 589999999999999999999998 8899999999999999999999999 6665 88888999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
++++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+++..
T Consensus 107 ~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 153 (223)
T 2f8y_A 107 MLEDLINSHAD------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM 153 (223)
T ss_dssp HHHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCC------CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999998 7799999999999999999 9999999999987543
No 42
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=1.8e-27 Score=154.87 Aligned_cols=121 Identities=21% Similarity=0.237 Sum_probs=82.1
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccC-----------------------
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSES----------------------- 56 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~----------------------- 56 (136)
||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..++.
T Consensus 49 L~~A~~~g~~~~v~~Ll~~ga~~~--~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (282)
T 1oy3_D 49 LHLAAILGEASTVEKLYAAGAGVL--VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHA 126 (282)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSS--CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcc
Confidence 466666666777776666666666 6666666777777766676666666 44332
Q ss_pred ------------------------ccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccC-CChHHHHHH
Q 040650 57 ------------------------LAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKE-GNSILHLAA 111 (136)
Q Consensus 57 ------------------------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~-~~t~l~~a~ 111 (136)
++.++..|.||||+|+..|+.+++++|+++|++ ++.++.. |+||||+|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~~g~tpL~~A~ 200 (282)
T 1oy3_D 127 PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD------LNKPEPTCGRTPLHLAV 200 (282)
T ss_dssp -----------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTTCCCHHHHHH
T ss_pred hhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCcCHHHHHH
Confidence 445556677777777777777777777777766 5566643 777777777
Q ss_pred hcC-HHHHHHHHHhccCcc
Q 040650 112 LNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 112 ~~~-~~~~~~Ll~~g~~~~ 129 (136)
..| .+++++|+++|+++.
T Consensus 201 ~~~~~~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 201 EAQAASVLELLLKAGADPT 219 (282)
T ss_dssp HTTCHHHHHHHHHTTCCTT
T ss_pred HcCCHHHHHHHHHcCCCCc
Confidence 777 777777777776654
No 43
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=2.2e-27 Score=150.78 Aligned_cols=121 Identities=25% Similarity=0.322 Sum_probs=97.6
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.++..|.||||+|+..++.++
T Consensus 44 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 121 (231)
T 3aji_A 44 LHWACSAGHTEIVEFLLQLGVPVN--DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEI 121 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSC--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCcHHHHHHHHHhCCCCC--CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 467888888888888888887777 7777888888888888888888888 7778888778788888888888888888
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.++..|.||||+|+..| .+++++|+++|+.+.
T Consensus 122 ~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 166 (231)
T 3aji_A 122 AVMLLEGGAN------PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166 (231)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHcCCC------CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Confidence 8888888777 5577888888888888888 888888888877554
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.7e-27 Score=151.42 Aligned_cols=122 Identities=20% Similarity=0.193 Sum_probs=111.0
Q ss_pred CchhhhcCChhhhhHhhccCCCCC---cccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCC-------------C
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESR---PVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTS-------------N 63 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~---~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~-------------~ 63 (136)
||+|+..|+.+++++|++.++++. ....|..|.||||+|+..|+.+++++| +.+++++..+. .
T Consensus 41 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~ 120 (232)
T 2rfa_A 41 LHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYY 120 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccC
Confidence 589999999999999999988762 015677999999999999999999999 88999888765 7
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHH----HHHHHhccCc
Q 040650 64 DETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVV----KILMLRMLYP 128 (136)
Q Consensus 64 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~----~~Ll~~g~~~ 128 (136)
|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..| .+++ ++|+++|+.+
T Consensus 121 g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 121 GEHPLSFAACVGSEEIVRLLIEHGAD------IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp CSSHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 99999999999999999999999998 7799999999999999999 8888 9999999865
No 45
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=1.2e-27 Score=154.19 Aligned_cols=122 Identities=23% Similarity=0.230 Sum_probs=114.0
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hccc-CccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSE-SLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~-~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..+. +++.++..|.||||+|+..++.+
T Consensus 61 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 138 (253)
T 1yyh_A 61 LHLAARYSRSDAAKRLLEASADAN--IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 138 (253)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHH
Confidence 589999999999999999999998 8899999999999999999999999 7665 88999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 139 ~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 185 (253)
T 1yyh_A 139 MLEDLINSHAD------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM 185 (253)
T ss_dssp HHHHHHHTTCC------TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999998 7799999999999999999 9999999999987643
No 46
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.3e-27 Score=143.71 Aligned_cols=114 Identities=20% Similarity=0.214 Sum_probs=108.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+ +..|+.+++++|++.|.+++ ..|..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..|+.++
T Consensus 40 L~~-~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 116 (156)
T 1bd8_A 40 LQV-MMFGSTAIALELLKQGASPN--VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAV 116 (156)
T ss_dssp HHH-SCTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHH-HHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHH
Confidence 467 88999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHh
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLR 124 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~ 124 (136)
+++|++. ++ ++.+|..|.||||+|+..| .+++++|+++
T Consensus 117 v~~Ll~~-~~------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 117 VSFLAAE-SD------LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHTT-SC------TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHhc-cC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999988 66 7799999999999999999 9999999975
No 47
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.95 E-value=9.4e-28 Score=167.68 Aligned_cols=122 Identities=16% Similarity=0.088 Sum_probs=112.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccc------cCCCCcHHHHHHH---cCChhhHHHh-hcccCccccCCCCCcHHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVE------DNGLMTPLHRAAV---DGDGGVITEI-ASSESLAKLTSNDETALIL 70 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~------~~~g~~~l~~a~~---~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~ 70 (136)
||.|+..|+.+.++.|++.|++++ .. +..|.||||+|+. .|+.+++++| ..|++++.+|..|.||||+
T Consensus 136 L~~A~~~g~~~~v~~ll~~g~~~n--~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 136 LWTAICNRDLLSVLEAFANGQDFG--QPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSS--SCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHhccCHHHHHHHHhhccccc--CCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 578999999999999999999987 55 7899999999976 8999999999 9999999999999999999
Q ss_pred HHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 71 AVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 71 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
|+..|+.+++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 214 A~~~g~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRAL------VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCC------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999 7799999999999999999 9999999999987653
No 48
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.95 E-value=2.9e-27 Score=154.60 Aligned_cols=124 Identities=16% Similarity=0.095 Sum_probs=113.6
Q ss_pred CchhhhcCChhhhhHhhccCCCCC----cccccCCCCcHHHHHHHc---CChhhHHHh-hcccCccccCCCCCcHHHHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESR----PVVEDNGLMTPLHRAAVD---GDGGVITEI-ASSESLAKLTSNDETALILAV 72 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~~g~~~l~~a~~~---~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~ 72 (136)
|+.|+..++.+.++.+++.|.+++ ++..+..|.||||+|+.. |+.+++++| ..|++++.+|..|.||||+|+
T Consensus 134 l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~ 213 (278)
T 1dcq_A 134 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCC 213 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHH
T ss_pred hhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHH
Confidence 467899999999999999998854 124578899999999999 899999999 999999999999999999999
Q ss_pred HhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 73 KNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 73 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
..|+.+++++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+....
T Consensus 214 ~~g~~~~v~~Ll~~gad------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 214 LTDNAECLKLLLRGKAS------IEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp HTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred HcCCHHHHHHHHHcCCC------CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999 7799999999999999999 9999999999987543
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=4e-28 Score=154.86 Aligned_cols=125 Identities=20% Similarity=0.130 Sum_probs=114.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCC----cccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCC-CCCcHHHHHHHh
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESR----PVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTS-NDETALILAVKN 74 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~-~~~t~l~~a~~~ 74 (136)
||+|+..|+.+++++|++.+.+.. +...+..|.||||+|+..|+.+++++| ..+++++.++. .|.||||+|+..
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 589999999999999999886521 136788899999999999999999999 99999999987 999999999999
Q ss_pred CCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccch
Q 040650 75 SQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVSY 131 (136)
Q Consensus 75 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~~ 131 (136)
|+.+++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+.+...
T Consensus 162 ~~~~~v~~Ll~~ga~------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 213 (236)
T 1ikn_D 162 QNPDLVSLLLKCGAD------VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQM 213 (236)
T ss_dssp TCHHHHHHHHTTTCC------SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSS
T ss_pred CCHHHHHHHHHcCCC------CCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhc
Confidence 999999999999998 7799999999999999999 99999999999977643
No 50
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=3.5e-27 Score=154.87 Aligned_cols=58 Identities=24% Similarity=0.232 Sum_probs=33.0
Q ss_pred CcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 65 ETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 65 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++
T Consensus 200 ~t~L~~A~~~g~~~~v~~Ll~~g~d------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 258 (299)
T 1s70_B 200 GTALHVAAAKGYTEVLKLLIQARYD------VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258 (299)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHCCcHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 3444444444444444444444444 4456666666666666666 66666666666554
No 51
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.8e-27 Score=152.38 Aligned_cols=121 Identities=17% Similarity=0.088 Sum_probs=89.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||.|++.++.+.++.|+++|.+++ .+..|.||||.|+..|+.+++++| ..+++++.+|..|.||||+|+..|+.++
T Consensus 9 L~~a~~~~~~~~~~~ll~~g~~~~---~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~ 85 (239)
T 1ycs_B 9 LPPGKRTNLRKTGSERIAHGMRVK---FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEI 85 (239)
T ss_dssp -------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHH
T ss_pred CchhhhhhhHHHHHHHhccCCCcc---cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 689999999999999999999987 357889999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
+++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 86 v~~Ll~~ga~------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 86 VKFLVQFGVN------VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp HHHHHHHTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce
Confidence 9999999998 7799999999999999999 9999999999987653
No 52
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=1.1e-27 Score=161.22 Aligned_cols=120 Identities=19% Similarity=0.140 Sum_probs=114.4
Q ss_pred CchhhhcC--ChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccC-----ccccCCCCCcHHHHHH
Q 040650 1 MHKALVEG--DGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSES-----LAKLTSNDETALILAV 72 (136)
Q Consensus 1 l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~-----~~~~~~~~~t~l~~a~ 72 (136)
||+|+..| +.+++++|++.|++++ ..|..|.||||+|+..|+.+++++| ..+++ ++.+|..|.||||+|+
T Consensus 142 L~~A~~~g~~~~~~v~~Ll~~ga~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~ 219 (364)
T 3ljn_A 142 LHWCVGLGPEYLEMIKILVQLGASPT--AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAI 219 (364)
T ss_dssp HHHHHHSCGGGHHHHHHHHHHTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHH
T ss_pred HHHHHHcCCchHHHHHHHHHcCCCCc--ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHH
Confidence 58999999 9999999999999998 8999999999999999999999999 88888 9999999999999999
Q ss_pred HhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 73 KNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 73 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
..|+.+++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+.+
T Consensus 220 ~~g~~~~v~~Ll~~gad------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 220 LINWEDVAMRFVEMGID------VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp TTTCHHHHHHHHTTTCC------TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred HcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 99999999999999999 7799999999999999999 99999999998654
No 53
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=5.9e-27 Score=148.45 Aligned_cols=121 Identities=24% Similarity=0.196 Sum_probs=95.9
Q ss_pred CchhhhcCChhhhhHhhccCCCCCccc-ccCCCCcHHHHHHHcCChhhHHHh-hcc--cCccccCCCCCcHHHHHHHhCC
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVV-EDNGLMTPLHRAAVDGDGGVITEI-ASS--ESLAKLTSNDETALILAVKNSQ 76 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~g~~~l~~a~~~~~~~~~~~l-~~~--~~~~~~~~~~~t~l~~a~~~~~ 76 (136)
||+|+..|+.+++++|++.+++.++.. .+..|.||||+|+..|+.+++++| ..+ .+++..+..|.||||+|+..++
T Consensus 40 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~ 119 (228)
T 2dzn_A 40 LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW 119 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCC
Confidence 477888888888888888874444224 667788888888888888888888 666 7777777788888888888888
Q ss_pred HHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 77 IDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 77 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
.+++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|..
T Consensus 120 ~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 165 (228)
T 2dzn_A 120 FEVSQFLIENGAS------VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS 165 (228)
T ss_dssp HHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HhHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 8888888888877 6688888888888888888 8888888888833
No 54
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=2.7e-27 Score=155.14 Aligned_cols=119 Identities=18% Similarity=0.195 Sum_probs=94.7
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|++++ .. +|.||||+|+..|+.+++++| ..|++++.+|..|.||||+|+..|+.++
T Consensus 35 L~~A~~~g~~~~v~~Ll~~g~~~~--~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~ 110 (285)
T 3kea_A 35 SYYAIADNNVRLVCTLLNAGALKN--LL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQT 110 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTGGGS--CC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCC--CC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 577888888888888888887776 44 478888888888888888888 7788888888888888888888888888
Q ss_pred HHHHHHHhhhcchhhhhcccccCC-ChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEG-NSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~-~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.++..| .||||+|+..| .+++++|+++|+...
T Consensus 111 v~~Ll~~ga~------~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 111 VKLFVKKNWR------LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp HHHHHHHCGG------GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred HHHHHhcCCC------CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 8888888877 55777777 68888888888 888888888776553
No 55
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=7.7e-27 Score=145.47 Aligned_cols=119 Identities=21% Similarity=0.214 Sum_probs=57.6
Q ss_pred chhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh--hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 2 HKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI--ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l--~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
|+|++.|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..+.+++..+..|.||||+|+..++.++
T Consensus 44 ~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 121 (201)
T 3hra_A 44 NIAVHNNDIEIAKALIDRGADIN--LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDN 121 (201)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHH
Confidence 44445555555555555444444 4444445555555555555555444 3333444444445555555555555555
Q ss_pred HHHHHHHh-hhcchhhhhcccccCCChHHHHHHhcC------HHHHHHHHHhccCc
Q 040650 80 FKILMEET-KRHNLEHLFSATDKEGNSILHLAALNK------LIVVKILMLRMLYP 128 (136)
Q Consensus 80 ~~~Ll~~~-~~~~~~~~~~~~~~~~~t~l~~a~~~~------~~~~~~Ll~~g~~~ 128 (136)
+++|+++| ++ ++.+|..|+||||+|+..+ .+++++|+++|+++
T Consensus 122 v~~Ll~~g~~~------~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 122 VKLLLEDGRED------IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp HHHHHHHCCCC------TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHcCCCC------cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 55555444 33 3344555555555555332 34555555555443
No 56
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=8.1e-27 Score=148.65 Aligned_cols=119 Identities=22% Similarity=0.258 Sum_probs=70.4
Q ss_pred chhhhcCChhhhhHhhccC-CCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 2 HKALVEGDGEVVHFLGKLD-LESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
|+|+..|+.+++++|++.+ .+++ ..+..|.||||+|+..++.+++++| ..+++++.++..|.||||+|+..|+.++
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVN--CQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcc--cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHH
Confidence 4555555555555555554 3343 4455555555555555555555555 5555555555555666666666666666
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
+++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+++
T Consensus 160 ~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 160 AEILLAAKCD------LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203 (237)
T ss_dssp HHHHHTTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred HHHHHHcCCC------CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC
Confidence 6666655555 4566666666666666666 66666666666654
No 57
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=5.1e-27 Score=161.29 Aligned_cols=122 Identities=26% Similarity=0.281 Sum_probs=105.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.+++++ ..+..|.||||+|+..|+.+++++| +.+++++.++..|.||||+|+..|+.++
T Consensus 249 L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~ 326 (437)
T 1n11_A 249 LHLAAQEGHAEMVALLLSKQANGN--LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKL 326 (437)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTT--CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHH
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHH
Confidence 477888888888888888888877 7788888888888888888888888 8888888888888899999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
+++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 327 v~~Ll~~gad------~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 327 VKFLLQHQAD------VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHhcCCC------CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 9999988888 6788999999999999999 9999999999987654
No 58
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=6.3e-27 Score=144.40 Aligned_cols=105 Identities=20% Similarity=0.141 Sum_probs=98.9
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccC-CCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLT-SNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~-~~~~t~l~~a~~~~~~~ 78 (136)
||+|++.|+.+++++|++ +.+++ ..|..|+||||+|+..|+.+++++| ..+++++.++ ..|.||||+|+..++.+
T Consensus 48 L~~A~~~g~~~~v~~Ll~-~~~~~--~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~ 124 (183)
T 3deo_A 48 WWTAARKADEQALSQLLE-DRDVD--AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 124 (183)
T ss_dssp HHHHHHTTCHHHHHHHTT-TSCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHh-cCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHH
Confidence 589999999999999999 88888 8999999999999999999999999 9999999988 88999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK 114 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~ 114 (136)
++++|+++|++ ++.+|..|+||||+|+..+
T Consensus 125 ~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 125 VVEALVELGAD------IEVEDERGLTALELAREIL 154 (183)
T ss_dssp HHHHHHHHTCC------TTCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHcCCC------CcCCCCCCCCHHHHHHHhc
Confidence 99999999998 7799999999999998763
No 59
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=9.7e-27 Score=148.46 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=74.7
Q ss_pred chhhhcCChhhhhHhhccCC----CCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccC-CCCCcHHHHHHHhC
Q 040650 2 HKALVEGDGEVVHFLGKLDL----ESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLT-SNDETALILAVKNS 75 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~-~~~~t~l~~a~~~~ 75 (136)
|+|+..++.+++++|++.+. +++ ..+..|.||||+|+..|+.+++++| ..+++++..+ ..|.||||+|+..+
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLE--ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCcccccc--ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence 45555555555555555544 333 4555566666666666666666666 5556665555 55666666666666
Q ss_pred CHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 76 QIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 76 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+.+++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|+++.
T Consensus 162 ~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 162 SLSMVQLLLQHGAN------VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp CHHHHHHHHHTTCC------TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 66666666666665 5566777777777777777 777777777776543
No 60
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=5.5e-28 Score=157.33 Aligned_cols=120 Identities=18% Similarity=0.187 Sum_probs=106.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
+|+|+..++.+++++|++.|++++ ..|..|+||||+|+..|+.+++++| +.|++++.++..|.||||+|+..|+.++
T Consensus 123 l~~a~~~~~~~~~~~Ll~~g~~~n--~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~ 200 (269)
T 4b93_B 123 LHLACQQGHFQVVKCLLDSNAKPN--KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFV 200 (269)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSC--CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred cccccccChHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHH
Confidence 478899999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC--HHHHHHHHHhccCc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK--LIVVKILMLRMLYP 128 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~Ll~~g~~~ 128 (136)
+++|+++|++ ++.+|..|+||||+|+.++ .++++++.+.++..
T Consensus 201 v~~Ll~~Gad------~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 201 VELLLLHGAS------VQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASL 245 (269)
T ss_dssp HHHHHHTTCC------SCCCCTTSCCSGGGSCTTCHHHHHTTC--------
T ss_pred HHHHHHCCCC------CCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhh
Confidence 9999999998 7799999999999999888 57777777766543
No 61
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=6.4e-27 Score=145.82 Aligned_cols=117 Identities=23% Similarity=0.172 Sum_probs=109.1
Q ss_pred CchhhhcCChhhhhHhhc-cCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcc-cCccccCCCCCcHHHHHHHhCC-
Q 040650 1 MHKALVEGDGEVVHFLGK-LDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASS-ESLAKLTSNDETALILAVKNSQ- 76 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~-~~~~~~~~~~~t~l~~a~~~~~- 76 (136)
||+|+..|+.+++++|++ .+.+++ ..+..|.||||+|+..|+.+++++| ..+ .+++.+|..|.||||+|+..+.
T Consensus 76 l~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 153 (201)
T 3hra_A 76 YLYAGAQGRTEILAYMLKHATPDLN--KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREG 153 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCCTT--CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCC
T ss_pred HHHHHHcCCHHHHHHHHhccCcccc--cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccc
Confidence 589999999999999994 555777 8899999999999999999999999 777 8999999999999999999998
Q ss_pred ----HHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhc
Q 040650 77 ----IDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRM 125 (136)
Q Consensus 77 ----~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g 125 (136)
.+++++|+++|++ ++.+|..|+||||+|+..| .+++++|+++|
T Consensus 154 ~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 154 NQLYQDIVKLLMENGAD------QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SHHHHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hhhHHHHHHHHHHCCCC------CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999998 7799999999999999999 99999999887
No 62
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=6.3e-27 Score=155.99 Aligned_cols=128 Identities=20% Similarity=0.146 Sum_probs=110.8
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCC---hhhHHHh-hcc-cCccccCCCCCcHHHHHHH--
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGD---GGVITEI-ASS-ESLAKLTSNDETALILAVK-- 73 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~---~~~~~~l-~~~-~~~~~~~~~~~t~l~~a~~-- 73 (136)
||+|+..|+.+++++|+++|++++ ..|..|+||||+|+..|+ .++++.| ..+ ++++.+|..|.||||+|+.
T Consensus 135 Lh~Aa~~g~~~~v~~Ll~~Gad~n--~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~ 212 (327)
T 1sw6_A 135 LHWLTSIANLELVKHLVKHGSNRL--YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITS 212 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHc
Confidence 689999999999999999999998 899999999999999998 6777777 444 7899999999999999999
Q ss_pred --hCCHHHHHHHHHHhhhc--------------------c-------------------hhhhhcccccCCChHHHHHHh
Q 040650 74 --NSQIDAFKILMEETKRH--------------------N-------------------LEHLFSATDKEGNSILHLAAL 112 (136)
Q Consensus 74 --~~~~~~~~~Ll~~~~~~--------------------~-------------------~~~~~~~~~~~~~t~l~~a~~ 112 (136)
.|+.+++++|++.+... + ....++.+|..|+||||+|+.
T Consensus 213 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~ 292 (327)
T 1sw6_A 213 GMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR 292 (327)
T ss_dssp TSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHH
Confidence 89999999999885421 0 000277899999999999999
Q ss_pred cC-HHHHHHHHHhccCccc
Q 040650 113 NK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 113 ~~-~~~~~~Ll~~g~~~~~ 130 (136)
.| .+++++|+++|+++..
T Consensus 293 ~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 293 LGNISIVDALLDYGADPFI 311 (327)
T ss_dssp HCCHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCcc
Confidence 99 9999999999988653
No 63
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=4.5e-27 Score=155.20 Aligned_cols=119 Identities=17% Similarity=0.077 Sum_probs=112.3
Q ss_pred CchhhhcCChhhhhHhhccCCCCCccc------ccCCCCcHHHHHHHc---CChhhHHHh-hcccCccccCCCCCcHHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVV------EDNGLMTPLHRAAVD---GDGGVITEI-ASSESLAKLTSNDETALIL 70 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~g~~~l~~a~~~---~~~~~~~~l-~~~~~~~~~~~~~~t~l~~ 70 (136)
|+.|+..|+.+.++.|++.|.+++ . .+..|.||||+|+.. ++.+++++| ..+++++.+|..|.||||+
T Consensus 155 L~~A~~~g~~~~v~~ll~~g~d~~--~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 155 LWTAICNRDLLSVLEAFANGQDFG--QPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--SCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HhhhhhccCHHHHHHHHhcCCccc--ccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 578999999999999999999887 5 588999999999997 899999999 8999999999999999999
Q ss_pred HHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 71 AVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 71 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
|+..|+.+++++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+.
T Consensus 233 A~~~g~~~~v~~Ll~~gad------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRAL------VGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCC------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 9999999999999999999 7799999999999999999 9999999999875
No 64
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.3e-26 Score=128.50 Aligned_cols=91 Identities=36% Similarity=0.472 Sum_probs=85.8
Q ss_pred CCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHH
Q 040650 31 GLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHL 109 (136)
Q Consensus 31 ~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~ 109 (136)
+|+||||+|+..|+.+++++| +.+++++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHH
Confidence 478999999999999999999 99999999999999999999999999999999999998 77999999999999
Q ss_pred HHhcC-HHHHHHHHHhccC
Q 040650 110 AALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 110 a~~~~-~~~~~~Ll~~g~~ 127 (136)
|+..| .+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 99999 9999999999974
No 65
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.6e-26 Score=150.34 Aligned_cols=121 Identities=19% Similarity=0.202 Sum_probs=114.4
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccc-cCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVE-DNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||.|++.|+.+++++|++.|++++ .. +..|.||||+|+..|+.+++++| +.+++++.++..|.||||+|+..|+.+
T Consensus 9 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 86 (285)
T 1wdy_A 9 LIKAVQNEDVDLVQQLLEGGANVN--FQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVK 86 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcc--cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 578999999999999999999888 55 78899999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
++++|+++|++ ++.+|..|.||||+|+..| .+++++|+++|+.+.
T Consensus 87 ~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 132 (285)
T 1wdy_A 87 LLKLFLSKGAD------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN 132 (285)
T ss_dssp HHHHHHHTTCC------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCC------CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc
Confidence 99999999998 7799999999999999999 999999999998765
No 66
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=1.8e-27 Score=153.44 Aligned_cols=122 Identities=21% Similarity=0.187 Sum_probs=109.8
Q ss_pred Cchhhhc---CChhhhhHhhccCCCCCc---------ccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCC----
Q 040650 1 MHKALVE---GDGEVVHFLGKLDLESRP---------VVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSN---- 63 (136)
Q Consensus 1 l~~a~~~---~~~~~~~~ll~~~~~~~~---------~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~---- 63 (136)
||+|+.. |+.+++++|++.|++++. ...|..|.||||+|+..|+.+++++| +.+++++.++..
T Consensus 47 L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~ 126 (256)
T 2etb_A 47 LMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQ 126 (256)
T ss_dssp HHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS
T ss_pred HHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccc
Confidence 5899999 999999999998876650 01236799999999999999999999 999999998876
Q ss_pred ---------CCcHHHHHHHhCCHHHHHHHHH---HhhhcchhhhhcccccCCChHHHHHHh--cC-HH-------HHHHH
Q 040650 64 ---------DETALILAVKNSQIDAFKILME---ETKRHNLEHLFSATDKEGNSILHLAAL--NK-LI-------VVKIL 121 (136)
Q Consensus 64 ---------~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~~t~l~~a~~--~~-~~-------~~~~L 121 (136)
|.||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+. .+ .+ ++++|
T Consensus 127 ~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~L 200 (256)
T 2etb_A 127 KHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS------LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGL 200 (256)
T ss_dssp CCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHH
Confidence 9999999999999999999999 8988 77999999999999998 67 88 99999
Q ss_pred HHhccCc
Q 040650 122 MLRMLYP 128 (136)
Q Consensus 122 l~~g~~~ 128 (136)
+++|+++
T Consensus 201 l~~ga~~ 207 (256)
T 2etb_A 201 LQMGARL 207 (256)
T ss_dssp HHHHHHH
T ss_pred HHcCCCc
Confidence 9999876
No 67
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=1.4e-26 Score=149.85 Aligned_cols=120 Identities=24% Similarity=0.244 Sum_probs=98.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++| +.+++++.+|..|.||||+|+..++.++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 149 (261)
T 2xai_A 73 LFNACVSGSWDCVNLLLQHGASVQ---PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 149 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSS---CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHH
Confidence 466777777777777777776665 244577788888888888888888 7788888888888899999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
+++|+++|++ ++. +..|.||||+|+..| .+++++|+++|+++..
T Consensus 150 v~~Ll~~g~~------~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 150 VKKLLESGAD------VNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQA 194 (261)
T ss_dssp HHHHHHHTCC------TTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCC------CCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9999998888 554 889999999999999 9999999999987653
No 68
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=1.6e-26 Score=147.32 Aligned_cols=119 Identities=19% Similarity=0.223 Sum_probs=69.6
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.++..|.||||+|+..|+.++
T Consensus 15 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 92 (237)
T 3b7b_A 15 LHAAAEAGHVDICHMLVQAGANID--TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEV 92 (237)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCcC--ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Confidence 355666666666666666666555 5556666666666666666666666 5566666555566666666666666666
Q ss_pred HHHHHHHh-hhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 80 FKILMEET-KRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 80 ~~~Ll~~~-~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
+++|++.+ .+ ++..+..|.||||+|+..| .+++++|+++|+.
T Consensus 93 ~~~Ll~~~~~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 136 (237)
T 3b7b_A 93 VQYLLSNGQMD------VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD 136 (237)
T ss_dssp HHHHHTTTCCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHhCCCCC------cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 66666555 33 3344555555555555555 5555555555543
No 69
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=8.4e-27 Score=149.77 Aligned_cols=117 Identities=20% Similarity=0.155 Sum_probs=108.8
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccC-CCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLT-SNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~-~~~~t~l~~a~~~~~~~ 78 (136)
||+|++.|+.+++++|++ +.+++ ..|..|+||||+|+..|+.+++++| ..+++++.++ ..|.||||+|+..|+.+
T Consensus 49 L~~A~~~g~~~~v~~Ll~-~~~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~ 125 (244)
T 3ui2_A 49 WWTAARKADEQALSQLLE-DRDVD--AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 125 (244)
T ss_dssp HHHHHTTTCHHHHHHTTT-TCCTT--CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHc-CCCCC--CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 589999999999999999 88888 8999999999999999999999999 9999999988 78999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHH----------------hcC-HHHHHHHHHhcc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAA----------------LNK-LIVVKILMLRML 126 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~----------------~~~-~~~~~~Ll~~g~ 126 (136)
++++|+++|++ ++.+|..|+||||+|+ ..| .+++++|++++.
T Consensus 126 ~v~~Ll~~ga~------~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 126 VVEALVELGAD------IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHTTCC------TTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHCCCC------CCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 99999999998 7789999999998887 668 999999998754
No 70
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=151.34 Aligned_cols=126 Identities=18% Similarity=0.167 Sum_probs=83.3
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..|+.++
T Consensus 63 L~~Aa~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~ 140 (285)
T 3d9h_A 63 MHEAAIHGHQLSLRNLISQGWAVN--IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDC 140 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSC--EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHH
Confidence 466777777777777777776666 6677777777777777777777777 6677777777777777777777777777
Q ss_pred HHHHHHHhhhcc--------------------------hhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 80 FKILMEETKRHN--------------------------LEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 80 ~~~Ll~~~~~~~--------------------------~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
+++|+++|++.+ ....++.+|..|+||||+|+..| .+++++|+++|+++
T Consensus 141 v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 216 (285)
T 3d9h_A 141 VNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 216 (285)
T ss_dssp HHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCC
Confidence 777776665522 11124455666666666666666 66666666666544
No 71
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=4e-27 Score=154.27 Aligned_cols=116 Identities=19% Similarity=0.135 Sum_probs=82.6
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCC-CcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSND-ETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~-~t~l~~a~~~~~~~ 78 (136)
||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..+++++.++..| .||||+|+..|+.+
T Consensus 66 L~~A~~~g~~~~v~~Ll~~ga~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~ 143 (285)
T 3kea_A 66 LHQAATLEDTKIVKILLFSGLDDS--QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVS 143 (285)
T ss_dssp HHHHTTSSSCHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHH
Confidence 578888888888888888888887 7788888888888888888888888 7788888877777 67777777777777
Q ss_pred HHHHHHHHhhhcchhhhhccccc-CCChHHHHHHhcC-HHHHHHHHHhcc
Q 040650 79 AFKILMEETKRHNLEHLFSATDK-EGNSILHLAALNK-LIVVKILMLRML 126 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~-~~~t~l~~a~~~~-~~~~~~Ll~~g~ 126 (136)
++++|+++|++. .+. .|.||||+|+..| .+++++|+++|+
T Consensus 144 ~v~~Ll~~g~~~--------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 185 (285)
T 3kea_A 144 IVSYFLSEIPST--------FDLAILLSCIHITIKNGHVDMMILLLDYMT 185 (285)
T ss_dssp HHHHHHTTSCTT--------CCCSTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcc--------ccccCCccHHHHHHHcChHHHHHHHHHcCC
Confidence 777777666542 111 4445555555544 555555554444
No 72
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.9e-26 Score=149.95 Aligned_cols=122 Identities=23% Similarity=0.234 Sum_probs=114.8
Q ss_pred CchhhhcCChhhhhHhhcc-CCCCCcccccCCCCcHHHHHHHcCC----hhhHHHh-hcccCccccCCCCCcHHHHHHHh
Q 040650 1 MHKALVEGDGEVVHFLGKL-DLESRPVVEDNGLMTPLHRAAVDGD----GGVITEI-ASSESLAKLTSNDETALILAVKN 74 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~g~~~l~~a~~~~~----~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~ 74 (136)
||+|+..|+.+++++|++. +.+++ ..+..|.||||+|+..+. .+++++| +.+++++.++..|.||||+|+..
T Consensus 152 L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 229 (285)
T 1wdy_A 152 LMDAAEKGHVEVLKILLDEMGADVN--ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK 229 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTSCCCTT--CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCCC--ccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 5789999999999999987 88888 889999999999999999 8899999 99999999999999999999999
Q ss_pred CCHHHHHHHHH-HhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 75 SQIDAFKILME-ETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 75 ~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
++.+++++|++ .|++ ++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 230 ~~~~~v~~Ll~~~g~~------~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 230 KHLGLVQRLLEQEHIE------INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp TCHHHHHHHHHSSSCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred CCHHHHHHHHhccCCC------ccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 99999999999 7888 7799999999999999999 9999999999988653
No 73
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.94 E-value=1.7e-26 Score=155.87 Aligned_cols=120 Identities=14% Similarity=0.070 Sum_probs=112.5
Q ss_pred Cchhhhc-CChhhhhHhhccCCCCCccccc--CCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCC
Q 040650 1 MHKALVE-GDGEVVHFLGKLDLESRPVVED--NGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQ 76 (136)
Q Consensus 1 l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~--~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~ 76 (136)
||.|+.. ++.+++++|++.|++++ ..+ ..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++
T Consensus 203 L~~Aa~~~g~~~~v~~LL~~Gadvn--~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~ 280 (368)
T 3jue_A 203 LFRASGHPPSLPTMADALAHGADVN--WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGH 280 (368)
T ss_dssp HHHHTSSSCCHHHHHHHHHTTCCTT--CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHccCCHHHHHHHHHcCCCCC--ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCc
Confidence 5789999 99999999999999998 777 8899999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 77 IDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 77 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
.+++++|+++|++ ++.+|..|.||||+|+..| .+++++|+..+...
T Consensus 281 ~~~v~~LL~~Gad------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 281 TGLACLFLKRGAD------LGARDSEGRDPLTIAMETANADIVTLLRLAKMRE 327 (368)
T ss_dssp HHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred HHHHHHHHHCcCC------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 9999999999998 7799999999999999999 99999999988543
No 74
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=2.8e-26 Score=153.09 Aligned_cols=122 Identities=19% Similarity=0.153 Sum_probs=113.9
Q ss_pred CchhhhcCChhhhhHhhcc-CCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKL-DLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||.|++.|+.+.++.++.. +.+++ ..|..|.||||+|+..|+.+++++| +.+++++.+|..|.||||+|+..|+.+
T Consensus 28 L~~A~~~g~~~~v~~ll~~~~~~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 105 (351)
T 3utm_A 28 LLEAARSGNEEKLMALLTPLNVNCH--ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE 105 (351)
T ss_dssp HHHHHHHTCHHHHHHHCCTTTTTCC--CSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCcc--cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHH
Confidence 5789999999999999875 66666 8899999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
++++|+++|++ ++..|..|.||||+|+..| .+++++|+++|+.+..
T Consensus 106 iv~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 106 VTELLLKHGAC------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp HHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999998 7799999999999999999 9999999999987653
No 75
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=5.7e-27 Score=152.96 Aligned_cols=117 Identities=21% Similarity=0.246 Sum_probs=70.0
Q ss_pred CchhhhcCChhhhhHhhccCC-CCCcccccCC--------------------------------------CCcHHHHHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDL-ESRPVVEDNG--------------------------------------LMTPLHRAAV 41 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~--------------------------------------g~~~l~~a~~ 41 (136)
||+|+..|+.+++++|++.|+ +++ ..+.. |+||||+|+.
T Consensus 115 Lh~A~~~g~~~~v~~Ll~~g~~~~~--~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~ 192 (276)
T 4hbd_A 115 LHYSVSHANFPVVQQLLDSGVCKVD--KQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVS 192 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCCCTT--CCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCCcCC--CCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 578888888888888888876 554 44544 4555555555
Q ss_pred cCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHH-HhhhcchhhhhcccccCCChHHHHHHhcC-HHHH
Q 040650 42 DGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILME-ETKRHNLEHLFSATDKEGNSILHLAALNK-LIVV 118 (136)
Q Consensus 42 ~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~ 118 (136)
.|+.+++++| ..|++++.+|..|.||||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+..| .+++
T Consensus 193 ~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad------~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 193 HGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD------ISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC------TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC------CcCcCCCCCCHHHHHHHcCCHHHH
Confidence 5555555555 5555555555555555555555555555555555 4554 4455555555555555555 5555
Q ss_pred HHHHHhc
Q 040650 119 KILMLRM 125 (136)
Q Consensus 119 ~~Ll~~g 125 (136)
++|++++
T Consensus 267 ~~Ll~~~ 273 (276)
T 4hbd_A 267 SMLYSRM 273 (276)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 5555544
No 76
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=3.4e-26 Score=149.82 Aligned_cols=120 Identities=23% Similarity=0.235 Sum_probs=95.3
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.+.+++ . +..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~--~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 205 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQ--P-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 205 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSS--C-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCC--C-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 356666777777777777666665 2 33477777777777777777777 7777888888888888888888888888
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
+++|++.|++ ++ .+..|.||||+|+..| .+++++|+++|+++..
T Consensus 206 v~~Ll~~ga~------~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 250 (285)
T 3d9h_A 206 VKKLLESGAD------VN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQA 250 (285)
T ss_dssp HHHHHHTTCC------TT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHCCCC------CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 8888888887 55 4889999999999999 9999999999987653
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.5e-27 Score=147.75 Aligned_cols=118 Identities=12% Similarity=0.111 Sum_probs=103.9
Q ss_pred CchhhhcCCh----hhhhHhhccCCCCCcccccCCCCcHHHHHHHcCC------hhhHHHh-hcccCccccCCCCC-cHH
Q 040650 1 MHKALVEGDG----EVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGD------GGVITEI-ASSESLAKLTSNDE-TAL 68 (136)
Q Consensus 1 l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~------~~~~~~l-~~~~~~~~~~~~~~-t~l 68 (136)
||+|+..++. +++++|++.|++++ ..+..|+||||+|+..++ .+++++| ..|++++.+|..|. |||
T Consensus 42 Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn--~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpL 119 (186)
T 3t8k_A 42 LYDVLRNNNDEARYKISMFLINKGADIK--SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVF 119 (186)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHTTCCSS--CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTT
T ss_pred HHHHHHcCCcchHHHHHHHHHHCCCCCC--CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHH
Confidence 5889998875 58999999999998 889999999999999887 4678988 99999999999999 999
Q ss_pred HHHHHhC-----CHHHHHHHHH-HhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhcc
Q 040650 69 ILAVKNS-----QIDAFKILME-ETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRML 126 (136)
Q Consensus 69 ~~a~~~~-----~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~ 126 (136)
|+|+..+ ..+++++|++ +|++ ++.+|..|+||||+|+..| .+++++|++...
T Consensus 120 h~A~~~~~~~~~~~~iv~~Ll~~~gad------~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 120 KNIFNYFVDENEMIPLYKLIFSQSGLQ------LLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp GGGGGCCSCHHHHHHHHHHHHTSTTCC------TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCChhhHHHHHHHHHHhcCCC------CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999844 3568999999 8998 7799999999999999999 999999987753
No 78
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=3.8e-26 Score=145.69 Aligned_cols=122 Identities=25% Similarity=0.271 Sum_probs=63.3
Q ss_pred CchhhhcCChhhhhHhhc----cCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhC
Q 040650 1 MHKALVEGDGEVVHFLGK----LDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNS 75 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~----~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~ 75 (136)
||+|+..|+.+++++|++ .+.+++ ..+..|.||||+|+..|+.+++++| +.+++++.++..|.||||+|+..+
T Consensus 13 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 90 (241)
T 1k1a_A 13 LHIAVVQGNLPAVHRLVNLFQQGGRELD--IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHR 90 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTCCSC--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCC--cccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 355566666666555554 444444 5555555666666666666666655 555555555555555555555555
Q ss_pred CHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhcc
Q 040650 76 QIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRML 126 (136)
Q Consensus 76 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~ 126 (136)
+.+++++|++.++... ..++..+..|.||||+|+..| .+++++|+++|+
T Consensus 91 ~~~~~~~Ll~~~~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 140 (241)
T 1k1a_A 91 SPTCLRALLDSAAPGT--LDLEARNYDGLTALHVAVNTECQETVQLLLERGA 140 (241)
T ss_dssp CHHHHHHHHHHSCTTS--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCcc--ccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 5555555555544100 003334444444444444444 444444444443
No 79
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=2.4e-26 Score=157.90 Aligned_cols=120 Identities=23% Similarity=0.268 Sum_probs=101.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+++++.++..|.||||+|+..|+.++
T Consensus 18 L~~Aa~~g~~~~v~~Ll~~g~~~~--~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~ 95 (437)
T 1n11_A 18 LHVASFMGHLPIVKNLLQRGASPN--VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNM 95 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSC--CSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 578899999999999999888887 7888889999999999999999998 8888888888889999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
+++|+++|++ ++..+..|.||||+|+..| .+++++|+++++..
T Consensus 96 v~~Ll~~ga~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 139 (437)
T 1n11_A 96 VKLLLENNAN------PNLATTAGHTPLHIAAREGHVETVLALLEKEASQ 139 (437)
T ss_dssp HHHHHHHTCC------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHhCCCC------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 9999998887 5577777777777777777 77777777776654
No 80
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=151.38 Aligned_cols=84 Identities=23% Similarity=0.252 Sum_probs=61.4
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-h-cccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-A-SSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~-~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||+|+..|+.+++++|++.|++++ ..|..|+||||+|+..|+.+++++| . .+++++.+|..|.||||+|+..|+.+
T Consensus 187 Lh~A~~~g~~~~v~~Ll~~gad~n--~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~ 264 (276)
T 4hbd_A 187 LMLAVSHGRVDVVKALLACEADVN--VQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSE 264 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCC--CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHH
Confidence 466777777777777777777776 6677777777777777777777777 5 67777777777777777777777777
Q ss_pred HHHHHHHH
Q 040650 79 AFKILMEE 86 (136)
Q Consensus 79 ~~~~Ll~~ 86 (136)
++++|+++
T Consensus 265 iv~~Ll~~ 272 (276)
T 4hbd_A 265 IASMLYSR 272 (276)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 77777765
No 81
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=9.4e-26 Score=150.51 Aligned_cols=87 Identities=18% Similarity=0.229 Sum_probs=71.0
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..+++++..+..|.||||+|+..|+.++
T Consensus 62 L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 139 (351)
T 3utm_A 62 LHLAAGYNRVRIVQLLLQHGADVH--AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEV 139 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--ccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 577888888888888888888777 7788888888888888888888888 7788888888888888888888888888
Q ss_pred HHHHHHHhhh
Q 040650 80 FKILMEETKR 89 (136)
Q Consensus 80 ~~~Ll~~~~~ 89 (136)
+++|+++|++
T Consensus 140 v~~Ll~~g~~ 149 (351)
T 3utm_A 140 CSLLLSHGAD 149 (351)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHcCCC
Confidence 8888877654
No 82
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=5.6e-26 Score=153.00 Aligned_cols=119 Identities=20% Similarity=0.139 Sum_probs=84.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccc--------------------
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAK-------------------- 59 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~-------------------- 59 (136)
||+|+..|+.+++++|++.|.+++ ..|..|.||||+|+..|+.+++++| ..+++++.
T Consensus 24 L~~Aa~~g~~~~v~~Ll~~g~~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~ 101 (364)
T 3ljn_A 24 IHVAARKGQTDEVRRLIETGVSPT--IQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVV 101 (364)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcc--ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHH
Confidence 467777777777777777777776 6777777777777777777777777 55554433
Q ss_pred --------------------------------cCCCCCcHHHHHHHhC--CHHHHHHHHHHhhhcchhhhhcccccCCCh
Q 040650 60 --------------------------------LTSNDETALILAVKNS--QIDAFKILMEETKRHNLEHLFSATDKEGNS 105 (136)
Q Consensus 60 --------------------------------~~~~~~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t 105 (136)
.+..|.||||+|+..| +.+++++|+++|++ ++.+|..|+|
T Consensus 102 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~------~~~~d~~g~t 175 (364)
T 3ljn_A 102 ALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS------PTAKDKADET 175 (364)
T ss_dssp HHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC------TTCCCTTSCC
T ss_pred HHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC------CcccCCCCCC
Confidence 4455677777777777 77777777777766 5567777777
Q ss_pred HHHHHHhcC-HHHHHHHHHhccC
Q 040650 106 ILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 106 ~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
|||+|+..| .+++++|+++|+.
T Consensus 176 ~L~~A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 176 PLMRAMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCSC
T ss_pred HHHHHHHcCCHHHHHHHHhcccc
Confidence 777777777 7777777777665
No 83
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=2.4e-26 Score=150.90 Aligned_cols=121 Identities=17% Similarity=0.179 Sum_probs=113.1
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||.||..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..|++++.+|..|.||||+|+..|+.++
T Consensus 44 l~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~ 121 (299)
T 1s70_B 44 FLAACSSGDTEEVLRLLERGADIN--YANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDI 121 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHHCCCTT--CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHH
Confidence 578999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
+++|+++|++ ++.+|..|.||||+|+..+ .++++.++.....+.
T Consensus 122 v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~ 166 (299)
T 1s70_B 122 AEYLISQGAH------VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166 (299)
T ss_dssp HHHHHHTTCC------TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHhCCCC------CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCc
Confidence 9999999998 6799999999999999999 999998887655443
No 84
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=3.5e-25 Score=140.88 Aligned_cols=121 Identities=24% Similarity=0.174 Sum_probs=108.7
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccC-CCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLT-SNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~-~~~~t~l~~a~~~~~~~ 78 (136)
||.|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++| ..+.+++..+ ..|.||||+|+..++.+
T Consensus 13 l~~A~~~g~~~~~~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 90 (240)
T 3eu9_A 13 IVKATQYGIYERCRELVEAGYDVR--QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLS 90 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHH
T ss_pred HHHHHHcCChHHHHHHHHcCCCcC--CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHH
Confidence 578999999999999999998888 8889999999999999999999999 8888777554 45899999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
++++|++.|++ ++.++..|.||||+|+..| .+++++|+++|+.+.
T Consensus 91 ~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 91 MVVQLMKYGAD------PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD 136 (240)
T ss_dssp HHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCC------CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc
Confidence 99999999988 6688999999999999999 999999999987654
No 85
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=9.1e-26 Score=152.71 Aligned_cols=121 Identities=17% Similarity=0.131 Sum_probs=108.6
Q ss_pred CchhhhcC---ChhhhhHhhccCCCCCc------ccccCCCCcHHHHHHHcCChhhHHHh-hc-ccCccccCCCCCcHHH
Q 040650 1 MHKALVEG---DGEVVHFLGKLDLESRP------VVEDNGLMTPLHRAAVDGDGGVITEI-AS-SESLAKLTSNDETALI 69 (136)
Q Consensus 1 l~~a~~~~---~~~~~~~ll~~~~~~~~------~~~~~~g~~~l~~a~~~~~~~~~~~l-~~-~~~~~~~~~~~~t~l~ 69 (136)
||+|+..+ +.+++++|++.|.+++. ...+..|.||||+|+..|+.+++++| .. +++++.+|..|.||||
T Consensus 239 L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~ 318 (373)
T 2fo1_E 239 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 318 (373)
T ss_dssp HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred HHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHH
Confidence 47888887 89999999999988761 12567899999999999999999999 55 4999999999999999
Q ss_pred HHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 70 LAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 70 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
+|+..|+.+++++|+++|++ ++.+|..|.|||++|+..| .+++++|+++++.
T Consensus 319 ~A~~~g~~~iv~~Ll~~gad------~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 319 LAAQEGRIEVVMYLIQQGAS------VEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHTCHHHHHHHHHTTCC------SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHcCCHHHHHHHHHcCCC------ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 99999999999999999998 7799999999999999999 9999999999864
No 86
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=3.2e-26 Score=147.81 Aligned_cols=122 Identities=18% Similarity=0.143 Sum_probs=106.9
Q ss_pred Cchhh---hcCChhhhhHhhccCCCCC---------cccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccC------
Q 040650 1 MHKAL---VEGDGEVVHFLGKLDLESR---------PVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLT------ 61 (136)
Q Consensus 1 l~~a~---~~~~~~~~~~ll~~~~~~~---------~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~------ 61 (136)
||+|+ +.|+.+++++|++.|++.. ....|..|+||||+|+..|+.+++++| +.+++++.++
T Consensus 50 L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~ 129 (260)
T 3jxi_A 50 LPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQ 129 (260)
T ss_dssp HHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCS
T ss_pred HHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccC
Confidence 57777 7899999999999875421 124556899999999999999999999 9999999988
Q ss_pred --------CCCCcHHHHHHHhCCHHHHHHHHH---HhhhcchhhhhcccccCCChHHHHHHhcC----------HHHHHH
Q 040650 62 --------SNDETALILAVKNSQIDAFKILME---ETKRHNLEHLFSATDKEGNSILHLAALNK----------LIVVKI 120 (136)
Q Consensus 62 --------~~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~~t~l~~a~~~~----------~~~~~~ 120 (136)
..|.||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+..+ .+++++
T Consensus 130 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~------~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~ 203 (260)
T 3jxi_A 130 PKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD------LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDL 203 (260)
T ss_dssp SSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHH
Confidence 689999999999999999999999 8888 7799999999999999654 289999
Q ss_pred HHHhccCc
Q 040650 121 LMLRMLYP 128 (136)
Q Consensus 121 Ll~~g~~~ 128 (136)
|+++|+++
T Consensus 204 Ll~~ga~~ 211 (260)
T 3jxi_A 204 LLIKCAKL 211 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHhCccc
Confidence 99999865
No 87
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=5.6e-26 Score=147.75 Aligned_cols=122 Identities=19% Similarity=0.202 Sum_probs=107.8
Q ss_pred Cchhhhc---CChhhhhHhhccCCCC-------C--cccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCC-----
Q 040650 1 MHKALVE---GDGEVVHFLGKLDLES-------R--PVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTS----- 62 (136)
Q Consensus 1 l~~a~~~---~~~~~~~~ll~~~~~~-------~--~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~----- 62 (136)
||+|+.. |+.+++++|++.|++. + ....|..|.||||+|+..|+.+++++| +.+++++.++.
T Consensus 58 L~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~ 137 (273)
T 2pnn_A 58 LLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFK 137 (273)
T ss_dssp HHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGS
T ss_pred HHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccc
Confidence 5889976 9999999999987653 2 012567899999999999999999999 99999999886
Q ss_pred ---------CCCcHHHHHHHhCCHHHHHHHHH---HhhhcchhhhhcccccCCChHHHHHHhcC----------HHHHHH
Q 040650 63 ---------NDETALILAVKNSQIDAFKILME---ETKRHNLEHLFSATDKEGNSILHLAALNK----------LIVVKI 120 (136)
Q Consensus 63 ---------~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~~t~l~~a~~~~----------~~~~~~ 120 (136)
.|.||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+..| .+++++
T Consensus 138 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad------~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~ 211 (273)
T 2pnn_A 138 KTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD------ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNE 211 (273)
T ss_dssp SCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC------ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHH
Confidence 79999999999999999999999 8888 7799999999999999866 379999
Q ss_pred HHHhccCc
Q 040650 121 LMLRMLYP 128 (136)
Q Consensus 121 Ll~~g~~~ 128 (136)
|+++|+++
T Consensus 212 Ll~~ga~~ 219 (273)
T 2pnn_A 212 ILILGAKL 219 (273)
T ss_dssp HHHHHHHH
T ss_pred HHHhhhhc
Confidence 99999765
No 88
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=5.2e-25 Score=140.09 Aligned_cols=118 Identities=24% Similarity=0.199 Sum_probs=70.0
Q ss_pred chhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCC-hhhHHHh-hcccCccccCC-CCCcHHHHHHHhCCHH
Q 040650 2 HKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGD-GGVITEI-ASSESLAKLTS-NDETALILAVKNSQID 78 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~-~~~~~~l-~~~~~~~~~~~-~~~t~l~~a~~~~~~~ 78 (136)
|+|+..++.+++++|++.|.+++ ..+..|.||||+|+..+. .+++++| ..+++++..+. .|.||||+|+..++.+
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~~~--~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 191 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQDVD--MMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT 191 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHH
T ss_pred HHHHHcCHHHHHHHHHhcCCCcc--ccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHH
Confidence 45555555555555555555554 555555555555554333 4555555 55555555554 5666666666666666
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccC
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLY 127 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~ 127 (136)
++++|+++|++ ++.+|..|.||+++|+..| .+++++|++.++.
T Consensus 192 ~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 192 VISLLLEAGAN------VDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp HHHHHHHHTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 66666666666 4566666666666666666 6666666666654
No 89
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=2.8e-25 Score=148.25 Aligned_cols=120 Identities=23% Similarity=0.256 Sum_probs=79.1
Q ss_pred CchhhhcCChhhhhHhhc-cCCCCCcccccCCCCcHHHHHHHcCC----hhhHHHh-hcccCccccCCCCCcHHHHHHHh
Q 040650 1 MHKALVEGDGEVVHFLGK-LDLESRPVVEDNGLMTPLHRAAVDGD----GGVITEI-ASSESLAKLTSNDETALILAVKN 74 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~g~~~l~~a~~~~~----~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~ 74 (136)
||+|+..|+.+++++|++ .|.+++ ..+..|.++++.++..+. .+++++| ..|++++.+|..|.||||+|+..
T Consensus 172 L~~A~~~g~~~~v~~LL~~~gad~n--~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~ 249 (337)
T 4g8k_A 172 LMDAAEKGHVEVLKILLDEMGADVN--ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK 249 (337)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCCCTT--CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHhccCCCcC--ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh
Confidence 467788888888888875 466666 666666676666555433 2355555 66666666666666777777777
Q ss_pred CCHHHHHHHHHH-hhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 75 SQIDAFKILMEE-TKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 75 ~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
++.+++++|+.. |++ ++.+|..|+||||+|+..| .+++++|+++|+++
T Consensus 250 ~~~~~v~~Ll~~~~~~------vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 250 KHLGLVQRLLEQEHIE------INDTDSDGKTALLLAVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp TCHHHHHHHHTSTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSS
T ss_pred hhhHHHHHHHHhcCCc------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 766666666653 444 5566666677777776666 66667776666654
No 90
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=3.6e-25 Score=149.76 Aligned_cols=127 Identities=23% Similarity=0.301 Sum_probs=74.2
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcc---cCccccCCCCCcHHHHHHHhC-
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASS---ESLAKLTSNDETALILAVKNS- 75 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~---~~~~~~~~~~~t~l~~a~~~~- 75 (136)
||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++| ..+ .+++..|..|.||||+|+..+
T Consensus 170 L~~A~~~g~~~iv~~Ll~~ga~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~ 247 (373)
T 2fo1_E 170 LMLAVLARRRRLVAYLMKAGADPT--IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEG 247 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSC--CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCS
T ss_pred HHHHHHcChHHHHHHHHHCCCCCc--ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCC
Confidence 466666666666666666666665 5566666666666666666666665 433 444444555555555555444
Q ss_pred --CHHHHHHHHHHhhhcc-----------------------------------h-hhhhcccccCCChHHHHHHhcC-HH
Q 040650 76 --QIDAFKILMEETKRHN-----------------------------------L-EHLFSATDKEGNSILHLAALNK-LI 116 (136)
Q Consensus 76 --~~~~~~~Ll~~~~~~~-----------------------------------~-~~~~~~~~~~~~t~l~~a~~~~-~~ 116 (136)
+.+++++|+++|++++ . ...++.+|..|+||||+|+..| .+
T Consensus 248 ~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~ 327 (373)
T 2fo1_E 248 RDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE 327 (373)
T ss_dssp TTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHH
Confidence 4444455544444321 0 0115566777777777777777 77
Q ss_pred HHHHHHHhccCcc
Q 040650 117 VVKILMLRMLYPV 129 (136)
Q Consensus 117 ~~~~Ll~~g~~~~ 129 (136)
++++|+++|+++.
T Consensus 328 iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 328 VVMYLIQQGASVE 340 (373)
T ss_dssp HHHHHHHTTCCSS
T ss_pred HHHHHHHcCCCcc
Confidence 7777777776543
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=2.4e-24 Score=126.99 Aligned_cols=98 Identities=20% Similarity=0.182 Sum_probs=92.5
Q ss_pred cccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCCh
Q 040650 27 VEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNS 105 (136)
Q Consensus 27 ~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t 105 (136)
..|..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|+|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL------VNTTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc------ccCcCCCCCC
Confidence 4688999999999999999999999 99999999999999999999999999999999999998 7799999999
Q ss_pred HHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 106 ILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 106 ~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
|||+|+..| .+++++|+++|+++..
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~ 104 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNA 104 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999 9999999999987643
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3.4e-25 Score=136.60 Aligned_cols=121 Identities=18% Similarity=0.160 Sum_probs=105.5
Q ss_pred hhhhcCChhhhhHhhccCCCCCc---------ccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHH
Q 040650 3 KALVEGDGEVVHFLGKLDLESRP---------VVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAV 72 (136)
Q Consensus 3 ~a~~~~~~~~~~~ll~~~~~~~~---------~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~ 72 (136)
.|++.+..+++++|++.+....+ ...+..|.||||+|+..|+.++++.| . +.+++.+|..|.||||+|+
T Consensus 6 ~aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~ 84 (183)
T 3deo_A 6 IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVA 84 (183)
T ss_dssp EEEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHH
T ss_pred HHHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHH
Confidence 57788899999999975433320 01245789999999999999999999 8 9999999999999999999
Q ss_pred HhCCHHHHHHHHHHhhhcchhhhhcccc-cCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 73 KNSQIDAFKILMEETKRHNLEHLFSATD-KEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 73 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
..|+.+++++|+++|++ ++.++ ..|+||||+|+..| .+++++|+++|+++..
T Consensus 85 ~~~~~~~v~~Ll~~ga~------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 85 GLGSDKCVRLLAEAGAD------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV 138 (183)
T ss_dssp HHTCHHHHHHHHHTTCC------TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred HcCCHHHHHHHHHcCCC------CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcC
Confidence 99999999999999998 66888 89999999999999 9999999999987653
No 93
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=1.7e-24 Score=127.61 Aligned_cols=101 Identities=12% Similarity=0.032 Sum_probs=94.1
Q ss_pred CCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhccc
Q 040650 21 LESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSAT 99 (136)
Q Consensus 21 ~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 99 (136)
++++ ..+..|.||||+|+..|+.+++++| +.+++++.+|..|.||||+|+. ++.+++++|+++|++ ++.+
T Consensus 3 ~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~------~~~~ 73 (136)
T 1d9s_A 3 PGIH--MLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE------PNCA 73 (136)
T ss_dssp CCCS--CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC------SSCC
T ss_pred CCcc--CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC------CCCc
Confidence 4455 8899999999999999999999999 8899999999999999999999 999999999999998 7799
Q ss_pred ccC-CChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 100 DKE-GNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 100 ~~~-~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
|.. |+||||+|+..| .+++++|+++|+++..
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 106 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDV 106 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 999 999999999999 9999999999987543
No 94
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=4.7e-24 Score=142.31 Aligned_cols=121 Identities=20% Similarity=0.206 Sum_probs=113.6
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccC-CCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDN-GLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||.|++.|+.++|++|+++|++++ ..+. .|+||||+|+..|+.+++++| +.|++++.++..+.+|++.++..+...
T Consensus 29 L~~Av~~g~~~~V~~LL~~Gadvn--~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~ 106 (337)
T 4g8k_A 29 LIKAVQNEDVDLVQQLLEGGANVN--FQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVK 106 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC--ccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccch
Confidence 588999999999999999999998 6664 599999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCcc
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
++..++..+++ ++.+|..|.||+|+|+..| .+++++|+++|+.+.
T Consensus 107 ~~~~~~~~~~~------~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~ 152 (337)
T 4g8k_A 107 LLKLFLSKGAD------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN 152 (337)
T ss_dssp HHHHHHTTTCC------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hhHHhhhccch------hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcc
Confidence 99999999888 7799999999999999999 999999999998653
No 95
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=2.1e-25 Score=138.08 Aligned_cols=120 Identities=12% Similarity=0.019 Sum_probs=105.1
Q ss_pred CchhhhcCChhhhhHhhccCCCCCccccc-CCCCcHHHHHHHcCCh----hhHHHh-hcccCccccCCCCCcHHHHHHHh
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVED-NGLMTPLHRAAVDGDG----GVITEI-ASSESLAKLTSNDETALILAVKN 74 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~g~~~l~~a~~~~~~----~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~ 74 (136)
|+.|++.|+.+.++.+++.+. + ..+ ..|+||||+|+..++. +++++| ..|++++.+|..|+||||+|+..
T Consensus 10 l~~Aa~~g~~~~~~~l~~~~~--~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 10 VSAAAMLGTYEDFLELFEKGY--E--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp HHHHHHHSCHHHHHHHHHHSS--S--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCc--c--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 468999999999999998764 3 344 7899999999999975 489999 99999999999999999999999
Q ss_pred CC------HHHHHHHHHHhhhcchhhhhcccccCCC-hHHHHHHhcC------HHHHHHHHH-hccCccc
Q 040650 75 SQ------IDAFKILMEETKRHNLEHLFSATDKEGN-SILHLAALNK------LIVVKILML-RMLYPVS 130 (136)
Q Consensus 75 ~~------~~~~~~Ll~~~~~~~~~~~~~~~~~~~~-t~l~~a~~~~------~~~~~~Ll~-~g~~~~~ 130 (136)
++ .+++++|+++|++ ++.+|..|+ ||||+|+..+ .+++++|++ +|+++..
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gad------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~ 149 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGAD------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI 149 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCC------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC
T ss_pred CCcchhhHHHHHHHHHHCCCC------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc
Confidence 87 5789999999999 779999999 9999999843 469999999 8887653
No 96
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=1.3e-24 Score=124.62 Aligned_cols=99 Identities=26% Similarity=0.321 Sum_probs=91.4
Q ss_pred cccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCCh
Q 040650 27 VEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNS 105 (136)
Q Consensus 27 ~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t 105 (136)
..|..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD------VNARSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC------TTCCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------CcccCCCCCC
Confidence 4688999999999999999999999 88999999999999999999999999999999999988 7799999999
Q ss_pred HHHHHHhcC-HHHHHHHHHhccCccch
Q 040650 106 ILHLAALNK-LIVVKILMLRMLYPVSY 131 (136)
Q Consensus 106 ~l~~a~~~~-~~~~~~Ll~~g~~~~~~ 131 (136)
|||+|+..| .+++++|+++|+++...
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga~~n~~ 104 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGADVNAR 104 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSSSHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCcC
Confidence 999999999 99999999999876543
No 97
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=4.5e-24 Score=135.97 Aligned_cols=112 Identities=16% Similarity=0.119 Sum_probs=93.1
Q ss_pred hhHhhccCCCCC-cccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhc
Q 040650 13 VHFLGKLDLESR-PVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRH 90 (136)
Q Consensus 13 ~~~ll~~~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 90 (136)
++.|++.+.+++ .+..+..+.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~- 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN- 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 467888887776 123345667889999999999999999 99999999999999999999999999999999999998
Q ss_pred chhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 91 NLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 91 ~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
++.+|..|+||||+|+..| .+++++|+++|+++..
T Consensus 80 -----~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 115 (229)
T 2vge_A 80 -----VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA 115 (229)
T ss_dssp -----TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred -----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 7799999999999999999 9999999999987654
No 98
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=5.2e-24 Score=117.89 Aligned_cols=87 Identities=29% Similarity=0.379 Sum_probs=83.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..|..|.||||+|+..|+.+++++| +.+++++.+|..|.||||+|+..++.++
T Consensus 6 L~~A~~~~~~~~v~~Ll~~g~~~n--~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~ 83 (93)
T 1n0q_A 6 LHLAARNGHLEVVKLLLEAGADVN--AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV 83 (93)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhh
Q 040650 80 FKILMEETKR 89 (136)
Q Consensus 80 ~~~Ll~~~~~ 89 (136)
+++|+++|++
T Consensus 84 ~~~Ll~~ga~ 93 (93)
T 1n0q_A 84 VKLLLEAGAY 93 (93)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHcCCC
Confidence 9999998863
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=8.2e-24 Score=122.65 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=88.5
Q ss_pred ccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChH
Q 040650 28 EDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSI 106 (136)
Q Consensus 28 ~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~ 106 (136)
.+..|.+|||+|+..|+.+++++| ..+.+++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|+||
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~tp 76 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------INAPDKHHITP 76 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------TTCCCTTSCCH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCCH
Confidence 356788999999999999999999 99999999999999999999999999999999999988 77999999999
Q ss_pred HHHHHhcC-HHHHHHHHHhccCccc
Q 040650 107 LHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 107 l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
||+|+..| .+++++|+++|+++..
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~~~~ 101 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGADKTV 101 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999 9999999999987653
No 100
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.90 E-value=1.3e-23 Score=139.97 Aligned_cols=117 Identities=18% Similarity=0.165 Sum_probs=105.2
Q ss_pred chhhhcCChhhhhHhhccCCCCCccc-ccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCC---
Q 040650 2 HKALVEGDGEVVHFLGKLDLESRPVV-EDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQ--- 76 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~--- 76 (136)
|.|+..+..++++.|++.|.+++ . .|..|.||||+|+..|+.+++++| +.|++++.+|..|.||||+|+..|+
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn--~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~ 179 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLN--IPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSC--SCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHH
T ss_pred HHHHHhhHHHHHHHHHhcCCCcc--cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccccc
Confidence 56677777889999999999998 7 799999999999999999999999 9999999999999999999999998
Q ss_pred HHHHHHHHHHh-hhcchhhhhcccccCCChHHHHHHh----cC-HHHHHHHHHhcc
Q 040650 77 IDAFKILMEET-KRHNLEHLFSATDKEGNSILHLAAL----NK-LIVVKILMLRML 126 (136)
Q Consensus 77 ~~~~~~Ll~~~-~~~~~~~~~~~~~~~~~t~l~~a~~----~~-~~~~~~Ll~~g~ 126 (136)
.++++.|++.+ ++ ++.+|..|+||||+|+. .| .+++++|++.++
T Consensus 180 ~~~~~~ll~~~~~~------~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~ 229 (327)
T 1sw6_A 180 SGTFEALLDYLYPC------LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILM 229 (327)
T ss_dssp TTCHHHHHHHHGGG------GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcc------ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHH
Confidence 67888888886 55 77999999999999998 88 999999998853
No 101
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=6.2e-24 Score=121.78 Aligned_cols=99 Identities=22% Similarity=0.240 Sum_probs=92.1
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.+.+++ ..|..|.||||+|+..++.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 13 L~~A~~~~~~~~~~~Ll~~g~~~~--~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~ 90 (115)
T 2l6b_A 13 LHNAAKNGHAEEVKKLLSKGADVN--ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEI 90 (115)
T ss_dssp HHHHHHHTCHHHHHHHTTTTCCSS--CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHH
Confidence 589999999999999999999988 8899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHH
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSIL 107 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l 107 (136)
+++|+++|++ ++.++..+.+|-
T Consensus 91 ~~~Ll~~ga~------~n~~~~~~~~~~ 112 (115)
T 2l6b_A 91 VKLLDAKGAD------VNARSWGSSHHH 112 (115)
T ss_dssp HHHHHTTSSS------HHHHSCCCC---
T ss_pred HHHHHHcCCC------CCcCCccccccc
Confidence 9999999999 778999998884
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.89 E-value=5.5e-25 Score=148.97 Aligned_cols=119 Identities=18% Similarity=0.106 Sum_probs=97.8
Q ss_pred CchhhhcCChhhhhHhhccCCCCC-cccccCCCCcHHHHHHHcCChhhHHHh-hcccC---ccccCCCCCcHHHHHHHhC
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESR-PVVEDNGLMTPLHRAAVDGDGGVITEI-ASSES---LAKLTSNDETALILAVKNS 75 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~---~~~~~~~~~t~l~~a~~~~ 75 (136)
||+|++.|+.+++++|++.|.+.. ....+..|.||||+|+..|+.+++++| +.+++ .+..+.. .||||+|+..|
T Consensus 96 Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G 174 (376)
T 2aja_A 96 CFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENG 174 (376)
T ss_dssp HHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCC
Confidence 589999999999999999987331 013445678999999999999999999 88864 2222223 89999999999
Q ss_pred CHHHHHHHHHHhhhcchhhhhcc--cccCCChHHHHHH-hcC-HHHHHHHHHhcc
Q 040650 76 QIDAFKILMEETKRHNLEHLFSA--TDKEGNSILHLAA-LNK-LIVVKILMLRML 126 (136)
Q Consensus 76 ~~~~~~~Ll~~~~~~~~~~~~~~--~~~~~~t~l~~a~-~~~-~~~~~~Ll~~g~ 126 (136)
+.+++++|+++|++ ++. .|..|.||||+|+ ..| .+++++|+++|+
T Consensus 175 ~~eiv~~Ll~~ga~------~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 175 HLHVLNRLCELAPT------EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp CHHHHHHHHHSCGG------GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred CHHHHHHHHHcCCc------cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 99999999999998 445 8888999999999 999 999999998774
No 103
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=7.7e-23 Score=120.48 Aligned_cols=96 Identities=22% Similarity=0.254 Sum_probs=89.1
Q ss_pred ccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChH
Q 040650 28 EDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSI 106 (136)
Q Consensus 28 ~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~ 106 (136)
....+.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD------VNAVDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCCH
Confidence 345678999999999999999999 99999999999999999999999999999999999998 77999999999
Q ss_pred HHHHHhcC-HHHHHHHHHhccCcc
Q 040650 107 LHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 107 l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
||+|+..| .+++++|+++|+++.
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~~~ 107 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGADVN 107 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCc
Confidence 99999999 999999999998764
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=1e-23 Score=135.38 Aligned_cols=94 Identities=21% Similarity=0.213 Sum_probs=88.3
Q ss_pred cCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccc-cCCChH
Q 040650 29 DNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATD-KEGNSI 106 (136)
Q Consensus 29 ~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~~~t~ 106 (136)
+..|.||||+|+..|+.++++.| . +++++.+|..|.||||+|+..|+.+++++|+++|++ ++.++ ..|+||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~g~t~ 114 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------LDHRDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------TTCCCSSSCCCH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCcCCCCCCCCH
Confidence 45789999999999999999999 8 999999999999999999999999999999999998 66888 889999
Q ss_pred HHHHHhcC-HHHHHHHHHhccCcc
Q 040650 107 LHLAALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 107 l~~a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
||+|+..| .+++++|+++|+++.
T Consensus 115 L~~A~~~g~~~~v~~Ll~~ga~~~ 138 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELGADIE 138 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999 999999999998764
No 105
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=3.1e-23 Score=136.88 Aligned_cols=100 Identities=18% Similarity=0.109 Sum_probs=89.4
Q ss_pred Cchhhhc---CChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCC
Q 040650 1 MHKALVE---GDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQ 76 (136)
Q Consensus 1 l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~ 76 (136)
||+|+.. ++.+++++|++.|++++ ..|..|.||||+|+..|+.+++++| +.|++++.+|..|.||||+|+..++
T Consensus 194 Lh~A~~~~~~~~~~iv~~Ll~~gadvn--~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~ 271 (301)
T 2b0o_E 194 LHLAVKVANQASLPLVDFIIQNGGHLD--AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH 271 (301)
T ss_dssp HHHHHHTCCTTTHHHHHHHHHHSSCTT--CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHhcccCcHHHHHHHHhcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 5889987 89999999999999998 8999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC
Q 040650 77 IDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK 114 (136)
Q Consensus 77 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~ 114 (136)
.+++++|+++|++ .|.||||+|+..|
T Consensus 272 ~~iv~~Ll~~ga~------------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 272 KECEELLEQAQAG------------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHHHHHHHH------------TTSSCCC------
T ss_pred HHHHHHHHHhcCC------------CCCChhHHHHhcC
Confidence 9999999999876 5789999999887
No 106
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=3.4e-22 Score=115.70 Aligned_cols=93 Identities=34% Similarity=0.409 Sum_probs=88.2
Q ss_pred CCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCChHHHH
Q 040650 31 GLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNSILHL 109 (136)
Q Consensus 31 ~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~ 109 (136)
+|.||||+|+..|+.+++++| ..+.+++..+..|.||||+|+..++.+++++|+++|++ ++.+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC------CcccCCCCCcHHHH
Confidence 489999999999999999999 88999999999999999999999999999999999988 77999999999999
Q ss_pred HHhcC-HHHHHHHHHhccCcc
Q 040650 110 AALNK-LIVVKILMLRMLYPV 129 (136)
Q Consensus 110 a~~~~-~~~~~~Ll~~g~~~~ 129 (136)
|+..| .+++++|+++|+.+.
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~~ 95 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADVN 95 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHcChHHHHHHHHHcCCCCc
Confidence 99999 999999999998754
No 107
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.88 E-value=1e-22 Score=116.01 Aligned_cols=89 Identities=26% Similarity=0.318 Sum_probs=82.8
Q ss_pred cccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHHhhhcchhhhhcccccCCCh
Q 040650 27 VEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEETKRHNLEHLFSATDKEGNS 105 (136)
Q Consensus 27 ~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t 105 (136)
..+.+|.|+||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~t 92 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------VXAQDKFGKT 92 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCC
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------ccccccCCCc
Confidence 5678899999999999999999999 88999999999999999999999999999999999998 7799999999
Q ss_pred HHHHHHhcC-HHHHHHH
Q 040650 106 ILHLAALNK-LIVVKIL 121 (136)
Q Consensus 106 ~l~~a~~~~-~~~~~~L 121 (136)
|||+|+..| .+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 999999999 9999987
No 108
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=8.2e-23 Score=122.95 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=80.5
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCc-HHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMT-PLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQID 78 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~-~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~ 78 (136)
||+|+ .|+.+++++|++.|.+++ ..+..|.| |||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.+
T Consensus 49 L~~A~-~~~~~~v~~Ll~~g~~~~--~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 49 IQVMM-MGSARVAELLLLHGAEPN--CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 125 (156)
T ss_dssp TTSSC-TTCHHHHHHHHTTTCCCC--CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHH-cCCHHHHHHHHHcCCCCC--CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHH
Confidence 67875 899999999999999998 89999999 99999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhcccccCCChHHHHH
Q 040650 79 AFKILMEETKRHNLEHLFSATDKEGNSILHLA 110 (136)
Q Consensus 79 ~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a 110 (136)
++++|+++|++ ++.++..|.||.+-+
T Consensus 126 ~v~~Ll~~ga~------~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 126 VARYLRAAAGG------TRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHSSCC-----------------------
T ss_pred HHHHHHHcCCC------CCccCcCcCcccccC
Confidence 99999999999 679999999997643
No 109
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=2.5e-22 Score=127.06 Aligned_cols=97 Identities=23% Similarity=0.306 Sum_probs=90.5
Q ss_pred ccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHHHHHHHHH-hhhcchhhhhcccccCCCh
Q 040650 28 EDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDAFKILMEE-TKRHNLEHLFSATDKEGNS 105 (136)
Q Consensus 28 ~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~t 105 (136)
.+..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..|+.+++++|+++ |++ ++.+|..|+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------~~~~d~~g~t 142 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE------LNQQNKLGDT 142 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC------CCCCCTTSCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC------ccccCCCCCC
Confidence 355678999999999999999999 99999999999999999999999999999999998 888 7799999999
Q ss_pred HHHHHHhcC-HHHHHHHHHhccCccc
Q 040650 106 ILHLAALNK-LIVVKILMLRMLYPVS 130 (136)
Q Consensus 106 ~l~~a~~~~-~~~~~~Ll~~g~~~~~ 130 (136)
|||+|+..| .+++++|+++|+++..
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~~~~ 168 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGARTDL 168 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 999999999 9999999999987653
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=5.2e-23 Score=139.33 Aligned_cols=114 Identities=12% Similarity=0.046 Sum_probs=98.3
Q ss_pred CchhhhcCChhhhhHhhccCCCCCc-ccccCCCCcHHHHHHHcCChhhHHHh-hcccCccc--cCCCCCcHHHHHH-HhC
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRP-VVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAK--LTSNDETALILAV-KNS 75 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~--~~~~~~t~l~~a~-~~~ 75 (136)
||+|++.|+.+++++|+++|+++.. +..+.+ .||||+|+..|+.+++++| +.+++++. .|..|.||||+|+ ..|
T Consensus 132 L~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G 210 (376)
T 2aja_A 132 FRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG 210 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCC
Confidence 5899999999999999999975210 022223 8999999999999999999 99999877 7888999999999 999
Q ss_pred CHHHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC-HHHHHHHHHhccCc
Q 040650 76 QIDAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK-LIVVKILMLRMLYP 128 (136)
Q Consensus 76 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~Ll~~g~~~ 128 (136)
+.+++++|+++|+. |.||+++|+..| .+++++|+++|+..
T Consensus 211 ~~eiv~~Ll~~ga~-------------~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 211 HHNVINFLLDCPVM-------------LAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp CHHHHHHHTTSHHH-------------HHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCc-------------cchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 99999999987642 679999999999 99999999998753
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=2.8e-20 Score=105.84 Aligned_cols=81 Identities=23% Similarity=0.278 Sum_probs=77.7
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|.+++ ..|..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 28 L~~A~~~g~~~~v~~Ll~~g~~i~--~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~ 105 (110)
T 2zgd_A 28 LLEAARAGQDDEVRILMANGADVA--AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDL 105 (110)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHH
Confidence 589999999999999999999988 8899999999999999999999999 8899999999999999999999999999
Q ss_pred HHHH
Q 040650 80 FKIL 83 (136)
Q Consensus 80 ~~~L 83 (136)
+++|
T Consensus 106 ~~~L 109 (110)
T 2zgd_A 106 AEIL 109 (110)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9886
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.5e-20 Score=121.78 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=83.9
Q ss_pred Cchhhhc---CChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCC
Q 040650 1 MHKALVE---GDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQ 76 (136)
Q Consensus 1 l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~ 76 (136)
||+|+.. ++.+++++|++.|++++ ..|..|.||||+|+..|+.+++++| ..|++++.+|..|.||||+|+..|+
T Consensus 173 Lh~A~~~~~~~~~~~v~~Ll~~ga~in--~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 250 (278)
T 1dcq_A 173 LHLAVRSVDRTSLHIVDFLVQNSGNLD--KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH 250 (278)
T ss_dssp HHHHHHHCCTTTHHHHHHHHHHCSCTT--CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHhcccchHHHHHHHHHCCCCcc--ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCC
Confidence 5899999 89999999999999998 8999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhhh
Q 040650 77 IDAFKILMEETKR 89 (136)
Q Consensus 77 ~~~~~~Ll~~~~~ 89 (136)
.+++++|+++|+.
T Consensus 251 ~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 251 EHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999886
No 113
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=2.5e-20 Score=130.30 Aligned_cols=87 Identities=18% Similarity=0.173 Sum_probs=82.8
Q ss_pred Cchhhh---cCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCC
Q 040650 1 MHKALV---EGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQ 76 (136)
Q Consensus 1 l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~ 76 (136)
||+||+ .|+.+++++|++.|++++ ..|..|+||||+|+..|+.+++++| ..|++++.+|..|.||||+|+..|+
T Consensus 175 Lh~A~~~a~~g~~~~v~~Ll~~ga~vn--~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 252 (497)
T 3lvq_E 175 LHLAVKVANQASLPLVDFIIQNGGHLD--AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH 252 (497)
T ss_dssp HHHHHHTCCTTTHHHHHHHHHHSCCTT--CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHhcccccHHHHHHHHHcCCCCC--ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 588955 999999999999999998 9999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhhh
Q 040650 77 IDAFKILMEETKR 89 (136)
Q Consensus 77 ~~~~~~Ll~~~~~ 89 (136)
.+++++|+++|++
T Consensus 253 ~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 253 KECEELLEQAQAG 265 (497)
T ss_dssp HHHHHHHHHTCC-
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999998
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=9.7e-20 Score=123.03 Aligned_cols=120 Identities=17% Similarity=0.128 Sum_probs=82.8
Q ss_pred CchhhhcCChhhhhHhhccCCCCCcccccCCCCcHHHHHHHcCChhhHHHh-hcccCccccCCCCCcHHHHHHHhCCHHH
Q 040650 1 MHKALVEGDGEVVHFLGKLDLESRPVVEDNGLMTPLHRAAVDGDGGVITEI-ASSESLAKLTSNDETALILAVKNSQIDA 79 (136)
Q Consensus 1 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l-~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 79 (136)
||+|+..|+.+++++|++.|++++ ..|..|.||||+|+..|+.+++++| ..+++++.+|..|.||||+|+..++.++
T Consensus 239 Lh~Aa~~g~~~iv~~LL~~Gadvn--~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~i 316 (368)
T 3jue_A 239 LIQATAANSLLACEFLLQNGANVN--QADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADI 316 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHH
Confidence 689999999999999999999998 8999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC---HHHHHHHHHhc
Q 040650 80 FKILMEETKRHNLEHLFSATDKEGNSILHLAALNK---LIVVKILMLRM 125 (136)
Q Consensus 80 ~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~---~~~~~~Ll~~g 125 (136)
+++|+..+.... .....+..+.|+++++.... .+..+.|...+
T Consensus 317 v~lLl~~~~~~~---~~~~~~~~~~t~l~i~~~~~~~~~~~~ekl~r~~ 362 (368)
T 3jue_A 317 VTLLRLAKMREA---EAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRS 362 (368)
T ss_dssp HHHHHHHHC----------------------------------------
T ss_pred HHHHHHcCCCcc---cccccCCCCCCHHHHHHHHHhhcCCCHHHHHhcC
Confidence 999998874421 13355677889988776654 34445555444
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=64.77 E-value=3.3 Score=18.13 Aligned_cols=16 Identities=31% Similarity=0.254 Sum_probs=12.4
Q ss_pred chhhhcCChhhhhHhh
Q 040650 2 HKALVEGDGEVVHFLG 17 (136)
Q Consensus 2 ~~a~~~~~~~~~~~ll 17 (136)
..||..|+++.++.|-
T Consensus 18 yvA~seGd~etv~~Le 33 (40)
T 1gp8_A 18 DAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHTTSCHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHH
Confidence 3688889988888764
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=30.84 E-value=1.4e+02 Score=20.98 Aligned_cols=24 Identities=25% Similarity=0.367 Sum_probs=16.2
Q ss_pred CCChHHHHHHhcC-HHHHHHHHHhc
Q 040650 102 EGNSILHLAALNK-LIVVKILMLRM 125 (136)
Q Consensus 102 ~~~t~l~~a~~~~-~~~~~~Ll~~g 125 (136)
-|.|.+|+|.+.. .+++..|+..+
T Consensus 68 ~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 68 VGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCchhhhhhhhhhhhhHHHHhhhcc
Confidence 5677777777776 77777776533
No 117
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=28.04 E-value=47 Score=16.00 Aligned_cols=21 Identities=19% Similarity=0.072 Sum_probs=15.3
Q ss_pred cCCChHHHHHHhcC--HHHHHHH
Q 040650 101 KEGNSILHLAALNK--LIVVKIL 121 (136)
Q Consensus 101 ~~~~t~l~~a~~~~--~~~~~~L 121 (136)
..|.|+-.+|+..+ .+..+.-
T Consensus 16 ~QGMTaGEVAA~f~w~Le~ar~a 38 (68)
T 3i71_A 16 RQGMTAGEVAAHFGWPLEKARNA 38 (68)
T ss_dssp TTCBCHHHHHHHHTCCHHHHHHH
T ss_pred hccccHHHHHHHhCCcHHHHHHH
Confidence 37889999999888 5554443
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=27.53 E-value=1.6e+02 Score=20.67 Aligned_cols=25 Identities=28% Similarity=0.333 Sum_probs=19.2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHHh
Q 040650 63 NDETALILAVKNSQIDAFKILMEET 87 (136)
Q Consensus 63 ~~~t~l~~a~~~~~~~~~~~Ll~~~ 87 (136)
-|.|.+|+|++..+.+++..|+..+
T Consensus 68 ~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 68 VGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCchhhhhhhhhhhhhHHHHhhhcc
Confidence 5778888888888888888877643
No 119
>3eyi_A Z-DNA-binding protein 1; alternative splicing, DNA-binding, polymorphism, DNA binding protein/Z-DNA complex, DNA binding protein/DNA complex; 1.45A {Homo sapiens} PDB: 2l4m_A
Probab=27.26 E-value=61 Score=16.31 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=15.0
Q ss_pred HHHHHHHHHhhhcchhhhhcccccCCChHHHHHHhcC
Q 040650 78 DAFKILMEETKRHNLEHLFSATDKEGNSILHLAALNK 114 (136)
Q Consensus 78 ~~~~~Ll~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~ 114 (136)
.+.++|...|+. ++|++|-..|
T Consensus 14 ~I~~fL~~~Gp~---------------~AL~IAK~LG 35 (72)
T 3eyi_A 14 DIYRFLKDNGPQ---------------RALVIAQALG 35 (72)
T ss_dssp HHHHHHHHHCSE---------------EHHHHHHHTT
T ss_pred HHHHHHHHcCCc---------------hHHHHHHHhC
Confidence 466777766655 7777777666
No 120
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=25.51 E-value=1.2e+02 Score=18.33 Aligned_cols=19 Identities=11% Similarity=0.057 Sum_probs=11.3
Q ss_pred HHHHHHhcC-HHHHHHHHHh
Q 040650 106 ILHLAALNK-LIVVKILMLR 124 (136)
Q Consensus 106 ~l~~a~~~~-~~~~~~Ll~~ 124 (136)
+...|..+| .++++-+++.
T Consensus 121 A~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 121 AYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHH
Confidence 344566677 6666666543
Done!