Query 040658
Match_columns 287
No_of_seqs 196 out of 1190
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 10:32:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040658.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040658hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 6.6E-67 1.4E-71 479.6 27.9 280 8-287 7-287 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 7.3E-62 1.6E-66 442.0 23.0 256 28-287 1-256 (315)
3 PRK15381 pathogenicity island 100.0 7.4E-50 1.6E-54 369.3 20.4 205 25-287 140-347 (408)
4 cd01847 Triacylglycerol_lipase 100.0 1.6E-48 3.5E-53 349.0 19.4 221 27-287 1-225 (281)
5 cd01846 fatty_acyltransferase_ 100.0 2.5E-43 5.5E-48 313.4 20.3 217 29-287 1-219 (270)
6 COG3240 Phospholipase/lecithin 99.9 3.8E-26 8.2E-31 204.4 12.4 240 24-287 26-276 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 7.4E-21 1.6E-25 163.7 12.1 201 30-285 1-210 (234)
8 cd01839 SGNH_arylesterase_like 98.6 1.2E-06 2.6E-11 74.7 12.6 174 29-278 1-180 (208)
9 cd01832 SGNH_hydrolase_like_1 98.5 2.2E-06 4.7E-11 71.4 12.0 154 29-277 1-155 (185)
10 cd01836 FeeA_FeeB_like SGNH_hy 98.4 4.8E-06 1E-10 69.8 12.6 94 157-277 67-161 (191)
11 cd01823 SEST_like SEST_like. A 98.4 8.4E-06 1.8E-10 71.7 13.3 196 29-278 2-216 (259)
12 cd04501 SGNH_hydrolase_like_4 98.2 3.2E-05 6.9E-10 64.3 13.3 92 158-280 60-151 (183)
13 cd01830 XynE_like SGNH_hydrola 98.1 6.3E-05 1.4E-09 63.9 12.8 56 159-221 76-131 (204)
14 PF13472 Lipase_GDSL_2: GDSL-l 98.1 8.5E-05 1.8E-09 60.3 12.5 93 159-279 63-155 (179)
15 cd01844 SGNH_hydrolase_like_6 98.1 0.00017 3.7E-09 59.8 13.9 147 29-277 1-148 (177)
16 cd01827 sialate_O-acetylestera 98.1 0.00012 2.5E-09 61.1 13.0 91 158-278 68-159 (188)
17 cd01838 Isoamyl_acetate_hydrol 98.0 6E-05 1.3E-09 63.0 10.9 104 157-279 63-168 (199)
18 cd01821 Rhamnogalacturan_acety 98.0 0.00013 2.9E-09 61.5 12.8 96 158-282 66-161 (198)
19 cd04506 SGNH_hydrolase_YpmR_li 98.0 0.00011 2.4E-09 62.2 12.1 107 157-279 68-175 (204)
20 PRK10528 multifunctional acyl- 97.8 0.00015 3.3E-09 61.0 9.9 106 27-215 10-115 (191)
21 cd01825 SGNH_hydrolase_peri1 S 97.8 0.00017 3.8E-09 59.9 9.5 91 159-279 58-149 (189)
22 cd01822 Lysophospholipase_L1_l 97.7 0.001 2.3E-08 54.5 12.2 45 158-217 65-109 (177)
23 cd01824 Phospholipase_B_like P 97.6 0.0052 1.1E-07 55.3 16.9 214 26-270 9-239 (288)
24 cd01835 SGNH_hydrolase_like_3 97.5 0.0027 5.9E-08 53.1 13.3 93 157-279 69-161 (193)
25 cd01831 Endoglucanase_E_like E 97.3 0.0062 1.3E-07 49.9 12.1 46 159-216 57-103 (169)
26 cd01834 SGNH_hydrolase_like_2 97.0 0.0082 1.8E-07 49.6 10.0 101 158-283 62-163 (191)
27 cd01833 XynB_like SGNH_hydrola 96.9 0.0068 1.5E-07 48.8 8.6 90 157-278 40-130 (157)
28 cd00229 SGNH_hydrolase SGNH_hy 96.6 0.015 3.3E-07 46.5 8.7 95 156-279 64-159 (187)
29 cd01841 NnaC_like NnaC (CMP-Ne 96.5 0.012 2.6E-07 48.2 7.7 90 158-279 52-142 (174)
30 cd01829 SGNH_hydrolase_peri2 S 96.4 0.026 5.7E-07 47.2 9.2 95 159-279 61-155 (200)
31 PF14606 Lipase_GDSL_3: GDSL-l 96.1 0.11 2.4E-06 43.2 11.2 127 73-277 21-148 (178)
32 KOG3670 Phospholipase [Lipid t 96.0 0.1 2.2E-06 48.2 11.5 75 128-216 161-237 (397)
33 cd01828 sialate_O-acetylestera 95.9 0.034 7.3E-07 45.3 7.4 85 158-278 49-135 (169)
34 cd04502 SGNH_hydrolase_like_7 95.9 0.12 2.7E-06 42.1 10.5 87 158-279 51-138 (171)
35 cd01820 PAF_acetylesterase_lik 95.4 0.065 1.4E-06 45.7 7.5 87 158-278 90-177 (214)
36 COG2755 TesA Lysophospholipase 94.8 1.1 2.4E-05 37.8 13.4 14 158-171 78-91 (216)
37 cd01826 acyloxyacyl_hydrolase_ 91.9 1.7 3.8E-05 39.2 9.9 55 159-220 124-180 (305)
38 cd01840 SGNH_hydrolase_yrhL_li 90.3 1 2.2E-05 36.0 6.4 13 158-170 51-63 (150)
39 KOG3035 Isoamyl acetate-hydrol 87.9 2.4 5.2E-05 36.3 7.1 106 157-280 68-178 (245)
40 PLN02757 sirohydrochlorine fer 84.3 2.8 6.1E-05 34.0 5.6 54 197-273 60-113 (154)
41 COG2845 Uncharacterized protei 79.9 6.4 0.00014 35.8 6.6 83 158-262 178-263 (354)
42 COG3240 Phospholipase/lecithin 77.6 2.2 4.8E-05 39.4 3.1 69 156-228 97-165 (370)
43 PF02633 Creatininase: Creatin 77.4 14 0.0003 32.0 8.0 82 163-279 62-143 (237)
44 cd03416 CbiX_SirB_N Sirohydroc 74.4 8.2 0.00018 28.4 5.1 52 198-272 47-98 (101)
45 cd00384 ALAD_PBGS Porphobilino 72.7 15 0.00033 33.2 7.0 64 192-273 48-111 (314)
46 PRK13384 delta-aminolevulinic 71.4 16 0.00035 33.1 6.9 63 193-273 59-121 (322)
47 PF00490 ALAD: Delta-aminolevu 70.3 12 0.00026 34.0 5.9 64 194-273 56-119 (324)
48 PF01903 CbiX: CbiX; InterPro 69.7 3 6.6E-05 31.0 1.7 55 198-275 40-94 (105)
49 cd04824 eu_ALAD_PBGS_cysteine_ 68.6 20 0.00043 32.5 6.8 65 193-273 49-114 (320)
50 cd04823 ALAD_PBGS_aspartate_ri 68.1 19 0.00042 32.6 6.7 66 192-273 51-116 (320)
51 PRK09283 delta-aminolevulinic 67.8 20 0.00044 32.6 6.8 63 193-273 57-119 (323)
52 PF07172 GRP: Glycine rich pro 64.3 6.1 0.00013 29.3 2.4 20 1-20 1-21 (95)
53 cd03412 CbiK_N Anaerobic cobal 58.9 37 0.00081 26.3 6.1 52 195-272 56-107 (127)
54 cd03414 CbiX_SirB_C Sirohydroc 58.2 37 0.0008 25.6 5.9 51 197-272 47-97 (117)
55 COG0113 HemB Delta-aminolevuli 55.3 26 0.00055 31.7 5.0 66 192-273 58-123 (330)
56 KOG2794 Delta-aminolevulinic a 55.2 23 0.0005 31.5 4.6 93 157-273 39-131 (340)
57 COG3581 Uncharacterized protei 53.5 19 0.00042 33.7 4.1 46 204-274 328-373 (420)
58 PRK09121 5-methyltetrahydropte 52.7 44 0.00095 30.8 6.5 55 185-253 146-200 (339)
59 PRK13717 conjugal transfer pro 49.2 33 0.00072 26.8 4.2 27 238-264 70-96 (128)
60 PRK06520 5-methyltetrahydropte 48.9 60 0.0013 30.2 6.8 32 185-216 160-191 (368)
61 PF08885 GSCFA: GSCFA family; 46.4 68 0.0015 28.2 6.3 86 190-287 147-232 (251)
62 PF08029 HisG_C: HisG, C-termi 44.0 22 0.00047 25.1 2.3 21 197-217 52-72 (75)
63 PRK13660 hypothetical protein; 43.6 1.5E+02 0.0032 24.8 7.6 27 190-216 24-50 (182)
64 PF06908 DUF1273: Protein of u 43.3 68 0.0015 26.6 5.6 29 188-216 22-50 (177)
65 cd00419 Ferrochelatase_C Ferro 40.5 94 0.002 24.4 5.8 37 197-247 79-115 (135)
66 PF08331 DUF1730: Domain of un 39.7 87 0.0019 22.0 5.0 66 207-273 9-78 (78)
67 COG1031 Uncharacterized Fe-S o 38.8 1E+02 0.0023 29.7 6.5 70 194-275 217-286 (560)
68 cd04236 AAK_NAGS-Urea AAK_NAGS 38.7 1.2E+02 0.0026 27.1 6.7 63 130-219 16-78 (271)
69 TIGR02744 TrbI_Ftype type-F co 38.7 64 0.0014 24.7 4.3 27 238-264 57-83 (112)
70 TIGR03455 HisG_C-term ATP phos 38.3 41 0.00089 25.1 3.2 22 196-217 75-96 (100)
71 KOG4079 Putative mitochondrial 36.4 16 0.00036 28.8 0.8 16 206-221 42-57 (169)
72 TIGR01091 upp uracil phosphori 35.2 98 0.0021 26.2 5.5 49 195-275 136-184 (207)
73 cd03311 CIMS_C_terminal_like C 33.8 1.5E+02 0.0033 26.8 7.0 38 185-223 145-182 (332)
74 PRK06233 hypothetical protein; 32.8 71 0.0015 29.8 4.6 32 185-216 161-192 (372)
75 PRK07807 inosine 5-monophospha 32.1 75 0.0016 30.8 4.7 54 195-276 226-279 (479)
76 cd03411 Ferrochelatase_N Ferro 31.5 54 0.0012 26.5 3.2 23 197-219 101-123 (159)
77 PRK00129 upp uracil phosphorib 31.0 1.6E+02 0.0034 25.0 6.1 47 195-273 138-184 (209)
78 KOG0907 Thioredoxin [Posttrans 30.6 79 0.0017 23.8 3.7 29 251-280 38-66 (106)
79 PLN00123 isocitrate dehydrogen 26.1 1E+02 0.0022 28.7 4.3 36 252-287 205-240 (360)
80 cd01823 SEST_like SEST_like. A 26.0 1.4E+02 0.0029 25.7 5.0 39 239-277 120-158 (259)
81 cd03413 CbiK_C Anaerobic cobal 25.9 65 0.0014 24.1 2.5 18 198-215 45-62 (103)
82 cd03415 CbiX_CbiC Archaeal sir 25.9 64 0.0014 25.1 2.6 19 197-215 46-64 (125)
83 cd03409 Chelatase_Class_II Cla 25.2 98 0.0021 22.3 3.4 23 197-219 47-69 (101)
84 COG1402 Uncharacterized protei 24.8 1E+02 0.0022 27.2 3.8 25 192-216 87-111 (250)
85 PF09677 TrbI_Ftype: Type-F co 24.6 1.4E+02 0.0031 22.7 4.2 26 238-263 56-81 (111)
86 PRK03437 3-isopropylmalate deh 24.5 83 0.0018 29.1 3.4 35 253-287 198-232 (344)
87 TIGR02089 TTC tartrate dehydro 24.1 98 0.0021 28.7 3.8 36 252-287 200-235 (352)
88 PRK00772 3-isopropylmalate deh 23.2 1.3E+02 0.0029 27.9 4.5 38 250-287 199-236 (358)
89 TIGR00109 hemH ferrochelatase. 23.2 2.7E+02 0.0058 25.4 6.5 24 197-220 106-129 (322)
90 cd04506 SGNH_hydrolase_YpmR_li 23.1 2.2E+02 0.0048 23.3 5.6 33 242-274 98-130 (204)
91 TIGR00175 mito_nad_idh isocitr 23.1 1.5E+02 0.0032 27.4 4.7 38 250-287 180-217 (333)
92 PF02896 PEP-utilizers_C: PEP- 23.1 1.7E+02 0.0037 26.4 5.0 18 158-175 196-213 (293)
93 PRK00035 hemH ferrochelatase; 23.0 1.7E+02 0.0037 26.6 5.2 45 196-254 249-293 (333)
94 PRK05222 5-methyltetrahydropte 23.0 3E+02 0.0065 28.4 7.4 31 185-215 571-601 (758)
95 PF00762 Ferrochelatase: Ferro 23.0 5.7E+02 0.012 23.2 8.5 76 198-281 103-198 (316)
96 PRK08997 isocitrate dehydrogen 22.8 1.4E+02 0.0031 27.4 4.6 36 252-287 184-219 (334)
97 PF08282 Hydrolase_3: haloacid 22.6 36 0.00078 28.6 0.6 15 27-41 202-216 (254)
98 PF05984 Cytomega_UL20A: Cytom 22.6 1.7E+02 0.0037 21.1 3.9 39 4-42 3-42 (100)
99 PLN00118 isocitrate dehydrogen 22.4 1.3E+02 0.0029 28.1 4.3 38 250-287 219-256 (372)
100 cd02957 Phd_like Phosducin (Ph 22.1 1.9E+02 0.0042 21.4 4.6 25 252-276 42-66 (113)
101 cd02989 Phd_like_TxnDC9 Phosdu 21.7 1.4E+02 0.0031 22.3 3.8 26 251-276 39-64 (113)
102 TIGR00169 leuB 3-isopropylmala 21.2 1.6E+02 0.0034 27.4 4.5 37 251-287 197-233 (349)
103 PF14681 UPRTase: Uracil phosp 21.1 2.9E+02 0.0063 23.3 5.9 45 196-272 136-182 (207)
104 PRK08194 tartrate dehydrogenas 20.6 1.1E+02 0.0024 28.4 3.4 35 253-287 198-232 (352)
105 CHL00202 argB acetylglutamate 20.1 6.2E+02 0.013 22.5 9.6 63 131-221 6-68 (284)
106 PF07555 NAGidase: beta-N-acet 20.0 1.2E+02 0.0027 27.5 3.6 25 191-215 87-111 (306)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=6.6e-67 Score=479.56 Aligned_cols=280 Identities=43% Similarity=0.721 Sum_probs=234.7
Q ss_pred HHHHHHHHHH-HHHHhCCCCcCEEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCC
Q 040658 8 LATFLFLCLE-LYVINGQPLVPAMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGF 86 (287)
Q Consensus 8 ~~~~~~~~~~-~~~~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl 86 (287)
|+-+|++..+ ...++..+.+++|||||||++|+||++++.+..++++||||++||+++|||||||||+|+||||+.||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl 86 (351)
T PLN03156 7 LIFFLLLAQLLVLVAETCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGL 86 (351)
T ss_pred hHHHHHHHHHHHHHhcccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCC
Confidence 3444444433 334555567999999999999999998876656788999999999877999999999999999999999
Q ss_pred CCCCCCCCCccccCCcccCCceeeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcc
Q 040658 87 TSYPPAYLSEEAKGKNLLIGANFASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSG 166 (287)
Q Consensus 87 ~~~~pp~~~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG 166 (287)
++++|||+++.....++.+|+|||+||+++++.++.....++|..||++|+++++++....|...+++.++++||+||||
T Consensus 87 ~p~~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG 166 (351)
T PLN03156 87 KPAIPAYLDPSYNISDFATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIG 166 (351)
T ss_pred CCCCCCCcCcccCchhhcccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEec
Confidence 43899999875556789999999999999987664323467899999999999888776666544556789999999999
Q ss_pred cchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHH
Q 040658 167 SSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAV 246 (287)
Q Consensus 167 ~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~ 246 (287)
+|||+..++..+......+.+++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.....+..+|.+.+|++++
T Consensus 167 ~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~ 246 (351)
T PLN03156 167 TNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVAL 246 (351)
T ss_pred chhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHH
Confidence 99998765432212223467889999999999999999999999999999999999998765422234689999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 247 SFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 247 ~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
.||++|+++|++|++++||++|+++|+|.+++++++||++|
T Consensus 247 ~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~y 287 (351)
T PLN03156 247 EFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAY 287 (351)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999999987
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=7.3e-62 Score=442.03 Aligned_cols=256 Identities=45% Similarity=0.810 Sum_probs=220.7
Q ss_pred CEEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCCc
Q 040658 28 PAMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIGA 107 (287)
Q Consensus 28 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G~ 107 (287)
++||+||||+||+||+.++.+..+++.||||++||++ |+||||||++|+||||+.+|+|..+|||+.... ..++.+|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~-p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~-~~~~~~G~ 78 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNG-SSDFLTGV 78 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCC-CCccccCCchhhhhhhhhccCCCCCCCccCccc-cchhhccc
Confidence 5799999999999999877554457799999999985 999999999999999999999944777876532 25688999
Q ss_pred eeeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCChh
Q 040658 108 NFASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTPD 187 (287)
Q Consensus 108 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~ 187 (287)
|||+|||++.+.+.....+++|..||++|++++++++...|++++.+..+++||+||||+|||+..+...... ..+.+
T Consensus 79 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~--~~~~~ 156 (315)
T cd01837 79 NFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTR--QYEVE 156 (315)
T ss_pred eecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcCccc--cCCHH
Confidence 9999999998776432356899999999999998877776765566778999999999999998766432210 23567
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcE
Q 040658 188 QFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLN 267 (287)
Q Consensus 188 ~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~ 267 (287)
++++.+++++.++|++||++|||||+|+|+||+||+|.++...+.+..+|.+.+|++++.||++|+++|++|++++|+++
T Consensus 157 ~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~ 236 (315)
T cd01837 157 AYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAK 236 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 89999999999999999999999999999999999999877643334689999999999999999999999999999999
Q ss_pred EEEEecchHHHHHhhCCCCC
Q 040658 268 LVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 268 i~~~D~~~~~~~ii~nP~~Y 287 (287)
|+++|+|++++++++||++|
T Consensus 237 i~~~D~y~~~~~i~~np~~y 256 (315)
T cd01837 237 FVYADIYNALLDLIQNPAKY 256 (315)
T ss_pred EEEEehhHHHHHHHhChhhc
Confidence 99999999999999999987
No 3
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=7.4e-50 Score=369.30 Aligned_cols=205 Identities=20% Similarity=0.282 Sum_probs=173.0
Q ss_pred CCcCEEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCccc
Q 040658 25 PLVPAMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLL 104 (287)
Q Consensus 25 ~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~ 104 (287)
..|++||+|||||||+||+.+..+. ...||||++| +||||||++|+|||| +|||++ .
T Consensus 140 ~~~~ai~vFGDSlsDtGnn~y~~t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA--------~~pyl~--------~ 196 (408)
T PRK15381 140 GDITRLVFFGDSLSDSLGRMFEKTH--HILPSYGQYF-----GGRFTNGFTWTEFLS--------SPHFLG--------K 196 (408)
T ss_pred CCCCeEEEeCCccccCCCccccccc--cCCCCCCCCC-----CcccCCCchhhheec--------cccccC--------C
Confidence 3799999999999999888765432 4689999987 799999999999999 245764 2
Q ss_pred CCceeeecccccccCCCc--c-ccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCccc
Q 040658 105 IGANFASGASGYYETTAK--L-YHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLY 181 (287)
Q Consensus 105 ~G~NfA~gGA~~~~~~~~--~-~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~ 181 (287)
+|+|||+|||+++..... . ...++|..||++|.. .+++||+||+|+|||+. +
T Consensus 197 ~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~-----------------~~~aL~lV~iG~NDy~~-~------- 251 (408)
T PRK15381 197 EMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTP-----------------SHQDLAIFLLGANDYMT-L------- 251 (408)
T ss_pred CCceEeecccccccccccccccCccCCHHHHHHHHHh-----------------cCCcEEEEEeccchHHH-h-------
Confidence 689999999999732111 0 124689999998542 15899999999999983 3
Q ss_pred ccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHh
Q 040658 182 KVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVN 261 (287)
Q Consensus 182 ~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~ 261 (287)
..++++.+|+++.++|++||++|||||+|+|+||+||+|..+.. ...+.+|.+++.||++|+++|++|++
T Consensus 252 ----~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~------~~~~~~N~~a~~fN~~L~~~L~~L~~ 321 (408)
T PRK15381 252 ----HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS------DEKRKLKDESIAHNALLKTNVEELKE 321 (408)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc------CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12467889999999999999999999999999999999988642 23588999999999999999999999
Q ss_pred hCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 262 KLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 262 ~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
++||++|+++|+|+++.++++||++|
T Consensus 322 ~~pg~~ivy~D~y~~~~~ii~nP~~y 347 (408)
T PRK15381 322 KYPQHKICYYETADAFKVIMEAASNI 347 (408)
T ss_pred hCCCCEEEEEEhHHHHHHHHhCHHhc
Confidence 99999999999999999999999887
No 4
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.6e-48 Score=349.04 Aligned_cols=221 Identities=18% Similarity=0.183 Sum_probs=181.9
Q ss_pred cCEEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCC
Q 040658 27 VPAMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIG 106 (287)
Q Consensus 27 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G 106 (287)
|++|||||||++|+||++++. ++ ++|+||||||++++|++++.+|++ ++ ++ ....+..+|
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~--------~~------~~~~gRFsnG~~~~d~~~~~~~~~-~~---~~--~~~~~~~~G 60 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG--------VG------AAGGGRFTVNDGSIWSLGVAEGYG-LT---TG--TATPTTPGG 60 (281)
T ss_pred CCceEEecCcccccCCCCccc--------cC------CCCCcceecCCcchHHHHHHHHcC-CC---cC--cCcccCCCC
Confidence 589999999999999997652 11 128999999999999999999988 33 22 123467889
Q ss_pred ceeeecccccccCCCcc---ccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCc-ccc
Q 040658 107 ANFASGASGYYETTAKL---YHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPL-LYK 182 (287)
Q Consensus 107 ~NfA~gGA~~~~~~~~~---~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~-~~~ 182 (287)
+|||+|||++.+.+... ...++|..||++|++... ...+++||+||||+|||+..+..... ...
T Consensus 61 ~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~------------~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 128 (281)
T cd01847 61 TNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGG------------GFDPNALYTVWIGGNDLIAALAALTTATTT 128 (281)
T ss_pred ceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcC------------CCCCCeEEEEecChhHHHHHHhhccccccc
Confidence 99999999998765321 235799999999987531 23689999999999999976643221 011
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q 040658 183 VYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNK 262 (287)
Q Consensus 183 ~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~ 262 (287)
..+..++++.+++++..++++||++|||+|+|+|+||+||+|.++... ..|.+.+|++++.||.+|+++|++|+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~----~~~~~~~n~~~~~~N~~L~~~l~~l~~~ 204 (281)
T cd01847 129 QAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP----AAAAALASALSQTYNQTLQSGLNQLGAN 204 (281)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc----chhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 234678999999999999999999999999999999999999987653 3699999999999999999999999764
Q ss_pred CCCcEEEEEecchHHHHHhhCCCCC
Q 040658 263 LSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 263 ~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
+|+++|+|.++++|++||++|
T Consensus 205 ----~i~~~D~~~~~~~i~~nP~~y 225 (281)
T cd01847 205 ----NIIYVDTATLLKEVVANPAAY 225 (281)
T ss_pred ----eEEEEEHHHHHHHHHhChHhc
Confidence 899999999999999999987
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=2.5e-43 Score=313.37 Aligned_cols=217 Identities=23% Similarity=0.344 Sum_probs=177.8
Q ss_pred EEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCCce
Q 040658 29 AMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIGAN 108 (287)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G~N 108 (287)
++|+|||||||+||+.++... ..+|.+..| |+||||||++|+|+||+.+|++ . ..+|+|
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~---~~~~~~~~~----~~grfsnG~~w~d~la~~lg~~-~-------------~~~~~N 59 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG---SNPPPSPPY----FGGRFSNGPVWVEYLAATLGLS-G-------------LKQGYN 59 (270)
T ss_pred CeEEeeCccccCCcchhhcCC---CCCCCCCCC----CCCccCCchhHHHHHHHHhCCC-c-------------cCCcce
Confidence 589999999999998654321 123333333 7899999999999999999986 2 246899
Q ss_pred eeecccccccCCC--ccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCCh
Q 040658 109 FASGASGYYETTA--KLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTP 186 (287)
Q Consensus 109 fA~gGA~~~~~~~--~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~ 186 (287)
||+|||++..... ......++..||++|++..+. +..+++|++||+|+||+...+.. ....
T Consensus 60 ~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~~~~------~~~~ 122 (270)
T cd01846 60 YAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNALDL------PQNP 122 (270)
T ss_pred eEecccccCCcccCCCCCCCCCHHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhhccc------cccc
Confidence 9999999986543 123357999999999876431 34578999999999999875422 1134
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCc
Q 040658 187 DQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGL 266 (287)
Q Consensus 187 ~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~ 266 (287)
..+++.+++++.+.|++|+++|+|+|+|+++||+||+|..+..... ..+.++.+++.||++|++++++|++++|++
T Consensus 123 ~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~----~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 198 (270)
T cd01846 123 DTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA----VAARATALTAAYNAKLAEKLAELKAQHPGV 198 (270)
T ss_pred cccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4678899999999999999999999999999999999999875431 126899999999999999999999999999
Q ss_pred EEEEEecchHHHHHhhCCCCC
Q 040658 267 NLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 267 ~i~~~D~~~~~~~ii~nP~~Y 287 (287)
+|+++|+|.++.++++||++|
T Consensus 199 ~i~~~D~~~~~~~~~~~p~~y 219 (270)
T cd01846 199 NILLFDTNALFNDILDNPAAY 219 (270)
T ss_pred eEEEEEhHHHHHHHHhCHHhc
Confidence 999999999999999999887
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.93 E-value=3.8e-26 Score=204.41 Aligned_cols=240 Identities=22% Similarity=0.230 Sum_probs=164.3
Q ss_pred CCCcCEEEEcCCccccCCCCCccchhcccCCC-CCccCCCCCCCccccc--CCchhHHHHHHhhCCCCCCCC----CCCc
Q 040658 24 QPLVPAMFIFGDSVVDAGNNNYIYTIVKANFR-PYGRDFVHHKPTGRFC--NGKLAADFTAENIGFTSYPPA----YLSE 96 (287)
Q Consensus 24 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~-PyG~~~~~~~~~GRfS--nG~~~~d~la~~lgl~~~~pp----~~~~ 96 (287)
.++|+.++||||||||+|+...... ....+ -||. ++..+++ +|..|+++.++.+|.-...+. ..++
T Consensus 26 ~~~~~~l~vfGDSlSDsg~~~~~a~--~~~~~~~~~~-----~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~~~ 98 (370)
T COG3240 26 LAPFQRLVVFGDSLSDSGNYYRPAG--HHGDPGSYGT-----IPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAADP 98 (370)
T ss_pred ccccceEEEeccchhhcccccCccc--ccCCcccccc-----ccCCcccCCCceeeeccchhhhccccccccccccccCc
Confidence 3589999999999999999753311 11111 1221 1333444 467888888888881101011 1122
Q ss_pred cccCCcccCCceeeecccccccCC--C-ccccCCCHHHHHHHHHHHHHHHHHhhcc-cchhhcccCceEEEEcccchhHH
Q 040658 97 EAKGKNLLIGANFASGASGYYETT--A-KLYHAIPLSQQLEHFKDYQRKLEGIAGK-TNASSIISGGLCLVSSGSSDFIQ 172 (287)
Q Consensus 97 ~~~~~~~~~G~NfA~gGA~~~~~~--~-~~~~~~~l~~Qv~~f~~~~~~~~~~~G~-~~~~~~~~~sL~~i~iG~ND~~~ 172 (287)
+...---..|.|||+|||++...+ . ......++..|+.+|+....... ++. ..........|+.+|.|+|||+.
T Consensus 99 ~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~--v~~~~~~~~l~p~~l~~~~ggand~~~ 176 (370)
T COG3240 99 NGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGGF--VWPNYPAQGLDPSALYFLWGGANDYLA 176 (370)
T ss_pred ccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCcc--ccccccccccCHHHHHHHhhcchhhhc
Confidence 111122368999999999986554 1 22457789999999988654200 000 11123456789999999999986
Q ss_pred hhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHH
Q 040658 173 NYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKL 252 (287)
Q Consensus 173 ~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L 252 (287)
.-..+. ...+.+......++...|++|.+.|||+++|+++|+++.+|...... .-.+.+.+++..||.-|
T Consensus 177 ~~~~~a-----~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~-----~~~~~a~~~t~~~Na~L 246 (370)
T COG3240 177 LPMLKA-----AAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG-----TEAIQASQATIAFNASL 246 (370)
T ss_pred ccccch-----hhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc-----chHHHHHHHHHHHHHHH
Confidence 321111 11122333446679999999999999999999999999999987532 23337889999999999
Q ss_pred HHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 253 NATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 253 ~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
++.|++++ .+|+.+|++.++++||.||++|
T Consensus 247 ~~~L~~~g-----~nIi~iD~~~llk~im~nPa~f 276 (370)
T COG3240 247 TSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEF 276 (370)
T ss_pred HHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhc
Confidence 99999986 7999999999999999999987
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.85 E-value=7.4e-21 Score=163.74 Aligned_cols=201 Identities=25% Similarity=0.406 Sum_probs=139.9
Q ss_pred EEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCCcee
Q 040658 30 MFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIGANF 109 (287)
Q Consensus 30 l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G~Nf 109 (287)
|++||||+||. +|+++|.+|.+.++..+.-. . .. .....-..+.|+
T Consensus 1 i~~fGDS~td~---------------------------~~~~~~~~~~~~~~~~l~~~-~-----~~-~~~~~~~~~~n~ 46 (234)
T PF00657_consen 1 IVVFGDSLTDG---------------------------GGDSNGGGWPEGLANNLSSC-L-----GA-NQRNSGVDVSNY 46 (234)
T ss_dssp EEEEESHHHHT---------------------------TTSSTTCTHHHHHHHHCHHC-C-----HH-HHHCTTEEEEEE
T ss_pred CEEEeehhccc---------------------------CCCCCCcchhhhHHHHHhhc-c-----cc-ccCCCCCCeecc
Confidence 68999999998 35678899999999887211 0 00 000112446899
Q ss_pred eecccccccCCCcc-ccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCChhh
Q 040658 110 ASGASGYYETTAKL-YHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQ 188 (287)
Q Consensus 110 A~gGA~~~~~~~~~-~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 188 (287)
|.+|+++....... .....+..|+...... ....+.+|++||+|+||++.. . .......
T Consensus 47 a~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~lv~i~~G~ND~~~~--~-----~~~~~~~ 106 (234)
T PF00657_consen 47 AISGATSDGDLYNLWAQVQNISQQISRLLDS-------------KSFYDPDLVVIWIGTNDYFNN--R-----DSSDNNT 106 (234)
T ss_dssp E-TT--CC-HGGCCCCTCHHHHHHHHHHHHH-------------HHHHTTSEEEEE-SHHHHSSC--C-----SCSTTHH
T ss_pred ccCCCccccccchhhHHHHHHHHHhhccccc-------------cccCCcceEEEecccCcchhh--c-----ccchhhh
Confidence 99999975322100 0011122233222111 123467899999999998741 1 1224456
Q ss_pred HHHHHHHHHHHHHHHHHHcCCc-----EEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhC
Q 040658 189 FSDILIESFSAFVQKLYGLGVR-----KIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKL 263 (287)
Q Consensus 189 ~v~~~v~~i~~~i~~L~~~GAR-----~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~ 263 (287)
.++.+++++.+.|++|++.|+| +++++++||++|.|....... ....|.+.+++.++.||++|++.++++++.+
T Consensus 107 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~ 185 (234)
T PF00657_consen 107 SVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK-DSASCIERLNAIVAAFNSALREVAAQLRKDY 185 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred hHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc-cccccchhhHHHHHHHHHHHHHHhhhccccc
Confidence 7889999999999999999999 999999999999998665432 2458999999999999999999999998877
Q ss_pred C-CcEEEEEecchHHHHH--hhCCC
Q 040658 264 S-GLNLVVLDIYQPLYDL--VTKPS 285 (287)
Q Consensus 264 p-g~~i~~~D~~~~~~~i--i~nP~ 285 (287)
+ +.++.++|+++.+.++ ..+|.
T Consensus 186 ~~~~~v~~~D~~~~~~~~~~~~~~~ 210 (234)
T PF00657_consen 186 PKGANVPYFDIYSIFSDMYGIQNPE 210 (234)
T ss_dssp HHHCTEEEEEHHHHHHHHHHHHHGG
T ss_pred ccCCceEEEEHHHHHHHhhhccCcc
Confidence 6 8999999999999998 66653
No 8
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.57 E-value=1.2e-06 Score=74.66 Aligned_cols=174 Identities=14% Similarity=0.102 Sum_probs=97.7
Q ss_pred EEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCCce
Q 040658 29 AMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIGAN 108 (287)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G~N 108 (287)
.|++||||++. |-. +- -.+|++.+..|+..|++.|+-. . +. ..-+|
T Consensus 1 ~I~~~GDSiT~-G~~------------~~--------~~~~~~~~~~w~~~L~~~l~~~-~-~~-----------~~viN 46 (208)
T cd01839 1 TILCFGDSNTW-GII------------PD--------TGGRYPFEDRWPGVLEKALGAN-G-EN-----------VRVIE 46 (208)
T ss_pred CEEEEecCccc-CCC------------CC--------CCCcCCcCCCCHHHHHHHHccC-C-CC-----------eEEEe
Confidence 47899999973 221 00 1135566778999999998644 2 11 12379
Q ss_pred eeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCChhh
Q 040658 109 FASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQ 188 (287)
Q Consensus 109 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 188 (287)
.+.+|.++..... .......++.+.+... ....-++++|++|.||+...+. .++
T Consensus 47 ~Gv~G~tt~~~~~----~~~~~~~l~~l~~~l~------------~~~~pd~vii~lGtND~~~~~~--------~~~-- 100 (208)
T cd01839 47 DGLPGRTTVLDDP----FFPGRNGLTYLPQALE------------SHSPLDLVIIMLGTNDLKSYFN--------LSA-- 100 (208)
T ss_pred cCcCCcceeccCc----cccCcchHHHHHHHHH------------hCCCCCEEEEeccccccccccC--------CCH--
Confidence 9999988642210 0011112222322211 1124478999999999864210 122
Q ss_pred HHHHHHHHHHHHHHHHHHc------CCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q 040658 189 FSDILIESFSAFVQKLYGL------GVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNK 262 (287)
Q Consensus 189 ~v~~~v~~i~~~i~~L~~~------GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~ 262 (287)
+...+++.+.++++.+. +..+++++..||+-..+.. ...+....+...+.||+.+++..++.
T Consensus 101 --~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~--- 168 (208)
T cd01839 101 --AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGS-------LAGKFAGAEEKSKGLADAYRALAEEL--- 168 (208)
T ss_pred --HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccc-------hhhhhccHHHHHHHHHHHHHHHHHHh---
Confidence 23444555555555554 4678888888887222111 01234445677788888777765543
Q ss_pred CCCcEEEEEecchHHH
Q 040658 263 LSGLNLVVLDIYQPLY 278 (287)
Q Consensus 263 ~pg~~i~~~D~~~~~~ 278 (287)
++.++|++..+.
T Consensus 169 ----~~~~iD~~~~~~ 180 (208)
T cd01839 169 ----GCHFFDAGSVGS 180 (208)
T ss_pred ----CCCEEcHHHHhc
Confidence 366789877653
No 9
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.49 E-value=2.2e-06 Score=71.39 Aligned_cols=154 Identities=19% Similarity=0.227 Sum_probs=91.0
Q ss_pred EEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCCce
Q 040658 29 AMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIGAN 108 (287)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G~N 108 (287)
+|++||||+++--.. ++....+..|++.+++.+.-+ . +. ..-.|
T Consensus 1 ~i~~~GDSit~G~~~-----------------------~~~~~~~~~~~~~l~~~l~~~-~-~~-----------~~~~N 44 (185)
T cd01832 1 RYVALGDSITEGVGD-----------------------PVPDGGYRGWADRLAAALAAA-D-PG-----------IEYAN 44 (185)
T ss_pred CeeEecchhhcccCC-----------------------CCCCCccccHHHHHHHHhccc-C-CC-----------ceEee
Confidence 478999999873221 011224578999999987532 0 10 12379
Q ss_pred eeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCChhh
Q 040658 109 FASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQ 188 (287)
Q Consensus 109 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 188 (287)
.+.+|++... .+..|+.. .. . ..-.+++|.+|.||... . ..++
T Consensus 45 ~g~~G~~~~~---------~~~~~~~~---~~-------------~-~~~d~vii~~G~ND~~~----~-----~~~~-- 87 (185)
T cd01832 45 LAVRGRRTAQ---------ILAEQLPA---AL-------------A-LRPDLVTLLAGGNDILR----P-----GTDP-- 87 (185)
T ss_pred ccCCcchHHH---------HHHHHHHH---HH-------------h-cCCCEEEEecccccccc----C-----CCCH--
Confidence 9999997532 01122211 10 0 13368889999999853 0 1122
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCC-ccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcE
Q 040658 189 FSDILIESFSAFVQKLYGLGVRKIGVSTLPPL-GCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLN 267 (287)
Q Consensus 189 ~v~~~v~~i~~~i~~L~~~GAR~~vv~nlppl-Gc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~ 267 (287)
.+..+++...|+++...+++ ++++++||. +..|. ....+.....+|+.|++..++. +
T Consensus 88 --~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~------------~~~~~~~~~~~n~~l~~~a~~~-------~ 145 (185)
T cd01832 88 --DTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPF------------RRRVRARLAAYNAVIRAVAARY-------G 145 (185)
T ss_pred --HHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchh------------HHHHHHHHHHHHHHHHHHHHHc-------C
Confidence 34555666677777666774 777888887 32221 1123445777888777765532 4
Q ss_pred EEEEecchHH
Q 040658 268 LVVLDIYQPL 277 (287)
Q Consensus 268 i~~~D~~~~~ 277 (287)
+.++|++..+
T Consensus 146 v~~vd~~~~~ 155 (185)
T cd01832 146 AVHVDLWEHP 155 (185)
T ss_pred CEEEecccCc
Confidence 7778888764
No 10
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.43 E-value=4.8e-06 Score=69.79 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=60.9
Q ss_pred cCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCCCCccccccccccCCCCc
Q 040658 157 SGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYG-LGVRKIGVSTLPPLGCLPATITVFGSDSN 235 (287)
Q Consensus 157 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~-~GAR~~vv~nlpplGc~P~~~~~~~~~~~ 235 (287)
.-.+++|.+|+||+... .+. ++...++.+.++++.+ ....+|++.++||.++.|....
T Consensus 67 ~pd~Vii~~G~ND~~~~----------~~~----~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~------- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHL----------TSI----ARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ------- 125 (191)
T ss_pred CCCEEEEEecccCcCCC----------CCH----HHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-------
Confidence 34789999999998531 122 3456666667777765 3566899999999887764321
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHH
Q 040658 236 ECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPL 277 (287)
Q Consensus 236 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~ 277 (287)
.+...+++..+.+|+.+++..++ ++ .+.++|++..+
T Consensus 126 ~~~~~~~~~~~~~n~~~~~~a~~----~~--~~~~id~~~~~ 161 (191)
T cd01836 126 PLRWLLGRRARLLNRALERLASE----AP--RVTLLPATGPL 161 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CC--CeEEEecCCcc
Confidence 12334455666777766665543 33 46677988876
No 11
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.37 E-value=8.4e-06 Score=71.74 Aligned_cols=196 Identities=12% Similarity=0.018 Sum_probs=103.4
Q ss_pred EEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCCce
Q 040658 29 AMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIGAN 108 (287)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G~N 108 (287)
+++++|||++---.. +++... +.. ...|. ...|++++++.|+.. + ..-.|
T Consensus 2 ~~v~iGDS~~~G~g~-----------~~~~~~-~~~-~c~rs--~~~y~~~la~~l~~~----~-----------~~~~n 51 (259)
T cd01823 2 RYVALGDSYAAGPGA-----------GPLDDG-PDD-GCRRS--SNSYPTLLARALGDE----T-----------LSFTD 51 (259)
T ss_pred CEEEecchhhcCCCC-----------CcccCC-CCC-CCccC--CccHHHHHHHHcCCC----C-----------ceeee
Confidence 578999998743332 111100 111 23344 367999999998743 0 12379
Q ss_pred eeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhc-----CCcc---
Q 040658 109 FASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYI-----NPLL--- 180 (287)
Q Consensus 109 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~-----~~~~--- 180 (287)
+|.+|+++.+-... .......|.+ .. ...-.+.+|.||+||+...... ....
T Consensus 52 ~a~sGa~~~~~~~~--~~~~~~~~~~--------------~l----~~~~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~ 111 (259)
T cd01823 52 VACSGATTTDGIEP--QQGGIAPQAG--------------AL----DPDTDLVTITIGGNDLGFADVVKACILTGGGSSL 111 (259)
T ss_pred eeecCccccccccc--ccCCCchhhc--------------cc----CCCCCEEEEEECccccchHHHHHHHhhccCCCCc
Confidence 99999998643211 0011111111 00 1124789999999998542211 0000
Q ss_pred -----cccCChhhHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCccc----cccc-cccCCCCcchhhhhHHHHHHHH
Q 040658 181 -----YKVYTPDQFSDILIESFSAFVQKLYGL-GVRKIGVSTLPPLGCL----PATI-TVFGSDSNECVDKINGDAVSFN 249 (287)
Q Consensus 181 -----~~~~~~~~~v~~~v~~i~~~i~~L~~~-GAR~~vv~nlpplGc~----P~~~-~~~~~~~~~c~~~~n~~~~~~N 249 (287)
..........+....++...|++|.+. .--+|++++.|++--. |... .....-.....+.+++....+|
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln 191 (259)
T cd01823 112 AQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFPPDGGDCDKSCSPGTPLTPADRPELNQLVDKLN 191 (259)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccccCCCCCcccccccCCCCCHHHHHHHHHHHHHHH
Confidence 000011233445566677777777654 3346889998774210 0000 0000000123456677777788
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEecchHHH
Q 040658 250 NKLNATSQSLVNKLSGLNLVVLDIYQPLY 278 (287)
Q Consensus 250 ~~L~~~l~~l~~~~pg~~i~~~D~~~~~~ 278 (287)
..+++..++. ...++.++|++..+.
T Consensus 192 ~~i~~~a~~~----~~~~v~fvD~~~~f~ 216 (259)
T cd01823 192 ALIRRAAADA----GDYKVRFVDTDAPFA 216 (259)
T ss_pred HHHHHHHHHh----CCceEEEEECCCCcC
Confidence 7777665543 336788999998776
No 12
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.24 E-value=3.2e-05 Score=64.28 Aligned_cols=92 Identities=20% Similarity=0.319 Sum_probs=57.3
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcch
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNEC 237 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c 237 (287)
-.+++|.+|.||.... .+. .+..+++++.|+.+.+.|++ ++++..+|..-.+.. .+
T Consensus 60 ~d~v~i~~G~ND~~~~----------~~~----~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~---------~~ 115 (183)
T cd04501 60 PAVVIIMGGTNDIIVN----------TSL----EMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWK---------PQ 115 (183)
T ss_pred CCEEEEEeccCccccC----------CCH----HHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccc---------hh
Confidence 3688899999998531 022 34556667777777777875 555566665433221 11
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHHH
Q 040658 238 VDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYDL 280 (287)
Q Consensus 238 ~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~i 280 (287)
....+.....||+.+++..++ ..+.++|.++.+.+.
T Consensus 116 ~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~ 151 (183)
T cd04501 116 WLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDE 151 (183)
T ss_pred hcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcc
Confidence 123345667788877766543 147889999987764
No 13
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.12 E-value=6.3e-05 Score=63.91 Aligned_cols=56 Identities=14% Similarity=0.216 Sum_probs=36.4
Q ss_pred ceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCc
Q 040658 159 GLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLG 221 (287)
Q Consensus 159 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplG 221 (287)
.+.+|.+|.||......... .....++....++..-++++.+.|+ ++++.+++|..
T Consensus 76 ~~vii~~G~ND~~~~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~ 131 (204)
T cd01830 76 RTVIILEGVNDIGASGTDFA------AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFE 131 (204)
T ss_pred CEEEEecccccccccccccc------cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCC
Confidence 57888999999864221100 1111235667778888888888887 57778888754
No 14
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.09 E-value=8.5e-05 Score=60.29 Aligned_cols=93 Identities=18% Similarity=0.355 Sum_probs=60.6
Q ss_pred ceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchh
Q 040658 159 GLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECV 238 (287)
Q Consensus 159 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~ 238 (287)
.+++|.+|+||.... . ......+....++...|+++...+ +++++.+||..-.+.. .+.
T Consensus 63 d~vvi~~G~ND~~~~---~-------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~---------~~~ 121 (179)
T PF13472_consen 63 DLVVISFGTNDVLNG---D-------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRD---------PKQ 121 (179)
T ss_dssp SEEEEE--HHHHCTC---T-------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTT---------THT
T ss_pred CEEEEEccccccccc---c-------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccc---------ccc
Confidence 588999999998651 0 223445677888888888888888 8888888875543322 123
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 239 DKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 239 ~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
.........+|+.+++..+ ++ .+.++|++..+.+
T Consensus 122 ~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~~ 155 (179)
T PF13472_consen 122 DYLNRRIDRYNQAIRELAK----KY---GVPFIDLFDAFDD 155 (179)
T ss_dssp TCHHHHHHHHHHHHHHHHH----HC---TEEEEEHHHHHBT
T ss_pred hhhhhhHHHHHHHHHHHHH----Hc---CCEEEECHHHHcc
Confidence 3445566777877766543 32 5778999988654
No 15
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.06 E-value=0.00017 Score=59.78 Aligned_cols=147 Identities=14% Similarity=0.112 Sum_probs=85.4
Q ss_pred EEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCCce
Q 040658 29 AMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIGAN 108 (287)
Q Consensus 29 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G~N 108 (287)
+|++||||++.-.... +-+..|+..+++.+++. -+|
T Consensus 1 ~iv~~GDSit~G~g~~--------------------------~~~~~~~~~~~~~~~~~------------------v~N 36 (177)
T cd01844 1 PWVFYGTSISQGACAS--------------------------RPGMAWTAILARRLGLE------------------VIN 36 (177)
T ss_pred CEEEEeCchhcCcCCC--------------------------CCCCcHHHHHHHHhCCC------------------eEE
Confidence 4789999987654320 11347888899887765 179
Q ss_pred eeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCChhh
Q 040658 109 FASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQ 188 (287)
Q Consensus 109 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 188 (287)
.+++|++... ..+ .+... ...-.+++|.+|+||... .
T Consensus 37 ~g~~G~~~~~------------~~~---~~~~~-------------~~~pd~vii~~G~ND~~~------------~--- 73 (177)
T cd01844 37 LGFSGNARLE------------PEV---AELLR-------------DVPADLYIIDCGPNIVGA------------E--- 73 (177)
T ss_pred eeecccccch------------HHH---HHHHH-------------hcCCCEEEEEeccCCCcc------------H---
Confidence 9999986421 011 11111 113368899999999632 0
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcE
Q 040658 189 FSDILIESFSAFVQKLYGLGV-RKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLN 267 (287)
Q Consensus 189 ~v~~~v~~i~~~i~~L~~~GA-R~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~ 267 (287)
.+..+++...+++|.+..- .+|+++..+|. |...... ......++....+| +.++++.++ ..-+
T Consensus 74 --~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~~-~~~~ 138 (177)
T cd01844 74 --AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELTP-----GRGKLTLAVRRALR----EAFEKLRAD-GVPN 138 (177)
T ss_pred --HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccCc-----chhHHHHHHHHHHH----HHHHHHHhc-CCCC
Confidence 1566777788888877654 46777777664 2211111 12223334444444 444444433 2347
Q ss_pred EEEEecchHH
Q 040658 268 LVVLDIYQPL 277 (287)
Q Consensus 268 i~~~D~~~~~ 277 (287)
+.++|.+.++
T Consensus 139 v~~id~~~~~ 148 (177)
T cd01844 139 LYYLDGEELL 148 (177)
T ss_pred EEEecchhhc
Confidence 8889988665
No 16
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.06 E-value=0.00012 Score=61.08 Aligned_cols=91 Identities=16% Similarity=0.144 Sum_probs=49.7
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCccccccccccCCCCcc
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGV-RKIGVSTLPPLGCLPATITVFGSDSNE 236 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~~vv~nlpplGc~P~~~~~~~~~~~~ 236 (287)
-.+++|.+|.||..... . ... +....++...|+++.+.+. .++++.+.+|...... .
T Consensus 68 pd~Vii~~G~ND~~~~~---~-----~~~----~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~----------~ 125 (188)
T cd01827 68 PNIVIIKLGTNDAKPQN---W-----KYK----DDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG----------G 125 (188)
T ss_pred CCEEEEEcccCCCCCCC---C-----ccH----HHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC----------C
Confidence 37899999999975311 0 012 2334566666777666553 4777777766432110 1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHH
Q 040658 237 CVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLY 278 (287)
Q Consensus 237 c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~ 278 (287)
+ ...+...+.+|+.+++. .+++ .+.++|.|+.+.
T Consensus 126 ~-~~~~~~~~~~~~~~~~~----a~~~---~~~~vD~~~~~~ 159 (188)
T cd01827 126 F-INDNIIKKEIQPMIDKI----AKKL---NLKLIDLHTPLK 159 (188)
T ss_pred c-cchHHHHHHHHHHHHHH----HHHc---CCcEEEcccccc
Confidence 1 11123344566555544 3332 356679887653
No 17
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.03 E-value=6e-05 Score=63.04 Aligned_cols=104 Identities=14% Similarity=0.124 Sum_probs=57.8
Q ss_pred cCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHH--cCCcEEEEeCCCCCccccccccccCCCC
Q 040658 157 SGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYG--LGVRKIGVSTLPPLGCLPATITVFGSDS 234 (287)
Q Consensus 157 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~--~GAR~~vv~nlpplGc~P~~~~~~~~~~ 234 (287)
.-.+++|++|+||....... ...+. +...++++..|+++-+ .|+ ++++++.||.+-......... .
T Consensus 63 ~pd~vii~~G~ND~~~~~~~-----~~~~~----~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~--~ 130 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQP-----QHVPL----DEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED--G 130 (199)
T ss_pred CceEEEEEecCccccCCCCC-----CcccH----HHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc--c
Confidence 45789999999998642110 00122 3344555555666655 454 577778877553221100000 0
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 235 NECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 235 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
.......++..+.||+.+++..++. .+.++|++..+.+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~ 168 (199)
T cd01838 131 GSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQE 168 (199)
T ss_pred cCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHh
Confidence 0123445667788887776654432 3677899988764
No 18
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.02 E-value=0.00013 Score=61.46 Aligned_cols=96 Identities=11% Similarity=0.060 Sum_probs=56.1
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcch
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNEC 237 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c 237 (287)
-++++|.+|.||....... ...+ ++....++.+.|+++-+.|++ +++++.+|... + . .+
T Consensus 66 pdlVii~~G~ND~~~~~~~-----~~~~----~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~---~----~----~~ 124 (198)
T cd01821 66 GDYVLIQFGHNDQKPKDPE-----YTEP----YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT---F----D----EG 124 (198)
T ss_pred CCEEEEECCCCCCCCCCCC-----CCCc----HHHHHHHHHHHHHHHHHCCCe-EEEECCccccc---c----C----CC
Confidence 4889999999998542100 0112 345566777777888888886 44455444211 1 0 01
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHHHhh
Q 040658 238 VDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYDLVT 282 (287)
Q Consensus 238 ~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~ 282 (287)
. ..+.....||+.+++..++. .+.++|++..+.+..+
T Consensus 125 ~-~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~ 161 (198)
T cd01821 125 G-KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYE 161 (198)
T ss_pred C-cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHH
Confidence 0 22334466777776655543 3667999998876543
No 19
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.01 E-value=0.00011 Score=62.19 Aligned_cols=107 Identities=15% Similarity=0.160 Sum_probs=60.6
Q ss_pred cCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCccccccccccCCCCc
Q 040658 157 SGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGV-RKIGVSTLPPLGCLPATITVFGSDSN 235 (287)
Q Consensus 157 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~~vv~nlpplGc~P~~~~~~~~~~~ 235 (287)
.-.+++|.+|+||+..................-......++.+.|+++.+.+. .+++++++++ |.....
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~----p~~~~~------ 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYN----PFYVYF------ 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCC----cccccc------
Confidence 34788999999999764321100000001112234566777777777777654 3567776531 211111
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 236 ECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 236 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
.-...+++.++.||+.+++..++. -++.++|+++.+..
T Consensus 138 ~~~~~~~~~~~~~n~~~~~~a~~~------~~v~~vd~~~~~~~ 175 (204)
T cd04506 138 PNITEINDIVNDWNEASQKLASQY------KNAYFVPIFDLFSD 175 (204)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhC------CCeEEEehHHhhcC
Confidence 012345778888998777765432 24788899987764
No 20
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=97.83 E-value=0.00015 Score=61.04 Aligned_cols=106 Identities=11% Similarity=0.103 Sum_probs=65.0
Q ss_pred cCEEEEcCCccccCCCCCccchhcccCCCCCccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCcccCC
Q 040658 27 VPAMFIFGDSVVDAGNNNYIYTIVKANFRPYGRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIG 106 (287)
Q Consensus 27 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G 106 (287)
-.+|++||||++..... +.+..|+..+++.+... . .-
T Consensus 10 ~~~iv~~GDSit~G~~~---------------------------~~~~~w~~~l~~~l~~~-~---------------~v 46 (191)
T PRK10528 10 ADTLLILGDSLSAGYRM---------------------------PASAAWPALLNDKWQSK-T---------------SV 46 (191)
T ss_pred CCEEEEEeCchhhcCCC---------------------------CccCchHHHHHHHHhhC-C---------------CE
Confidence 47999999998653221 12346888888887543 1 02
Q ss_pred ceeeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCCh
Q 040658 107 ANFASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTP 186 (287)
Q Consensus 107 ~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~ 186 (287)
+|-+.+|.++. .+..++ .+... . .+-.+++|.+|.||.... .+.
T Consensus 47 ~N~Gi~G~tt~----------~~~~rl---~~~l~------------~-~~pd~Vii~~GtND~~~~----------~~~ 90 (191)
T PRK10528 47 VNASISGDTSQ----------QGLARL---PALLK------------Q-HQPRWVLVELGGNDGLRG----------FPP 90 (191)
T ss_pred EecCcCcccHH----------HHHHHH---HHHHH------------h-cCCCEEEEEeccCcCccC----------CCH
Confidence 68888887652 111222 22111 1 123788999999997421 122
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCcEEEEe
Q 040658 187 DQFSDILIESFSAFVQKLYGLGVRKIGVS 215 (287)
Q Consensus 187 ~~~v~~~v~~i~~~i~~L~~~GAR~~vv~ 215 (287)
++..++++.-++++.+.|++.+++.
T Consensus 91 ----~~~~~~l~~li~~~~~~~~~~ill~ 115 (191)
T PRK10528 91 ----QQTEQTLRQIIQDVKAANAQPLLMQ 115 (191)
T ss_pred ----HHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4556777777888888898877663
No 21
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.79 E-value=0.00017 Score=59.90 Aligned_cols=91 Identities=11% Similarity=0.126 Sum_probs=53.0
Q ss_pred ceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCccccccccccCCCCcch
Q 040658 159 GLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGL-GVRKIGVSTLPPLGCLPATITVFGSDSNEC 237 (287)
Q Consensus 159 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~-GAR~~vv~nlpplGc~P~~~~~~~~~~~~c 237 (287)
.+++|.+|+||.... ..+ .+...+++...|+++.+. ...++++++.||....+.. +
T Consensus 58 d~Vii~~G~ND~~~~---------~~~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~----------~ 114 (189)
T cd01825 58 DLVILSYGTNEAFNK---------QLN----ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA----------G 114 (189)
T ss_pred CEEEEECCCcccccC---------CCC----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC----------C
Confidence 688899999996431 012 234566777777777764 5567888877764332210 1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 238 VDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 238 ~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
....+...+.+|..+++.. +++ + +.++|+++.+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~a----~~~-~--v~~vd~~~~~~~ 149 (189)
T cd01825 115 RWRTPPGLDAVIAAQRRVA----KEE-G--IAFWDLYAAMGG 149 (189)
T ss_pred CcccCCcHHHHHHHHHHHH----HHc-C--CeEEeHHHHhCC
Confidence 1112233456666555543 332 2 778899887643
No 22
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.66 E-value=0.001 Score=54.54 Aligned_cols=45 Identities=13% Similarity=0.259 Sum_probs=29.9
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCC
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTL 217 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nl 217 (287)
-.+++|.+|+||.... .+. +....++...++++.+.|++ ++++++
T Consensus 65 pd~v~i~~G~ND~~~~----------~~~----~~~~~~l~~li~~~~~~~~~-vil~~~ 109 (177)
T cd01822 65 PDLVILELGGNDGLRG----------IPP----DQTRANLRQMIETAQARGAP-VLLVGM 109 (177)
T ss_pred CCEEEEeccCcccccC----------CCH----HHHHHHHHHHHHHHHHCCCe-EEEEec
Confidence 3688999999997431 122 34566677777777777776 555554
No 23
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=97.62 E-value=0.0052 Score=55.28 Aligned_cols=214 Identities=14% Similarity=0.088 Sum_probs=108.2
Q ss_pred CcCEEEEcCCccccCCCCCccchhcccCCCCC-ccCCCCCCCcccccCCchhHHHHHHhhCCCCCCCCCCCccccCCccc
Q 040658 26 LVPAMFIFGDSVVDAGNNNYIYTIVKANFRPY-GRDFVHHKPTGRFCNGKLAADFTAENIGFTSYPPAYLSEEAKGKNLL 104 (287)
Q Consensus 26 ~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Py-G~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~ 104 (287)
.++-|-.+|||++ .|+........-. .-.| |.+|..+ -.+.+.+=.+.+.+|-+. + | -+.-|.........-.
T Consensus 9 DI~viaA~GDSlt-ag~ga~~~~~~~~-~~e~rG~s~~~G-g~~~~~~~~Tlpnil~~f-n-p-~l~G~s~~~~~~~~~~ 82 (288)
T cd01824 9 DIKVIAALGDSLT-AGNGAGSANNLDL-LTEYRGLSWSIG-GDSTLRGLTTLPNILREF-N-P-SLYGYSVGTGDETLPD 82 (288)
T ss_pred cCeEEeecccccc-ccCCCCCCCcccc-ccccCCceEecC-CcccccccccHHHHHHHh-C-C-CcccccCCCCCCCCcc
Confidence 6888999999998 3443210000000 0011 3334221 112223335566665543 2 1 1111111100011123
Q ss_pred CCceeeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccchhhcccC-ceEEEEcccchhHHhhhcCCccccc
Q 040658 105 IGANFASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNASSIISG-GLCLVSSGSSDFIQNYYINPLLYKV 183 (287)
Q Consensus 105 ~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~-sL~~i~iG~ND~~~~~~~~~~~~~~ 183 (287)
...|.|+.|+++. .|..|++...+..++ . .....-.+ .|.+|+||+||... +.... ..
T Consensus 83 ~~~N~av~Ga~s~----------dL~~qa~~lv~r~~~---~----~~i~~~~dwklVtI~IG~ND~c~-~~~~~---~~ 141 (288)
T cd01824 83 SGFNVAEPGAKSE----------DLPQQARLLVRRMKK---D----PRVDFKNDWKLITIFIGGNDLCS-LCEDA---NP 141 (288)
T ss_pred cceeecccCcchh----------hHHHHHHHHHHHHhh---c----cccccccCCcEEEEEecchhHhh-hcccc---cC
Confidence 5689999999864 466788765443221 0 00111122 47889999999976 21111 01
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHcCCc-EEEEeCCCCCccccccccccCC----CCcch--h--------hhhHHHHHHH
Q 040658 184 YTPDQFSDILIESFSAFVQKLYGLGVR-KIGVSTLPPLGCLPATITVFGS----DSNEC--V--------DKINGDAVSF 248 (287)
Q Consensus 184 ~~~~~~v~~~v~~i~~~i~~L~~~GAR-~~vv~nlpplGc~P~~~~~~~~----~~~~c--~--------~~~n~~~~~~ 248 (287)
.......+++.+.++.|.+..-| .++++++|++..++........ ....| . +.+.++.+.|
T Consensus 142 ----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~~y 217 (288)
T cd01824 142 ----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFYKEY 217 (288)
T ss_pred ----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHHHHH
Confidence 22456677888888888887765 4677777776544433210000 01123 2 3667788889
Q ss_pred HHHHHHHHHHHHhhCCCcEEEE
Q 040658 249 NNKLNATSQSLVNKLSGLNLVV 270 (287)
Q Consensus 249 N~~L~~~l~~l~~~~pg~~i~~ 270 (287)
++.+++..++-+-...+..+++
T Consensus 218 ~~~~~eia~~~~~~~~~f~vv~ 239 (288)
T cd01824 218 QNEVEEIVESGEFDREDFAVVV 239 (288)
T ss_pred HHHHHHHHhcccccccCccEEe
Confidence 9888877765332223445555
No 24
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.55 E-value=0.0027 Score=53.06 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=49.4
Q ss_pred cCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcc
Q 040658 157 SGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNE 236 (287)
Q Consensus 157 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~ 236 (287)
+-.+.+|.+|.||....... ....+.++| .+.+...++++ +.++ ++++++++|..-..
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~----~~~~~~~~~----~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~------------ 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRK----RPQLSARAF----LFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK------------ 126 (193)
T ss_pred CCCEEEEEecCcccccccCc----ccccCHHHH----HHHHHHHHHHH-hcCC-cEEEEeCCCccccc------------
Confidence 44789999999998652110 001122222 22232223322 2344 57777777653211
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 237 CVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 237 c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
....+.....+|+.+++..++. .+.++|++..+.+
T Consensus 127 -~~~~~~~~~~~n~~~~~~a~~~-------~~~~vd~~~~~~~ 161 (193)
T cd01835 127 -MPYSNRRIARLETAFAEVCLRR-------DVPFLDTFTPLLN 161 (193)
T ss_pred -cchhhHHHHHHHHHHHHHHHHc-------CCCeEeCccchhc
Confidence 0122455667777776655432 3667898877654
No 25
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=97.28 E-value=0.0062 Score=49.94 Aligned_cols=46 Identities=15% Similarity=0.234 Sum_probs=28.3
Q ss_pred ceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCC-cEEEEeC
Q 040658 159 GLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGV-RKIGVST 216 (287)
Q Consensus 159 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~~vv~n 216 (287)
.+++|.+|+||..... ..+ ......++...|+++.+..- .+++++.
T Consensus 57 d~vii~~G~ND~~~~~--------~~~----~~~~~~~~~~li~~i~~~~p~~~i~~~~ 103 (169)
T cd01831 57 DLVVINLGTNDFSTGN--------NPP----GEDFTNAYVEFIEELRKRYPDAPIVLML 103 (169)
T ss_pred CEEEEECCcCCCCCCC--------CCC----HHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 5788999999984311 012 24556667777777776543 3555554
No 26
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.97 E-value=0.0082 Score=49.63 Aligned_cols=101 Identities=8% Similarity=0.147 Sum_probs=62.8
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHH-HcCCcEEEEeCCCCCccccccccccCCCCcc
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLY-GLGVRKIGVSTLPPLGCLPATITVFGSDSNE 236 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~-~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~ 236 (287)
-.+++|++|.||....... ... .+....++...|+.+. .....++++++.+|....+... .
T Consensus 62 ~d~v~l~~G~ND~~~~~~~------~~~----~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~--------~ 123 (191)
T cd01834 62 PDVVSIMFGINDSFRGFDD------PVG----LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL--------P 123 (191)
T ss_pred CCEEEEEeecchHhhcccc------ccc----HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC--------C
Confidence 3789999999999753210 112 2455666777777775 3344567777766543322100 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHHHhhC
Q 040658 237 CVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYDLVTK 283 (287)
Q Consensus 237 c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~n 283 (287)
-.+..+.....||+.+++..++. ++.++|++..+.+....
T Consensus 124 ~~~~~~~~~~~~n~~l~~~a~~~-------~~~~iD~~~~~~~~~~~ 163 (191)
T cd01834 124 DGAEYNANLAAYADAVRELAAEN-------GVAFVDLFTPMKEAFQK 163 (191)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHc-------CCeEEecHHHHHHHHHh
Confidence 13456677788888887765431 47889999999876543
No 27
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.88 E-value=0.0068 Score=48.82 Aligned_cols=90 Identities=21% Similarity=0.296 Sum_probs=61.1
Q ss_pred cCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCccccccccccCCCCc
Q 040658 157 SGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGV-RKIGVSTLPPLGCLPATITVFGSDSN 235 (287)
Q Consensus 157 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~~vv~nlpplGc~P~~~~~~~~~~~ 235 (287)
.-.+++|.+|+||.... .+. +....++++.|+++.+..- -++++..++|..-.+
T Consensus 40 ~pd~vvi~~G~ND~~~~----------~~~----~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~----------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN----------RDP----DTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS----------- 94 (157)
T ss_pred CCCEEEEeccCcccccC----------CCH----HHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc-----------
Confidence 34788999999998542 122 3455666677777766533 245666665532211
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHH
Q 040658 236 ECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLY 278 (287)
Q Consensus 236 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~ 278 (287)
.+.....||+.+++.+++.+.. +..+.++|+++.+.
T Consensus 95 -----~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~ 130 (157)
T cd01833 95 -----GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYT 130 (157)
T ss_pred -----hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCC
Confidence 1566889999999999887653 66799999998875
No 28
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.60 E-value=0.015 Score=46.49 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=61.4
Q ss_pred ccCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCCCCccccccccccCCCC
Q 040658 156 ISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYG-LGVRKIGVSTLPPLGCLPATITVFGSDS 234 (287)
Q Consensus 156 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~-~GAR~~vv~nlpplGc~P~~~~~~~~~~ 234 (287)
.+-.++++.+|+||+.... ..+ .....+.+...++++.+ ....+|++++.||.++.|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~--------~~~----~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~--------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG--------DTS----IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG--------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc--------ccC----HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch---------
Confidence 3568899999999996421 001 12344455555666654 5677888999888777664
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 235 NECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 235 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
..+.....+|..+++..++.... ..+.++|++..+.+
T Consensus 123 -----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~ 159 (187)
T cd00229 123 -----LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGD 159 (187)
T ss_pred -----hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCC
Confidence 12234567787777766655432 46888999987753
No 29
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=96.51 E-value=0.012 Score=48.18 Aligned_cols=90 Identities=13% Similarity=0.194 Sum_probs=58.6
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCccccccccccCCCCcc
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGL-GVRKIGVSTLPPLGCLPATITVFGSDSNE 236 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~-GAR~~vv~nlpplGc~P~~~~~~~~~~~~ 236 (287)
-.+.+|++|+||.... .+. +...+++++.++++.+. ...+++++++||..-.+.
T Consensus 52 pd~v~i~~G~ND~~~~----------~~~----~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~----------- 106 (174)
T cd01841 52 PSKVFLFLGTNDIGKE----------VSS----NQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE----------- 106 (174)
T ss_pred CCEEEEEeccccCCCC----------CCH----HHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc-----------
Confidence 3678899999997431 022 34566677777777665 456788888887643221
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 237 CVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 237 c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
+....++....||+.+++..++. .+.++|++..+.+
T Consensus 107 ~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~ 142 (174)
T cd01841 107 IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVD 142 (174)
T ss_pred cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcC
Confidence 12233456788998888764442 2778899988754
No 30
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.38 E-value=0.026 Score=47.22 Aligned_cols=95 Identities=15% Similarity=0.197 Sum_probs=56.5
Q ss_pred ceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchh
Q 040658 159 GLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECV 238 (287)
Q Consensus 159 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~ 238 (287)
++.+|.+|+||...... ... ......+.+.+...+++...++++-+.|++ +++++.||+.-
T Consensus 61 d~vii~~G~ND~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~---------------- 121 (200)
T cd01829 61 DVVVVFLGANDRQDIRD-GDG-YLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS---------------- 121 (200)
T ss_pred CEEEEEecCCCCccccC-CCc-eeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC----------------
Confidence 67888999999864211 100 001112345556667777777777766766 77777777541
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 239 DKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 239 ~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
...+.....+|..+++..++ + .+.++|++..+.+
T Consensus 122 ~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~ 155 (200)
T cd01829 122 PKLSADMVYLNSLYREEVAK----A---GGEFVDVWDGFVD 155 (200)
T ss_pred hhHhHHHHHHHHHHHHHHHH----c---CCEEEEhhHhhcC
Confidence 11234456677766665443 2 2678899887743
No 31
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.11 E-value=0.11 Score=43.18 Aligned_cols=127 Identities=17% Similarity=0.247 Sum_probs=71.6
Q ss_pred CchhHHHHHHhhCCCCCCCCCCCccccCCcccCCceeeecccccccCCCccccCCCHHHHHHHHHHHHHHHHHhhcccch
Q 040658 73 GKLAADFTAENIGFTSYPPAYLSEEAKGKNLLIGANFASGASGYYETTAKLYHAIPLSQQLEHFKDYQRKLEGIAGKTNA 152 (287)
Q Consensus 73 G~~~~d~la~~lgl~~~~pp~~~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~ 152 (287)
|..|+-.++..+|++ + +|++++|.+-. +..+..+.+
T Consensus 21 g~~~~~~~aR~l~~~-~-----------------iNLGfsG~~~l------------e~~~a~~ia-------------- 56 (178)
T PF14606_consen 21 GMAYPAILARRLGLD-V-----------------INLGFSGNGKL------------EPEVADLIA-------------- 56 (178)
T ss_dssp GGSHHHHHHHHHT-E-E-----------------EEEE-TCCCS--------------HHHHHHHH--------------
T ss_pred cccHHHHHHHHcCCC-e-----------------EeeeecCcccc------------CHHHHHHHh--------------
Confidence 578999999999988 2 79999998743 234433322
Q ss_pred hhcccCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCccccccccccC
Q 040658 153 SSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLG-VRKIGVSTLPPLGCLPATITVFG 231 (287)
Q Consensus 153 ~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~G-AR~~vv~nlpplGc~P~~~~~~~ 231 (287)
. .+.++|++..|.| + +.++ +..++...|++|-+.= -.-|+++.-.+ +...
T Consensus 57 -~-~~a~~~~ld~~~N------~---------~~~~----~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~------ 107 (178)
T PF14606_consen 57 -E-IDADLIVLDCGPN------M---------SPEE----FRERLDGFVKTIREAHPDTPILLVSPIP--YPAG------ 107 (178)
T ss_dssp -H-S--SEEEEEESHH------C---------CTTT----HHHHHHHHHHHHHTT-SSS-EEEEE------TTT------
T ss_pred -c-CCCCEEEEEeecC------C---------CHHH----HHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc------
Confidence 1 2348999999999 1 1112 2333445556665442 45566654222 1111
Q ss_pred CCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHH
Q 040658 232 SDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPL 277 (287)
Q Consensus 232 ~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~ 277 (287)
........-.+.+|+.+++.+++++++ .+-+++|+|--.++
T Consensus 108 ----~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~ll 148 (178)
T PF14606_consen 108 ----YFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELL 148 (178)
T ss_dssp ----TS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS
T ss_pred ----ccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhc
Confidence 122233345788999999999999764 56788888876654
No 32
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=96.03 E-value=0.1 Score=48.24 Aligned_cols=75 Identities=19% Similarity=0.124 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHHHHHHhhcccchhhcccC--ceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHH
Q 040658 128 PLSQQLEHFKDYQRKLEGIAGKTNASSIISG--GLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLY 205 (287)
Q Consensus 128 ~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~--sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~ 205 (287)
+|..|-+...+..++ ..+ -...+ -|..||||+||+-. +-..+. +....++.--.+|.++++.|.
T Consensus 161 Dlp~QAr~Lv~rik~---~~~-----i~~~~dWKLi~IfIG~ND~c~-~c~~~~-----~~~~~~~~~~~~i~~Al~~L~ 226 (397)
T KOG3670|consen 161 DLPDQARDLVSRIKK---DKE-----INMKNDWKLITIFIGTNDLCA-YCEGPE-----TPPSPVDQHKRNIRKALEILR 226 (397)
T ss_pred hhHHHHHHHHHHHHh---ccC-----cccccceEEEEEEeccchhhh-hccCCC-----CCCCchhHHHHHHHHHHHHHH
Confidence 566777766554432 212 11222 58899999999976 322211 222345555677899999999
Q ss_pred HcCCcEEEEeC
Q 040658 206 GLGVRKIGVST 216 (287)
Q Consensus 206 ~~GAR~~vv~n 216 (287)
+.==|.+|++-
T Consensus 227 ~nvPR~iV~lv 237 (397)
T KOG3670|consen 227 DNVPRTIVSLV 237 (397)
T ss_pred hcCCceEEEEe
Confidence 98888876553
No 33
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.93 E-value=0.034 Score=45.34 Aligned_cols=85 Identities=19% Similarity=0.298 Sum_probs=54.0
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHH--cCCcEEEEeCCCCCccccccccccCCCCc
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYG--LGVRKIGVSTLPPLGCLPATITVFGSDSN 235 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~--~GAR~~vv~nlpplGc~P~~~~~~~~~~~ 235 (287)
-.++++.+|.||.... .++ +....++.+.|+++.+ .+ .++++.++||.+ +.
T Consensus 49 pd~vvl~~G~ND~~~~----------~~~----~~~~~~l~~li~~~~~~~~~-~~vi~~~~~p~~--~~---------- 101 (169)
T cd01828 49 PKAIFIMIGINDLAQG----------TSD----EDIVANYRTILEKLRKHFPN-IKIVVQSILPVG--EL---------- 101 (169)
T ss_pred CCEEEEEeeccCCCCC----------CCH----HHHHHHHHHHHHHHHHHCCC-CeEEEEecCCcC--cc----------
Confidence 3789999999998531 122 3455566666677766 45 458888888865 10
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHH
Q 040658 236 ECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLY 278 (287)
Q Consensus 236 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~ 278 (287)
....+..+..+|+.+++..++ + ++.++|+++.+.
T Consensus 102 --~~~~~~~~~~~n~~l~~~a~~-----~--~~~~id~~~~~~ 135 (169)
T cd01828 102 --KSIPNEQIEELNRQLAQLAQQ-----E--GVTFLDLWAVFT 135 (169)
T ss_pred --CcCCHHHHHHHHHHHHHHHHH-----C--CCEEEechhhhc
Confidence 112234567888888776552 2 456679887764
No 34
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=95.86 E-value=0.12 Score=42.09 Aligned_cols=87 Identities=18% Similarity=0.319 Sum_probs=52.7
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCccccccccccCCCCcc
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGV-RKIGVSTLPPLGCLPATITVFGSDSNE 236 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~~vv~nlpplGc~P~~~~~~~~~~~~ 236 (287)
-.+++|.+|+||+... .+ .+...+++.+.++++.+.+. -+++++.+||. | ..
T Consensus 51 p~~vvi~~G~ND~~~~----------~~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~--~~-------- 103 (171)
T cd04502 51 PRRVVLYAGDNDLASG----------RT----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---P--AR-------- 103 (171)
T ss_pred CCEEEEEEecCcccCC----------CC----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---C--cc--------
Confidence 3589999999997421 02 34567777777888877643 35666665541 1 10
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 237 CVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 237 c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
...+.....+|+.+++..+ +. -.+.++|++..+.+
T Consensus 104 --~~~~~~~~~~n~~~~~~a~----~~--~~v~~vD~~~~~~~ 138 (171)
T cd04502 104 --WALRPKIRRFNALLKELAE----TR--PNLTYIDVASPMLD 138 (171)
T ss_pred --hhhHHHHHHHHHHHHHHHh----cC--CCeEEEECcHHHhC
Confidence 1122345667776666543 22 25778999987754
No 35
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=95.40 E-value=0.065 Score=45.66 Aligned_cols=87 Identities=20% Similarity=0.189 Sum_probs=53.8
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCccccccccccCCCCcc
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLG-VRKIGVSTLPPLGCLPATITVFGSDSNE 236 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~G-AR~~vv~nlpplGc~P~~~~~~~~~~~~ 236 (287)
-.+++|++|+||+.... +. ++..+++...|+++.+.. ..++++++++|.+..|
T Consensus 90 pd~VvI~~G~ND~~~~~----------~~----~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~------------ 143 (214)
T cd01820 90 PKVVVLLIGTNNIGHTT----------TA----EEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP------------ 143 (214)
T ss_pred CCEEEEEecccccCCCC----------CH----HHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc------------
Confidence 47889999999984311 22 345566777777776653 3468888888755321
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHH
Q 040658 237 CVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLY 278 (287)
Q Consensus 237 c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~ 278 (287)
..+.+....+|+.+++... + ...+.++|++..+.
T Consensus 144 --~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~ 177 (214)
T cd01820 144 --NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFV 177 (214)
T ss_pred --hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhc
Confidence 1123345667776655432 2 12578889998873
No 36
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=94.78 E-value=1.1 Score=37.79 Aligned_cols=14 Identities=21% Similarity=0.335 Sum_probs=12.6
Q ss_pred CceEEEEcccchhH
Q 040658 158 GGLCLVSSGSSDFI 171 (287)
Q Consensus 158 ~sL~~i~iG~ND~~ 171 (287)
-++++|.+|+||..
T Consensus 78 ~d~v~i~lG~ND~~ 91 (216)
T COG2755 78 PDLVIIMLGGNDIG 91 (216)
T ss_pred CCEEEEEeeccccc
Confidence 68899999999985
No 37
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=91.91 E-value=1.7 Score=39.19 Aligned_cols=55 Identities=13% Similarity=-0.022 Sum_probs=37.6
Q ss_pred ceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCC
Q 040658 159 GLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVR--KIGVSTLPPL 220 (287)
Q Consensus 159 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR--~~vv~nlppl 220 (287)
.+++|++|+||..... .. . .....+++--+++.+.++.|.+..-+ +++++++|++
T Consensus 124 ~lVtI~lGgND~C~g~--~d-~----~~~tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 124 ALVIYSMIGNDVCNGP--ND-T----INHTTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred eEEEEEeccchhhcCC--Cc-c----ccCcCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 7888899999986521 11 0 11123445567788888889888755 8899988883
No 38
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=90.30 E-value=1 Score=36.04 Aligned_cols=13 Identities=8% Similarity=0.133 Sum_probs=11.2
Q ss_pred CceEEEEcccchh
Q 040658 158 GGLCLVSSGSSDF 170 (287)
Q Consensus 158 ~sL~~i~iG~ND~ 170 (287)
..+.+|++|+||.
T Consensus 51 ~d~vvi~lGtNd~ 63 (150)
T cd01840 51 RKTVVIGLGTNGP 63 (150)
T ss_pred CCeEEEEecCCCC
Confidence 4678999999997
No 39
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=87.95 E-value=2.4 Score=36.32 Aligned_cols=106 Identities=18% Similarity=0.191 Sum_probs=65.4
Q ss_pred cCceEEEEcccchhHHhhhcCCc-ccccCChhhHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCccccccccccCCCC
Q 040658 157 SGGLCLVSSGSSDFIQNYYINPL-LYKVYTPDQFSDILIESFSAFVQKLYGLG-VRKIGVSTLPPLGCLPATITVFGSDS 234 (287)
Q Consensus 157 ~~sL~~i~iG~ND~~~~~~~~~~-~~~~~~~~~~v~~~v~~i~~~i~~L~~~G-AR~~vv~nlpplGc~P~~~~~~~~~~ 234 (287)
.-++.+|+.|+||-... .+. ....... ++-++++++-++-|-..- -.++++++-||+...-..... .
T Consensus 68 ~p~lvtVffGaNDs~l~---~~~~~~~hvPl----~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~----~ 136 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLP---EPSSLGQHVPL----EEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQE----Q 136 (245)
T ss_pred CceEEEEEecCccccCC---CCCCCCCccCH----HHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHh----c
Confidence 44789999999997531 111 1112233 344566666666665553 346777777776655333322 1
Q ss_pred cchh---hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHHH
Q 040658 235 NECV---DKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYDL 280 (287)
Q Consensus 235 ~~c~---~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~i 280 (287)
..|. ++.|+.+..|++.+.+..++++ +..+|.++.+.+.
T Consensus 137 e~~~~~~~RtNe~~~~Ya~ac~~la~e~~-------l~~vdlws~~Q~~ 178 (245)
T KOG3035|consen 137 EPYVLGPERTNETVGTYAKACANLAQEIG-------LYVVDLWSKMQES 178 (245)
T ss_pred cchhccchhhhhHHHHHHHHHHHHHHHhC-------CeeeeHHhhhhhc
Confidence 2444 3589999999999988777763 5566776666553
No 40
>PLN02757 sirohydrochlorine ferrochelatase
Probab=84.33 E-value=2.8 Score=34.03 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=39.5
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 040658 197 FSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDI 273 (287)
Q Consensus 197 i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~ 273 (287)
+.++|++|.+.|+|+|+|. |.++... .....-+.+.++++++++|+.+|++...
T Consensus 60 l~eal~~l~~~g~~~vvVv--------P~FL~~G---------------~H~~~DIp~~v~~~~~~~p~~~i~~~~p 113 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIVS--------PFFLSPG---------------RHWQEDIPALTAEAAKEHPGVKYLVTAP 113 (154)
T ss_pred HHHHHHHHHHCCCCEEEEE--------EhhhcCC---------------cchHhHHHHHHHHHHHHCCCcEEEECCC
Confidence 4566788888999999984 7776532 1223456788888999999999987644
No 41
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.94 E-value=6.4 Score=35.77 Aligned_cols=83 Identities=18% Similarity=0.185 Sum_probs=51.0
Q ss_pred CceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCC---cEEEEeCCCCCccccccccccCCCC
Q 040658 158 GGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGV---RKIGVSTLPPLGCLPATITVFGSDS 234 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA---R~~vv~nlpplGc~P~~~~~~~~~~ 234 (287)
=+..+|.+|.||.-..... .......+ +.=...+.+.+.++.+.=. =+++.+++|+.-
T Consensus 178 ~a~vVV~lGaND~q~~~~g-d~~~kf~S-----~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r------------- 238 (354)
T COG2845 178 PAAVVVMLGANDRQDFKVG-DVYEKFRS-----DEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR------------- 238 (354)
T ss_pred ccEEEEEecCCCHHhcccC-CeeeecCc-----hHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc-------------
Confidence 3667789999999763322 11100001 2234455555555554433 367888987632
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhh
Q 040658 235 NECVDKINGDAVSFNNKLNATSQSLVNK 262 (287)
Q Consensus 235 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~ 262 (287)
.+.+|+-...+|...++.++++..+
T Consensus 239 ---~~~l~~dm~~ln~iy~~~vE~~~gk 263 (354)
T COG2845 239 ---KKKLNADMVYLNKIYSKAVEKLGGK 263 (354)
T ss_pred ---ccccchHHHHHHHHHHHHHHHhCCe
Confidence 2456677889999999999988644
No 42
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=77.59 E-value=2.2 Score=39.41 Aligned_cols=69 Identities=14% Similarity=0.105 Sum_probs=50.6
Q ss_pred ccCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccc
Q 040658 156 ISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATIT 228 (287)
Q Consensus 156 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~ 228 (287)
..+.++..|+|+||+...-.... ...--..+......+.+++..++..+.-+||..+.|.++..|..+.
T Consensus 97 ~~~~~~~~~a~gnd~A~gga~~~----~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGARST----EPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred CcccccCcccccccHhhhccccc----cccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 46788999999999986432211 1010023344566777889999999999999999999999998765
No 43
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=77.42 E-value=14 Score=32.02 Aligned_cols=82 Identities=21% Similarity=0.324 Sum_probs=48.8
Q ss_pred EEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhH
Q 040658 163 VSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKIN 242 (287)
Q Consensus 163 i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n 242 (287)
++.|.+.....| . .+. ....+ ...+-+.+.++.|...|.|+++++|=. + +
T Consensus 62 i~yG~s~~h~~f-p-GTi--sl~~~----t~~~~l~di~~sl~~~Gf~~ivivngH------------g----G------ 111 (237)
T PF02633_consen 62 IPYGCSPHHMGF-P-GTI--SLSPE----TLIALLRDILRSLARHGFRRIVIVNGH------------G----G------ 111 (237)
T ss_dssp B--BB-GCCTTS-T-T-B--BB-HH----HHHHHHHHHHHHHHHHT--EEEEEESS------------T----T------
T ss_pred CccccCcccCCC-C-CeE--EeCHH----HHHHHHHHHHHHHHHcCCCEEEEEECC------------H----h------
Confidence 478888876533 1 111 12332 234445677888999999999999832 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHHHH
Q 040658 243 GDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPLYD 279 (287)
Q Consensus 243 ~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ 279 (287)
....|+..+++|++++++..+..+|.+.+..+
T Consensus 112 -----N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~ 143 (237)
T PF02633_consen 112 -----NIAALEAAARELRQEYPGVKVFVINWWQLAED 143 (237)
T ss_dssp -----HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHC
T ss_pred -----HHHHHHHHHHHHHhhCCCcEEEEeechhccch
Confidence 11346777788888889999999999887654
No 44
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=74.37 E-value=8.2 Score=28.41 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=36.1
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 040658 198 SAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLD 272 (287)
Q Consensus 198 ~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D 272 (287)
.+.+++|.+.|+++++|. |.++... ......+.+.+++++.++|+.++.+.+
T Consensus 47 ~~~l~~l~~~g~~~v~vv--------Plfl~~G---------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 47 AEALDELAAQGATRIVVV--------PLFLLAG---------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHcCCCEEEEE--------eeEeCCC---------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 356788888999999885 6665432 122345566777777788999888764
No 45
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=72.70 E-value=15 Score=33.19 Aligned_cols=64 Identities=14% Similarity=0.286 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 040658 192 ILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVL 271 (287)
Q Consensus 192 ~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~ 271 (287)
.-++.+.+.++++.++|.+.|+++++|.. +-+ .+ .+..|. |.-+++.+..+++++|+.-++ .
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~-----~g------s~A~~~-----~g~v~~air~iK~~~p~l~vi-~ 109 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPEH-KDE-----IG------SEAYDP-----DGIVQRAIRAIKEAVPELVVI-T 109 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCC-----Cc------ccccCC-----CChHHHHHHHHHHhCCCcEEE-E
Confidence 34677888999999999999999999642 211 11 111111 345678888899999986553 4
Q ss_pred ec
Q 040658 272 DI 273 (287)
Q Consensus 272 D~ 273 (287)
|+
T Consensus 110 Dv 111 (314)
T cd00384 110 DV 111 (314)
T ss_pred ee
Confidence 54
No 46
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=71.39 E-value=16 Score=33.12 Aligned_cols=63 Identities=17% Similarity=0.269 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 040658 193 LIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLD 272 (287)
Q Consensus 193 ~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D 272 (287)
-++.+.+.++++.++|.+.|+++++|+. . ...+ .+..|. |.-+++.+..+++++|+.-++ .|
T Consensus 59 sid~l~~~~~~~~~~Gi~~v~lFgv~~~-K-----d~~g------s~A~~~-----~g~v~~air~iK~~~pdl~vi-~D 120 (322)
T PRK13384 59 PESALADEIERLYALGIRYVMPFGISHH-K-----DAKG------SDTWDD-----NGLLARMVRTIKAAVPEMMVI-PD 120 (322)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCC-C-----CCCc------ccccCC-----CChHHHHHHHHHHHCCCeEEE-ee
Confidence 4677788899999999999999999642 2 1111 111121 455678889999999987653 45
Q ss_pred c
Q 040658 273 I 273 (287)
Q Consensus 273 ~ 273 (287)
+
T Consensus 121 V 121 (322)
T PRK13384 121 I 121 (322)
T ss_pred e
Confidence 4
No 47
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=70.35 E-value=12 Score=33.98 Aligned_cols=64 Identities=17% Similarity=0.279 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 040658 194 IESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDI 273 (287)
Q Consensus 194 v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~ 273 (287)
++.+.+.++++.++|.+.|+++++.+ |......+ .+..|. |.-+.+.+..+++.+|+.-+ ..|+
T Consensus 56 id~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g------s~a~~~-----~g~v~~air~iK~~~pdl~v-i~Dv 119 (324)
T PF00490_consen 56 IDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG------SEAYNP-----DGLVQRAIRAIKKAFPDLLV-ITDV 119 (324)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS-------GGGGST-----TSHHHHHHHHHHHHSTTSEE-EEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch------hcccCC-----CChHHHHHHHHHHhCCCcEE-EEec
Confidence 56777889999999999999998843 33332221 111222 44567888899999999655 4554
No 48
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=69.74 E-value=3 Score=30.99 Aligned_cols=55 Identities=15% Similarity=0.169 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecch
Q 040658 198 SAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQ 275 (287)
Q Consensus 198 ~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~ 275 (287)
.+.+++|.+.|+++|+|+ |.++... .....-+.+.+++++.++|+.++.+.....
T Consensus 40 ~~~l~~l~~~g~~~ivvv--------P~fL~~G---------------~h~~~DIp~~l~~~~~~~~~~~v~~~~pLG 94 (105)
T PF01903_consen 40 EEALERLVAQGARRIVVV--------PYFLFPG---------------YHVKRDIPEALAEARERHPGIEVRVAPPLG 94 (105)
T ss_dssp HHCCHHHHCCTCSEEEEE--------EESSSSS---------------HHHHCHHHHHHCHHHHCSTTEEEEE---GG
T ss_pred HHHHHHHHHcCCCeEEEE--------eeeecCc---------------cchHhHHHHHHHHHHhhCCceEEEECCCCC
Confidence 355688889999999885 6676431 112233677888999999999998875443
No 49
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=68.58 E-value=20 Score=32.54 Aligned_cols=65 Identities=12% Similarity=0.167 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCCCCc-cccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 040658 193 LIESFSAFVQKLYGLGVRKIGVSTLPPLG-CLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVL 271 (287)
Q Consensus 193 ~v~~i~~~i~~L~~~GAR~~vv~nlpplG-c~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~ 271 (287)
-++.+.+.++++.++|.+.|+++++|+-. .-+.. + .+..| =|.-+++.+..+++++|+.-+ ..
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~----g------s~a~~-----~~g~v~~air~iK~~~pdl~v-i~ 112 (320)
T cd04824 49 GVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS----G------SAADD-----EDGPVIQAIKLIREEFPELLI-AC 112 (320)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc----c------ccccC-----CCChHHHHHHHHHHhCCCcEE-EE
Confidence 46777888999999999999999996532 22320 1 01111 134557788889999998654 34
Q ss_pred ec
Q 040658 272 DI 273 (287)
Q Consensus 272 D~ 273 (287)
|+
T Consensus 113 Dv 114 (320)
T cd04824 113 DV 114 (320)
T ss_pred ee
Confidence 54
No 50
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=68.10 E-value=19 Score=32.63 Aligned_cols=66 Identities=14% Similarity=0.261 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 040658 192 ILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVL 271 (287)
Q Consensus 192 ~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~ 271 (287)
.-++.+.+.++++.++|.+.|++++++|-. .....+ .+..|. |.-+++.+..+++++|+.-++ .
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~----~KD~~g------s~A~~~-----~g~v~~air~iK~~~p~l~vi-~ 114 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTPPE----LKSEDG------SEAYNP-----DNLVCRAIRAIKEAFPELGII-T 114 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCCcc----cCCccc------ccccCC-----CChHHHHHHHHHHhCCCcEEE-E
Confidence 346788889999999999999999985311 111111 111111 345678888899999986553 4
Q ss_pred ec
Q 040658 272 DI 273 (287)
Q Consensus 272 D~ 273 (287)
|+
T Consensus 115 DV 116 (320)
T cd04823 115 DV 116 (320)
T ss_pred ee
Confidence 54
No 51
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=67.77 E-value=20 Score=32.55 Aligned_cols=63 Identities=13% Similarity=0.236 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 040658 193 LIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLD 272 (287)
Q Consensus 193 ~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D 272 (287)
-++.+.+.++++.++|.+.|+++++|. .+...+ .+..|. |.-+.+.+..+++++|+.-++ .|
T Consensus 57 s~d~l~~~v~~~~~~Gi~av~LFgv~~------~Kd~~g------s~A~~~-----~g~v~rair~iK~~~p~l~vi-~D 118 (323)
T PRK09283 57 SIDLLVKEAEEAVELGIPAVALFGVPE------LKDEDG------SEAYNP-----DGLVQRAIRAIKKAFPELGVI-TD 118 (323)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCcCC------CCCccc------ccccCC-----CCHHHHHHHHHHHhCCCcEEE-Ee
Confidence 467778889999999999999999842 222211 122222 445678888999999986553 45
Q ss_pred c
Q 040658 273 I 273 (287)
Q Consensus 273 ~ 273 (287)
+
T Consensus 119 V 119 (323)
T PRK09283 119 V 119 (323)
T ss_pred e
Confidence 4
No 52
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=64.28 E-value=6.1 Score=29.34 Aligned_cols=20 Identities=25% Similarity=0.232 Sum_probs=14.2
Q ss_pred CCCchhHHHHHHHHHHH-HHH
Q 040658 1 MGLSNSLLATFLFLCLE-LYV 20 (287)
Q Consensus 1 ~~~~~~~~~~~~~~~~~-~~~ 20 (287)
|+++..+|++++|++++ ++.
T Consensus 1 MaSK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISS 21 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 89888888888875544 443
No 53
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=58.95 E-value=37 Score=26.35 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 040658 195 ESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLD 272 (287)
Q Consensus 195 ~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D 272 (287)
-++.+++++|.+.|.|+|+|.. .++.. + ..| ..|.+.+++++ +|..+|.+..
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~P--------l~l~~-G--------------~e~-~di~~~v~~~~--~~~~~i~~g~ 107 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQS--------LHIIP-G--------------EEY-EKLKREVDAFK--KGFKKIKLGR 107 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEe--------CeeEC-c--------------HHH-HHHHHHHHHHh--CCCceEEEcc
Confidence 4567889999999999999974 34332 1 123 56777788777 6777777764
No 54
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=58.17 E-value=37 Score=25.56 Aligned_cols=51 Identities=20% Similarity=0.388 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 040658 197 FSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLD 272 (287)
Q Consensus 197 i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D 272 (287)
+.+.+++|.+.|+++++|. |.++... ..+ ..+.+.+++++++ |+.++.+..
T Consensus 47 ~~~~l~~l~~~g~~~i~vv--------P~fL~~G---------------~h~-~~i~~~~~~~~~~-~~~~i~~~~ 97 (117)
T cd03414 47 LPEALERLRALGARRVVVL--------PYLLFTG---------------VLM-DRIEEQVAELAAE-PGIEFVLAP 97 (117)
T ss_pred HHHHHHHHHHcCCCEEEEE--------echhcCC---------------chH-HHHHHHHHHHHhC-CCceEEECC
Confidence 4466788888999999885 5555421 112 2356677788877 888887754
No 55
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=55.33 E-value=26 Score=31.72 Aligned_cols=66 Identities=14% Similarity=0.224 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 040658 192 ILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVL 271 (287)
Q Consensus 192 ~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~ 271 (287)
.-++.+.+.++++.++|.|-|+++++|+.. .....++ .+-.-|..+++.+..+++.+|+.-+ ..
T Consensus 58 ~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~gs-----------~A~~~~givqravr~ik~~~p~l~i-it 121 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDETGS-----------EAYDPDGIVQRAVRAIKEAFPELVV-IT 121 (330)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCcccc-----------cccCCCChHHHHHHHHHHhCCCeEE-Ee
Confidence 347778888999999999999999998632 2221110 1112245567888899999995443 45
Q ss_pred ec
Q 040658 272 DI 273 (287)
Q Consensus 272 D~ 273 (287)
|+
T Consensus 122 Dv 123 (330)
T COG0113 122 DV 123 (330)
T ss_pred ee
Confidence 54
No 56
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=55.19 E-value=23 Score=31.45 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=56.1
Q ss_pred cCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcc
Q 040658 157 SGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNE 236 (287)
Q Consensus 157 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~ 236 (287)
++-+|-++|--||--.. + ..+.+..--.=++.+++.++.|.+.|.|.+++++++| |......+
T Consensus 39 ~nliyPlFI~e~~dd~~----p----I~SmPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~----~~~Kd~~g----- 101 (340)
T KOG2794|consen 39 ANLIYPLFIHEGEDDFT----P----IDSMPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVP----EALKDPTG----- 101 (340)
T ss_pred hheeeeEEEecCccccc----c----cccCCchhHHHHHHHHHHHHHHHHhccceEEEecCCC----ccccCccc-----
Confidence 55677777766664311 0 1122222233477789999999999999999999975 22221111
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 040658 237 CVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDI 273 (287)
Q Consensus 237 c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~ 273 (287)
. .+..=|.-.-+.+..|+..+|+.-| +.|+
T Consensus 102 --s----~Ads~~gpvi~ai~~lr~~fPdL~i-~cDV 131 (340)
T KOG2794|consen 102 --S----EADSDNGPVIRAIRLLRDRFPDLVI-ACDV 131 (340)
T ss_pred --c----cccCCCCcHHHHHHHHHHhCcceEE-Eeee
Confidence 0 0111234445778888999998765 4564
No 57
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.53 E-value=19 Score=33.66 Aligned_cols=46 Identities=26% Similarity=0.461 Sum_probs=32.6
Q ss_pred HHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecc
Q 040658 204 LYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIY 274 (287)
Q Consensus 204 L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~ 274 (287)
+++.|+..++. +-|.||.|.-... +-++.+|++++|+++++-+|.-
T Consensus 328 ~i~~g~~nvIc--lqPFGCmPnhI~~-----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 328 LIESGVDNVIC--LQPFGCMPNHIVS-----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHcCCCceEE--ecCccCCcHHHHH-----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 45567776655 6799999943221 4567788888898888888765
No 58
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=52.75 E-value=44 Score=30.76 Aligned_cols=55 Identities=9% Similarity=0.129 Sum_probs=38.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHH
Q 040658 185 TPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLN 253 (287)
Q Consensus 185 ~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~ 253 (287)
+.++++..++..+.+.++.|+++|+|.+-+=. |.+.. .|.+.+...++.+|..++
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~IQiDe-P~l~~-------------~~~~~~~~~v~~~n~~~~ 200 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDIIQFDE-PAFNV-------------FFDEVNDWGVAALERAIE 200 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEecc-cHHhh-------------hhHHHHHHHHHHHHHHHc
Confidence 55788999999999999999999999976642 22221 244445555566665554
No 59
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=49.20 E-value=33 Score=26.79 Aligned_cols=27 Identities=22% Similarity=0.209 Sum_probs=24.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhCC
Q 040658 238 VDKINGDAVSFNNKLNATSQSLVNKLS 264 (287)
Q Consensus 238 ~~~~n~~~~~~N~~L~~~l~~l~~~~p 264 (287)
.++.+.++..||..|++.|+++.++|.
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H~ 96 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKHH 96 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 567788999999999999999998864
No 60
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=48.94 E-value=60 Score=30.23 Aligned_cols=32 Identities=19% Similarity=0.412 Sum_probs=27.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 040658 185 TPDQFSDILIESFSAFVQKLYGLGVRKIGVST 216 (287)
Q Consensus 185 ~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~n 216 (287)
+.++++..++..+.+.++.|+++|+|.|-+=.
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQiDe 191 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQLDD 191 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEecC
Confidence 45789999999999999999999999976543
No 61
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=46.37 E-value=68 Score=28.25 Aligned_cols=86 Identities=15% Similarity=0.128 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 040658 190 SDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLV 269 (287)
Q Consensus 190 v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~ 269 (287)
++++++.+...++.|....-+-=+|+++.|+ |...+.... =.-..|..++ +.|+..+++|.++++ ++.
T Consensus 147 ~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV---rl~~T~~~~----d~~~an~~SK---s~Lr~a~~~l~~~~~--~v~ 214 (251)
T PF08885_consen 147 VEEILEDLEAIIDLLRSINPDIKIILTVSPV---RLIATFRDR----DGLVANQYSK---STLRAAAHELVRAFD--DVD 214 (251)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEeccc---hhhcccccc----cchhhhhhhH---HHHHHHHHHHHhcCC--Cce
Confidence 5677778888888887776654467778774 444432211 1122244444 467888899988654 678
Q ss_pred EEecchHHHHHhhCCCCC
Q 040658 270 VLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 270 ~~D~~~~~~~ii~nP~~Y 287 (287)
||-.|.++++-+.++.-|
T Consensus 215 YFPSYEiv~d~lrdyrfy 232 (251)
T PF08885_consen 215 YFPSYEIVMDELRDYRFY 232 (251)
T ss_pred EcchHhhccCcccccccc
Confidence 999999988777666433
No 62
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=43.97 E-value=22 Score=25.13 Aligned_cols=21 Identities=24% Similarity=0.259 Sum_probs=15.6
Q ss_pred HHHHHHHHHHcCCcEEEEeCC
Q 040658 197 FSAFVQKLYGLGVRKIGVSTL 217 (287)
Q Consensus 197 i~~~i~~L~~~GAR~~vv~nl 217 (287)
+.+.+.+|.++|||-|+|..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 345678899999999999765
No 63
>PRK13660 hypothetical protein; Provisional
Probab=43.64 E-value=1.5e+02 Score=24.80 Aligned_cols=27 Identities=11% Similarity=0.079 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 040658 190 SDILIESFSAFVQKLYGLGVRKIGVST 216 (287)
Q Consensus 190 v~~~v~~i~~~i~~L~~~GAR~~vv~n 216 (287)
+..+-..+++.|.++++.|.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 445666788999999999999998754
No 64
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=43.32 E-value=68 Score=26.61 Aligned_cols=29 Identities=14% Similarity=0.116 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 040658 188 QFSDILIESFSAFVQKLYGLGVRKIGVST 216 (287)
Q Consensus 188 ~~v~~~v~~i~~~i~~L~~~GAR~~vv~n 216 (287)
.-+..+-..+.+.|.+|++.|.+.|+.-+
T Consensus 22 ~~~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 22 PKIQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 34566778899999999999999998754
No 65
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=40.47 E-value=94 Score=24.41 Aligned_cols=37 Identities=11% Similarity=0.182 Sum_probs=25.8
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHH
Q 040658 197 FSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVS 247 (287)
Q Consensus 197 i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~ 247 (287)
+.+.|++|.+.|+|+++|+- |.+.. .|.+.+-++-..
T Consensus 79 ~~~~l~~l~~~G~~~i~v~p-------~gF~~-------D~~Etl~di~~e 115 (135)
T cd00419 79 TDDALEELAKEGVKNVVVVP-------IGFVS-------DHLETLYELDIE 115 (135)
T ss_pred HHHHHHHHHHcCCCeEEEEC-------Ccccc-------ccHHHHHHHHHH
Confidence 34667889999999999963 23433 588887765443
No 66
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=39.69 E-value=87 Score=21.98 Aligned_cols=66 Identities=14% Similarity=0.146 Sum_probs=33.5
Q ss_pred cCCcEEEEeCCCCCccccccccccCCCCcchhhhhH---HHHHHHHHHHHHHHHHHHhhCCCcEE-EEEec
Q 040658 207 LGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKIN---GDAVSFNNKLNATSQSLVNKLSGLNL-VVLDI 273 (287)
Q Consensus 207 ~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n---~~~~~~N~~L~~~l~~l~~~~pg~~i-~~~D~ 273 (287)
-|||.|+++.++=..-.|....... ...+...... +.=...-++|+++.+.|+++.|+.+. +++|+
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~-~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VDT 78 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPG-PGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVDT 78 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCC-CCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeecC
Confidence 4899999998764441111100000 0112222221 22233446777778888888888533 34553
No 67
>COG1031 Uncharacterized Fe-S oxidoreductase [Energy production and conversion]
Probab=38.82 E-value=1e+02 Score=29.68 Aligned_cols=70 Identities=19% Similarity=0.121 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 040658 194 IESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDI 273 (287)
Q Consensus 194 v~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~ 273 (287)
.+.+.+.|+.||+.|+|+|=+-- ..|+=.+.... .++-...-|- +.|++....++..-|+.+...+|-
T Consensus 217 ~e~Vv~EVkaLY~~GvrhFRlGR---Q~difsy~~~~---~g~e~P~PnP------ealekL~~Gir~~AP~l~tLHiDN 284 (560)
T COG1031 217 PEDVVEEVKALYRAGVRHFRLGR---QADIFSYGADD---NGGEVPRPNP------EALEKLFRGIRNVAPNLKTLHIDN 284 (560)
T ss_pred HHHHHHHHHHHHHhccceeeecc---ccceeeecccc---cCCCCCCCCH------HHHHHHHHHHHhhCCCCeeeeecC
Confidence 44555778999999999996532 23333333221 1111333332 344555566666668888888875
Q ss_pred ch
Q 040658 274 YQ 275 (287)
Q Consensus 274 ~~ 275 (287)
-+
T Consensus 285 aN 286 (560)
T COG1031 285 AN 286 (560)
T ss_pred CC
Confidence 43
No 68
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=38.69 E-value=1.2e+02 Score=27.05 Aligned_cols=63 Identities=11% Similarity=0.018 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCC
Q 040658 130 SQQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGV 209 (287)
Q Consensus 130 ~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA 209 (287)
..++++|++..+.. ....++..++|-+|+|=+.. ++.++++...|.-|+.+|.
T Consensus 16 ~~e~~~~l~~f~~~---------~~~~~~~f~VIK~GG~~~~~------------------~~~~~~l~~dla~L~~lGl 68 (271)
T cd04236 16 PREARYWLTQFQIA---------MPNDWPAFAVLEVDHSVFRS------------------LEMVQSLSFGLAFLQRMDM 68 (271)
T ss_pred HHHHHHHHHHhhcc---------CCCCCCCEEEEEEChhhhcC------------------chhHHHHHHHHHHHHHCCC
Confidence 35666666654321 11135678888999885421 1345667788899999999
Q ss_pred cEEEEeCCCC
Q 040658 210 RKIGVSTLPP 219 (287)
Q Consensus 210 R~~vv~nlpp 219 (287)
|-++|.+-+|
T Consensus 69 ~~VlVHGggp 78 (271)
T cd04236 69 KLLVVMGLSA 78 (271)
T ss_pred eEEEEeCCCh
Confidence 9999999877
No 69
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=38.66 E-value=64 Score=24.73 Aligned_cols=27 Identities=19% Similarity=0.054 Sum_probs=23.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhCC
Q 040658 238 VDKINGDAVSFNNKLNATSQSLVNKLS 264 (287)
Q Consensus 238 ~~~~n~~~~~~N~~L~~~l~~l~~~~p 264 (287)
.++.+.+...||..|++.|++++++|.
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H~ 83 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQHH 83 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 567788999999999999999999874
No 70
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=38.25 E-value=41 Score=25.11 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHcCCcEEEEeCC
Q 040658 196 SFSAFVQKLYGLGVRKIGVSTL 217 (287)
Q Consensus 196 ~i~~~i~~L~~~GAR~~vv~nl 217 (287)
.+.+.+.+|.++||+-|+|..+
T Consensus 75 ~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 75 VVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHcCCCeEEEech
Confidence 4667788999999999999754
No 71
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=36.39 E-value=16 Score=28.82 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=13.8
Q ss_pred HcCCcEEEEeCCCCCc
Q 040658 206 GLGVRKIGVSTLPPLG 221 (287)
Q Consensus 206 ~~GAR~~vv~nlpplG 221 (287)
..|||+||++|+|.+-
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 4699999999999764
No 72
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=35.23 E-value=98 Score=26.21 Aligned_cols=49 Identities=16% Similarity=0.189 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecc
Q 040658 195 ESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIY 274 (287)
Q Consensus 195 ~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~ 274 (287)
.++..+++.|.+.|+++|.+..+ .. + ...++.+.+++|+++|+..-+-
T Consensus 136 ~Tl~~ai~~L~~~G~~~I~v~~l-----------l~------~---------------~~gl~~l~~~~p~v~i~~~~id 183 (207)
T TIGR01091 136 GTMIAALDLLKKRGAKKIKVLSI-----------VA------A---------------PEGIEAVEKAHPDVDIYTAAID 183 (207)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE-----------ec------C---------------HHHHHHHHHHCCCCEEEEEEEC
Confidence 46778899999999999988765 10 1 2445567778999999877543
Q ss_pred h
Q 040658 275 Q 275 (287)
Q Consensus 275 ~ 275 (287)
.
T Consensus 184 ~ 184 (207)
T TIGR01091 184 E 184 (207)
T ss_pred C
Confidence 3
No 73
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=33.84 E-value=1.5e+02 Score=26.77 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=29.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCccc
Q 040658 185 TPDQFSDILIESFSAFVQKLYGLGVRKIGVSTLPPLGCL 223 (287)
Q Consensus 185 ~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~nlpplGc~ 223 (287)
+..+++..++..+...++.|+++|++ ++.+.=|.+...
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~~ 182 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALAEG 182 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhcc
Confidence 45678999999999999999999996 555554544433
No 74
>PRK06233 hypothetical protein; Provisional
Probab=32.81 E-value=71 Score=29.80 Aligned_cols=32 Identities=28% Similarity=0.514 Sum_probs=28.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 040658 185 TPDQFSDILIESFSAFVQKLYGLGVRKIGVST 216 (287)
Q Consensus 185 ~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~n 216 (287)
+.++++..++..+.+.++.|+++|+|.+-+=.
T Consensus 161 ~~eel~~dlA~a~~~Ei~~L~~aG~~~IQiDe 192 (372)
T PRK06233 161 SWDDYLDDLAQAYHDTIQHFYDLGARYIQLDD 192 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 45789999999999999999999999976644
No 75
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=32.13 E-value=75 Score=30.82 Aligned_cols=54 Identities=19% Similarity=0.194 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecc
Q 040658 195 ESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIY 274 (287)
Q Consensus 195 ~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~ 274 (287)
.++.+.++.|.+.|++-++|=. +..|+..+.++++++++++|+..++-.|+-
T Consensus 226 ~~~~~~a~~Lv~aGvd~i~~D~----------------------------a~~~~~~~~~~i~~ik~~~p~~~v~agnv~ 277 (479)
T PRK07807 226 GDVAAKARALLEAGVDVLVVDT----------------------------AHGHQEKMLEALRAVRALDPGVPIVAGNVV 277 (479)
T ss_pred hhHHHHHHHHHHhCCCEEEEec----------------------------cCCccHHHHHHHHHHHHHCCCCeEEeeccC
Confidence 4667888999999998865521 233577788999999999999998886665
Q ss_pred hH
Q 040658 275 QP 276 (287)
Q Consensus 275 ~~ 276 (287)
+.
T Consensus 278 t~ 279 (479)
T PRK07807 278 TA 279 (479)
T ss_pred CH
Confidence 43
No 76
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=31.49 E-value=54 Score=26.48 Aligned_cols=23 Identities=30% Similarity=0.364 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCC
Q 040658 197 FSAFVQKLYGLGVRKIGVSTLPP 219 (287)
Q Consensus 197 i~~~i~~L~~~GAR~~vv~nlpp 219 (287)
+.+.|++|.+.|+++++|+.+-|
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P 123 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYP 123 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCc
Confidence 44778999999999999987765
No 77
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=31.00 E-value=1.6e+02 Score=24.97 Aligned_cols=47 Identities=19% Similarity=0.183 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 040658 195 ESFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDI 273 (287)
Q Consensus 195 ~~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~ 273 (287)
.++..+++.|.+.|++++.+..+ +. + ...++.+.+++|+++|+..-+
T Consensus 138 ~Tl~~ai~~L~~~G~~~I~~~~l--l~---------------~---------------~~gl~~l~~~~p~v~i~~~~i 184 (209)
T PRK00129 138 GSAIAAIDLLKKRGAKNIKVLCL--VA---------------A---------------PEGIKALEEAHPDVEIYTAAI 184 (209)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE--ec---------------C---------------HHHHHHHHHHCCCcEEEEEee
Confidence 36778889999999999988765 10 1 245566777889998887544
No 78
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=30.55 E-value=79 Score=23.78 Aligned_cols=29 Identities=14% Similarity=0.303 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhhCCCcEEEEEecchHHHHH
Q 040658 251 KLNATSQSLVNKLSGLNLVVLDIYQPLYDL 280 (287)
Q Consensus 251 ~L~~~l~~l~~~~pg~~i~~~D~~~~~~~i 280 (287)
.+.-.+.+|..+||++.|+.+|+.. ..++
T Consensus 38 ~i~P~~~~La~~y~~v~Flkvdvde-~~~~ 66 (106)
T KOG0907|consen 38 AIAPKFEKLAEKYPDVVFLKVDVDE-LEEV 66 (106)
T ss_pred hhhhHHHHHHHHCCCCEEEEEeccc-CHhH
Confidence 3456889999999999999999987 4444
No 79
>PLN00123 isocitrate dehydrogenase (NAD+)
Probab=26.13 E-value=1e+02 Score=28.67 Aligned_cols=36 Identities=17% Similarity=0.273 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 252 LNATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 252 L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
.++.+++..++||++++-..=+-++.+.++.+|.+|
T Consensus 205 f~~~~~eva~eyPdV~~~~~~VDa~~~~Lv~~P~~f 240 (360)
T PLN00123 205 FLESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQF 240 (360)
T ss_pred HHHHHHHHHhhCCCceEeeeeHHHHHHHHhhCcccC
Confidence 345566677789999888888888999999999987
No 80
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=25.96 E-value=1.4e+02 Score=25.71 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchHH
Q 040658 239 DKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIYQPL 277 (287)
Q Consensus 239 ~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~~~~ 277 (287)
.........|=+.|+++++++++..|+++|++.-.+.++
T Consensus 120 ~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~ 158 (259)
T cd01823 120 GARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLF 158 (259)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccc
Confidence 334455678888999999999998999999888766554
No 81
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=25.87 E-value=65 Score=24.08 Aligned_cols=18 Identities=22% Similarity=0.422 Sum_probs=14.9
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 040658 198 SAFVQKLYGLGVRKIGVS 215 (287)
Q Consensus 198 ~~~i~~L~~~GAR~~vv~ 215 (287)
.+.+++|.+.|+|+|+++
T Consensus 45 ~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 45 DDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 466788899999999875
No 82
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=25.85 E-value=64 Score=25.10 Aligned_cols=19 Identities=16% Similarity=0.338 Sum_probs=16.6
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 040658 197 FSAFVQKLYGLGVRKIGVS 215 (287)
Q Consensus 197 i~~~i~~L~~~GAR~~vv~ 215 (287)
+.+.+++|.+.|+++|+|+
T Consensus 46 l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 46 WRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred HHHHHHHHHHCCCCEEEEe
Confidence 5677899999999999997
No 83
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=25.18 E-value=98 Score=22.26 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCC
Q 040658 197 FSAFVQKLYGLGVRKIGVSTLPP 219 (287)
Q Consensus 197 i~~~i~~L~~~GAR~~vv~nlpp 219 (287)
+.+.+++|.+.|.++++|+-+.+
T Consensus 47 i~~~l~~l~~~g~~~vvvvPl~~ 69 (101)
T cd03409 47 TEEAIRELAEEGYQRVVIVPLAP 69 (101)
T ss_pred HHHHHHHHHHcCCCeEEEEeCcc
Confidence 34667889999999999976544
No 84
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=24.85 E-value=1e+02 Score=27.20 Aligned_cols=25 Identities=28% Similarity=0.365 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeC
Q 040658 192 ILIESFSAFVQKLYGLGVRKIGVST 216 (287)
Q Consensus 192 ~~v~~i~~~i~~L~~~GAR~~vv~n 216 (287)
.++.-+.+..+.|+..|.|||+++|
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEe
Confidence 3455566778899999999999998
No 85
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=24.60 E-value=1.4e+02 Score=22.74 Aligned_cols=26 Identities=12% Similarity=0.144 Sum_probs=22.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhC
Q 040658 238 VDKINGDAVSFNNKLNATSQSLVNKL 263 (287)
Q Consensus 238 ~~~~n~~~~~~N~~L~~~l~~l~~~~ 263 (287)
.++....+..||..|.+.|.++.+++
T Consensus 56 ~~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 56 PEQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45667789999999999999998875
No 86
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=24.54 E-value=83 Score=29.11 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=28.4
Q ss_pred HHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 253 NATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 253 ~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
++..++..++||++++-..=+-+..+.++.+|.+|
T Consensus 198 ~~~~~eva~~ypdV~~~~~~vDa~~~~Lv~~P~~f 232 (344)
T PRK03437 198 QRTVDEVAAEYPDVTVDYQHVDAATIFMVTDPSRF 232 (344)
T ss_pred HHHHHHHHhhCCCceEeehhHHHHHHHHhcCcccC
Confidence 45566777889998887777778889999999886
No 87
>TIGR02089 TTC tartrate dehydrogenase. Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate. These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in TIGR00169 and TIGR02088, respectively.
Probab=24.05 E-value=98 Score=28.73 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 252 LNATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 252 L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
.++..++..++||++++-..=+-+..+.++.+|.+|
T Consensus 200 f~~~~~eva~~yp~v~~~~~~vD~~~~~lv~~P~~f 235 (352)
T TIGR02089 200 WDEVFAEVAAEYPDVEWDSYHIDALAARFVLKPETF 235 (352)
T ss_pred HHHHHHHHHhhCCCceEeeehHHHHHHHHhcChhhC
Confidence 345566777889998887777778899999999876
No 88
>PRK00772 3-isopropylmalate dehydrogenase; Provisional
Probab=23.24 E-value=1.3e+02 Score=27.94 Aligned_cols=38 Identities=11% Similarity=0.179 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 250 NKLNATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 250 ~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
...++..+++.++||++++-..=+-++.+.++.+|.+|
T Consensus 199 glf~~~~~eva~eyp~i~~~~~~vDa~~~~lv~~P~~f 236 (358)
T PRK00772 199 RLWREVVTEVAKEYPDVELSHMYVDNAAMQLVRNPKQF 236 (358)
T ss_pred hHHHHHHHHHHhHCCCceEEEEeHHHHHHHHhhCcccC
Confidence 34455667777889999888888888899999999886
No 89
>TIGR00109 hemH ferrochelatase. Human ferrochelatase, found at the mitochondrial inner membrane inner surface, was shown in an active recombinant form to be a homodimer. This contrasts to an earlier finding by gel filtration that overexpressed E. coli ferrochelatase runs as a monomer.
Probab=23.22 E-value=2.7e+02 Score=25.37 Aligned_cols=24 Identities=29% Similarity=0.247 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCC
Q 040658 197 FSAFVQKLYGLGVRKIGVSTLPPL 220 (287)
Q Consensus 197 i~~~i~~L~~~GAR~~vv~nlppl 220 (287)
|.+.|++|.+.|+++++++-+-|.
T Consensus 106 i~~~l~~l~~~G~~~iv~lPL~Pq 129 (322)
T TIGR00109 106 TEEAVKELLKDGVERAVVLPLYPH 129 (322)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCcc
Confidence 346788999999999999887663
No 90
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=23.15 E-value=2.2e+02 Score=23.28 Aligned_cols=33 Identities=9% Similarity=0.246 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecc
Q 040658 242 NGDAVSFNNKLNATSQSLVNKLSGLNLVVLDIY 274 (287)
Q Consensus 242 n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D~~ 274 (287)
....+.|=+.|+++++++++..|+++|+++..+
T Consensus 98 ~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~ 130 (204)
T cd04506 98 KKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLY 130 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 334567888999999999999999998887654
No 91
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type. The NADP-dependent IDH of Thermus aquaticus thermophilus strain HB8 resembles these NAD-dependent IDH, except for the residues involved in cofactor specificity, much more closely than it resembles other prokaryotic NADP-dependent IDH, including that of Thermus aquaticus strain YT1.
Probab=23.12 E-value=1.5e+02 Score=27.38 Aligned_cols=38 Identities=11% Similarity=0.220 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 250 NKLNATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 250 ~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
...++.+++..++||++++-..=+-++.+.++.+|..|
T Consensus 180 glf~~~~~eva~~yp~v~~~~~~vDa~~~~lv~~P~~f 217 (333)
T TIGR00175 180 GLFLNVCREVAKEYPDITFESMIVDNTCMQLVSRPSQF 217 (333)
T ss_pred HHHHHHHHHHHHHCCCCeeeeeeHHHHHHHHhcCcccc
Confidence 33455666677789998888888888899999999876
No 92
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=23.08 E-value=1.7e+02 Score=26.42 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=13.6
Q ss_pred CceEEEEcccchhHHhhh
Q 040658 158 GGLCLVSSGSSDFIQNYY 175 (287)
Q Consensus 158 ~sL~~i~iG~ND~~~~~~ 175 (287)
+-.=+++||.||.....+
T Consensus 196 ~~~DF~SIGtNDLtQy~l 213 (293)
T PF02896_consen 196 KEVDFFSIGTNDLTQYTL 213 (293)
T ss_dssp TTSSEEEEEHHHHHHHHH
T ss_pred HHCCEEEEChhHHHHHHh
Confidence 446678999999987444
No 93
>PRK00035 hemH ferrochelatase; Reviewed
Probab=23.02 E-value=1.7e+02 Score=26.57 Aligned_cols=45 Identities=13% Similarity=0.285 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHH
Q 040658 196 SFSAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNA 254 (287)
Q Consensus 196 ~i~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~ 254 (287)
.+.+.+++|.+.|.|+++|+- |.+.. .|.+.+.++...+-+.+.+
T Consensus 249 ~~~~~l~~l~~~g~k~V~v~P-------~~Fv~-------D~lEtl~ei~~e~~~~~~~ 293 (333)
T PRK00035 249 YTDDTLEELAEKGVKKVVVVP-------PGFVS-------DHLETLEEIDIEYREIAEE 293 (333)
T ss_pred CHHHHHHHHHHcCCCeEEEEC-------Ceeec-------cchhHHHHHHHHHHHHHHH
No 94
>PRK05222 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional
Probab=22.99 E-value=3e+02 Score=28.44 Aligned_cols=31 Identities=13% Similarity=0.185 Sum_probs=27.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHcCCcEEEEe
Q 040658 185 TPDQFSDILIESFSAFVQKLYGLGVRKIGVS 215 (287)
Q Consensus 185 ~~~~~v~~~v~~i~~~i~~L~~~GAR~~vv~ 215 (287)
+.+++..+++..+.+.++.|+++|+|-|=|=
T Consensus 571 ~~~e~~~dlA~al~~Ev~~L~~aG~~~IQiD 601 (758)
T PRK05222 571 PREETARQIALAIRDEVLDLEAAGIKIIQID 601 (758)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEee
Confidence 5678899999999999999999999987664
No 95
>PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc. Ferrochelatase catalyses the last step in haem biosynthesis: the chelation of a ferrous ion to proto-porphyrin IX, to form protohaem [, ]. In eukaryotic cells, it binds to the mitochondrial inner membrane with its active site on the matrix side of the membrane. The X-ray structure of Bacillus subtilis and human ferrochelatase have been solved [, ]. The human enzyme exists as a homodimer. Each subunit contains one [2Fe-2S] cluster. The monomer is folded into two similar domains, each with a four-stranded parallel beta-sheet flanked by an alpha-helix in a beta-alpha-beta motif that is reminiscent of the fold found in the periplasmic binding proteins. The topological similarity between the domains suggests that they have arisen from a gene duplication event. However, significant differences exist between the two domains, including an N-terminal section (residues 80-130) that forms part of the active site pocket, and a C-terminal extension (residues 390-423) that is involved in coordination of the [2Fe-2S] cluster and in stabilisation of the homodimer. Ferrochelatase seems to have a structurally conserved core region that is common to the enzyme from bacteria, plants and mammals. Porphyrin binds in the identified cleft; this cleft also includes the metal-binding site of the enzyme. It is likely that the structure of the cleft region will have different conformations upon substrate binding and release [].; GO: 0004325 ferrochelatase activity, 0006783 heme biosynthetic process; PDB: 2QD3_B 2HRE_C 3HCN_B 2PNJ_A 2QD1_C 1HRK_A 2QD4_B 3AQI_B 2HRC_B 3HCO_B ....
Probab=22.99 E-value=5.7e+02 Score=23.21 Aligned_cols=76 Identities=14% Similarity=0.165 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCccccccccccCCCCcchhhhhHHHH------------------HHHHHHHHHHHHHH
Q 040658 198 SAFVQKLYGLGVRKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDA------------------VSFNNKLNATSQSL 259 (287)
Q Consensus 198 ~~~i~~L~~~GAR~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~------------------~~~N~~L~~~l~~l 259 (287)
.+.+++|.+.|.++++|+-+-|.-..-.. +.+.+.+.+.. ..|.+.+.+.+.+-
T Consensus 103 ~~~l~~l~~~g~~~ivvlPLyPqyS~~tt--------gs~~~~~~~~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~i~~~ 174 (316)
T PF00762_consen 103 EDALEELKADGVDRIVVLPLYPQYSSSTT--------GSYLDEVERALKKSRPNPKVRFIPSFYDHPAYIEALAERIREA 174 (316)
T ss_dssp HHHHHHHHHTT-SEEEEEESSSS--TTTH--------HHHHHHHHHHHHHTHSSSEEEEE---TT-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEEeCCCchhHhhH--------HHHHHHHHHHHHhcCCCCeEEEeCCccCCHHHHHHHHHHHHHH
Confidence 45678888899999999988765432211 12222222211 23555555555554
Q ss_pred HhhC--CCcEEEEEecchHHHHHh
Q 040658 260 VNKL--SGLNLVVLDIYQPLYDLV 281 (287)
Q Consensus 260 ~~~~--pg~~i~~~D~~~~~~~ii 281 (287)
-+++ +.-.-+++-.+++=...+
T Consensus 175 l~~~~~~~~~~llfSaHglP~~~~ 198 (316)
T PF00762_consen 175 LERFPRGEPDHLLFSAHGLPQRYV 198 (316)
T ss_dssp HTTS-HCCCEEEEEEEE--BHHHH
T ss_pred HHhcCCCCCCEEEEccCCCCcccc
Confidence 4444 233666788888777776
No 96
>PRK08997 isocitrate dehydrogenase; Provisional
Probab=22.82 E-value=1.4e+02 Score=27.45 Aligned_cols=36 Identities=8% Similarity=0.167 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 252 LNATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 252 L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
.++...+..++||++.+-..=+-+..+.++.+|.+|
T Consensus 184 f~~~~~eva~~yP~V~~~~~~vDa~~~~lv~~P~~f 219 (334)
T PRK08997 184 FLKVAREVALRYPDIEFEEMIVDATCMQLVMNPEQF 219 (334)
T ss_pred HHHHHHHHHhhCCCeEEEeeeHHHHHHHHhhCcccC
Confidence 345556677789998887666667788999999986
No 97
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=22.64 E-value=36 Score=28.61 Aligned_cols=15 Identities=33% Similarity=0.437 Sum_probs=12.7
Q ss_pred cCEEEEcCCccccCC
Q 040658 27 VPAMFIFGDSVVDAG 41 (287)
Q Consensus 27 ~~~l~vFGDSlsD~G 41 (287)
.+.+++||||..|..
T Consensus 202 ~~~~~~~GD~~ND~~ 216 (254)
T PF08282_consen 202 PEDIIAFGDSENDIE 216 (254)
T ss_dssp GGGEEEEESSGGGHH
T ss_pred cceeEEeecccccHh
Confidence 478999999999963
No 98
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=22.63 E-value=1.7e+02 Score=21.09 Aligned_cols=39 Identities=13% Similarity=0.114 Sum_probs=24.1
Q ss_pred chhHHHHHHHHHHHHHHHhC-CCCcCEEEEcCCccccCCC
Q 040658 4 SNSLLATFLFLCLELYVING-QPLVPAMFIFGDSVVDAGN 42 (287)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~vFGDSlsD~Gn 42 (287)
|..|++.+|.+.|++..|+. |..-.++-+=--|.+-+|.
T Consensus 3 RRlwiLslLAVtLtVALAAPsQKsKRSVtveqPsts~n~d 42 (100)
T PF05984_consen 3 RRLWILSLLAVTLTVALAAPSQKSKRSVTVEQPSTSTNGD 42 (100)
T ss_pred hhhHHHHHHHHHHHHHhhccccccccceeecCCccccCCC
Confidence 44677888888888887776 4433444444445555554
No 99
>PLN00118 isocitrate dehydrogenase (NAD+)
Probab=22.37 E-value=1.3e+02 Score=28.10 Aligned_cols=38 Identities=13% Similarity=0.036 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 250 NKLNATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 250 ~~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
...++.+++..++||++++-..=+-+..+.++.+|.+|
T Consensus 219 glf~e~~~eva~eyPdI~~~~~~VDa~a~~Lv~~P~~f 256 (372)
T PLN00118 219 GLFLKCCREVAEKYPEIVYEEVIIDNCCMMLVKNPALF 256 (372)
T ss_pred HHHHHHHHHHHhhCCCceEEeeeHHHHHHHhccCcccC
Confidence 34455667777889998887777778889999999876
No 100
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=22.13 E-value=1.9e+02 Score=21.38 Aligned_cols=25 Identities=16% Similarity=0.267 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhCCCcEEEEEecchH
Q 040658 252 LNATSQSLVNKLSGLNLVVLDIYQP 276 (287)
Q Consensus 252 L~~~l~~l~~~~pg~~i~~~D~~~~ 276 (287)
+...++++.+++++.+++.+|....
T Consensus 42 l~~~l~~la~~~~~v~f~~vd~~~~ 66 (113)
T cd02957 42 LDSHLEELAAKYPETKFVKINAEKA 66 (113)
T ss_pred HHHHHHHHHHHCCCcEEEEEEchhh
Confidence 4566677777888999999999864
No 101
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=21.70 E-value=1.4e+02 Score=22.29 Aligned_cols=26 Identities=8% Similarity=0.111 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhhCCCcEEEEEecchH
Q 040658 251 KLNATSQSLVNKLSGLNLVVLDIYQP 276 (287)
Q Consensus 251 ~L~~~l~~l~~~~pg~~i~~~D~~~~ 276 (287)
.+...+++|.+++|+.+++.+|....
T Consensus 39 ~~~p~l~~la~~~~~i~f~~Vd~~~~ 64 (113)
T cd02989 39 IMDKHLEILAKKHLETKFIKVNAEKA 64 (113)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEcccC
Confidence 34556677777789999999998874
No 102
>TIGR00169 leuB 3-isopropylmalate dehydrogenase. This model will not find all isopropylmalate dehydrogenases; the enzyme from Sulfolobus sp. strain 7 is more similar to mitochondrial NAD-dependent isocitrate dehydrogenases than to other known isopropylmalate dehydrogenases and was omitted to improve the specificity of the model. It scores below the cutoff and below some enzymes known not to be isopropylmalate dehydrogenase.
Probab=21.23 E-value=1.6e+02 Score=27.37 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 251 KLNATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 251 ~L~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
..++..++..++||++++-..=+-+....++.+|.+|
T Consensus 197 lf~~~~~eva~~yP~I~~~~~~vDa~~~~Lv~~P~~f 233 (349)
T TIGR00169 197 LWRKTVEEIAKEYPDVELEHQYIDNAAMQLVKSPTQF 233 (349)
T ss_pred HHHHHHHHHHhhCCCceEEeeeHHHHHHHHHhCccCc
Confidence 3455666777889998888877788889999999876
No 103
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=21.08 E-value=2.9e+02 Score=23.29 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHcCC--cEEEEeCCCCCccccccccccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 040658 196 SFSAFVQKLYGLGV--RKIGVSTLPPLGCLPATITVFGSDSNECVDKINGDAVSFNNKLNATSQSLVNKLSGLNLVVLD 272 (287)
Q Consensus 196 ~i~~~i~~L~~~GA--R~~vv~nlpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~pg~~i~~~D 272 (287)
++..+|+.|.+.|+ ++|+++++- .| .+.++++.++||+++|+..-
T Consensus 136 s~~~ai~~L~~~G~~~~~I~~v~~i-----------------as---------------~~Gl~~l~~~~P~v~I~ta~ 182 (207)
T PF14681_consen 136 SAIAAIEILKEHGVPEENIIIVSVI-----------------AS---------------PEGLERLLKAFPDVRIYTAA 182 (207)
T ss_dssp HHHHHHHHHHHTTG-GGEEEEEEEE-----------------EE---------------HHHHHHHHHHSTTSEEEEEE
T ss_pred hHHHHHHHHHHcCCCcceEEEEEEE-----------------ec---------------HHHHHHHHHhCCCeEEEEEE
Confidence 45577888988887 799888741 01 35677788889999988763
No 104
>PRK08194 tartrate dehydrogenase; Provisional
Probab=20.63 E-value=1.1e+02 Score=28.42 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=28.4
Q ss_pred HHHHHHHHhhCCCcEEEEEecchHHHHHhhCCCCC
Q 040658 253 NATSQSLVNKLSGLNLVVLDIYQPLYDLVTKPSEN 287 (287)
Q Consensus 253 ~~~l~~l~~~~pg~~i~~~D~~~~~~~ii~nP~~Y 287 (287)
++.+.+..++||++.+-..-+-+..+.++.||.+|
T Consensus 198 ~~~~~eva~~yp~V~~~~~~vDa~~~~Lv~~P~~f 232 (352)
T PRK08194 198 DEVFQEVGKDYPEIETDSQHIDALAAFFVTRPEEF 232 (352)
T ss_pred HHHHHHHHhhCCCceeeehhHHHHHHHHhhChhhC
Confidence 45556677889998888777778889999999876
No 105
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=20.09 E-value=6.2e+02 Score=22.45 Aligned_cols=63 Identities=13% Similarity=0.147 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhcccCceEEEEcccchhHHhhhcCCcccccCChhhHHHHHHHHHHHHHHHHHHcCCc
Q 040658 131 QQLEHFKDYQRKLEGIAGKTNASSIISGGLCLVSSGSSDFIQNYYINPLLYKVYTPDQFSDILIESFSAFVQKLYGLGVR 210 (287)
Q Consensus 131 ~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR 210 (287)
.++++|++..+-+. .+.+..++|.+|++=... +.+...+.+.|..|...|.+
T Consensus 6 ~~~~~~~~~~pyi~----------~~~~~~~VIk~gG~~~~~------------------~~l~~~~~~di~~l~~~g~~ 57 (284)
T CHL00202 6 ERVQVLSEALPYIQ----------KFRGRIMVIKYGGAAMKN------------------LILKADIIKDILFLSCIGLK 57 (284)
T ss_pred HHHHHHHHHHHHHH----------HHcCCeEEEEEChHHhcC------------------cchHHHHHHHHHHHHHCCCc
Confidence 56777776554332 235678999999865311 11333455777889999999
Q ss_pred EEEEeCCCCCc
Q 040658 211 KIGVSTLPPLG 221 (287)
Q Consensus 211 ~~vv~nlpplG 221 (287)
=++|.+-+|.+
T Consensus 58 ~VlVHGgg~~i 68 (284)
T CHL00202 58 IVVVHGGGPEI 68 (284)
T ss_pred EEEEeCCcHHH
Confidence 99999988743
No 106
>PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases. Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A ....
Probab=20.04 E-value=1.2e+02 Score=27.47 Aligned_cols=25 Identities=32% Similarity=0.515 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEe
Q 040658 191 DILIESFSAFVQKLYGLGVRKIGVS 215 (287)
Q Consensus 191 ~~~v~~i~~~i~~L~~~GAR~~vv~ 215 (287)
+.-++.+..-+++|+++|+|.|.|+
T Consensus 87 ~~d~~~L~~K~~ql~~lGvr~Fail 111 (306)
T PF07555_consen 87 EEDFEALKAKFDQLYDLGVRSFAIL 111 (306)
T ss_dssp HHHHHHHHHHHHHHHCTT--EEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 3456677788899999999999776
Done!