Query 040662
Match_columns 365
No_of_seqs 207 out of 1681
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 17:04:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.2 9E-09 3.1E-13 93.7 28.0 247 61-322 7-283 (315)
2 2woz_A Kelch repeat and BTB do 99.2 1.1E-08 3.7E-13 93.3 27.5 246 61-322 18-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.2 1.7E-09 5.7E-14 98.1 20.9 245 59-323 12-279 (306)
4 2vpj_A Kelch-like protein 12; 99.2 4.4E-09 1.5E-13 95.0 22.6 234 68-322 32-284 (301)
5 2xn4_A Kelch-like protein 2; s 99.2 9E-09 3.1E-13 93.1 24.4 234 68-322 31-282 (302)
6 1zgk_A Kelch-like ECH-associat 99.1 1.3E-08 4.4E-13 92.4 19.7 237 68-322 40-293 (308)
7 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 1.5E-10 5E-15 76.2 3.8 42 13-54 5-46 (53)
8 1zgk_A Kelch-like ECH-associat 98.9 8.9E-08 3E-12 86.8 19.3 196 69-279 92-297 (308)
9 4asc_A Kelch repeat and BTB do 98.9 8.7E-08 3E-12 87.2 19.1 196 69-276 69-284 (315)
10 3ii7_A Kelch-like protein 7; p 98.9 1.5E-07 5.1E-12 85.1 20.4 197 69-279 72-282 (306)
11 2vpj_A Kelch-like protein 12; 98.9 2E-07 7E-12 84.0 19.2 197 68-279 79-288 (301)
12 2xn4_A Kelch-like protein 2; s 98.8 2.9E-07 9.8E-12 83.1 19.4 196 69-279 79-287 (302)
13 2woz_A Kelch repeat and BTB do 98.8 4E-07 1.4E-11 82.9 19.0 194 69-275 80-293 (318)
14 2uvk_A YJHT; unknown function, 98.7 4.3E-06 1.5E-10 77.1 23.5 237 68-320 32-346 (357)
15 2uvk_A YJHT; unknown function, 98.7 3.3E-06 1.1E-10 77.9 21.0 205 100-323 17-301 (357)
16 2e31_A FBS1, F-box only protei 98.7 1.1E-08 3.7E-13 91.3 3.8 43 12-54 46-89 (297)
17 2ovr_B FBW7, F-BOX/WD repeat p 98.3 0.0015 5E-08 61.6 30.8 40 15-54 17-56 (445)
18 2zwa_A Leucine carboxyl methyl 98.3 4.2E-05 1.5E-09 77.2 18.7 198 69-276 414-642 (695)
19 1p22_A F-BOX/WD-repeat protein 98.1 0.00042 1.4E-08 65.3 21.6 37 18-54 12-52 (435)
20 3v7d_B Cell division control p 98.1 0.0023 7.8E-08 60.5 25.5 37 17-53 15-51 (464)
21 2zwa_A Leucine carboxyl methyl 98.0 0.00019 6.3E-09 72.5 16.7 207 101-321 396-640 (695)
22 2ast_B S-phase kinase-associat 97.8 1.3E-05 4.6E-10 73.1 3.7 43 12-54 4-46 (336)
23 1k3i_A Galactose oxidase precu 97.7 0.00022 7.4E-09 71.5 11.1 231 69-322 221-503 (656)
24 3l2o_B F-box only protein 4; s 97.5 1.8E-05 6.3E-10 69.8 0.9 39 16-54 4-42 (312)
25 1k3i_A Galactose oxidase precu 97.5 0.00073 2.5E-08 67.6 11.8 190 70-274 169-383 (656)
26 2p1m_B Transport inhibitor res 97.4 6.8E-05 2.3E-09 73.9 2.9 40 12-51 1-41 (594)
27 3ogk_B Coronatine-insensitive 96.4 0.0012 4.3E-08 64.8 2.5 35 18-52 14-49 (592)
28 3hfq_A Uncharacterized protein 83.7 22 0.00074 31.1 14.9 94 171-267 18-117 (347)
29 2ojh_A Uncharacterized protein 81.2 23 0.00077 29.5 18.4 143 120-278 21-171 (297)
30 2z2n_A Virginiamycin B lyase; 79.0 28 0.00095 29.3 20.2 130 100-252 149-283 (299)
31 3dsm_A Uncharacterized protein 75.4 41 0.0014 29.4 20.5 185 101-319 52-256 (328)
32 3jrp_A Fusion protein of prote 72.8 47 0.0016 28.8 15.0 51 171-223 79-135 (379)
33 3dsm_A Uncharacterized protein 70.9 41 0.0014 29.4 11.4 137 170-319 16-164 (328)
34 1ri6_A Putative isomerase YBHE 70.5 50 0.0017 28.2 16.1 147 121-278 151-319 (343)
35 3jro_A Fusion protein of prote 66.9 95 0.0033 30.8 14.2 51 171-223 77-133 (753)
36 1l0q_A Surface layer protein; 64.1 75 0.0026 27.9 21.3 93 120-224 11-107 (391)
37 3sjl_D Methylamine dehydrogena 61.6 62 0.0021 29.5 10.6 116 198-320 231-367 (386)
38 2z2n_A Virginiamycin B lyase; 60.9 72 0.0025 26.6 16.9 105 101-224 192-297 (299)
39 1qks_A Cytochrome CD1 nitrite 60.6 1.2E+02 0.0041 29.1 20.1 190 102-320 166-377 (567)
40 3hfq_A Uncharacterized protein 58.6 90 0.0031 26.9 18.0 159 100-276 149-326 (347)
41 1npe_A Nidogen, entactin; glyc 58.6 79 0.0027 26.3 20.6 190 99-319 44-241 (267)
42 3v65_B Low-density lipoprotein 58.3 1E+02 0.0036 27.6 21.1 201 39-269 63-277 (386)
43 1q7f_A NHL, brain tumor CG1071 57.9 82 0.0028 26.3 19.4 148 100-267 129-280 (286)
44 4aez_A CDC20, WD repeat-contai 57.7 1E+02 0.0035 27.4 15.7 91 121-222 113-205 (401)
45 2p4o_A Hypothetical protein; p 55.3 95 0.0033 26.6 10.6 77 195-279 34-114 (306)
46 3scy_A Hypothetical bacterial 54.8 1.1E+02 0.0036 26.6 18.5 102 171-276 233-346 (361)
47 1ri6_A Putative isomerase YBHE 54.4 1E+02 0.0034 26.2 13.6 91 171-266 15-114 (343)
48 3vgz_A Uncharacterized protein 53.8 1.1E+02 0.0036 26.3 27.2 218 69-319 71-306 (353)
49 3u4y_A Uncharacterized protein 53.7 1E+02 0.0035 26.2 21.7 143 100-268 7-161 (331)
50 3q7m_A Lipoprotein YFGL, BAMB; 53.1 1.2E+02 0.004 26.6 17.7 103 100-227 101-214 (376)
51 1n7d_A LDL receptor, low-densi 50.0 2E+02 0.0068 28.4 15.3 191 98-319 413-617 (699)
52 1l0q_A Surface layer protein; 47.5 1.4E+02 0.0049 26.0 24.2 131 67-224 12-149 (391)
53 4gga_A P55CDC, cell division c 44.3 1.7E+02 0.0059 26.0 17.5 103 100-223 114-219 (420)
54 2xbg_A YCF48-like protein; pho 44.1 1.3E+02 0.0045 26.1 9.7 96 175-277 58-159 (327)
55 3azo_A Aminopeptidase; POP fam 42.6 2.3E+02 0.0079 27.0 19.6 185 121-321 161-374 (662)
56 3scy_A Hypothetical bacterial 42.5 1.7E+02 0.0057 25.3 22.7 119 195-320 213-343 (361)
57 2qc5_A Streptogramin B lactona 41.8 1.5E+02 0.005 24.5 19.2 166 69-267 85-258 (300)
58 3v64_C Agrin; beta propeller, 39.6 2E+02 0.0067 25.3 22.8 201 39-269 20-234 (349)
59 2qc5_A Streptogramin B lactona 35.5 1.9E+02 0.0064 23.8 21.8 149 100-274 28-180 (300)
60 3c5m_A Oligogalacturonate lyas 35.2 2.2E+02 0.0075 24.6 14.4 181 117-315 164-381 (396)
61 3hrp_A Uncharacterized protein 34.9 2.5E+02 0.0087 25.2 19.3 198 101-321 140-359 (409)
62 3s94_A LRP-6, low-density lipo 34.4 3.3E+02 0.011 26.3 20.2 184 56-269 7-202 (619)
63 1kb0_A Quinohemoprotein alcoho 34.1 1.6E+02 0.0055 28.9 9.3 30 196-227 71-103 (677)
64 2ojh_A Uncharacterized protein 33.2 1.9E+02 0.0067 23.4 24.1 183 121-320 62-262 (297)
65 3sov_A LRP-6, low-density lipo 33.0 2.4E+02 0.0083 24.4 18.8 146 100-269 44-197 (318)
66 1ms9_A Trans-sialidase; trans- 32.5 86 0.0029 30.8 6.8 56 221-277 227-282 (648)
67 3mkq_A Coatomer beta'-subunit; 31.9 3.7E+02 0.013 26.2 19.2 194 98-318 21-219 (814)
68 3sre_A PON1, serum paraoxonase 30.7 2.1E+02 0.0073 25.5 8.8 35 245-279 124-160 (355)
69 2dg1_A DRP35, lactonase; beta 30.6 2.5E+02 0.0084 23.8 13.8 101 171-275 66-177 (333)
70 2biw_A Apocarotenoid-cleaving 30.2 3.1E+02 0.011 25.7 10.2 73 195-269 135-221 (490)
71 2hqs_A Protein TOLB; TOLB, PAL 29.7 3E+02 0.01 24.6 24.4 180 121-320 203-391 (415)
72 3q7m_A Lipoprotein YFGL, BAMB; 29.2 2.8E+02 0.0097 24.0 14.2 97 102-224 239-339 (376)
73 2hqs_A Protein TOLB; TOLB, PAL 28.7 3.2E+02 0.011 24.4 22.9 149 121-283 247-401 (415)
74 3b7f_A Glycosyl hydrolase, BNR 28.1 3.1E+02 0.011 24.2 13.1 99 172-277 32-155 (394)
75 2ad6_A Methanol dehydrogenase 28.0 2.9E+02 0.0098 26.4 9.8 30 196-227 56-90 (571)
76 3sil_A Sialidase; glycosidase, 27.5 62 0.0021 29.4 4.6 60 218-279 208-267 (379)
77 2iwa_A Glutamine cyclotransfer 27.5 2.9E+02 0.0097 23.5 11.9 130 69-224 46-183 (266)
78 1kv9_A Type II quinohemoprotei 27.4 1.7E+02 0.0059 28.6 8.2 29 197-227 61-92 (668)
79 4ggc_A P55CDC, cell division c 27.2 2.6E+02 0.009 23.0 16.4 65 100-182 34-100 (318)
80 3g4e_A Regucalcin; six bladed 26.7 2.8E+02 0.0097 23.2 16.9 92 171-268 35-138 (297)
81 3lrv_A PRE-mRNA-splicing facto 25.3 3.2E+02 0.011 23.3 13.5 155 102-274 139-299 (343)
82 3v65_B Low-density lipoprotein 24.8 3.7E+02 0.013 23.9 17.4 141 102-269 87-234 (386)
83 2z3z_A Dipeptidyl aminopeptida 24.8 4.7E+02 0.016 25.1 26.7 150 120-276 234-398 (706)
84 2xbg_A YCF48-like protein; pho 23.4 2E+02 0.0069 24.8 7.2 90 180-277 193-287 (327)
85 3mbr_X Glutamine cyclotransfer 22.8 3.4E+02 0.012 22.7 12.9 129 69-224 45-181 (243)
86 1rwi_B Serine/threonine-protei 22.7 3E+02 0.01 22.1 17.7 104 101-224 76-182 (270)
87 1npe_A Nidogen, entactin; glyc 21.6 3.3E+02 0.011 22.2 17.3 51 171-224 58-112 (267)
88 3azo_A Aminopeptidase; POP fam 21.1 5.3E+02 0.018 24.4 16.8 144 121-276 217-376 (662)
89 3bws_A Protein LP49; two-domai 20.6 4.3E+02 0.015 23.1 22.7 191 102-319 133-337 (433)
90 2kwv_A RAD30 homolog B, DNA po 20.3 38 0.0013 20.4 1.1 17 16-32 20-36 (48)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.25 E-value=9e-09 Score=93.74 Aligned_cols=247 Identities=13% Similarity=0.079 Sum_probs=149.8
Q ss_pred EEEeeCCceEEEcCCCCceEEEecCCCCCCCCCCCeEEEccCCeEEEeccccc---cCCCCccccEEEEcCCCCCeeeCC
Q 040662 61 LMGYNSHSCYLYDPCHKQKYTVFNSDKNRTTLLGARPLDSKHGWVLFEGEKNV---NSGGRKCSPLFFYSPFADQIINLP 137 (365)
Q Consensus 61 ll~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~---~~~~~~~~~~~l~NP~T~~~~~LP 137 (365)
++++.......|||.+++|...++.. |..+........+|-|++...... .........++.+||.|++|..+|
T Consensus 7 l~~~GG~~~~~yd~~~~~W~~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISEEGAVAYDPAANECYCASLSS---QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEETTEEEEEETTTTEEEEEECCC---CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcCCceEEECCCCCeEecCCCCC---CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 44444455678999999998755521 212222223345777776655210 001111235889999999999998
Q ss_pred CCcccceeEEEEecCCCCCCeEEEEEe----CCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCCC
Q 040662 138 AWREFSIAKATFSATPISPDCVVFVTW----VGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSLE 213 (365)
Q Consensus 138 ~~~~~~~~~~~ls~~p~s~~~~v~v~~----~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~~ 213 (365)
+++..+....+... ++.+.++.. .+......+..|++.+++|+.++..........++.++|++|+ +.-.
T Consensus 84 ~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~ 157 (315)
T 4asc_A 84 PLPSPRCLFGLGEA----LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYV--IGGK 157 (315)
T ss_dssp CBSSCEESCEEEEE----TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE--ECCB
T ss_pred CCCcchhceeEEEE----CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEE--EeCC
Confidence 87433321111111 233333321 1122446789999999999998743222344567789999999 7531
Q ss_pred -------cEEE-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCCC-ceEEEEeeCCCCCeEEeccCCCeEEE
Q 040662 214 -------AIVA-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDGS-GYRVFTFNRSQMDWFEIESLDDRVLF 284 (365)
Q Consensus 214 -------g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~~-~~~V~~ld~~~~~W~~v~~lg~~~lf 284 (365)
..+. ||+.+.+|+.++..| ........+..+|+|+++....... .-.+|.+|.++.+|.++..++..-.
T Consensus 158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~- 235 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFEWKELAPMQ-TARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS- 235 (315)
T ss_dssp CTTSCBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB-
T ss_pred CCCCcccceEEEEeCCCCeEEECCCCC-CchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc-
Confidence 3467 999999999876322 2223334556699999998775332 3468999999999999987652100
Q ss_pred eccCCCCCCCCCCeEEEeeeCC--------------CceEEEEcCceeeeec
Q 040662 285 TGASCLWVPVEKGSAFANTVHW--------------FGRYSYIRDVCREFIR 322 (365)
Q Consensus 285 vg~~~~~~~~~~n~IYf~~~~~--------------~~~~vy~l~~~~~~~~ 322 (365)
+ ......+|.||+..... ....+||++++++...
T Consensus 236 -~---~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 236 -S---LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -S---CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -c---eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 0 00012467888765311 1135899999998866
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.23 E-value=1.1e-08 Score=93.34 Aligned_cols=246 Identities=16% Similarity=0.159 Sum_probs=148.8
Q ss_pred EEEeeCCceEEEcCCCCceEEEecCCCCCCCCCCCeEEEccCCeEEEeccccccCCC---CccccEEEEcCCCCCeeeCC
Q 040662 61 LMGYNSHSCYLYDPCHKQKYTVFNSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGG---RKCSPLFFYSPFADQIINLP 137 (365)
Q Consensus 61 ll~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~---~~~~~~~l~NP~T~~~~~LP 137 (365)
++++.......|||.+++|...++.. |..+....+...+|-|++.........+ .....++++||.|++|..+|
T Consensus 18 i~~~GG~~~~~yd~~~~~W~~~~~~~---~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDTAAVAYDPMENECYLTALAE---QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSSEEEEEETTTTEEEEEEECT---TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhccccceEEECCCCCceecccCCc---cCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 44444445678999999998866521 2222223334557777776652100000 01234889999999999998
Q ss_pred CCcccce-eEEEEecCCCCCCeEEEEEeC---CCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC-
Q 040662 138 AWREFSI-AKATFSATPISPDCVVFVTWV---GIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL- 212 (365)
Q Consensus 138 ~~~~~~~-~~~~ls~~p~s~~~~v~v~~~---~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~- 212 (365)
+++.... ..++. . ++.+.++... +......+..|++.+++|+.++..........++.++|++|+ +.-
T Consensus 95 ~~p~~r~~~~~~~-~----~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~ 167 (318)
T 2woz_A 95 PLPSARCLFGLGE-V----DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYC--LGGK 167 (318)
T ss_dssp CBSSCBCSCEEEE-E----TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEE--ECCE
T ss_pred CCCccccccceEE-E----CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEE--EcCC
Confidence 8743322 12211 1 2344443321 122346789999999999998742222234566779999999 753
Q ss_pred ------CcEEE-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC-CceEEEEeeCCCCCeEEeccCCCeEEE
Q 040662 213 ------EAIVA-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG-SGYRVFTFNRSQMDWFEIESLDDRVLF 284 (365)
Q Consensus 213 ------~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~-~~~~V~~ld~~~~~W~~v~~lg~~~lf 284 (365)
...+. ||+.+.+|+.++..+. .......+..+|+|+++...... ..-.||.+|.++.+|.++..++..-
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-- 244 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMKT-PRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER-- 244 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC--
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCCC-CcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc--
Confidence 12467 9999999998763322 12223345679999999876532 2346889999999999998776310
Q ss_pred eccCCCCCCCCCCeEEEeeeC--------------CCceEEEEcCceeeeec
Q 040662 285 TGASCLWVPVEKGSAFANTVH--------------WFGRYSYIRDVCREFIR 322 (365)
Q Consensus 285 vg~~~~~~~~~~n~IYf~~~~--------------~~~~~vy~l~~~~~~~~ 322 (365)
........+|.||+.... .....+||+++++|...
T Consensus 245 ---~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 245 ---SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ---BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ---cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 000001246677776421 12246899999998855
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.21 E-value=1.7e-09 Score=98.11 Aligned_cols=245 Identities=10% Similarity=-0.016 Sum_probs=152.2
Q ss_pred ceEEEeeC----CceEEEcCCCCceEEEecCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCee
Q 040662 59 PWLMGYNS----HSCYLYDPCHKQKYTVFNSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII 134 (365)
Q Consensus 59 P~ll~~~~----~~~~~~~~~~~~~~~~~l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~ 134 (365)
..++++.. ..+..||+.+++|..+.-. |..+........+|.|++..... ......+.++||.|++|.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~lyv~GG~~----~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCP----FEKRRDAACVFWDNVVYILGGSQ----LFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCC----SCCCBSCEEEEETTEEEEECCBS----SSBCCEEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCC----CcccceeEEEEECCEEEEEeCCC----CCCcceEEEEeCCCCeEE
Confidence 45655543 3568899999999987521 43222222334577777776541 122467999999999999
Q ss_pred eCCCCcccceeEEEEecCCCCCCeEEEEEeC--CCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC
Q 040662 135 NLPAWREFSIAKATFSATPISPDCVVFVTWV--GIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL 212 (365)
Q Consensus 135 ~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~--~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~ 212 (365)
.+|+++.......+... ++.++++... +......+..|++.+++|+.++..........++.++|++|+ +.-
T Consensus 84 ~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG 157 (306)
T 3ii7_A 84 SKLGPPTPRDSLAACAA----EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYV--CGG 157 (306)
T ss_dssp EEECCSSCCBSCEEEEE----TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE--ECC
T ss_pred ECCCCCccccceeEEEE----CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEE--ECC
Confidence 88776433221111111 2333333221 112346789999999999998743222234566788999999 753
Q ss_pred ----------CcEEE-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC-CceEEEEeeCCCCCeEEeccCCC
Q 040662 213 ----------EAIVA-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG-SGYRVFTFNRSQMDWFEIESLDD 280 (365)
Q Consensus 213 ----------~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~-~~~~V~~ld~~~~~W~~v~~lg~ 280 (365)
...+. ||+.+++|+.++.. +.......++..+|+|+++...... ..-.||.+|.++.+|.++..++.
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 236 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATETWTELCPM-IEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW 236 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTEEEEECCC-SSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC
T ss_pred CCCCCCcccccceEEEeCCCCCeEEECCCc-cchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC
Confidence 23366 99999999988632 2222334456668999998765422 22458888989999999987763
Q ss_pred eEEEeccCCCCCCCCCCeEEEeeeC-----CCceEEEEcCceeeeecc
Q 040662 281 RVLFTGASCLWVPVEKGSAFANTVH-----WFGRYSYIRDVCREFIRK 323 (365)
Q Consensus 281 ~~lfvg~~~~~~~~~~n~IYf~~~~-----~~~~~vy~l~~~~~~~~~ 323 (365)
.. ........+|.||+.... .....+||++++++....
T Consensus 237 ~r-----~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 237 KG-----VTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp CB-----SCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred Cc-----cceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 10 000011347888887642 122369999999988653
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.19 E-value=4.4e-09 Score=95.01 Aligned_cols=234 Identities=16% Similarity=0.070 Sum_probs=146.2
Q ss_pred ceEEEcCCCCceEEEe-cCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCC---eeeCCCCcccc
Q 040662 68 SCYLYDPCHKQKYTVF-NSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQ---IINLPAWREFS 143 (365)
Q Consensus 68 ~~~~~~~~~~~~~~~~-l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~---~~~LP~~~~~~ 143 (365)
....||+.+++|..++ + |..+........+|-|++..... .......++++||.|++ |..+|+++...
T Consensus 32 ~~~~~d~~~~~W~~~~~~-----p~~r~~~~~~~~~~~l~v~GG~~---~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r 103 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSI-----TRKRRYVASVSLHDRIYVIGGYD---GRSRLSSVECLDYTADEDGVWYSVAPMNVRR 103 (301)
T ss_dssp CEEEEETTTTEEEECCCC-----SSCCBSCEEEEETTEEEEECCBC---SSCBCCCEEEEETTCCTTCCCEEECCCSSCC
T ss_pred EEEEEcCCCCeEEeCCCC-----ChhhccccEEEECCEEEEEcCCC---CCccCceEEEEECCCCCCCeeEECCCCCCCc
Confidence 3478999999999875 3 43222222334577777765542 11124679999999999 99988774332
Q ss_pred e-eEEEEecCCCCCCeEEEEEeC-CCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC------CcE
Q 040662 144 I-AKATFSATPISPDCVVFVTWV-GIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL------EAI 215 (365)
Q Consensus 144 ~-~~~~ls~~p~s~~~~v~v~~~-~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~------~g~ 215 (365)
. ..++. . ++.++++... +......++.|++.+++|+.++..........++.++|++|+ +.- ...
T Consensus 104 ~~~~~~~-~----~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~~~~~~~~~ 176 (301)
T 2vpj_A 104 GLAGATT-L----GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYC--LGGYDGLNILNS 176 (301)
T ss_dssp BSCEEEE-E----TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEE--ECCBCSSCBCCC
T ss_pred cceeEEE-E----CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEE--ECCCCCCcccce
Confidence 2 22221 1 2333333221 111345789999999999998753222334567778999999 752 234
Q ss_pred EE-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCCC-ceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCCC
Q 040662 216 VA-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDGS-GYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWVP 293 (365)
Q Consensus 216 i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~~-~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~ 293 (365)
+. ||+.+.+|+.++..+. ......++..+|+|+++....... .-.||.+|.++.+|.++..++.... + ....
T Consensus 177 ~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~--~---~~~~ 250 (301)
T 2vpj_A 177 VEKYDPHTGHWTNVTPMAT-KRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRC--Y---VGAT 250 (301)
T ss_dssp EEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB--S---CEEE
T ss_pred EEEEeCCCCcEEeCCCCCc-ccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCccc--c---eeEE
Confidence 66 9999999998763322 123334556789999987654222 3468889989999999987763110 0 0011
Q ss_pred CCCCeEEEeeeCC-----CceEEEEcCceeeeec
Q 040662 294 VEKGSAFANTVHW-----FGRYSYIRDVCREFIR 322 (365)
Q Consensus 294 ~~~n~IYf~~~~~-----~~~~vy~l~~~~~~~~ 322 (365)
..+|.||+..... ....+||++++++...
T Consensus 251 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 251 VLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp EETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred EECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 3577888876321 1236899999988755
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.19 E-value=9e-09 Score=93.07 Aligned_cols=234 Identities=14% Similarity=0.056 Sum_probs=147.5
Q ss_pred ceEEEcCCCCceEEEe-cCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccce-e
Q 040662 68 SCYLYDPCHKQKYTVF-NSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSI-A 145 (365)
Q Consensus 68 ~~~~~~~~~~~~~~~~-l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~-~ 145 (365)
....||+.+++|..+. + |..+........+|-|++...... ......+.++||.|++|..+|+++.... .
T Consensus 31 ~~~~~d~~~~~W~~~~~~-----p~~r~~~~~~~~~~~lyv~GG~~~---~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 102 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAEL-----PSRRCRAGMVYMAGLVFAVGGFNG---SLRVRTVDSYDPVKDQWTSVANMRDRRSTL 102 (302)
T ss_dssp CEEEEETTTTEEEEECCC-----SSCCBSCEEEEETTEEEEESCBCS---SSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred cEEEEcCcCCcEeEcccC-----CcccccceEEEECCEEEEEeCcCC---CccccceEEECCCCCceeeCCCCCccccce
Confidence 3478999999999875 3 443222223344777777765421 1124579999999999999987743322 2
Q ss_pred EEEEecCCCCCCeEEEEEe-CCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC--------CcEE
Q 040662 146 KATFSATPISPDCVVFVTW-VGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL--------EAIV 216 (365)
Q Consensus 146 ~~~ls~~p~s~~~~v~v~~-~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~--------~g~i 216 (365)
.++. . ++.++++.. .+......++.|++.+++|+.++..........++.++|++|+ +.- ...+
T Consensus 103 ~~~~-~----~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~~~~~~~~~~~~ 175 (302)
T 2xn4_A 103 GAAV-L----NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYA--VGGYDVASRQCLSTV 175 (302)
T ss_dssp EEEE-E----TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE--ECCEETTTTEECCCE
T ss_pred EEEE-E----CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEE--EeCCCCCCCccccEE
Confidence 2221 1 234444322 2222346789999999999998743222234567788999999 752 1246
Q ss_pred E-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC-CceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCCCC
Q 040662 217 A-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG-SGYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWVPV 294 (365)
Q Consensus 217 ~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~-~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~~ 294 (365)
. ||+.+++|+.++..+.. .....++..+|+|+++...... ..-.||.+|.++.+|.++..++..-. + .....
T Consensus 176 ~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~--~---~~~~~ 249 (302)
T 2xn4_A 176 ECYNATTNEWTYIAEMSTR-RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR--N---AGVCA 249 (302)
T ss_dssp EEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB--S---CEEEE
T ss_pred EEEeCCCCcEEECCCCccc-cccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc--c---CeEEE
Confidence 6 99999999987643321 2333455678999998765422 13468899999999999987763100 0 00113
Q ss_pred CCCeEEEeeeCC-----CceEEEEcCceeeeec
Q 040662 295 EKGSAFANTVHW-----FGRYSYIRDVCREFIR 322 (365)
Q Consensus 295 ~~n~IYf~~~~~-----~~~~vy~l~~~~~~~~ 322 (365)
.+|.||+..... ....+||++++++...
T Consensus 250 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 250 VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVV 282 (302)
T ss_dssp ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred ECCEEEEECCcCCCcccccEEEEcCCCCeEEEC
Confidence 577888875321 2247999999999865
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.06 E-value=1.3e-08 Score=92.42 Aligned_cols=237 Identities=12% Similarity=0.064 Sum_probs=144.5
Q ss_pred ceEEEcCCCCceEEEecCCCCCCCCCCCeEEEccCCeEEEecccccc-CCCCccccEEEEcCCCCCeeeCCCCcccce--
Q 040662 68 SCYLYDPCHKQKYTVFNSDKNRTTLLGARPLDSKHGWVLFEGEKNVN-SGGRKCSPLFFYSPFADQIINLPAWREFSI-- 144 (365)
Q Consensus 68 ~~~~~~~~~~~~~~~~l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~-~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~-- 144 (365)
....||+.+++|..+.-. |..+........+|-|++....... ........+.++||.|++|.++|+++....
T Consensus 40 ~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 115 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADL----QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI 115 (308)
T ss_dssp CEEEEETTTTEEEECCCC----SSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC
T ss_pred eEEEEcCCCCeEeECCCC----CcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc
Confidence 457899999999987521 4322222233447777776543100 000123579999999999999987743322
Q ss_pred eEEEEecCCCCCCeEEEEEe-CCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC------CcEEE
Q 040662 145 AKATFSATPISPDCVVFVTW-VGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL------EAIVA 217 (365)
Q Consensus 145 ~~~~ls~~p~s~~~~v~v~~-~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~------~g~i~ 217 (365)
..+.+ ++.++++.. .+......++.|++.+++|+.++..........++.++|++|+ +.- ...+.
T Consensus 116 ~~~~~------~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~~~~~~~~~~~ 187 (308)
T 1zgk_A 116 GVGVI------DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYA--VGGFDGTNRLNSAE 187 (308)
T ss_dssp EEEEE------TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE--ECCBCSSCBCCCEE
T ss_pred EEEEE------CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEE--EeCCCCCCcCceEE
Confidence 22222 223333211 1111235688999999999998743222334566778999999 753 13467
Q ss_pred -EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC-CceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCCCCC
Q 040662 218 -YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG-SGYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWVPVE 295 (365)
Q Consensus 218 -~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~-~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~~~ 295 (365)
||+.+++|+.++..+.. ......+..+|+|+++...... ..-.||.+|.++.+|.++..++..-. + ......
T Consensus 188 ~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~--~---~~~~~~ 261 (308)
T 1zgk_A 188 CYYPERNEWRMITAMNTI-RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS--A---LGITVH 261 (308)
T ss_dssp EEETTTTEEEECCCCSSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB--S---CEEEEE
T ss_pred EEeCCCCeEeeCCCCCCc-cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc--c---eEEEEE
Confidence 99999999987643221 2223345568999998765322 23568899989999999987763100 0 001135
Q ss_pred CCeEEEeeeC-----CCceEEEEcCceeeeec
Q 040662 296 KGSAFANTVH-----WFGRYSYIRDVCREFIR 322 (365)
Q Consensus 296 ~n~IYf~~~~-----~~~~~vy~l~~~~~~~~ 322 (365)
+|.||+.... .....+||++++++...
T Consensus 262 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 262 QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred CCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 7788887532 12236999999998854
No 7
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.03 E-value=1.5e-10 Score=76.23 Aligned_cols=42 Identities=31% Similarity=0.544 Sum_probs=36.5
Q ss_pred cCCCCCCChHHHHHHHHhcCChhhhhhhhhcchhhHHhhccC
Q 040662 13 ERGSWSDLPLEIINSIVSRLYVVYQIRFRAVCKRWRAADIQS 54 (365)
Q Consensus 13 ~~~~w~~LP~Dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~ 54 (365)
+...|..||+||+..||.+||..+++++++|||+|+.++.++
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~ 46 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE 46 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCG
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCh
Confidence 345799999999999999999999999999999999998764
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.92 E-value=8.9e-08 Score=86.83 Aligned_cols=196 Identities=12% Similarity=0.088 Sum_probs=124.8
Q ss_pred eEEEcCCCCceEEEe-cCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEE
Q 040662 69 CYLYDPCHKQKYTVF-NSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKA 147 (365)
Q Consensus 69 ~~~~~~~~~~~~~~~-l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~ 147 (365)
...||+.+++|..++ + |..+........+|-|++...... ......+.++||.|++|..+++++.......
T Consensus 92 ~~~~d~~~~~W~~~~~~-----p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 163 (308)
T 1zgk_A 92 LDCYNPMTNQWSPCAPM-----SVPRNRIGVGVIDGHIYAVGGSHG---CIHHNSVERYEPERDEWHLVAPMLTRRIGVG 163 (308)
T ss_dssp EEEEETTTTEEEECCCC-----SSCCBTCEEEEETTEEEEECCEET---TEECCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred EEEECCCCCeEeECCCC-----CcCccccEEEEECCEEEEEcCCCC---CcccccEEEECCCCCeEeECCCCCccccceE
Confidence 467899999998875 3 432222223344787777755311 1123579999999999999987743332211
Q ss_pred EEecCCCCCCeEEEEEeC-CCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC------CcEEE-EE
Q 040662 148 TFSATPISPDCVVFVTWV-GIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL------EAIVA-YN 219 (365)
Q Consensus 148 ~ls~~p~s~~~~v~v~~~-~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~------~g~i~-~d 219 (365)
+... ++.++++... +......+..|++.+++|+.++..........++.++|++|+ +.- ...+. ||
T Consensus 164 ~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~~~~~~~~~v~~yd 237 (308)
T 1zgk_A 164 VAVL----NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYA--AGGYDGQDQLNSVERYD 237 (308)
T ss_dssp EEEE----TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE--ECCBCSSSBCCCEEEEE
T ss_pred EEEE----CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEE--EeCCCCCCccceEEEEe
Confidence 1111 2333333221 111245789999999999998743222234567788999999 763 13467 99
Q ss_pred ecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC-CceEEEEeeCCCCCeEEeccCC
Q 040662 220 VASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG-SGYRVFTFNRSQMDWFEIESLD 279 (365)
Q Consensus 220 ~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~-~~~~V~~ld~~~~~W~~v~~lg 279 (365)
+.+++|+.++..+. ......++..+|+|+++...... ..-.||.+|.++++|.++..|+
T Consensus 238 ~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 238 VETETWTFVAPMKH-RRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp TTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS
T ss_pred CCCCcEEECCCCCC-CccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCC
Confidence 99999998763322 12233445568999988764322 2457899999999999998876
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.92 E-value=8.7e-08 Score=87.16 Aligned_cols=196 Identities=13% Similarity=0.137 Sum_probs=123.1
Q ss_pred eEEEcCCCCceEEEe-cCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEE
Q 040662 69 CYLYDPCHKQKYTVF-NSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKA 147 (365)
Q Consensus 69 ~~~~~~~~~~~~~~~-l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~ 147 (365)
...||+.+++|..++ + |..+........+|-|++...............+.++||.|++|..+++++.......
T Consensus 69 ~~~~d~~~~~W~~~~~~-----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 143 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPL-----PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT 143 (315)
T ss_dssp EEEEETTTTEEEECCCB-----SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred eEEecCCCCeEEECCCC-----CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee
Confidence 357899999998764 3 4322122233457777777653110112234679999999999999987743332211
Q ss_pred EEecCCCCCCeEEEEEeC--CCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC---C---cEEE-E
Q 040662 148 TFSATPISPDCVVFVTWV--GIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL---E---AIVA-Y 218 (365)
Q Consensus 148 ~ls~~p~s~~~~v~v~~~--~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~---~---g~i~-~ 218 (365)
+... ++.+.++... .......++.|++.+++|+.++..........++.++|++|+ +.- . ..+. |
T Consensus 144 ~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~~~~~~~~~~~~y 217 (315)
T 4asc_A 144 VLSH----MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIV--AAGVTDTGLTSSAEVY 217 (315)
T ss_dssp EEEE----TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE--EEEECSSSEEEEEEEE
T ss_pred EEEE----CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEE--EeccCCCCccceEEEE
Confidence 1111 2333333221 112346789999999999998743222234567788999999 742 1 2466 9
Q ss_pred EecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcC-----C-----CceEEEEeeCCCCCeEEec
Q 040662 219 NVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVD-----G-----SGYRVFTFNRSQMDWFEIE 276 (365)
Q Consensus 219 d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~-----~-----~~~~V~~ld~~~~~W~~v~ 276 (365)
|+.+++|+.++..+. ......++..+|+|+++..... . ..-.||.+|.++.+|+++.
T Consensus 218 d~~~~~W~~~~~~p~-~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 218 SITDNKWAPFEAFPQ-ERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp ETTTTEEEEECCCSS-CCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred ECCCCeEEECCCCCC-cccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 999999998864332 2233345567899999987632 1 1246999999999999983
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.91 E-value=1.5e-07 Score=85.10 Aligned_cols=197 Identities=13% Similarity=0.131 Sum_probs=125.0
Q ss_pred eEEEcCCCCceEEEe-cCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEE
Q 040662 69 CYLYDPCHKQKYTVF-NSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKA 147 (365)
Q Consensus 69 ~~~~~~~~~~~~~~~-l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~ 147 (365)
...||+.+++|..+. + |..+........+|-|++...... .......+.++||.|++|..+|+++.......
T Consensus 72 ~~~~d~~~~~W~~~~~~-----p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 144 (306)
T 3ii7_A 72 MDCYNVVKDSWYSKLGP-----PTPRDSLAACAAEGKIYTSGGSEV--GNSALYLFECYDTRTESWHTKPSMLTQRCSHG 144 (306)
T ss_dssp EEEEETTTTEEEEEECC-----SSCCBSCEEEEETTEEEEECCBBT--TBSCCCCEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred EEEEeCCCCeEEECCCC-----CccccceeEEEECCEEEEECCCCC--CCcEeeeEEEEeCCCCceEeCCCCcCCcceeE
Confidence 467999999999876 3 433222223345777777765420 11124679999999999999887743322111
Q ss_pred EEecCCCCCCeEEEEEe-CCCcC----eEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC------CcEE
Q 040662 148 TFSATPISPDCVVFVTW-VGIME----ISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL------EAIV 216 (365)
Q Consensus 148 ~ls~~p~s~~~~v~v~~-~~~~~----~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~------~g~i 216 (365)
+... ++.+.++.. ..... ...++.|++.+++|+.++..........++.++|++|+ +.- ...+
T Consensus 145 ~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v--~GG~~~~~~~~~~ 218 (306)
T 3ii7_A 145 MVEA----NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFA--VGGQNGLGGLDNV 218 (306)
T ss_dssp EEEE----TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE--ECCEETTEEBCCE
T ss_pred EEEE----CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEE--EeCCCCCCCCceE
Confidence 1111 223333211 11111 56789999999999999743222345567788999999 753 1346
Q ss_pred E-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC-CceEEEEeeCCCCCeEEeccCC
Q 040662 217 A-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG-SGYRVFTFNRSQMDWFEIESLD 279 (365)
Q Consensus 217 ~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~-~~~~V~~ld~~~~~W~~v~~lg 279 (365)
. ||+.+++|+.++..+. .......+..+|+|+++...... ..-.||.+|.++.+|.++..++
T Consensus 219 ~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 219 EYYDIKLNEWKMVSPMPW-KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR 282 (306)
T ss_dssp EEEETTTTEEEECCCCSC-CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE
T ss_pred EEeeCCCCcEEECCCCCC-CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc
Confidence 6 9999999998763332 12233445568999998865422 3347999999999999998764
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.86 E-value=2e-07 Score=83.95 Aligned_cols=197 Identities=14% Similarity=0.129 Sum_probs=124.3
Q ss_pred ceEEEcCCCCc---eEEEe-cCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccc
Q 040662 68 SCYLYDPCHKQ---KYTVF-NSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFS 143 (365)
Q Consensus 68 ~~~~~~~~~~~---~~~~~-l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~ 143 (365)
....||+.+++ |..+. + |..+........+|-|++...... ......+.++||.|++|..+|+++...
T Consensus 79 ~~~~~d~~~~~~~~W~~~~~~-----p~~r~~~~~~~~~~~lyv~GG~~~---~~~~~~~~~~d~~~~~W~~~~~~p~~r 150 (301)
T 2vpj_A 79 SVECLDYTADEDGVWYSVAPM-----NVRRGLAGATTLGDMIYVSGGFDG---SRRHTSMERYDPNIDQWSMLGDMQTAR 150 (301)
T ss_dssp CEEEEETTCCTTCCCEEECCC-----SSCCBSCEEEEETTEEEEECCBCS---SCBCCEEEEEETTTTEEEEEEECSSCC
T ss_pred eEEEEECCCCCCCeeEECCCC-----CCCccceeEEEECCEEEEEcccCC---CcccceEEEEcCCCCeEEECCCCCCCc
Confidence 35789999988 98875 3 432222223345788887765421 112357999999999999887663322
Q ss_pred eeEEEEecCCCCCCeEEEEEeC-CCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC------CcEE
Q 040662 144 IAKATFSATPISPDCVVFVTWV-GIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL------EAIV 216 (365)
Q Consensus 144 ~~~~~ls~~p~s~~~~v~v~~~-~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~------~g~i 216 (365)
....+... ++.++++... +......++.|++.+++|+.++..........++.++|++|+ +.- ...+
T Consensus 151 ~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v--~GG~~~~~~~~~v 224 (301)
T 2vpj_A 151 EGAGLVVA----SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYV--VGGFDGTAHLSSV 224 (301)
T ss_dssp BSCEEEEE----TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE--ECCBCSSSBCCCE
T ss_pred ccceEEEE----CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEE--EeCCCCCcccceE
Confidence 21111111 2333333221 111345788999999999998643222234567788999999 753 1356
Q ss_pred E-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC-CceEEEEeeCCCCCeEEeccCC
Q 040662 217 A-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG-SGYRVFTFNRSQMDWFEIESLD 279 (365)
Q Consensus 217 ~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~-~~~~V~~ld~~~~~W~~v~~lg 279 (365)
. ||+.+.+|+.++..+.. ......+..+|+|+++...... ..-.||.+|.++.+|.++..|+
T Consensus 225 ~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 225 EAYNIRTDSWTTVTSMTTP-RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG 288 (301)
T ss_dssp EEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEeCCCCcEEECCCCCCc-ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCC
Confidence 7 99999999988643321 1223345568999888764322 2257999999999999998775
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.84 E-value=2.9e-07 Score=83.05 Aligned_cols=196 Identities=13% Similarity=0.097 Sum_probs=122.9
Q ss_pred eEEEcCCCCceEEEecCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCccccee-EE
Q 040662 69 CYLYDPCHKQKYTVFNSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIA-KA 147 (365)
Q Consensus 69 ~~~~~~~~~~~~~~~l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~-~~ 147 (365)
...||+.+++|..++-. |..+........+|-|++..... .......+.++||.|++|..+++++..... .+
T Consensus 79 ~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 151 (302)
T 2xn4_A 79 VDSYDPVKDQWTSVANM----RDRRSTLGAAVLNGLLYAVGGFD---GSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGV 151 (302)
T ss_dssp EEEEETTTTEEEEECCC----SSCCBSCEEEEETTEEEEEEEEC---SSCEEEEEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred eEEECCCCCceeeCCCC----CccccceEEEEECCEEEEEcCCC---CCccCceEEEEeCCCCeEeecCCCCCcccCceE
Confidence 47899999999988621 43222222334577777775531 111235788999999999998877433221 22
Q ss_pred EEecCCCCCCeEEEEEeC-CC--cCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC------CcEEE-
Q 040662 148 TFSATPISPDCVVFVTWV-GI--MEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL------EAIVA- 217 (365)
Q Consensus 148 ~ls~~p~s~~~~v~v~~~-~~--~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~------~g~i~- 217 (365)
+. . ++.+.++... .. .....++.|++.+++|+.++..........++.++|++|+ +.- ...+.
T Consensus 152 ~~-~----~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~~~~~~~~~~~~ 224 (302)
T 2xn4_A 152 GV-V----GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYA--VGGHDGPLVRKSVEV 224 (302)
T ss_dssp EE-E----TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE--ECCBSSSSBCCCEEE
T ss_pred EE-E----CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEE--ECCCCCCcccceEEE
Confidence 11 1 2233332111 11 1245688999999999998743222234567788999999 752 13577
Q ss_pred EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC-CceEEEEeeCCCCCeEEec-cCC
Q 040662 218 YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG-SGYRVFTFNRSQMDWFEIE-SLD 279 (365)
Q Consensus 218 ~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~-~~~~V~~ld~~~~~W~~v~-~lg 279 (365)
||+.+.+|+.++..+.. .....++..+|+|+++...... ..-.|+.+|.++.+|.++. .|.
T Consensus 225 yd~~~~~W~~~~~~~~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 287 (302)
T 2xn4_A 225 YDPTTNAWRQVADMNMC-RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMS 287 (302)
T ss_dssp EETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCS
T ss_pred EeCCCCCEeeCCCCCCc-cccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccC
Confidence 99999999987643322 1223355668999988765322 2345888888899999986 564
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.79 E-value=4e-07 Score=82.86 Aligned_cols=194 Identities=12% Similarity=0.125 Sum_probs=120.8
Q ss_pred eEEEcCCCCceEEEe-cCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEE
Q 040662 69 CYLYDPCHKQKYTVF-NSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKA 147 (365)
Q Consensus 69 ~~~~~~~~~~~~~~~-l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~ 147 (365)
...||+.+++|..++ + |..+........+|-|++...... ........+.++||.|++|..+++++.......
T Consensus 80 ~~~~d~~~~~W~~~~~~-----p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 153 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPL-----PSARCLFGLGEVDDKIYVVAGKDL-QTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHN 153 (318)
T ss_dssp EEEEETTTTEEEECSCB-----SSCBCSCEEEEETTEEEEEEEEBT-TTCCEEEEEEEEETTTTEEEEECCCSSCEESCE
T ss_pred EEEEeCCCCcEEECCCC-----CccccccceEEECCEEEEEcCccC-CCCcccceEEEEeCCCCCEeECCCCCCcccccE
Confidence 356899999998874 3 432222223445777777755310 011123578999999999999877643322211
Q ss_pred EEecCCCCCCeEEEEEe--CCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEECCEEEEEecCC------CcEEE-E
Q 040662 148 TFSATPISPDCVVFVTW--VGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSL------EAIVA-Y 218 (365)
Q Consensus 148 ~ls~~p~s~~~~v~v~~--~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~------~g~i~-~ 218 (365)
+... ++.+.++.. ........+..|++.+++|+.++..........++.++|++|+ +.- ...+. |
T Consensus 154 ~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv--~GG~~~~~~~~~~~~y 227 (318)
T 2woz_A 154 VISH----NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVI--AGGVTEDGLSASVEAF 227 (318)
T ss_dssp EEEE----TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE--EEEEETTEEEEEEEEE
T ss_pred EEEE----CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEE--EcCcCCCCccceEEEE
Confidence 1111 233333221 1111345689999999999998743222234567788999999 752 13466 9
Q ss_pred EecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcC----------CCceEEEEeeCCCCCeEEe
Q 040662 219 NVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVD----------GSGYRVFTFNRSQMDWFEI 275 (365)
Q Consensus 219 d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~----------~~~~~V~~ld~~~~~W~~v 275 (365)
|+.+++|+.++..|.. .....++..+|+|+++..... ...-.||.+|.++.+|.++
T Consensus 228 d~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 228 DLKTNKWEVMTEFPQE-RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ETTTCCEEECCCCSSC-CBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ECCCCeEEECCCCCCc-ccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 9999999987643321 223345667899998875431 1135699999999999998
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.71 E-value=4.3e-06 Score=77.13 Aligned_cols=237 Identities=11% Similarity=-0.045 Sum_probs=134.2
Q ss_pred ceEEEcCCC--CceEEEe-cCCCCCC-CCCCCeEEEccCCeEEEeccccc--cCCCCccccEEEEcCCCCCeeeCCCCc-
Q 040662 68 SCYLYDPCH--KQKYTVF-NSDKNRT-TLLGARPLDSKHGWVLFEGEKNV--NSGGRKCSPLFFYSPFADQIINLPAWR- 140 (365)
Q Consensus 68 ~~~~~~~~~--~~~~~~~-l~~~~~P-~~~~~~~~~s~~G~l~~~~~~~~--~~~~~~~~~~~l~NP~T~~~~~LP~~~- 140 (365)
+...||+.. .+|..+. + | ..+........+|-|++...... .........+.++||.|++|..++++.
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~-----p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p 106 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAF-----PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAP 106 (357)
T ss_dssp CEEEEETTSSSCCEEECCCC-----TTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCS
T ss_pred eEEEEccccCCCCeeECCCC-----CCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCC
Confidence 457889874 7888775 4 5 22222223345777777655310 000112357999999999999998764
Q ss_pred ccceeEEEEecCCCCCCeEEEEEeCCCc-----------------------------------CeEEEEEEecCCCceEE
Q 040662 141 EFSIAKATFSATPISPDCVVFVTWVGIM-----------------------------------EISCISICRPGDTTWTE 185 (365)
Q Consensus 141 ~~~~~~~~ls~~p~s~~~~v~v~~~~~~-----------------------------------~~~~~~~~~~g~~~W~~ 185 (365)
.......+... ++.++++...... ....+..|++.+++|+.
T Consensus 107 ~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 182 (357)
T 2uvk_A 107 MGMAGHVTFVH----NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSY 182 (357)
T ss_dssp SCCSSEEEEEE----TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEE
T ss_pred cccccceEEEE----CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEE
Confidence 22222211112 2344333321100 13588999999999999
Q ss_pred eeeeCCccce-eeEEEECCEEEEEecCC-------CcEEE-EEe--cCCceeeeec-CCCceeceeEEEEeCCcEEEEEE
Q 040662 186 LRFQDNYRYV-KNLVCADGFLYCSFFSL-------EAIVA-YNV--ASQNLEILPY-PPSILFMYKYLTEYDGSLLIFGK 253 (365)
Q Consensus 186 ~~~~~~~~~~-~~~v~~~G~lY~~~l~~-------~g~i~-~d~--~~~~~~~i~~-p~~~~~~~~~Lve~~G~L~lV~~ 253 (365)
+......... ..++.++|++|+ +.- ...+. ||+ .+.+|+.++. |.+........+..+|+|+++..
T Consensus 183 ~~~~p~~~~~~~~~~~~~~~iyv--~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 183 AGESPWYGTAGAAVVNKGDKTWL--INGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGG 260 (357)
T ss_dssp EEECSSCCCBSCEEEEETTEEEE--ECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECC
T ss_pred CCCCCCCCcccccEEEECCEEEE--EeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcC
Confidence 8743211223 677888999999 752 22455 776 7778987753 22332233346667999999886
Q ss_pred EcCC------------------CceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCCCCCCCeEEEeeeCC-Cc-----e
Q 040662 254 VVDG------------------SGYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWVPVEKGSAFANTVHW-FG-----R 309 (365)
Q Consensus 254 ~~~~------------------~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~~~~n~IYf~~~~~-~~-----~ 309 (365)
.... ....++.+|.++.+|.++..++..-. + . ..-..+|.||+..... .+ .
T Consensus 261 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~-~--~~~~~~~~i~v~GG~~~~~~~~~~v 335 (357)
T 2uvk_A 261 AGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA--Y-G--VSLPWNNSLLIIGGETAGGKAVTDS 335 (357)
T ss_dssp EECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB--S-S--EEEEETTEEEEEEEECGGGCEEEEE
T ss_pred ccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc--c-c--eeEEeCCEEEEEeeeCCCCCEeeeE
Confidence 5311 11457888888999999987763100 0 0 0013578888876421 11 1
Q ss_pred EEEEcCceeee
Q 040662 310 YSYIRDVCREF 320 (365)
Q Consensus 310 ~vy~l~~~~~~ 320 (365)
.+|+++++++.
T Consensus 336 ~~l~~~~~~~~ 346 (357)
T 2uvk_A 336 VLITVKDNKVT 346 (357)
T ss_dssp EEEEC-CCSCE
T ss_pred EEEEEcCcEeE
Confidence 35788887765
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.66 E-value=3.3e-06 Score=77.90 Aligned_cols=205 Identities=8% Similarity=0.009 Sum_probs=119.7
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCC--CCCeeeCCCCc-ccce--eEEEEecCCCCCCeEEEEEeC----C--Cc
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPF--ADQIINLPAWR-EFSI--AKATFSATPISPDCVVFVTWV----G--IM 168 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~--T~~~~~LP~~~-~~~~--~~~~ls~~p~s~~~~v~v~~~----~--~~ 168 (365)
..+|-|++..... ...++++||. +++|..+|+++ ..+. ..+.+ ++.+.++... . ..
T Consensus 17 ~~~~~iyv~GG~~-------~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~------~~~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 17 IDNDTVYIGLGSA-------GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI------DGNLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp EETTEEEEECGGG-------TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE------TTEEEEECCEEECTTSCEE
T ss_pred EECCEEEEEeCcC-------CCeEEEEccccCCCCeeECCCCCCCcCccceEEEE------CCEEEEEcCCCCCCCccce
Confidence 3478888876542 3579999998 48999998874 2222 22222 2333332111 0 01
Q ss_pred CeEEEEEEecCCCceEEeeeeC-CccceeeEEEECCEEEEEecCCC----------------------------------
Q 040662 169 EISCISICRPGDTTWTELRFQD-NYRYVKNLVCADGFLYCSFFSLE---------------------------------- 213 (365)
Q Consensus 169 ~~~~~~~~~~g~~~W~~~~~~~-~~~~~~~~v~~~G~lY~~~l~~~---------------------------------- 213 (365)
....+..|++.+++|+.++... .......++.++|++|+ +.-.
T Consensus 84 ~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv--~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 2uvk_A 84 VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYV--TGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKA 161 (357)
T ss_dssp ECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEE--EECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCG
T ss_pred eeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEE--EeCcCCCcCcccccchhhcCCcccchhhhhhhhccccc
Confidence 2356889999999999987532 22234456669999999 7531
Q ss_pred ------cEEE-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCC--CceEEEEeeC--CCCCeEEeccCCC-e
Q 040662 214 ------AIVA-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDG--SGYRVFTFNR--SQMDWFEIESLDD-R 281 (365)
Q Consensus 214 ------g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~--~~~~V~~ld~--~~~~W~~v~~lg~-~ 281 (365)
..+. ||+.+.+|+.+...|.......-++..+|+|+++...... ..-.||.+|. ++.+|.++..+.. +
T Consensus 162 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~ 241 (357)
T 2uvk_A 162 EDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPD 241 (357)
T ss_dssp GGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTT
T ss_pred cccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCc
Confidence 3567 9999999998764332112224455678999998754321 1234555554 7889999988742 1
Q ss_pred EEEeccCCCCCCCCCCeEEEeeeCC----------------------CceEEEEcCceeeeecc
Q 040662 282 VLFTGASCLWVPVEKGSAFANTVHW----------------------FGRYSYIRDVCREFIRK 323 (365)
Q Consensus 282 ~lfvg~~~~~~~~~~n~IYf~~~~~----------------------~~~~vy~l~~~~~~~~~ 323 (365)
..+ + ......+|.||+..... ....+|+++++++....
T Consensus 242 ~~~-~---~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 242 GVA-G---GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp CCB-S---CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred ccc-c---ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 000 0 00123577888875310 12359999999888653
No 16
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.66 E-value=1.1e-08 Score=91.33 Aligned_cols=43 Identities=19% Similarity=0.321 Sum_probs=39.2
Q ss_pred ccCCCCCCChHHHHHHHHhcCChhhhh-hhhhcchhhHHhhccC
Q 040662 12 LERGSWSDLPLEIINSIVSRLYVVYQI-RFRAVCKRWRAADIQS 54 (365)
Q Consensus 12 ~~~~~w~~LP~Dll~~Il~rLp~~~l~-r~r~VCk~Wrs~~~~~ 54 (365)
|+......||+|||.+||.|||..+|+ |+|+|||+||+++.++
T Consensus 46 ~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~ 89 (297)
T 2e31_A 46 EAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGA 89 (297)
T ss_dssp -CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSH
T ss_pred ccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcCh
Confidence 445678899999999999999999999 9999999999999986
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.34 E-value=0.0015 Score=61.62 Aligned_cols=40 Identities=23% Similarity=0.256 Sum_probs=36.6
Q ss_pred CCCCCChHHHHHHHHhcCChhhhhhhhhcchhhHHhhccC
Q 040662 15 GSWSDLPLEIINSIVSRLYVVYQIRFRAVCKRWRAADIQS 54 (365)
Q Consensus 15 ~~w~~LP~Dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~ 54 (365)
...+.||+||+..||..|+..+++++..|||+|+.++.+.
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~ 56 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDN 56 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCS
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCch
Confidence 3468899999999999999999999999999999998764
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.25 E-value=4.2e-05 Score=77.20 Aligned_cols=198 Identities=8% Similarity=-0.008 Sum_probs=116.9
Q ss_pred eEEEcCCCCceEEEecCC--CCCCCCCCCeEEEcc--CCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccce
Q 040662 69 CYLYDPCHKQKYTVFNSD--KNRTTLLGARPLDSK--HGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSI 144 (365)
Q Consensus 69 ~~~~~~~~~~~~~~~l~~--~~~P~~~~~~~~~s~--~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~ 144 (365)
...||+.+++|..+.+.. ...|..+........ +|-|++..+... .+.....+.++||.|++|..+++++....
T Consensus 414 v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~--~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 414 ILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA--PHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp EEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS--TTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred EEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC--CCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 467899999999887210 001332212223334 788887765421 11124579999999999999987743333
Q ss_pred -eEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCc---cceeeEEEEC---CEEEEEecCCC----
Q 040662 145 -AKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNY---RYVKNLVCAD---GFLYCSFFSLE---- 213 (365)
Q Consensus 145 -~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~---~~~~~~v~~~---G~lY~~~l~~~---- 213 (365)
..++... ++.++++..... .. .+++|++.++.|+.+.....+ .....++.++ |++|+ +.-.
T Consensus 492 ~h~~~~~~----~~~iyv~GG~~~-~~-~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv--~GG~~~~~ 563 (695)
T 2zwa_A 492 RHSACSLP----DGNVLILGGVTE-GP-AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII--LGGGFMDQ 563 (695)
T ss_dssp SCEEEECT----TSCEEEECCBCS-SC-SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE--ECCBCTTS
T ss_pred cceEEEEc----CCEEEEECCCCC-CC-CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE--ECCcCCCC
Confidence 2222211 233333322111 12 789999999999998742111 1233445555 89999 7531
Q ss_pred ----cEEE-EEecCCc------eeeeecCCCceeceeEEEEeC-CcEEEEEEEcCC----CceEEEEeeCCCCCeEEec
Q 040662 214 ----AIVA-YNVASQN------LEILPYPPSILFMYKYLTEYD-GSLLIFGKVVDG----SGYRVFTFNRSQMDWFEIE 276 (365)
Q Consensus 214 ----g~i~-~d~~~~~------~~~i~~p~~~~~~~~~Lve~~-G~L~lV~~~~~~----~~~~V~~ld~~~~~W~~v~ 276 (365)
..+. ||+.+++ |+.+...|+........+..+ |+|++++..... ..-.|+.+|..+.+|..+.
T Consensus 564 ~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~ 642 (695)
T 2zwa_A 564 TTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP 642 (695)
T ss_dssp SCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC
T ss_pred CeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee
Confidence 3577 9999988 777654222212223344556 999998765321 2456888898999999653
No 19
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.12 E-value=0.00042 Score=65.34 Aligned_cols=37 Identities=27% Similarity=0.401 Sum_probs=34.7
Q ss_pred CCChHH----HHHHHHhcCChhhhhhhhhcchhhHHhhccC
Q 040662 18 SDLPLE----IINSIVSRLYVVYQIRFRAVCKRWRAADIQS 54 (365)
Q Consensus 18 ~~LP~D----ll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~ 54 (365)
+.||+| |+..||..|+..+|+++..|||+|+.++.++
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~ 52 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDG 52 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHT
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCh
Confidence 569999 9999999999999999999999999998765
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.06 E-value=0.0023 Score=60.49 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHHhcCChhhhhhhhhcchhhHHhhcc
Q 040662 17 WSDLPLEIINSIVSRLYVVYQIRFRAVCKRWRAADIQ 53 (365)
Q Consensus 17 w~~LP~Dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~ 53 (365)
.+.||+||+..||+.|+.++|+++..|||.|+.++.+
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 5679999999999999999999999999999998876
No 21
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.97 E-value=0.00019 Score=72.51 Aligned_cols=207 Identities=11% Similarity=-0.044 Sum_probs=119.9
Q ss_pred cCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCC-C-----Ccccc--eeEEEEecCCCCCCeEEEEEeCCC-c-Ce
Q 040662 101 KHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLP-A-----WREFS--IAKATFSATPISPDCVVFVTWVGI-M-EI 170 (365)
Q Consensus 101 ~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP-~-----~~~~~--~~~~~ls~~p~s~~~~v~v~~~~~-~-~~ 170 (365)
.+|-|++..+... .....+.++||.|++|..++ + ++..+ ...+.++. ++.++++..... . ..
T Consensus 396 ~~~~iyv~GG~~~----~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~----~~~lyv~GG~~~~~~~~ 467 (695)
T 2zwa_A 396 AGNDVFYMGGSNP----YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR----NNQLLLIGGRKAPHQGL 467 (695)
T ss_dssp CSSCEEEECCBSS----SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT----TTEEEEECCBSSTTCBC
T ss_pred ECCEEEEECCCCC----CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc----CCEEEEEcCCCCCCCcc
Confidence 5677777665421 22467999999999998877 4 21111 12222211 233333322111 1 24
Q ss_pred EEEEEEecCCCceEEeeeeCCccceeeEEEE-CCEEEEEecCCC---cEEE-EEecCCceeeeec----CCCceeceeEE
Q 040662 171 SCISICRPGDTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSLE---AIVA-YNVASQNLEILPY----PPSILFMYKYL 241 (365)
Q Consensus 171 ~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~~---g~i~-~d~~~~~~~~i~~----p~~~~~~~~~L 241 (365)
..+.+|++.+++|+.++..........++.+ +|++|+ +.-. +.+. ||+.+.+|+.++. |.+........
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv--~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v 545 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLI--LGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLE 545 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEE--ECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEE
T ss_pred ccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEE--ECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEE
Confidence 5688999999999998743222234455554 999999 7532 2567 9999999998763 22322222222
Q ss_pred EEeC-CcEEEEEEEcCC---CceEEEEeeCCCCC------eEEeccCCCeEEEeccCCCCCCCCC-CeEEEeeeC-----
Q 040662 242 TEYD-GSLLIFGKVVDG---SGYRVFTFNRSQMD------WFEIESLDDRVLFTGASCLWVPVEK-GSAFANTVH----- 305 (365)
Q Consensus 242 ve~~-G~L~lV~~~~~~---~~~~V~~ld~~~~~------W~~v~~lg~~~lfvg~~~~~~~~~~-n~IYf~~~~----- 305 (365)
+..+ |+|++++..... ..-.||.+|..+.. |.++..++. .++........+ |.||+....
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~----~~R~~~~~~~~~~~~iyv~GG~~~~~~ 621 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL----FQRYGSQIKYITPRKLLIVGGTSPSGL 621 (695)
T ss_dssp EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG----GCCBSCEEEEEETTEEEEECCBCSSCC
T ss_pred EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC----CCcccceEEEeCCCEEEEECCccCCCC
Confidence 2333 889988765321 23468888887777 888876421 010000011234 888887531
Q ss_pred ---CCceEEEEcCceeeee
Q 040662 306 ---WFGRYSYIRDVCREFI 321 (365)
Q Consensus 306 ---~~~~~vy~l~~~~~~~ 321 (365)
.....+||+++++|..
T Consensus 622 ~~~~~~v~~yd~~t~~W~~ 640 (695)
T 2zwa_A 622 FDRTNSIISLDPLSETLTS 640 (695)
T ss_dssp CCTTTSEEEEETTTTEEEE
T ss_pred CCCCCeEEEEECCCCeEEE
Confidence 1224699999999874
No 22
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.75 E-value=1.3e-05 Score=73.05 Aligned_cols=43 Identities=30% Similarity=0.546 Sum_probs=37.8
Q ss_pred ccCCCCCCChHHHHHHHHhcCChhhhhhhhhcchhhHHhhccC
Q 040662 12 LERGSWSDLPLEIINSIVSRLYVVYQIRFRAVCKRWRAADIQS 54 (365)
Q Consensus 12 ~~~~~w~~LP~Dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~ 54 (365)
.+...|++||+|++..|+.+|+..++++++.|||+|+.++.++
T Consensus 4 ~~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~ 46 (336)
T 2ast_B 4 FPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE 46 (336)
T ss_dssp ---CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCS
T ss_pred cccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCc
Confidence 3467899999999999999999999999999999999998654
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.66 E-value=0.00022 Score=71.51 Aligned_cols=231 Identities=14% Similarity=0.076 Sum_probs=126.5
Q ss_pred eEEEcCCCCceEEEe-cCCCCCCCCCCCeE---EEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccce
Q 040662 69 CYLYDPCHKQKYTVF-NSDKNRTTLLGARP---LDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSI 144 (365)
Q Consensus 69 ~~~~~~~~~~~~~~~-l~~~~~P~~~~~~~---~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~ 144 (365)
...||+.+++|..+. + |..+...+ ....+|-|++..... ...+.++||.|++|.++|+++.-+.
T Consensus 221 ~~~yd~~t~~w~~~~~~-----~~~~~~~~~~~~~~~~g~lyv~GG~~-------~~~v~~yd~~t~~W~~~~~~~~~R~ 288 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVT-----VTKHDMFCPGISMDGNGQIVVTGGND-------AKKTSLYDSSSDSWIPGPDMQVARG 288 (656)
T ss_dssp EEEECTTTCCBCCCEEE-----ECSCCCSSCEEEECTTSCEEEECSSS-------TTCEEEEEGGGTEEEECCCCSSCCS
T ss_pred EEEEeCCCCcEEeCccc-----CCCCCCccccccCCCCCCEEEeCCCC-------CCceEEecCcCCceeECCCCCcccc
Confidence 367899998887654 3 32222222 223578888887642 2479999999999999988743332
Q ss_pred -eEEEEecCCCCCCeEEEEEe--CCCcCeEEEEEEecCCCceEEeee----eCCccceeeEEEECCEEEEEecC------
Q 040662 145 -AKATFSATPISPDCVVFVTW--VGIMEISCISICRPGDTTWTELRF----QDNYRYVKNLVCADGFLYCSFFS------ 211 (365)
Q Consensus 145 -~~~~ls~~p~s~~~~v~v~~--~~~~~~~~~~~~~~g~~~W~~~~~----~~~~~~~~~~v~~~G~lY~~~l~------ 211 (365)
..++.. + +..++++.. .+......+++|++.+++|+.++. |........++..++++|+ +.
T Consensus 289 ~~s~~~~--~--dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv--~Gg~~g~~ 362 (656)
T 1k3i_A 289 YQSSATM--S--DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWL--FGWKKGSV 362 (656)
T ss_dssp SCEEEEC--T--TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCE--EECGGGCE
T ss_pred ccceEEe--c--CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEE--EECCCCcE
Confidence 222221 1 123333322 111234578999999999999842 1000111122234566665 43
Q ss_pred ----CCcEEE-EEecCCceeeeecCCCc--------eeceeEEE-EeCCcEEEEEEEcC--C-----CceEEEEeeCCCC
Q 040662 212 ----LEAIVA-YNVASQNLEILPYPPSI--------LFMYKYLT-EYDGSLLIFGKVVD--G-----SGYRVFTFNRSQM 270 (365)
Q Consensus 212 ----~~g~i~-~d~~~~~~~~i~~p~~~--------~~~~~~Lv-e~~G~L~lV~~~~~--~-----~~~~V~~ld~~~~ 270 (365)
....+. ||+..++|.....+++. ......+. ..+|+|+++..... . ....|+..|..+.
T Consensus 363 ~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~ 442 (656)
T 1k3i_A 363 FQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS 442 (656)
T ss_dssp EECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC
T ss_pred EEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC
Confidence 234567 99988877532211111 11111121 24789888875421 0 1125777888889
Q ss_pred CeEEec--cCCC-eEEEeccCCCCCCCCCCeEEEeeeCC-----------CceEEEEcCceeeeec
Q 040662 271 DWFEIE--SLDD-RVLFTGASCLWVPVEKGSAFANTVHW-----------FGRYSYIRDVCREFIR 322 (365)
Q Consensus 271 ~W~~v~--~lg~-~~lfvg~~~~~~~~~~n~IYf~~~~~-----------~~~~vy~l~~~~~~~~ 322 (365)
.|.++. .|+. +... + ..-+-++.||+..... ....+||.+++++...
T Consensus 443 ~W~~~~~~~mp~~R~~~-~----~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~ 503 (656)
T 1k3i_A 443 PNTVFASNGLYFARTFH-T----SVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQ 503 (656)
T ss_dssp CEEEECTTCCSSCCBSC-E----EEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEEC
T ss_pred CeeEEccCCCCCCcccC-C----eEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeec
Confidence 999986 5542 1100 0 0012366677665311 1236899988887753
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.52 E-value=1.8e-05 Score=69.83 Aligned_cols=39 Identities=15% Similarity=0.213 Sum_probs=36.8
Q ss_pred CCCCChHHHHHHHHhcCChhhhhhhhhcchhhHHhhccC
Q 040662 16 SWSDLPLEIINSIVSRLYVVYQIRFRAVCKRWRAADIQS 54 (365)
Q Consensus 16 ~w~~LP~Dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~ 54 (365)
.+..||.||+..||+.|+.+|++++.+|||.||.++.++
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~ 42 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDP 42 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCH
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccc
Confidence 356899999999999999999999999999999999987
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.45 E-value=0.00073 Score=67.62 Aligned_cols=190 Identities=13% Similarity=0.059 Sum_probs=104.3
Q ss_pred EEEcCCCCceEEEe-cCCCCCCCCCCCeEEEccCCeEEEeccccccC-C--CCccccEEEEcCCCCCeeeCCCCcccc--
Q 040662 70 YLYDPCHKQKYTVF-NSDKNRTTLLGARPLDSKHGWVLFEGEKNVNS-G--GRKCSPLFFYSPFADQIINLPAWREFS-- 143 (365)
Q Consensus 70 ~~~~~~~~~~~~~~-l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~-~--~~~~~~~~l~NP~T~~~~~LP~~~~~~-- 143 (365)
..|||..++|..+. + |.......+...+|-|++........ . ......+.++||.|++|.++++++...
T Consensus 169 ~~~dp~~~~W~~~~~~-----P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 169 TAPQPGLGRWGPTIDL-----PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM 243 (656)
T ss_dssp CCCCTTSCEEEEEEEC-----SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC
T ss_pred ccCCCCCCeeeeeccC-----CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC
Confidence 45788888998754 5 65322222222277777765431100 0 001236889999999999887652211
Q ss_pred ee-EEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEE-CCEEEEEecCC--C-----c
Q 040662 144 IA-KATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSL--E-----A 214 (365)
Q Consensus 144 ~~-~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~--~-----g 214 (365)
+. .+++.. +..++++.... ...+.+|++.++.|+.++.....+....++.+ +|++|+ +.- . .
T Consensus 244 ~~~~~~~~~----~g~lyv~GG~~---~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv--~GG~~~~~~~~~ 314 (656)
T 1k3i_A 244 FCPGISMDG----NGQIVVTGGND---AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFT--IGGSWSGGVFEK 314 (656)
T ss_dssp SSCEEEECT----TSCEEEECSSS---TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEE--ECCCCCSSSCCC
T ss_pred ccccccCCC----CCCEEEeCCCC---CCceEEecCcCCceeECCCCCccccccceEEecCCeEEE--EeCcccCCcccc
Confidence 11 222221 22333332211 12689999999999998743222234556677 999999 764 1 2
Q ss_pred EEE-EEecCCceeeeec----CCCceeceeEEEEeCCcEEEEEEEcC-----CCceEEEEeeCCCCCeEE
Q 040662 215 IVA-YNVASQNLEILPY----PPSILFMYKYLTEYDGSLLIFGKVVD-----GSGYRVFTFNRSQMDWFE 274 (365)
Q Consensus 215 ~i~-~d~~~~~~~~i~~----p~~~~~~~~~Lve~~G~L~lV~~~~~-----~~~~~V~~ld~~~~~W~~ 274 (365)
.+. ||+.+++|+.++. |.+.... ..++..+++++++..... ...-.|+.+|.++..|.+
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE
T ss_pred cceEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee
Confidence 466 9999999998742 2221111 011112455554442210 123367777777778765
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.36 E-value=6.8e-05 Score=73.87 Aligned_cols=40 Identities=18% Similarity=0.347 Sum_probs=29.8
Q ss_pred ccCCCCCCChHHHHHHHHhcCC-hhhhhhhhhcchhhHHhh
Q 040662 12 LERGSWSDLPLEIINSIVSRLY-VVYQIRFRAVCKRWRAAD 51 (365)
Q Consensus 12 ~~~~~w~~LP~Dll~~Il~rLp-~~~l~r~r~VCk~Wrs~~ 51 (365)
|+...|++||+|++..|+.+|| .+++.+++.|||+|+.+.
T Consensus 1 ~~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~~ 41 (594)
T 2p1m_B 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIE 41 (594)
T ss_dssp ---------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHHH
T ss_pred CcccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHhh
Confidence 4556799999999999999999 899999999999999883
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.37 E-value=0.0012 Score=64.77 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=32.5
Q ss_pred CCChHHHHHHHHhcC-ChhhhhhhhhcchhhHHhhc
Q 040662 18 SDLPLEIINSIVSRL-YVVYQIRFRAVCKRWRAADI 52 (365)
Q Consensus 18 ~~LP~Dll~~Il~rL-p~~~l~r~r~VCk~Wrs~~~ 52 (365)
++||+|++..|+.+| +.+++.+++.|||+|+.+..
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~~ 49 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDS 49 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhhh
Confidence 589999999999999 79999999999999998843
No 28
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=83.72 E-value=22 Score=31.09 Aligned_cols=94 Identities=13% Similarity=0.021 Sum_probs=51.3
Q ss_pred EEEEEEecCCCceEEeeeeCCccceeeEEEE-CCEEEEEecCC---CcEEE-EEecCCceeeeecCCCceeceeEEEEe-
Q 040662 171 SCISICRPGDTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSL---EAIVA-YNVASQNLEILPYPPSILFMYKYLTEY- 244 (365)
Q Consensus 171 ~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~---~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~- 244 (365)
..+..++..++.++.+...........+++. +|++|+ .+. .+.|. +|+...+.+.+............+.-+
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~--~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYS--VDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEE--EEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEE--EEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC
Confidence 3344455666777665432111223345555 788988 765 36777 999776665544211111122234433
Q ss_pred CCcEEEEEEEcCCCceEEEEeeC
Q 040662 245 DGSLLIFGKVVDGSGYRVFTFNR 267 (365)
Q Consensus 245 ~G~L~lV~~~~~~~~~~V~~ld~ 267 (365)
+|+.+++.... ...+.||.++.
T Consensus 96 dg~~l~~~~~~-~~~v~v~~~~~ 117 (347)
T 3hfq_A 96 ARQLVYSANYH-KGTAEVMKIAA 117 (347)
T ss_dssp TTTEEEEEETT-TTEEEEEEECT
T ss_pred CCCEEEEEeCC-CCEEEEEEeCC
Confidence 68766655432 45688898864
No 29
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=81.18 E-value=23 Score=29.52 Aligned_cols=143 Identities=6% Similarity=-0.017 Sum_probs=73.5
Q ss_pred cccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCC-CceEEeeeeCCccceeeE
Q 040662 120 CSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGD-TTWTELRFQDNYRYVKNL 198 (365)
Q Consensus 120 ~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~-~~W~~~~~~~~~~~~~~~ 198 (365)
...++++|+.+++...+... .-....+.+ .|. +.++++. .. ..+.+++..+ +....+...........+
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~-~~~v~~~~~--spd-g~~l~~~-~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT-PELFEAPNW--SPD-GKYLLLN-SE-----GLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE-SSCCEEEEE--CTT-SSEEEEE-ET-----TEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred ceeEEEEeCCCCceeeeccC-CcceEeeEE--CCC-CCEEEEE-cC-----CeEEEEeCCCCCCceEeccccccccccce
Confidence 46899999999987655433 112333444 443 3444442 22 3677888776 665544322111123344
Q ss_pred EEE-CCEEEEEecCC----CcEEE-EEecCCceeeeecCCCceeceeEEEEe-CCcEEEEEEEcCCCceEEEEeeCCCCC
Q 040662 199 VCA-DGFLYCSFFSL----EAIVA-YNVASQNLEILPYPPSILFMYKYLTEY-DGSLLIFGKVVDGSGYRVFTFNRSQMD 271 (365)
Q Consensus 199 v~~-~G~lY~~~l~~----~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~-~G~L~lV~~~~~~~~~~V~~ld~~~~~ 271 (365)
.+. +|+..+ +... ...|. +|+.+.....+..... ...+.-+ +|+.+++.... ...++||.++..+..
T Consensus 91 ~~spdg~~l~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~-~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 91 GISPDGALYA-ISDKVEFGKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGIR-DQVFDIYSMDIDSGV 164 (297)
T ss_dssp EECTTSSEEE-EEECTTTSSCEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEEE-TTEEEEEEEETTTCC
T ss_pred EECCCCCEEE-EEEeCCCCcceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEECC-CCceEEEEEECCCCc
Confidence 444 554332 0331 34566 7776554333322211 1112222 57766644433 356899999877666
Q ss_pred eEEeccC
Q 040662 272 WFEIESL 278 (365)
Q Consensus 272 W~~v~~l 278 (365)
..++...
T Consensus 165 ~~~~~~~ 171 (297)
T 2ojh_A 165 ETRLTHG 171 (297)
T ss_dssp EEECCCS
T ss_pred ceEcccC
Confidence 6555443
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=78.99 E-value=28 Score=29.27 Aligned_cols=130 Identities=8% Similarity=-0.013 Sum_probs=68.2
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeC--CCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEe
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINL--PAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICR 177 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~L--P~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~ 177 (365)
..+|-+++.+.. ...++.+|+ +++...+ |.. .. .-..+..++. +. +++... ....+..++
T Consensus 149 ~~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~~~~~--~~-~~~~i~~~~~-g~--l~v~~~---~~~~i~~~~ 210 (299)
T 2z2n_A 149 GSDNALWFTENQ--------NNAIGRITE-SGDITEFKIPTP--AS-GPVGITKGND-DA--LWFVEI---IGNKIGRIT 210 (299)
T ss_dssp CTTSCEEEEETT--------TTEEEEECT-TCCEEEEECSST--TC-CEEEEEECTT-SS--EEEEET---TTTEEEEEC
T ss_pred cCCCCEEEEeCC--------CCEEEEEcC-CCcEEEeeCCCC--CC-cceeEEECCC-CC--EEEEcc---CCceEEEEC
Confidence 346777776554 367999999 8876553 321 11 1112334443 23 233332 123677778
Q ss_pred cCCCceEEeeeeCCccceeeEEEE-CCEEEEEecCC-CcEEE-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEE
Q 040662 178 PGDTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSL-EAIVA-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFG 252 (365)
Q Consensus 178 ~g~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~-~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~ 252 (365)
+ ++....+..+........+++. +|.+|+ .+. .+.|. ||+. .++..+..+.... ....+...+|.|++..
T Consensus 211 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v--~~~~~~~i~~~d~~-g~~~~~~~~~~~~-~~~~i~~~~g~l~v~~ 283 (299)
T 2z2n_A 211 T-SGEITEFKIPTPNARPHAITAGAGIDLWF--TEWGANKIGRLTSN-NIIEEYPIQIKSA-EPHGICFDGETIWFAM 283 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTTCEEE--EETTTTEEEEEETT-TEEEEEECSSSSC-CEEEEEECSSCEEEEE
T ss_pred C-CCcEEEEECCCCCCCceeEEECCCCCEEE--eccCCceEEEECCC-CceEEEeCCCCCC-ccceEEecCCCEEEEe
Confidence 7 6666655433222234455554 688888 763 46777 9984 4554444332111 1112222568887754
No 31
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=75.39 E-value=41 Score=29.37 Aligned_cols=185 Identities=9% Similarity=0.027 Sum_probs=100.4
Q ss_pred cCCeEEEeccccccCCCCccccEEEEcCCCCCee-eCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecC
Q 040662 101 KHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII-NLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPG 179 (365)
Q Consensus 101 ~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g 179 (365)
.++-+++.... .+.+.++|+.|++.+ ++|.. .. -..++++.+ . .+++... ....+.+++..
T Consensus 52 ~~~~lyv~~~~--------~~~v~viD~~t~~~~~~i~~~-~~-p~~i~~~~~----g-~lyv~~~---~~~~v~~iD~~ 113 (328)
T 3dsm_A 52 RDGIGWIVVNN--------SHVIFAIDINTFKEVGRITGF-TS-PRYIHFLSD----E-KAYVTQI---WDYRIFIINPK 113 (328)
T ss_dssp ETTEEEEEEGG--------GTEEEEEETTTCCEEEEEECC-SS-EEEEEEEET----T-EEEEEEB---SCSEEEEEETT
T ss_pred ECCEEEEEEcC--------CCEEEEEECcccEEEEEcCCC-CC-CcEEEEeCC----C-eEEEEEC---CCCeEEEEECC
Confidence 46667766654 368999999999874 45533 11 123334322 3 3444442 12477888887
Q ss_pred CCceE-EeeeeC---CccceeeEEEECCEEEEEecCC--CcEEE-EEecCCce-eeeecCCCceeceeEEEE-eCCcEEE
Q 040662 180 DTTWT-ELRFQD---NYRYVKNLVCADGFLYCSFFSL--EAIVA-YNVASQNL-EILPYPPSILFMYKYLTE-YDGSLLI 250 (365)
Q Consensus 180 ~~~W~-~~~~~~---~~~~~~~~v~~~G~lY~~~l~~--~g~i~-~d~~~~~~-~~i~~p~~~~~~~~~Lve-~~G~L~l 250 (365)
+.+-. .++... .......+++.+|++|+ .+. .+.|. +|+.+.+. ..++... ....+.. -+|++++
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv--~~~~~~~~v~viD~~t~~~~~~i~~g~----~p~~i~~~~dG~l~v 187 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQYGKYVYV--NCWSYQNRILKIDTETDKVVDELTIGI----QPTSLVMDKYNKMWT 187 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEEETTEEEE--EECTTCCEEEEEETTTTEEEEEEECSS----CBCCCEECTTSEEEE
T ss_pred CCeEEEEEEcCCccccCCCcceEEEECCEEEE--EcCCCCCEEEEEECCCCeEEEEEEcCC----CccceEEcCCCCEEE
Confidence 76532 222211 00134466668999999 764 56777 99987643 2333211 0112222 3588776
Q ss_pred EEEEcCC------CceEEEEeeCCCCCeEEeccCC--C--eEEEeccCCCCCCCCCCeEEEeeeCCCceEEEEcCceee
Q 040662 251 FGKVVDG------SGYRVFTFNRSQMDWFEIESLD--D--RVLFTGASCLWVPVEKGSAFANTVHWFGRYSYIRDVCRE 319 (365)
Q Consensus 251 V~~~~~~------~~~~V~~ld~~~~~W~~v~~lg--~--~~lfvg~~~~~~~~~~n~IYf~~~~~~~~~vy~l~~~~~ 319 (365)
+...... ..-.|+++|..+.+..+.-.++ . ..+-+. -.++.+|+.+. ...+|++++++.
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~-------~d~~~lyv~~~---~v~~~d~~t~~~ 256 (328)
T 3dsm_A 188 ITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN-------GTRDTLYWINN---DIWRMPVEADRV 256 (328)
T ss_dssp EBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC-------TTSCEEEEESS---SEEEEETTCSSC
T ss_pred EECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe-------cCCCEEEEEcc---EEEEEECCCCce
Confidence 6542200 1247888888766655433342 1 111111 24778888763 456778777664
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=72.79 E-value=47 Score=28.84 Aligned_cols=51 Identities=16% Similarity=0.266 Sum_probs=30.9
Q ss_pred EEEEEEecCCCceEEeeeeCC-ccceeeEEEEC---C-EEEEEecCCCcEEE-EEecCC
Q 040662 171 SCISICRPGDTTWTELRFQDN-YRYVKNLVCAD---G-FLYCSFFSLEAIVA-YNVASQ 223 (365)
Q Consensus 171 ~~~~~~~~g~~~W~~~~~~~~-~~~~~~~v~~~---G-~lY~~~l~~~g~i~-~d~~~~ 223 (365)
..+.+|+..++.|..+..... ......+.+.. | .++. .+.+|.|. +|+...
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~--~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV--ASSDGKVSVVEFKEN 135 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE--EETTSEEEEEECCTT
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEE--ecCCCcEEEEecCCC
Confidence 467788888887766654321 12345555552 3 4544 55678888 998765
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=70.94 E-value=41 Score=29.36 Aligned_cols=137 Identities=11% Similarity=0.021 Sum_probs=72.1
Q ss_pred eEEEEEEecCCCceEEeee----eCCc-cceeeEEEECCEEEEEecCC-CcEEE-EEecCCce-eeeecCCCceeceeEE
Q 040662 170 ISCISICRPGDTTWTELRF----QDNY-RYVKNLVCADGFLYCSFFSL-EAIVA-YNVASQNL-EILPYPPSILFMYKYL 241 (365)
Q Consensus 170 ~~~~~~~~~g~~~W~~~~~----~~~~-~~~~~~v~~~G~lY~~~l~~-~g~i~-~d~~~~~~-~~i~~p~~~~~~~~~L 241 (365)
...+.++++.+++....-. .... ....++++.++++|+ .+. .+.|. +|+.+.+. ..++.. .....+
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv--~~~~~~~v~viD~~t~~~~~~i~~~----~~p~~i 89 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWI--VVNNSHVIFAIDINTFKEVGRITGF----TSPRYI 89 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEE--EEGGGTEEEEEETTTCCEEEEEECC----SSEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEE--EEcCCCEEEEEECcccEEEEEcCCC----CCCcEE
Confidence 4678888988777643210 1111 235677888999999 776 46777 99976543 233211 122344
Q ss_pred EE-eCCcEEEEEEEcCCCceEEEEeeCCCCCeEEeccCCCeEEEeccC-C-CCCCCCCCeEEEeeeC-CCceEEEEcCce
Q 040662 242 TE-YDGSLLIFGKVVDGSGYRVFTFNRSQMDWFEIESLDDRVLFTGAS-C-LWVPVEKGSAFANTVH-WFGRYSYIRDVC 317 (365)
Q Consensus 242 ve-~~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~-~-~~~~~~~n~IYf~~~~-~~~~~vy~l~~~ 317 (365)
+. .+|+|++.... .-.|+.+|..+.+-...-.+|... +.. . ....+.++.+|..+.. .....+++++++
T Consensus 90 ~~~~~g~lyv~~~~----~~~v~~iD~~t~~~~~~i~~g~~~---~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 90 HFLSDEKAYVTQIW----DYRIFIINPKTYEITGYIECPDMD---MESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp EEEETTEEEEEEBS----CSEEEEEETTTTEEEEEEECTTCC---TTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTT
T ss_pred EEeCCCeEEEEECC----CCeEEEEECCCCeEEEEEEcCCcc---ccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCC
Confidence 44 46776654422 225677776655433222233200 000 0 0011256777777642 233467777766
Q ss_pred ee
Q 040662 318 RE 319 (365)
Q Consensus 318 ~~ 319 (365)
+.
T Consensus 163 ~~ 164 (328)
T 3dsm_A 163 KV 164 (328)
T ss_dssp EE
T ss_pred eE
Confidence 54
No 34
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=70.49 E-value=50 Score=28.20 Aligned_cols=147 Identities=12% Similarity=0.146 Sum_probs=72.0
Q ss_pred ccEEEEcCCC-CCeeeCC-----CCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEec--CCCceEEeee----
Q 040662 121 SPLFFYSPFA-DQIINLP-----AWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRP--GDTTWTELRF---- 188 (365)
Q Consensus 121 ~~~~l~NP~T-~~~~~LP-----~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~--g~~~W~~~~~---- 188 (365)
+.+.+++..+ ++...+. ......... +..+|. +.++++.... ...+.+|+. .++.++....
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~pd-g~~l~~~~~~----~~~i~~~~~~~~~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH--MVFHPN-EQYAYCVNEL----NSSVDVWELKDPHGNIECVQTLDMM 223 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEEE--EEECTT-SSEEEEEETT----TTEEEEEESSCTTSCCEEEEEEECS
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcce--EEECCC-CCEEEEEeCC----CCEEEEEEecCCCCcEEEEeecccc
Confidence 5788888877 5443211 100111122 334553 3444443322 236777776 3455543332
Q ss_pred eCC---ccceeeEEEE-CC-EEEEEecC-CCcEEE-EEec--CCceeeeecCCCceeceeEEEEe-CCcEEEEEEEcCCC
Q 040662 189 QDN---YRYVKNLVCA-DG-FLYCSFFS-LEAIVA-YNVA--SQNLEILPYPPSILFMYKYLTEY-DGSLLIFGKVVDGS 258 (365)
Q Consensus 189 ~~~---~~~~~~~v~~-~G-~lY~~~l~-~~g~i~-~d~~--~~~~~~i~~p~~~~~~~~~Lve~-~G~L~lV~~~~~~~ 258 (365)
+.. ......+.+. +| .+|+ .. ..+.|. ||+. +.+.+.+...+.... ...+.-+ +|+.+++.... ..
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v--~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~-~~ 299 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYA--CDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQK-SH 299 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEE--EETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTT-TC
T ss_pred CccccccCCccceEECCCCCEEEE--EecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCC-CC
Confidence 111 0112345554 45 5665 44 357777 9987 334444332111111 1122222 57766654422 46
Q ss_pred ceEEEEeeCCCCCeEEeccC
Q 040662 259 GYRVFTFNRSQMDWFEIESL 278 (365)
Q Consensus 259 ~~~V~~ld~~~~~W~~v~~l 278 (365)
.+.||.+|.++++++++..+
T Consensus 300 ~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 300 HISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEEEEEETTTTEEEEEEEE
T ss_pred eEEEEEEcCCCceeeEcccc
Confidence 79999999888788777654
No 35
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=66.92 E-value=95 Score=30.79 Aligned_cols=51 Identities=16% Similarity=0.266 Sum_probs=31.0
Q ss_pred EEEEEEecCCCceEEeeeeCC-ccceeeEEEEC---C-EEEEEecCCCcEEE-EEecCC
Q 040662 171 SCISICRPGDTTWTELRFQDN-YRYVKNLVCAD---G-FLYCSFFSLEAIVA-YNVASQ 223 (365)
Q Consensus 171 ~~~~~~~~g~~~W~~~~~~~~-~~~~~~~v~~~---G-~lY~~~l~~~g~i~-~d~~~~ 223 (365)
..+.+|+..++.|..+..... ......+.+.. | .++. .+.+|.|. +|+...
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s--gs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV--ASSDGKVSVVEFKEN 133 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE--EETTSEEEEEECCSS
T ss_pred CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE--EeCCCcEEEEEeecC
Confidence 467788887777766654321 22345555552 4 4544 55678888 998765
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=64.15 E-value=75 Score=27.89 Aligned_cols=93 Identities=10% Similarity=0.065 Sum_probs=49.1
Q ss_pred cccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeEE
Q 040662 120 CSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNLV 199 (365)
Q Consensus 120 ~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v 199 (365)
.+.+.++|..+++.+..-.. .-....+.+ .|. +.++++... ....+.+++..+++-...-... .....++
T Consensus 11 d~~v~v~d~~~~~~~~~~~~-~~~~~~~~~--s~d-g~~l~~~~~----~d~~i~v~d~~~~~~~~~~~~~--~~v~~~~ 80 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPV-GSNPMGAVI--SPD-GTKVYVANA----HSNDVSIIDTATNNVIATVPAG--SSPQGVA 80 (391)
T ss_dssp TTEEEEEETTTTEEEEEEEC-SSSEEEEEE--CTT-SSEEEEEEG----GGTEEEEEETTTTEEEEEEECS--SSEEEEE
T ss_pred CCEEEEEECCCCeEEEEeec-CCCcceEEE--CCC-CCEEEEECC----CCCeEEEEECCCCeEEEEEECC--CCccceE
Confidence 36899999999876542221 111233333 443 344444332 2247788887766533222111 1344555
Q ss_pred EE-CCE-EEEEecCC-CcEEE-EEecCCc
Q 040662 200 CA-DGF-LYCSFFSL-EAIVA-YNVASQN 224 (365)
Q Consensus 200 ~~-~G~-lY~~~l~~-~g~i~-~d~~~~~ 224 (365)
+. +|. +|+ ... .+.|. +|+.+.+
T Consensus 81 ~spdg~~l~~--~~~~~~~v~v~d~~~~~ 107 (391)
T 1l0q_A 81 VSPDGKQVYV--TNMASSTLSVIDTTSNT 107 (391)
T ss_dssp ECTTSSEEEE--EETTTTEEEEEETTTTE
T ss_pred ECCCCCEEEE--EECCCCEEEEEECCCCe
Confidence 55 454 555 443 47788 9998754
No 37
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=61.60 E-value=62 Score=29.52 Aligned_cols=116 Identities=9% Similarity=-0.008 Sum_probs=62.4
Q ss_pred EEEE--CCEEEEEecCCCcEEE-EEecCCceeeeec----------CCCc-eeceeEEEEeC-CcEEEEEEEcC-----C
Q 040662 198 LVCA--DGFLYCSFFSLEAIVA-YNVASQNLEILPY----------PPSI-LFMYKYLTEYD-GSLLIFGKVVD-----G 257 (365)
Q Consensus 198 ~v~~--~G~lY~~~l~~~g~i~-~d~~~~~~~~i~~----------p~~~-~~~~~~Lve~~-G~L~lV~~~~~-----~ 257 (365)
..+. +|++++ ++..|.+. +|..+++-+++.. +... ......-+.-+ ++|++...... .
T Consensus 231 ~~~~~~dG~~~~--vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 231 PAYSQKAGRLVW--PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp CEEETTTTEEEE--EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred ceeEcCCCcEEE--EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 4453 789877 88889988 9997664322211 0000 01112222323 45555543221 1
Q ss_pred CceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCCCCCC-CeEEEeeeCCCceEEEEcCceeee
Q 040662 258 SGYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWVPVEK-GSAFANTVHWFGRYSYIRDVCREF 320 (365)
Q Consensus 258 ~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~~~~-n~IYf~~~~~~~~~vy~l~~~~~~ 320 (365)
..=+||.+|.++++-.+.-.+|.+..=+. +.-.+ +.+|..+.......+||..+++.-
T Consensus 309 ~~~~V~viD~~t~kv~~~i~vg~~~~~la-----vs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKFEMGHEIDSIN-----VSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEEEECEEE-----ECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCeEEEEEECCCCcceEE-----ECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 34689999998776655544554321111 11123 467766643444679998887643
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=60.91 E-value=72 Score=26.56 Aligned_cols=105 Identities=9% Similarity=-0.026 Sum_probs=54.5
Q ss_pred cCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCC
Q 040662 101 KHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGD 180 (365)
Q Consensus 101 ~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~ 180 (365)
.+|-|++.+.. .+.+.++|+ +++...++...... .-..+..++. +. +++... ....+..+++ +
T Consensus 192 ~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~~~~-g~--l~v~~~---~~~~i~~~d~-~ 254 (299)
T 2z2n_A 192 NDDALWFVEII--------GNKIGRITT-SGEITEFKIPTPNA-RPHAITAGAG-ID--LWFTEW---GANKIGRLTS-N 254 (299)
T ss_dssp TTSSEEEEETT--------TTEEEEECT-TCCEEEEECSSTTC-CEEEEEECST-TC--EEEEET---TTTEEEEEET-T
T ss_pred CCCCEEEEccC--------CceEEEECC-CCcEEEEECCCCCC-CceeEEECCC-CC--EEEecc---CCceEEEECC-C
Confidence 35767776654 367999999 88765432111111 1112334443 23 333332 1235667776 4
Q ss_pred CceEEeeeeCCccceeeEEEECCEEEEEecCCCcEEE-EEecCCc
Q 040662 181 TTWTELRFQDNYRYVKNLVCADGFLYCSFFSLEAIVA-YNVASQN 224 (365)
Q Consensus 181 ~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~~g~i~-~d~~~~~ 224 (365)
+.-+.+..+........+++-+|.+|+ .+..+.+. ||+.+++
T Consensus 255 g~~~~~~~~~~~~~~~~i~~~~g~l~v--~~~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 255 NIIEEYPIQIKSAEPHGICFDGETIWF--AMECDKIGKLTLIKDN 297 (299)
T ss_dssp TEEEEEECSSSSCCEEEEEECSSCEEE--EETTTEEEEEEEC---
T ss_pred CceEEEeCCCCCCccceEEecCCCEEE--EecCCcEEEEEcCccc
Confidence 444444333212234455557789988 76566777 9987654
No 39
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=60.62 E-value=1.2e+02 Score=29.09 Aligned_cols=190 Identities=4% Similarity=-0.128 Sum_probs=95.1
Q ss_pred CCeEEEeccccccCCCCccccEEEEcCCCCCee-eCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCC
Q 040662 102 HGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII-NLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGD 180 (365)
Q Consensus 102 ~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~ 180 (365)
++++++.... .+.+.++|+.|++.+ ++|.- . ....+.+ +|. ++++++ ... ...+.+++..+
T Consensus 166 ~~~~~V~~~~--------~~~V~viD~~t~~v~~~i~~g-~-~p~~v~~--SpD-Gr~lyv-~~~----dg~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLRD--------AGQIALIDGSTYEIKTVLDTG-Y-AVHISRL--SAS-GRYLFV-IGR----DGKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEETT--------TTEEEEEETTTCCEEEEEECS-S-CEEEEEE--CTT-SCEEEE-EET----TSEEEEEETTS
T ss_pred CceEEEEeCC--------CCeEEEEECCCCeEEEEEeCC-C-CccceEE--CCC-CCEEEE-EcC----CCeEEEEECCC
Confidence 4566666655 478999999999865 34422 1 1233444 342 345444 332 23688888741
Q ss_pred CceEEeeeeCCccceeeEEEE-----CCE-EEEEecCC-CcEEE-EEecCCc-eeeeecCCC--c---ee---ceeEEEE
Q 040662 181 TTWTELRFQDNYRYVKNLVCA-----DGF-LYCSFFSL-EAIVA-YNVASQN-LEILPYPPS--I---LF---MYKYLTE 243 (365)
Q Consensus 181 ~~W~~~~~~~~~~~~~~~v~~-----~G~-lY~~~l~~-~g~i~-~d~~~~~-~~~i~~p~~--~---~~---~~~~Lve 243 (365)
.+-+.+..-........+++. +|+ +|+ .+. .+.+. +|..+.+ ...++.... . +. .-..++.
T Consensus 228 ~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v--~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 228 KEPTTVAEIKIGSEARSIETSKMEGWEDKYAIA--GAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp SSCCEEEEEECCSEEEEEEECCSTTCTTTEEEE--EEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred CCCcEeEEEecCCCCceeEEccccCCCCCEEEE--EEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 111222211011235577777 675 565 544 36777 9975532 222332110 0 00 1123444
Q ss_pred e-CCcEEEEEEEcCCCceEEEEeeCCCCCeEEeccCCC-eEEEeccCCCCCCC--CCCeEEEeeeCCCceEEEEcCceee
Q 040662 244 Y-DGSLLIFGKVVDGSGYRVFTFNRSQMDWFEIESLDD-RVLFTGASCLWVPV--EKGSAFANTVHWFGRYSYIRDVCRE 319 (365)
Q Consensus 244 ~-~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~~lg~-~~lfvg~~~~~~~~--~~n~IYf~~~~~~~~~vy~l~~~~~ 319 (365)
+ ++..++|.... .=+||.+|.......++..++. +.+- +.++ .+..+|......+...++|+++++.
T Consensus 306 s~~~~~~vv~~~~---~g~v~~vd~~~~~~~~v~~i~~~~~~~------d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 306 SHYRPEFIVNVKE---TGKILLVDYTDLNNLKTTEISAERFLH------DGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp CSSSSEEEEEETT---TTEEEEEETTCSSEEEEEEEECCSSEE------EEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred cCCCCEEEEEecC---CCeEEEEecCCCccceeeeeecccccc------CceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 4 35556655532 2367778876655555555531 1110 1112 3444555543334457888888875
Q ss_pred e
Q 040662 320 F 320 (365)
Q Consensus 320 ~ 320 (365)
.
T Consensus 377 ~ 377 (567)
T 1qks_A 377 V 377 (567)
T ss_dssp E
T ss_pred E
Confidence 4
No 40
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=58.57 E-value=90 Score=26.93 Aligned_cols=159 Identities=10% Similarity=0.110 Sum_probs=76.9
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCC-CCCeeeCCCC---cccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEE
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPF-ADQIINLPAW---REFSIAKATFSATPISPDCVVFVTWVGIMEISCISI 175 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~-T~~~~~LP~~---~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~ 175 (365)
+.+|-+++.+.. ...+.+++.. +++...+... ....... +.++|. ++++++..... ..+.+
T Consensus 149 spdg~l~v~~~~--------~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~--~~~spd-g~~l~v~~~~~----~~v~v 213 (347)
T 3hfq_A 149 TPDNRLAVIDLG--------SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH--LVFSPD-GQYAFLAGELS----SQIAS 213 (347)
T ss_dssp CTTSCEEEEETT--------TTEEEEEEECTTSCEEEEEEEECCTTCCEEE--EEECTT-SSEEEEEETTT----TEEEE
T ss_pred CCCCcEEEEeCC--------CCEEEEEEECCCCcEEEeeeEEcCCCCCCce--EEECCC-CCEEEEEeCCC----CEEEE
Confidence 335545555543 3578888877 5554322111 0001122 334553 34444433221 24445
Q ss_pred Ee--cCCCceEEeeeeCCc-------cceeeEEEE-CCE-EEEEecCC-CcEEE-EEecCC-ceeeeecCCCceeceeEE
Q 040662 176 CR--PGDTTWTELRFQDNY-------RYVKNLVCA-DGF-LYCSFFSL-EAIVA-YNVASQ-NLEILPYPPSILFMYKYL 241 (365)
Q Consensus 176 ~~--~g~~~W~~~~~~~~~-------~~~~~~v~~-~G~-lY~~~l~~-~g~i~-~d~~~~-~~~~i~~p~~~~~~~~~L 241 (365)
|+ ..++.++.+...... .....+++. +|+ +|+ .+. .+.|. ||++.. +++.+...+........+
T Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v--~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~ 291 (347)
T 3hfq_A 214 LKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYV--SNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDF 291 (347)
T ss_dssp EEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEE--EEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEE
T ss_pred EEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEE--EeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeE
Confidence 54 435666554421111 123445554 676 666 554 46777 888632 344333211111111223
Q ss_pred EEe-CCcEEEEEEEcCCCceEEEEeeCCCCCeEEec
Q 040662 242 TEY-DGSLLIFGKVVDGSGYRVFTFNRSQMDWFEIE 276 (365)
Q Consensus 242 ve~-~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~ 276 (365)
.-+ +|+.++|... ....+.||++|.++.+-.++.
T Consensus 292 ~~spdg~~l~v~~~-~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 292 DLDPTEAFVVVVNQ-NTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEEEEEc-CCCcEEEEEEeCCCCeEEecc
Confidence 333 6876655443 245799999998777777655
No 41
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=58.57 E-value=79 Score=26.30 Aligned_cols=190 Identities=12% Similarity=-0.005 Sum_probs=89.9
Q ss_pred EccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEec
Q 040662 99 DSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRP 178 (365)
Q Consensus 99 ~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~ 178 (365)
...+|.|+.++.. .+.++.+++-++....+-.. .+. .-..+..+|.. ..+. ++.. ....+.+++.
T Consensus 44 d~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~~~-~~~-~p~~ia~d~~~-~~ly-v~d~---~~~~I~~~~~ 108 (267)
T 1npe_A 44 DCVDKVVYWTDIS--------EPSIGRASLHGGEPTTIIRQ-DLG-SPEGIALDHLG-RTIF-WTDS---QLDRIEVAKM 108 (267)
T ss_dssp ETTTTEEEEEETT--------TTEEEEEESSSCCCEEEECT-TCC-CEEEEEEETTT-TEEE-EEET---TTTEEEEEET
T ss_pred ecCCCEEEEEECC--------CCEEEEEecCCCCcEEEEEC-CCC-CccEEEEEecC-CeEE-EEEC---CCCEEEEEEc
Confidence 3457888888775 36789999877654332111 111 11123334432 2322 2232 1235666665
Q ss_pred CCCceEEeeeeCCccceeeEEEE--CCEEEEEecCCC---cEEE-EEecCCceeeeecCCCceeceeEEEE-eC-CcEEE
Q 040662 179 GDTTWTELRFQDNYRYVKNLVCA--DGFLYCSFFSLE---AIVA-YNVASQNLEILPYPPSILFMYKYLTE-YD-GSLLI 250 (365)
Q Consensus 179 g~~~W~~~~~~~~~~~~~~~v~~--~G~lY~~~l~~~---g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve-~~-G~L~l 250 (365)
....-+.+. +........+++. +|.+|+ .+.. +.|. ++++....+.+..... ....-+.- .+ +.|++
T Consensus 109 ~g~~~~~~~-~~~~~~P~~i~vd~~~g~lyv--~~~~~~~~~I~~~~~dg~~~~~~~~~~~--~~P~gia~d~~~~~lyv 183 (267)
T 1npe_A 109 DGTQRRVLF-DTGLVNPRGIVTDPVRGNLYW--TDWNRDNPKIETSHMDGTNRRILAQDNL--GLPNGLTFDAFSSQLCW 183 (267)
T ss_dssp TSCSCEEEE-CSSCSSEEEEEEETTTTEEEE--EECCSSSCEEEEEETTSCCCEEEECTTC--SCEEEEEEETTTTEEEE
T ss_pred CCCCEEEEE-ECCCCCccEEEEeeCCCEEEE--EECCCCCcEEEEEecCCCCcEEEEECCC--CCCcEEEEcCCCCEEEE
Confidence 432222221 1112245666776 689999 7653 5777 8887654333321111 11122222 23 45555
Q ss_pred EEEEcCCCceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCCCCCCCeEEEeeeCCCceEEEEcCceee
Q 040662 251 FGKVVDGSGYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWVPVEKGSAFANTVHWFGRYSYIRDVCRE 319 (365)
Q Consensus 251 V~~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~~~~n~IYf~~~~~~~~~vy~l~~~~~ 319 (365)
.... .-.|+++|..+..-..+..-+... ......++.+|+.+.......+++.++++.
T Consensus 184 ~d~~----~~~I~~~~~~g~~~~~~~~~~~~P-------~gi~~d~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 184 VDAG----THRAECLNPAQPGRRKVLEGLQYP-------FAVTSYGKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp EETT----TTEEEEEETTEEEEEEEEECCCSE-------EEEEEETTEEEEEETTTTEEEEEETTTTEE
T ss_pred EECC----CCEEEEEecCCCceEEEecCCCCc-------eEEEEeCCEEEEEECCCCeEEEEeCCCCCc
Confidence 4322 225666665432111111100000 001135788999875434456888877653
No 42
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=58.34 E-value=1e+02 Score=27.63 Aligned_cols=201 Identities=10% Similarity=0.046 Sum_probs=92.2
Q ss_pred hhhhcchhhHHhhccCC-----CCCceEEEeeCCceEEEcCCCCceEEEecCCCCCCCCCCCe--EEEccCCeEEEeccc
Q 040662 39 RFRAVCKRWRAADIQSR-----DKFPWLMGYNSHSCYLYDPCHKQKYTVFNSDKNRTTLLGAR--PLDSKHGWVLFEGEK 111 (365)
Q Consensus 39 r~r~VCk~Wrs~~~~~~-----~~~P~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~~~~~--~~~s~~G~l~~~~~~ 111 (365)
.|++.|..=..+..+.+ ...|+|++........+++.......+ + +.+.... .+...+|.|+.++..
T Consensus 63 ~~~C~C~~g~~l~~d~~~C~~~~~~~~l~~~~~~~I~~i~~~~~~~~~~-~-----~~~~~~~gl~~d~~~~~ly~~D~~ 136 (386)
T 3v65_B 63 AFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLL-L-----NNLENAIALDFHHRRELVFWSDVT 136 (386)
T ss_dssp -CCEECCTTEEECTTSSCEEECSSCCEEEEECBSCEEEECTTSCCCEEE-E-----CSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEECCCceEcCCCCeECCccccceeEeecCccceeeccCCCcEEEE-e-----cCCCccEEEEEecCCCeEEEEeCC
Confidence 45666665333222111 235666654444445556554433222 1 2221111 133457888888876
Q ss_pred cccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCC
Q 040662 112 NVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDN 191 (365)
Q Consensus 112 ~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~ 191 (365)
...++.+++-++....+-.. .+.. -..++.++..+ .+.+ ... ....+.+++.....-+.+.. ..
T Consensus 137 --------~~~I~r~~~~g~~~~~~~~~-~~~~-p~glavd~~~g-~lY~-~d~---~~~~I~~~~~dg~~~~~l~~-~~ 200 (386)
T 3v65_B 137 --------LDRILRANLNGSNVEEVVST-GLES-PGGLAVDWVHD-KLYW-TDS---GTSRIEVANLDGAHRKVLLW-QS 200 (386)
T ss_dssp --------TTEEEEEETTSCCEEEEECS-SCSC-CCCEEEETTTT-EEEE-EET---TTTEEEECBTTSCSCEEEEC-SS
T ss_pred --------CCcEEEEecCCCCcEEEEeC-CCCC-ccEEEEEeCCC-eEEE-EcC---CCCeEEEEeCCCCceEEeec-CC
Confidence 36788899887764433111 1100 00122233222 2222 221 11245555543322222221 12
Q ss_pred ccceeeEEEE--CCEEEEEecCCC--cEEE-EEecCCceeeeecCCCceeceeEEEE--eCCcEEEEEEEcCCCceEEEE
Q 040662 192 YRYVKNLVCA--DGFLYCSFFSLE--AIVA-YNVASQNLEILPYPPSILFMYKYLTE--YDGSLLIFGKVVDGSGYRVFT 264 (365)
Q Consensus 192 ~~~~~~~v~~--~G~lY~~~l~~~--g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve--~~G~L~lV~~~~~~~~~~V~~ 264 (365)
......+++. +|.+|| .+.. +.|. ++++...-..+..... ....-|.- .+|+|+.+... .-.|++
T Consensus 201 l~~P~giavdp~~g~ly~--td~~~~~~I~r~~~dG~~~~~~~~~~~--~~PnGlavd~~~~~lY~aD~~----~~~I~~ 272 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYW--TDWGNTPRIEASSMDGSGRRIIADTHL--FWPNGLTIDYAGRRMYWVDAK----HHVIER 272 (386)
T ss_dssp CSCEEEEEEETTTTEEEE--EECSSSCEEEEEETTSCSCEEEECSSC--SCEEEEEEEGGGTEEEEEETT----TTEEEE
T ss_pred CCCCcEEEEEcCCCeEEE--eccCCCCEEEEEeCCCCCcEEEEECCC--CCeeeEEEeCCCCEEEEEECC----CCEEEE
Confidence 2345677776 789999 7653 6788 9987643333321111 01122332 25677765432 236677
Q ss_pred eeCCC
Q 040662 265 FNRSQ 269 (365)
Q Consensus 265 ld~~~ 269 (365)
+|.++
T Consensus 273 ~d~dG 277 (386)
T 3v65_B 273 ANLDG 277 (386)
T ss_dssp ECTTS
T ss_pred EeCCC
Confidence 76554
No 43
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=57.89 E-value=82 Score=26.28 Aligned_cols=148 Identities=7% Similarity=0.124 Sum_probs=72.5
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecC
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPG 179 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g 179 (365)
..+|-+++.+.. ...++++|+-......+........ -..+..+|. +. +++... ....+.+|+..
T Consensus 129 ~~~g~l~v~~~~--------~~~i~~~~~~g~~~~~~~~~~~~~~-p~~i~~~~~-g~--l~v~~~---~~~~i~~~~~~ 193 (286)
T 1q7f_A 129 DNKGRIIVVECK--------VMRVIIFDQNGNVLHKFGCSKHLEF-PNGVVVNDK-QE--IFISDN---RAHCVKVFNYE 193 (286)
T ss_dssp CTTSCEEEEETT--------TTEEEEECTTSCEEEEEECTTTCSS-EEEEEECSS-SE--EEEEEG---GGTEEEEEETT
T ss_pred eCCCCEEEEECC--------CCEEEEEcCCCCEEEEeCCCCccCC-cEEEEECCC-CC--EEEEEC---CCCEEEEEcCC
Confidence 346777777654 3679999976544444422111111 112334442 22 333332 12467777764
Q ss_pred CCceEEeeeeCCccceeeEEEE-CCEEEEEecCCC-c-EEE-EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEc
Q 040662 180 DTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSLE-A-IVA-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVV 255 (365)
Q Consensus 180 ~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~~-g-~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~ 255 (365)
...-..+...........+++. +|.+|+ .+.. + .|. ||.+......+.............+..+|+|++.. .
T Consensus 194 g~~~~~~~~~g~~~~p~~i~~d~~G~l~v--~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~--~ 269 (286)
T 1q7f_A 194 GQYLRQIGGEGITNYPIGVGINSNGEILI--ADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLAS--K 269 (286)
T ss_dssp CCEEEEESCTTTSCSEEEEEECTTCCEEE--EECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE--T
T ss_pred CCEEEEEccCCccCCCcEEEECCCCCEEE--EeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEEC--C
Confidence 4333333221111234455543 688988 7653 3 777 99765443334332211011112223478876652 3
Q ss_pred CCCceEEEEeeC
Q 040662 256 DGSGYRVFTFNR 267 (365)
Q Consensus 256 ~~~~~~V~~ld~ 267 (365)
...+.||+++.
T Consensus 270 -~~~v~v~~~~~ 280 (286)
T 1q7f_A 270 -DYRLYIYRYVQ 280 (286)
T ss_dssp -TTEEEEEECSC
T ss_pred -CCeEEEEEccc
Confidence 46788998754
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=57.75 E-value=1e+02 Score=27.36 Aligned_cols=91 Identities=10% Similarity=-0.022 Sum_probs=49.6
Q ss_pred ccEEEEcCCCCCeeeCCCCc-ccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeEE
Q 040662 121 SPLFFYSPFADQIINLPAWR-EFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNLV 199 (365)
Q Consensus 121 ~~~~l~NP~T~~~~~LP~~~-~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v 199 (365)
+.+.++|..|++...+-... .-.+..+.+ .|. +.++++.... ..+.+|+..++.-...-.. .......+.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~--s~~-~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~-~~~~v~~~~ 183 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKW--SHD-GSFLSVGLGN-----GLVDIYDVESQTKLRTMAG-HQARVGCLS 183 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEE--CTT-SSEEEEEETT-----SCEEEEETTTCCEEEEECC-CSSCEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEE--CCC-CCEEEEECCC-----CeEEEEECcCCeEEEEecC-CCCceEEEE
Confidence 68999999999875443221 112333444 442 3444443322 3677888765542221111 112344555
Q ss_pred EECCEEEEEecCCCcEEE-EEecC
Q 040662 200 CADGFLYCSFFSLEAIVA-YNVAS 222 (365)
Q Consensus 200 ~~~G~lY~~~l~~~g~i~-~d~~~ 222 (365)
+.+..++. .+.+|.|. +|+..
T Consensus 184 ~~~~~l~~--~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 184 WNRHVLSS--GSRSGAIHHHDVRI 205 (401)
T ss_dssp EETTEEEE--EETTSEEEEEETTS
T ss_pred ECCCEEEE--EcCCCCEEEEeccc
Confidence 65556655 66678888 99874
No 45
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=55.26 E-value=95 Score=26.56 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=43.5
Q ss_pred eeeEEE-ECCEEEEEecCC-CcEEE-EEecCCceeeeecCCCceeceeEEEE-eCCcEEEEEEEcCCCceEEEEeeCCCC
Q 040662 195 VKNLVC-ADGFLYCSFFSL-EAIVA-YNVASQNLEILPYPPSILFMYKYLTE-YDGSLLIFGKVVDGSGYRVFTFNRSQM 270 (365)
Q Consensus 195 ~~~~v~-~~G~lY~~~l~~-~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve-~~G~L~lV~~~~~~~~~~V~~ld~~~~ 270 (365)
...+++ -+|.+|+ .+. .+.|. +|++...-..+..+. ....+.. .+|+|++..... ....|+++|....
T Consensus 34 pegia~~~~g~lyv--~d~~~~~I~~~d~~g~~~~~~~~~~----~p~gia~~~dG~l~vad~~~--~~~~v~~~d~~~g 105 (306)
T 2p4o_A 34 LENLASAPDGTIFV--TNHEVGEIVSITPDGNQQIHATVEG----KVSGLAFTSNGDLVATGWNA--DSIPVVSLVKSDG 105 (306)
T ss_dssp EEEEEECTTSCEEE--EETTTTEEEEECTTCCEEEEEECSS----EEEEEEECTTSCEEEEEECT--TSCEEEEEECTTS
T ss_pred cceEEECCCCCEEE--EeCCCCeEEEECCCCceEEEEeCCC----CceeEEEcCCCcEEEEeccC--CcceEEEEcCCCC
Confidence 344555 3788998 874 57888 998764322233221 1122333 368876544322 2457888887666
Q ss_pred CeEEeccCC
Q 040662 271 DWFEIESLD 279 (365)
Q Consensus 271 ~W~~v~~lg 279 (365)
+...+..++
T Consensus 106 ~~~~~~~~~ 114 (306)
T 2p4o_A 106 TVETLLTLP 114 (306)
T ss_dssp CEEEEEECT
T ss_pred eEEEEEeCC
Confidence 666665553
No 46
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=54.81 E-value=1.1e+02 Score=26.64 Aligned_cols=102 Identities=18% Similarity=0.167 Sum_probs=54.0
Q ss_pred EEEEEEecCCCceEEeeee----CCccceeeEEEE-CCE-EEEEecCCC--cEEE-EEec--CCceeeeecCCCceecee
Q 040662 171 SCISICRPGDTTWTELRFQ----DNYRYVKNLVCA-DGF-LYCSFFSLE--AIVA-YNVA--SQNLEILPYPPSILFMYK 239 (365)
Q Consensus 171 ~~~~~~~~g~~~W~~~~~~----~~~~~~~~~v~~-~G~-lY~~~l~~~--g~i~-~d~~--~~~~~~i~~p~~~~~~~~ 239 (365)
..+.+|+..++..+.+... ........+++. +|+ +|+ .... +.|. |+++ +.+++.+...+. +....
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v--~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~ 309 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYA--SNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPR 309 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEE--EECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCC
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEE--ECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCc
Confidence 4577777666666555421 111123455554 676 566 5544 5676 8875 344444332111 11112
Q ss_pred EEEEe-CCcEEEEEEEcCCCceEEEEeeCCCCCeEEec
Q 040662 240 YLTEY-DGSLLIFGKVVDGSGYRVFTFNRSQMDWFEIE 276 (365)
Q Consensus 240 ~Lve~-~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~ 276 (365)
.+.-+ +|+.+++... ....+.||++|.++++-.++.
T Consensus 310 ~~~~spdg~~l~~~~~-~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 310 NFIITPNGKYLLVACR-DTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEECTTSCEEEEEET-TTTEEEEEEECTTTCCEEECS
T ss_pred eEEECCCCCEEEEEEC-CCCCEEEEEEECCCCcEeecc
Confidence 23333 6876655543 246799999998776655543
No 47
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=54.37 E-value=1e+02 Score=26.19 Aligned_cols=91 Identities=16% Similarity=0.136 Sum_probs=44.3
Q ss_pred EEEEEEecC-CCceEEeeeeCCccceeeEEEE-CCE-EEEEecCCC-cEEE-EEec--CCceeeeec-CCCceeceeEEE
Q 040662 171 SCISICRPG-DTTWTELRFQDNYRYVKNLVCA-DGF-LYCSFFSLE-AIVA-YNVA--SQNLEILPY-PPSILFMYKYLT 242 (365)
Q Consensus 171 ~~~~~~~~g-~~~W~~~~~~~~~~~~~~~v~~-~G~-lY~~~l~~~-g~i~-~d~~--~~~~~~i~~-p~~~~~~~~~Lv 242 (365)
..+.+|+.. ++..+.+...........+++. +|. +|+ .+.. +.|. ||++ +.+++.+.. +... ....+.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 90 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYV--GVRPEFRVLAYRIAPDDGALTFAAESALPG--SLTHIS 90 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEE--EETTTTEEEEEEECTTTCCEEEEEEEECSS--CCSEEE
T ss_pred CeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEE--eecCCCeEEEEEecCCCCceeeccccccCC--CCcEEE
Confidence 456666653 4444444321111123344444 555 766 6654 7777 8887 445543321 1111 112232
Q ss_pred Ee-CCcEEEEEEEcCCCceEEEEee
Q 040662 243 EY-DGSLLIFGKVVDGSGYRVFTFN 266 (365)
Q Consensus 243 e~-~G~L~lV~~~~~~~~~~V~~ld 266 (365)
-+ +|+.+++.... ...+.+|.++
T Consensus 91 ~s~dg~~l~~~~~~-~~~i~~~d~~ 114 (343)
T 1ri6_A 91 TDHQGQFVFVGSYN-AGNVSVTRLE 114 (343)
T ss_dssp ECTTSSEEEEEETT-TTEEEEEEEE
T ss_pred EcCCCCEEEEEecC-CCeEEEEECC
Confidence 22 57755554432 3457888885
No 48
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=53.82 E-value=1.1e+02 Score=26.27 Aligned_cols=218 Identities=8% Similarity=0.028 Sum_probs=103.1
Q ss_pred eEEEcCCCCceE-EEecCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCee---eCCCCccc--
Q 040662 69 CYLYDPCHKQKY-TVFNSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII---NLPAWREF-- 142 (365)
Q Consensus 69 ~~~~~~~~~~~~-~~~l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~---~LP~~~~~-- 142 (365)
..++|+.+++.. .++. +.....-.+...++.+++.... .+.+.++|+.|++.+ .++.....
T Consensus 71 v~~~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 137 (353)
T 3vgz_A 71 VYRLDPVTLEVTQAIHN-----DLKPFGATINNTTQTLWFGNTV--------NSAVTAIDAKTGEVKGRLVLDDRKRTEE 137 (353)
T ss_dssp EEEECTTTCCEEEEEEE-----SSCCCSEEEETTTTEEEEEETT--------TTEEEEEETTTCCEEEEEESCCCCCCSS
T ss_pred EEEEcCCCCeEEEEEec-----CCCcceEEECCCCCEEEEEecC--------CCEEEEEeCCCCeeEEEEecCCCccccc
Confidence 356676665433 3333 2111222344556667766664 368999999999863 23221110
Q ss_pred ----ceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEE-eeeeCCccceeeEEEE-CC-EEEEEecCCCcE
Q 040662 143 ----SIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTE-LRFQDNYRYVKNLVCA-DG-FLYCSFFSLEAI 215 (365)
Q Consensus 143 ----~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~-~~~~~~~~~~~~~v~~-~G-~lY~~~l~~~g~ 215 (365)
....+.+ +|. ++++++.... ....+.+++..+..=.. ++.. ......+++. +| .+|+ .+..+.
T Consensus 138 ~~~~~~~~~~~--s~d-g~~l~~~~~~---~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~--~~~~~~ 207 (353)
T 3vgz_A 138 VRPLQPRELVA--DDA-TNTVYISGIG---KESVIWVVDGGNIKLKTAIQNT--GKMSTGLALDSEGKRLYT--TNADGE 207 (353)
T ss_dssp CCCCEEEEEEE--ETT-TTEEEEEEES---SSCEEEEEETTTTEEEEEECCC--CTTCCCCEEETTTTEEEE--ECTTSE
T ss_pred cCCCCCceEEE--CCC-CCEEEEEecC---CCceEEEEcCCCCceEEEecCC--CCccceEEECCCCCEEEE--EcCCCe
Confidence 0122333 443 3444433322 22467788876553221 1111 1123344444 44 5777 777788
Q ss_pred EE-EEecCCcee-eeecCCCc-eeceeEEEEe-CCcEEEEEEEcCCCceEEEEeeCCCCCeEEeccCCCe-EEEeccCCC
Q 040662 216 VA-YNVASQNLE-ILPYPPSI-LFMYKYLTEY-DGSLLIFGKVVDGSGYRVFTFNRSQMDWFEIESLDDR-VLFTGASCL 290 (365)
Q Consensus 216 i~-~d~~~~~~~-~i~~p~~~-~~~~~~Lve~-~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~~lg~~-~lfvg~~~~ 290 (365)
|. +|+.+.+.. .+...... .....-+.-+ +|+.+++.... .-.|+.+|..+.+..+.-.++.. .+-
T Consensus 208 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~------ 278 (353)
T 3vgz_A 208 LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---AAEVLVVDTRNGNILAKVAAPESLAVL------ 278 (353)
T ss_dssp EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---SSEEEEEETTTCCEEEEEECSSCCCEE------
T ss_pred EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---CCEEEEEECCCCcEEEEEEcCCCceEE------
Confidence 88 998775422 23321110 0111112222 57655544322 22455556555554443333321 110
Q ss_pred CCCCCCCeEEEeeeCCCceEEEEcCceee
Q 040662 291 WVPVEKGSAFANTVHWFGRYSYIRDVCRE 319 (365)
Q Consensus 291 ~~~~~~n~IYf~~~~~~~~~vy~l~~~~~ 319 (365)
+.-.++.+|+.........+|++++++.
T Consensus 279 -~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 279 -FNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp -EETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred -ECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 1124566777764334456777776654
No 49
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=53.70 E-value=1e+02 Score=26.15 Aligned_cols=143 Identities=11% Similarity=0.067 Sum_probs=73.3
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecC
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPG 179 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g 179 (365)
...+.+++.... .+.+.++|+.|++....-.. ..... .+..+|. ++++++.... ...+.+++..
T Consensus 7 ~~~~~~~v~~~~--------~~~v~~~d~~~~~~~~~~~~-~~~~~--~~~~s~d-g~~l~~~~~~----~~~i~~~d~~ 70 (331)
T 3u4y_A 7 TTSNFGIVVEQH--------LRRISFFSTDTLEILNQITL-GYDFV--DTAITSD-CSNVVVTSDF----CQTLVQIETQ 70 (331)
T ss_dssp CCCCEEEEEEGG--------GTEEEEEETTTCCEEEEEEC-CCCEE--EEEECSS-SCEEEEEEST----TCEEEEEECS
T ss_pred CCCCEEEEEecC--------CCeEEEEeCcccceeeeEEc-cCCcc--eEEEcCC-CCEEEEEeCC----CCeEEEEECC
Confidence 345666666555 36899999999987543222 11112 3444553 3444443332 2377888877
Q ss_pred CCce--EEeeeeCCccceee-EEEE-CCE-EEEEecCCC-c--EEE-EEecCCce-eeeecCCCceeceeEEEEe-CCcE
Q 040662 180 DTTW--TELRFQDNYRYVKN-LVCA-DGF-LYCSFFSLE-A--IVA-YNVASQNL-EILPYPPSILFMYKYLTEY-DGSL 248 (365)
Q Consensus 180 ~~~W--~~~~~~~~~~~~~~-~v~~-~G~-lY~~~l~~~-g--~i~-~d~~~~~~-~~i~~p~~~~~~~~~Lve~-~G~L 248 (365)
++.- ..+... ..... +++. +|. +|+ .... + .|. +|+.+.+. ..++... ....+.-+ +|+.
T Consensus 71 ~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~--~~~~~~~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~spdg~~ 141 (331)
T 3u4y_A 71 LEPPKVVAIQEG---QSSMADVDITPDDQFAVT--VTGLNHPFNMQSYSFLKNKFISTIPIPY----DAVGIAISPNGNG 141 (331)
T ss_dssp SSSCEEEEEEEC---SSCCCCEEECTTSSEEEE--CCCSSSSCEEEEEETTTTEEEEEEECCT----TEEEEEECTTSSC
T ss_pred CCceeEEecccC---CCCccceEECCCCCEEEE--ecCCCCcccEEEEECCCCCeEEEEECCC----CccceEECCCCCE
Confidence 6653 222211 12233 4554 454 555 4444 2 787 99976543 2222211 11233333 5764
Q ss_pred EEEEEEcCCCc-eEEEEeeCC
Q 040662 249 LIFGKVVDGSG-YRVFTFNRS 268 (365)
Q Consensus 249 ~lV~~~~~~~~-~~V~~ld~~ 268 (365)
+++.... ... +.+|.++..
T Consensus 142 l~~~~~~-~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 142 LILIDRS-SANTVRRFKIDAD 161 (331)
T ss_dssp EEEEEET-TTTEEEEEEECTT
T ss_pred EEEEecC-CCceEEEEEECCC
Confidence 4444443 345 889998753
No 50
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=53.08 E-value=1.2e+02 Score=26.65 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=57.6
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCCCCCee---eCCCCcccceeEEEEecCCC-CCCeEEEEEeCCCcCeEEEEE
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII---NLPAWREFSIAKATFSATPI-SPDCVVFVTWVGIMEISCISI 175 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~---~LP~~~~~~~~~~~ls~~p~-s~~~~v~v~~~~~~~~~~~~~ 175 (365)
..+|.|++.... +.++.+|+.||+.+ .++.. . . ..|. .++ .|++... ...+..
T Consensus 101 ~~~~~v~v~~~~---------g~l~a~d~~tG~~~W~~~~~~~--~-~------~~p~~~~~-~v~v~~~----~g~l~~ 157 (376)
T 3q7m_A 101 VSGGHVYIGSEK---------AQVYALNTSDGTVAWQTKVAGE--A-L------SRPVVSDG-LVLIHTS----NGQLQA 157 (376)
T ss_dssp EETTEEEEEETT---------SEEEEEETTTCCEEEEEECSSC--C-C------SCCEEETT-EEEEECT----TSEEEE
T ss_pred EeCCEEEEEcCC---------CEEEEEECCCCCEEEEEeCCCc--e-E------cCCEEECC-EEEEEcC----CCeEEE
Confidence 347888877654 67999999999853 33321 1 0 0111 122 2333321 235666
Q ss_pred EecC--CCceEEeeeeCC--ccceeeEEEECCEEEEEecCCCcEEE-EEecCC--ceee
Q 040662 176 CRPG--DTTWTELRFQDN--YRYVKNLVCADGFLYCSFFSLEAIVA-YNVASQ--NLEI 227 (365)
Q Consensus 176 ~~~g--~~~W~~~~~~~~--~~~~~~~v~~~G~lY~~~l~~~g~i~-~d~~~~--~~~~ 227 (365)
++.. ...|+.-..... .......+..+|.+|+ -+..|.+. +|+.+. .|+.
T Consensus 158 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~--g~~~g~l~~~d~~tG~~~w~~ 214 (376)
T 3q7m_A 158 LNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVV--GGDNGRVSAVLMEQGQMIWQQ 214 (376)
T ss_dssp EETTTCCEEEEEECCC-----CCCCCCEEETTEEEE--CCTTTEEEEEETTTCCEEEEE
T ss_pred EECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEE--EcCCCEEEEEECCCCcEEEEE
Confidence 7754 446876542211 1112445667899988 77778888 998765 3543
No 51
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=50.03 E-value=2e+02 Score=28.37 Aligned_cols=191 Identities=9% Similarity=-0.038 Sum_probs=85.0
Q ss_pred EEccCCeEEEeccccccCCCCccccEEEEcCCC----CCee-eCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEE
Q 040662 98 LDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFA----DQII-NLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISC 172 (365)
Q Consensus 98 ~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T----~~~~-~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~ 172 (365)
+...+|.|++++.. ...++.+++-+ .... .++.- +. .-..++.++..+..+++ .. ....
T Consensus 413 ~d~~~~~Ly~sD~~--------~~~I~~~~~~g~~~~~~~~~~i~~~--~~-~P~glavD~~~g~LY~t--D~---~~~~ 476 (699)
T 1n7d_A 413 TEVASNRIYWSDLS--------QRMICSTQLDRAHGVSSYDTVISRD--IQ-APDGLAVDWIHSNIYWT--DS---VLGT 476 (699)
T ss_dssp EETTTTEEEECCTT--------TTSBEEEESCCCCC-CCCCCBCCSC--C---CCCEECCCSSSBCEEC--CT---TTSC
T ss_pred cccccCeEEEEecC--------CCeEEEEecCCCCCCcceEEEEeCC--CC-CcceEEEEeeCCcEEEE--ec---cCCe
Confidence 44557888888776 36788888775 1211 11110 00 00113334332222221 11 1123
Q ss_pred EEEEecCCCceEEeeeeCCccceeeEEEE--CCEEEEEecCCC--cEEE-EEecCCceeeeecCCCceeceeEEEEe--C
Q 040662 173 ISICRPGDTTWTELRFQDNYRYVKNLVCA--DGFLYCSFFSLE--AIVA-YNVASQNLEILPYPPSILFMYKYLTEY--D 245 (365)
Q Consensus 173 ~~~~~~g~~~W~~~~~~~~~~~~~~~v~~--~G~lY~~~l~~~--g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~--~ 245 (365)
+.+++.....-+.+... .......+++. +|.+|| .+.. +.|. ++++....+.+..... ....-|... +
T Consensus 477 I~v~d~dg~~~~~l~~~-~~~~P~giavDp~~g~ly~--td~~~~~~I~~~~~dG~~~~~l~~~~l--~~PnGlavd~~~ 551 (699)
T 1n7d_A 477 VSVADTKGVKRKTLFRE-QGSKPRAIVVDPVHGFMYW--TDWGTPAKIKKGGLNGVDIYSLVTENI--QWPNGITLDLLS 551 (699)
T ss_dssp EEEEBSSSCCEEEECCC-SSCCCCCEECCSSSSCCEE--CCCSSSCCEEBCCSSSCCCCEESCSSC--SSCCCEEECTTT
T ss_pred EEEEecCCCceEEEEeC-CCCCcceEEEccCCCcEEE--cccCCCCeEEEEeCCCCCeeEEEeCCC--CCccEEEEeccC
Confidence 45555443322222111 12233455553 689998 7752 6787 8886543332221110 011123322 4
Q ss_pred CcEEEEEEEcCCCceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCCC--CCCCeEEEeeeCCCceEEEEcCceee
Q 040662 246 GSLLIFGKVVDGSGYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWVP--VEKGSAFANTVHWFGRYSYIRDVCRE 319 (365)
Q Consensus 246 G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~--~~~n~IYf~~~~~~~~~vy~l~~~~~ 319 (365)
|+|+++... .-.|++++..+..-..+...+. ..-.-++ +.++.||+++........++..+++.
T Consensus 552 ~~LY~aD~~----~~~I~~~d~dG~~~~~~~~~~~------~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 552 GRLYWVDSK----LHSISSIDVNGGNRKTILEDEK------RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp CCEEEEETT----TTEEEEECSSSSCCEEECCCSS------SCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEE
T ss_pred CEEEEEecC----CCeEEEEccCCCceEEEEecCC------cCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCc
Confidence 677765522 2356666654322122111100 0001123 36779999885433456777666654
No 52
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=47.47 E-value=1.4e+02 Score=25.97 Aligned_cols=131 Identities=13% Similarity=0.038 Sum_probs=67.9
Q ss_pred CceEEEcCCCCceEE-EecCCCCCCCCCCCeEE-Ecc-CCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccc
Q 040662 67 HSCYLYDPCHKQKYT-VFNSDKNRTTLLGARPL-DSK-HGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFS 143 (365)
Q Consensus 67 ~~~~~~~~~~~~~~~-~~l~~~~~P~~~~~~~~-~s~-~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~ 143 (365)
+...++|..+++... +.. . .....+ -+. +..|++.... .+.+.++|+.|++.+..-.... .
T Consensus 12 ~~v~v~d~~~~~~~~~~~~-----~--~~~~~~~~s~dg~~l~~~~~~--------d~~i~v~d~~~~~~~~~~~~~~-~ 75 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPV-----G--SNPMGAVISPDGTKVYVANAH--------SNDVSIIDTATNNVIATVPAGS-S 75 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC-----S--SSEEEEEECTTSSEEEEEEGG--------GTEEEEEETTTTEEEEEEECSS-S
T ss_pred CEEEEEECCCCeEEEEeec-----C--CCcceEEECCCCCEEEEECCC--------CCeEEEEECCCCeEEEEEECCC-C
Confidence 455788887776443 322 1 112222 233 4456555543 3689999999998654322212 2
Q ss_pred eeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEE-CCE-EEEEecC-CCcEEE-EE
Q 040662 144 IAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCA-DGF-LYCSFFS-LEAIVA-YN 219 (365)
Q Consensus 144 ~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~-~G~-lY~~~l~-~~g~i~-~d 219 (365)
...+.+ .|. +.++++... ....+.+++..++.-...-.. ......+++. +|+ +|+ .. ..+.|. +|
T Consensus 76 v~~~~~--spd-g~~l~~~~~----~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~--~~~~~~~v~~~d 144 (391)
T 1l0q_A 76 PQGVAV--SPD-GKQVYVTNM----ASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYV--TNNGDKTVSVIN 144 (391)
T ss_dssp EEEEEE--CTT-SSEEEEEET----TTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEE--EETTTTEEEEEE
T ss_pred ccceEE--CCC-CCEEEEEEC----CCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEE--EeCCCCEEEEEE
Confidence 333334 443 344444332 224688888876654322211 1123455554 454 554 43 357788 99
Q ss_pred ecCCc
Q 040662 220 VASQN 224 (365)
Q Consensus 220 ~~~~~ 224 (365)
+.+.+
T Consensus 145 ~~~~~ 149 (391)
T 1l0q_A 145 TVTKA 149 (391)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 87654
No 53
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=44.30 E-value=1.7e+02 Score=26.04 Aligned_cols=103 Identities=10% Similarity=0.029 Sum_probs=50.4
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcc--cceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEe
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWRE--FSIAKATFSATPISPDCVVFVTWVGIMEISCISICR 177 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~--~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~ 177 (365)
|++++|.+... +.++|||..|++...+-.+.. -.+..+.+ .|. +.+++. ... ...+.+|+
T Consensus 114 S~~n~lAvgld----------~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~f--spd-g~~las-gs~----Dg~v~iWd 175 (420)
T 4gga_A 114 SSGNVLAVALD----------NSVYLWSASSGDILQLLQMEQPGEYISSVAW--IKE-GNYLAV-GTS----SAEVQLWD 175 (420)
T ss_dssp CTTSEEEEEET----------TEEEEEETTTCCEEEEEECCSTTCCEEEEEE--CTT-SSEEEE-EET----TSCEEEEE
T ss_pred CCCCEEEEEeC----------CEEEEEECCCCCEEEEEEecCCCCcEEEEEE--CCC-CCEEEE-EEC----CCeEEEEE
Confidence 34666655432 589999999998765433211 12334444 442 344443 332 24677788
Q ss_pred cCCCceEEeeeeCCccceeeEEEECCEEEEEecCCCcEEE-EEecCC
Q 040662 178 PGDTTWTELRFQDNYRYVKNLVCADGFLYCSFFSLEAIVA-YNVASQ 223 (365)
Q Consensus 178 ~g~~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~~g~i~-~d~~~~ 223 (365)
..++.-......+ ......+...+..+.. -+..+.+. +|....
T Consensus 176 ~~~~~~~~~~~~h-~~~v~~~s~~~~~l~s--gs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 176 VQQQKRLRNMTSH-SARVGSLSWNSYILSS--GSRSGHIHHHDVRVA 219 (420)
T ss_dssp TTTTEEEEEECCC-SSCEEEEEEETTEEEE--EETTSEEEEEETTSS
T ss_pred cCCCcEEEEEeCC-CCceEEEeeCCCEEEE--EeCCCceeEeeeccc
Confidence 7665422111111 1112233333333333 34456676 777553
No 54
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=44.15 E-value=1.3e+02 Score=26.15 Aligned_cols=96 Identities=11% Similarity=0.149 Sum_probs=55.6
Q ss_pred EEecCC--CceEEeeeeC--CccceeeEEEECCEEEEEecCCCcEEEEEec-CCceeeeecCCCceeceeEEEE-eCCcE
Q 040662 175 ICRPGD--TTWTELRFQD--NYRYVKNLVCADGFLYCSFFSLEAIVAYNVA-SQNLEILPYPPSILFMYKYLTE-YDGSL 248 (365)
Q Consensus 175 ~~~~g~--~~W~~~~~~~--~~~~~~~~v~~~G~lY~~~l~~~g~i~~d~~-~~~~~~i~~p~~~~~~~~~Lve-~~G~L 248 (365)
++++.| .+|+.+..+. ....+..+.+.++.+|+ +...|.|..-.+ ..+|+.+..+.........+.. .+|++
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~--~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~ 135 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWI--VGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSA 135 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEE--EEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEE--EECCCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCE
Confidence 455544 5899986532 12245677777889988 877776653333 4689887654211001112333 35776
Q ss_pred EEEEEEcCCCceEEEEeeCCCCCeEEecc
Q 040662 249 LIFGKVVDGSGYRVFTFNRSQMDWFEIES 277 (365)
Q Consensus 249 ~lV~~~~~~~~~~V~~ld~~~~~W~~v~~ 277 (365)
+++.. .=.||+-+.....|.++..
T Consensus 136 ~~~~~-----~g~v~~S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 136 EMITN-----VGAIYRTKDSGKNWQALVQ 159 (327)
T ss_dssp EEEET-----TCCEEEESSTTSSEEEEEC
T ss_pred EEEeC-----CccEEEEcCCCCCCEEeec
Confidence 66542 1147777766788998764
No 55
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=42.64 E-value=2.3e+02 Score=27.02 Aligned_cols=185 Identities=11% Similarity=-0.027 Sum_probs=93.6
Q ss_pred ccEEEEcCCC------CCeeeCC-CCcccceeEEEEecCCCCCCeEEEEEeCCC---cCeEEEEEEecC-CC---ceEEe
Q 040662 121 SPLFFYSPFA------DQIINLP-AWREFSIAKATFSATPISPDCVVFVTWVGI---MEISCISICRPG-DT---TWTEL 186 (365)
Q Consensus 121 ~~~~l~NP~T------~~~~~LP-~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~---~~~~~~~~~~~g-~~---~W~~~ 186 (365)
..++++|..+ ++...|. .- .-....+.+ +|+ ++++++...... .....+.+++.. ++ ..+.+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~--SpD-G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDA-HRFVTGPRL--SPD-GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSC-SSEECCCEE--CTT-SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecC-CCcccCceE--CCC-CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 5799999998 7766665 32 111222233 342 456666554321 022578888877 56 44444
Q ss_pred eeeCCccceeeEEEE-CCEEEEEecCC-Cc--EEE-EEecCCceeeeecCC-----Cceec-eeEEEEe-CCcEEEEEEE
Q 040662 187 RFQDNYRYVKNLVCA-DGFLYCSFFSL-EA--IVA-YNVASQNLEILPYPP-----SILFM-YKYLTEY-DGSLLIFGKV 254 (365)
Q Consensus 187 ~~~~~~~~~~~~v~~-~G~lY~~~l~~-~g--~i~-~d~~~~~~~~i~~p~-----~~~~~-~~~Lve~-~G~L~lV~~~ 254 (365)
.... ......+.+. ||++|+ .+. .| .|. +|+++.++..+.... +.+.. ...+.-+ +|++++...
T Consensus 237 ~~~~-~~~~~~~~~spdg~l~~--~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~- 312 (662)
T 3azo_A 237 LGGP-EEAIAQAEWAPDGSLIV--ATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG- 312 (662)
T ss_dssp EEET-TBCEEEEEECTTSCEEE--EECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB-
T ss_pred CCCC-CceEcceEECCCCeEEE--EECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE-
Confidence 3221 1124455555 788876 654 34 677 887665554332111 11100 1123333 577665443
Q ss_pred cCCCceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCCCCCCCeEEEeeeCCCc---eEEEEcCceeeee
Q 040662 255 VDGSGYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWVPVEKGSAFANTVHWFG---RYSYIRDVCREFI 321 (365)
Q Consensus 255 ~~~~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~~~~n~IYf~~~~~~~---~~vy~l~~~~~~~ 321 (365)
. ...+||.+|.++.+...+..-.+..--+. ...++.++|...+... ...+++++++...
T Consensus 313 -~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~------s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 313 -K-GAAVLGILDPESGELVDAAGPWTEWAATL------TVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp -S-SSCEEEEEETTTTEEEECCSSCCEEEEEE------EEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred -c-CccEEEEEECCCCcEEEecCCCCeEEEEE------ecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 2 57899999987666555542222211110 1346677776543221 2344565665443
No 56
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=42.46 E-value=1.7e+02 Score=25.32 Aligned_cols=119 Identities=13% Similarity=0.046 Sum_probs=62.9
Q ss_pred eeeEEEE-CCE-EEEEecCC-CcEEE-EEecCCceeeee---cCCCceeceeEEEEe-CCcEEEEEEEcCCCceEEEEee
Q 040662 195 VKNLVCA-DGF-LYCSFFSL-EAIVA-YNVASQNLEILP---YPPSILFMYKYLTEY-DGSLLIFGKVVDGSGYRVFTFN 266 (365)
Q Consensus 195 ~~~~v~~-~G~-lY~~~l~~-~g~i~-~d~~~~~~~~i~---~p~~~~~~~~~Lve~-~G~L~lV~~~~~~~~~~V~~ld 266 (365)
...+++. +|+ +|+ .+. .+.|. +|+.+.++..+. ..+........+.-+ +|+.+++........+.||.++
T Consensus 213 ~~~~~~spdg~~l~v--~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 213 PRHLIFNSDGKFAYL--INEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEECTTSSEEEE--EETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CeEEEEcCCCCEEEE--EcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 4455665 675 666 664 56777 998766554332 111111111233333 6886655543213579999998
Q ss_pred CCCCCeEEeccCCCeEEEeccCCCC--CCCCCCeEEEeeeCCCceEEEEcC--ceeee
Q 040662 267 RSQMDWFEIESLDDRVLFTGASCLW--VPVEKGSAFANTVHWFGRYSYIRD--VCREF 320 (365)
Q Consensus 267 ~~~~~W~~v~~lg~~~lfvg~~~~~--~~~~~n~IYf~~~~~~~~~vy~l~--~~~~~ 320 (365)
....++..+..+.. |..-.. +.-.++.||+.........+|.++ +++..
T Consensus 291 ~~~g~~~~~~~~~~-----g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 291 ETNGTLTKVGYQLT-----GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLT 343 (361)
T ss_dssp TTTCCEEEEEEEEC-----SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCCcEEEeeEecC-----CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEe
Confidence 76667666654431 111001 112566788876433345676544 55544
No 57
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=41.79 E-value=1.5e+02 Score=24.51 Aligned_cols=166 Identities=10% Similarity=-0.021 Sum_probs=81.9
Q ss_pred eEEEcCCCCceEEEecCCCCCCC-CCCC-eEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCeee--CCCCcccce
Q 040662 69 CYLYDPCHKQKYTVFNSDKNRTT-LLGA-RPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIIN--LPAWREFSI 144 (365)
Q Consensus 69 ~~~~~~~~~~~~~~~l~~~~~P~-~~~~-~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~--LP~~~~~~~ 144 (365)
...+|+. ++...+.+ |. .... .+.-..+|-+++.+.. ...++.+||- ++... +|.. ..
T Consensus 85 v~~~d~~-g~~~~~~~-----~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~~-g~~~~~~~~~~--~~- 146 (300)
T 2qc5_A 85 IGKLSKK-GGFTEYPL-----PQPDSGPYGITEGLNGDIWFTQLN--------GDRIGKLTAD-GTIYEYDLPNK--GS- 146 (300)
T ss_dssp EEEECTT-SCEEEEEC-----SSTTCCEEEEEECSTTCEEEEETT--------TTEEEEECTT-SCEEEEECSST--TC-
T ss_pred EEEECCC-CCeEEecC-----CCCCCCCccceECCCCCEEEEccC--------CCeEEEECCC-CCEEEccCCCC--CC-
Confidence 3566766 55544444 32 1111 1222346777776653 2578899997 66543 3421 11
Q ss_pred eEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEE-CCEEEEEecCC-CcEEE-EEec
Q 040662 145 AKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSL-EAIVA-YNVA 221 (365)
Q Consensus 145 ~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~-~g~i~-~d~~ 221 (365)
....+..++. +. +++.... ...+..++. ++....+..+........+++. +|.+|+ .+. .+.|. +|+
T Consensus 147 ~~~~i~~d~~-g~--l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v--~~~~~~~i~~~~~- 216 (300)
T 2qc5_A 147 YPAFITLGSD-NA--LWFTENQ---NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWF--VEIMGNKIGRITT- 216 (300)
T ss_dssp CEEEEEECTT-SS--EEEEETT---TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEE--EETTTTEEEEECT-
T ss_pred CceeEEECCC-CC--EEEEecC---CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEE--EccCCCEEEEEcC-
Confidence 1122334443 23 3333321 235667777 6666655433222234455554 688988 765 35677 998
Q ss_pred CCceeeeecCCCceeceeEEEE-eCCcEEEEEEEcCCCceEEEEeeC
Q 040662 222 SQNLEILPYPPSILFMYKYLTE-YDGSLLIFGKVVDGSGYRVFTFNR 267 (365)
Q Consensus 222 ~~~~~~i~~p~~~~~~~~~Lve-~~G~L~lV~~~~~~~~~~V~~ld~ 267 (365)
+.++..+..+... .....+.. .+|+|++.... .-.|.++|.
T Consensus 217 ~g~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~~----~~~i~~~~~ 258 (300)
T 2qc5_A 217 TGEISEYDIPTPN-ARPHAITAGKNSEIWFTEWG----ANQIGRITN 258 (300)
T ss_dssp TCCEEEEECSSTT-CCEEEEEECSTTCEEEEETT----TTEEEEECT
T ss_pred CCcEEEEECCCCC-CCceEEEECCCCCEEEeccC----CCeEEEECC
Confidence 4444444333211 11122333 36887665421 225666665
No 58
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=39.61 E-value=2e+02 Score=25.32 Aligned_cols=201 Identities=11% Similarity=0.061 Sum_probs=94.4
Q ss_pred hhhhcchhhHHhhccCC-----CCCceEEEeeCCceEEEcCCCCceEEEecCCCCCCCCCCCe--EEEccCCeEEEeccc
Q 040662 39 RFRAVCKRWRAADIQSR-----DKFPWLMGYNSHSCYLYDPCHKQKYTVFNSDKNRTTLLGAR--PLDSKHGWVLFEGEK 111 (365)
Q Consensus 39 r~r~VCk~Wrs~~~~~~-----~~~P~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~~~~~--~~~s~~G~l~~~~~~ 111 (365)
.++|.|..=..+..+.+ .+.|+|++........+++...... ..+ +.+.... -+...+|.|+.++..
T Consensus 20 ~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~-~~~-----~~~~~~~~l~~d~~~~~ly~~D~~ 93 (349)
T 3v64_C 20 AFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYT-LLL-----NNLENAIALDFHHRRELVFWSDVT 93 (349)
T ss_dssp -CCEECCTTEEECTTSSCEEESSSCCEEEEECBSCEEEECTTSCCEE-EEE-----CSCSCEEEEEEETTTTEEEEEETT
T ss_pred CeEEECCCCccCCCCCCcccccccCceeEeecccceEEEeCCCCeeE-Eee-----cCCCceEEEEEeccccEEEEEecc
Confidence 45666655444433222 2467766654444445565443332 222 2222211 133467888888876
Q ss_pred cccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCC
Q 040662 112 NVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDN 191 (365)
Q Consensus 112 ~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~ 191 (365)
...++.+++.++....+... .+.. -..++.++..+ .+.+ ... ....+.+++.....-+.+.. ..
T Consensus 94 --------~~~I~r~~~~g~~~~~~~~~-~~~~-p~glavd~~~g-~ly~-~d~---~~~~I~~~~~dG~~~~~l~~-~~ 157 (349)
T 3v64_C 94 --------LDRILRANLNGSNVEEVVST-GLES-PGGLAVDWVHD-KLYW-TDS---GTSRIEVANLDGAHRKVLLW-QS 157 (349)
T ss_dssp --------TTEEEEEETTSCSCEEEECS-SCSC-CCEEEEETTTT-EEEE-EET---TTTEEEEEETTSCSCEEEEC-TT
T ss_pred --------CCceEEEecCCCCceEEEeC-CCCC-ccEEEEecCCC-eEEE-EcC---CCCeEEEEcCCCCceEEEEe-CC
Confidence 36788899887764433211 1110 01223343322 2222 222 12355566654332222221 12
Q ss_pred ccceeeEEEE--CCEEEEEecCCC--cEEE-EEecCCceeeeecCCCceeceeEEEEe--CCcEEEEEEEcCCCceEEEE
Q 040662 192 YRYVKNLVCA--DGFLYCSFFSLE--AIVA-YNVASQNLEILPYPPSILFMYKYLTEY--DGSLLIFGKVVDGSGYRVFT 264 (365)
Q Consensus 192 ~~~~~~~v~~--~G~lY~~~l~~~--g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~--~G~L~lV~~~~~~~~~~V~~ 264 (365)
.....++++. +|.+|| .+.. +.|. ++++...-+.+-... .....-|.-. +|+|+.+... .-.|++
T Consensus 158 l~~P~~iavdp~~g~ly~--td~~~~~~I~r~~~dG~~~~~~~~~~--~~~PnGla~d~~~~~lY~aD~~----~~~I~~ 229 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYW--TDWGNTPRIEASSMDGSGRRIIADTH--LFWPNGLTIDYAGRRMYWVDAK----HHVIER 229 (349)
T ss_dssp CSCEEEEEEETTTTEEEE--EECSSSCEEEEEETTSCSCEESCCSS--CSCEEEEEEETTTTEEEEEETT----TTEEEE
T ss_pred CCCcceEEEecCcCeEEE--eccCCCCEEEEEeCCCCCcEEEEECC--CCCcceEEEeCCCCEEEEEECC----CCEEEE
Confidence 3345677776 799999 7653 6788 998764333221111 0111223332 5666665432 225666
Q ss_pred eeCCC
Q 040662 265 FNRSQ 269 (365)
Q Consensus 265 ld~~~ 269 (365)
+|.++
T Consensus 230 ~~~dG 234 (349)
T 3v64_C 230 ANLDG 234 (349)
T ss_dssp EETTS
T ss_pred EeCCC
Confidence 66543
No 59
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=35.53 E-value=1.9e+02 Score=23.85 Aligned_cols=149 Identities=12% Similarity=0.060 Sum_probs=73.8
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecC
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPG 179 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g 179 (365)
..+|-|.+.+.. .+.+.++|+. ++...++...... ....+..++. +. +++... ....+..+++.
T Consensus 28 d~~g~l~v~~~~--------~~~v~~~~~~-~~~~~~~~~~~~~-~~~~i~~~~~-g~--l~v~~~---~~~~v~~~d~~ 91 (300)
T 2qc5_A 28 SEDGKVWFTQHK--------ANKISSLDQS-GRIKEFEVPTPDA-KVMCLIVSSL-GD--IWFTEN---GANKIGKLSKK 91 (300)
T ss_dssp CTTSCEEEEETT--------TTEEEEECTT-SCEEEEECSSTTC-CEEEEEECTT-SC--EEEEET---TTTEEEEECTT
T ss_pred CCCCCEEEEcCC--------CCeEEEECCC-CceEEEECCCCCC-cceeEEECCC-CC--EEEEec---CCCeEEEECCC
Confidence 346777777654 3679999998 6654432211111 1112333432 22 222332 12356677766
Q ss_pred CCceEEeeeeCCccceeeEEEE-CCEEEEEecCC-CcEEE-EEecCCceeeeecCCCceeceeEEEE-eCCcEEEEEEEc
Q 040662 180 DTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSL-EAIVA-YNVASQNLEILPYPPSILFMYKYLTE-YDGSLLIFGKVV 255 (365)
Q Consensus 180 ~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~-~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve-~~G~L~lV~~~~ 255 (365)
+..+.+..+........+++. +|.+|+ .+. .+.|. +|++ .+...+..+... .....+.. .+|+|++...
T Consensus 92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v--~~~~~~~i~~~~~~-g~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~-- 164 (300)
T 2qc5_A 92 -GGFTEYPLPQPDSGPYGITEGLNGDIWF--TQLNGDRIGKLTAD-GTIYEYDLPNKG-SYPAFITLGSDNALWFTEN-- 164 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECSTTCEEE--EETTTTEEEEECTT-SCEEEEECSSTT-CCEEEEEECTTSSEEEEET--
T ss_pred -CCeEEecCCCCCCCCccceECCCCCEEE--EccCCCeEEEECCC-CCEEEccCCCCC-CCceeEEECCCCCEEEEec--
Confidence 666655443222234455554 689988 765 46777 9987 444433333211 11223333 3577665332
Q ss_pred CCCceEEEEeeCCCCCeEE
Q 040662 256 DGSGYRVFTFNRSQMDWFE 274 (365)
Q Consensus 256 ~~~~~~V~~ld~~~~~W~~ 274 (365)
..-.|+++|. ..+...
T Consensus 165 --~~~~i~~~~~-~g~~~~ 180 (300)
T 2qc5_A 165 --QNNSIGRITN-TGKLEE 180 (300)
T ss_dssp --TTTEEEEECT-TCCEEE
T ss_pred --CCCeEEEECC-CCcEEE
Confidence 1225666665 344443
No 60
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=35.21 E-value=2.2e+02 Score=24.61 Aligned_cols=181 Identities=10% Similarity=-0.006 Sum_probs=0.0
Q ss_pred CCccccEEEEcCCCCCeeeCCCCcccceeEEEEec-CCCCCCeEEEEEeCCCcCe----EEEEEEecCCCceEEeeeeCC
Q 040662 117 GRKCSPLFFYSPFADQIINLPAWREFSIAKATFSA-TPISPDCVVFVTWVGIMEI----SCISICRPGDTTWTELRFQDN 191 (365)
Q Consensus 117 ~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~-~p~s~~~~v~v~~~~~~~~----~~~~~~~~g~~~W~~~~~~~~ 191 (365)
+.....++++|..+++...+... ...+..+.++. + +..++++... .. ..+..++.....++.+.....
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~sp~d---g~~l~~~~~~---~~~~~~~~l~~~d~~~~~~~~l~~~~~ 236 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIHQD-TAWLGHPIYRPFD---DSTVGFCHEG---PHDLVDARMWLVNEDGSNVRKIKEHAE 236 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEEEE-SSCEEEEEEETTE---EEEEEEEECS---CSSSCSCCCEEEETTSCCCEESSCCCT
T ss_pred CCCcceEEEEECCCCcEEeeccC-CcccccceECCCC---CCEEEEEecC---CCCCCCceEEEEECCCCceeEeeccCC
Q ss_pred ccceeeEEEE-CCE-EEEEecCCC-----cEEE-EEecCCceeeeecCCCceeceeEEEEe-CCcEEEEEE---------
Q 040662 192 YRYVKNLVCA-DGF-LYCSFFSLE-----AIVA-YNVASQNLEILPYPPSILFMYKYLTEY-DGSLLIFGK--------- 253 (365)
Q Consensus 192 ~~~~~~~v~~-~G~-lY~~~l~~~-----g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~-~G~L~lV~~--------- 253 (365)
......+.+. +|+ +++ .... +.|. +|+.+.....+...+... ....- +|++++...
T Consensus 237 ~~~~~~~~~spdg~~l~~--~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~----~~~s~~dg~~l~~~~~~~p~~~~~ 310 (396)
T 3c5m_A 237 GESCTHEFWIPDGSAMAY--VSYFKGQTDRVIYKANPETLENEEVMVMPPCS----HLMSNFDGSLMVGDGCDAPVDVAD 310 (396)
T ss_dssp TEEEEEEEECTTSSCEEE--EEEETTTCCEEEEEECTTTCCEEEEEECCSEE----EEEECSSSSEEEEEECCC------
T ss_pred CccccceEECCCCCEEEE--EecCCCCccceEEEEECCCCCeEEeeeCCCCC----CCccCCCCceEEEecCCcceeecc
Q ss_pred ---EcCCCceEEEEeeCCCCCeEEeccCCC-----------eEEEeccCCCCCCCCCCeEEEeeeCCCceEEEEcC
Q 040662 254 ---VVDGSGYRVFTFNRSQMDWFEIESLDD-----------RVLFTGASCLWVPVEKGSAFANTVHWFGRYSYIRD 315 (365)
Q Consensus 254 ---~~~~~~~~V~~ld~~~~~W~~v~~lg~-----------~~lfvg~~~~~~~~~~n~IYf~~~~~~~~~vy~l~ 315 (365)
........||.+|..+++..++..-.. ...-+. +.-.|+.|+|.........+|.++
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 311 ADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPS-----FTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp ----CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCE-----ECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCce-----EccCCCeEEEEecCCCCceEEEEE
No 61
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.88 E-value=2.5e+02 Score=25.23 Aligned_cols=198 Identities=11% Similarity=0.020 Sum_probs=94.7
Q ss_pred cCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCC
Q 040662 101 KHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGD 180 (365)
Q Consensus 101 ~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~ 180 (365)
.+|-|++++.. ...+.++|+-+++...+....... . +. .+|. ++.+++....+ ...+..++...
T Consensus 140 ~~g~lyv~d~~--------~~~I~~id~~~g~~~~~~~~~~~~-~-ia--~~~~-g~~l~~~d~~~---~~~I~~~d~~~ 203 (409)
T 3hrp_A 140 GNNTVLAYQRD--------DPRVRLISVDDNKVTTVHPGFKGG-K-PA--VTKD-KQRVYSIGWEG---THTVYVYMKAS 203 (409)
T ss_dssp STTEEEEEETT--------TTEEEEEETTTTEEEEEEETCCBC-B-CE--ECTT-SSEEEEEBSST---TCEEEEEEGGG
T ss_pred CCCCEEEEecC--------CCcEEEEECCCCEEEEeeccCCCC-c-ee--EecC-CCcEEEEecCC---CceEEEEEcCC
Confidence 46777777665 367889999888765543221111 1 22 3343 23333322211 12566666543
Q ss_pred C-ceEEeee-eC-CccceeeEEEE--CCEEEEEecCCCcEEE-EEecCCceeeeecC---CCceecee-EEEEe--CCcE
Q 040662 181 T-TWTELRF-QD-NYRYVKNLVCA--DGFLYCSFFSLEAIVA-YNVASQNLEILPYP---PSILFMYK-YLTEY--DGSL 248 (365)
Q Consensus 181 ~-~W~~~~~-~~-~~~~~~~~v~~--~G~lY~~~l~~~g~i~-~d~~~~~~~~i~~p---~~~~~~~~-~Lve~--~G~L 248 (365)
+ ..+.+.. .. .......+++. +|.+|+ .+..+.|. +|++......+... ........ .+.-. +|.|
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv--~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYF--VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEE--ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEE--EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 2 2233311 11 12234455555 689999 77778888 99987654444211 11111201 45443 4677
Q ss_pred EEEEEEcCCCceEEEEeeCCCCCeEEeccCCCeEEE---eccCC-CCC--C--C-CCCeEEEeee-CCCceEEEEcCcee
Q 040662 249 LIFGKVVDGSGYRVFTFNRSQMDWFEIESLDDRVLF---TGASC-LWV--P--V-EKGSAFANTV-HWFGRYSYIRDVCR 318 (365)
Q Consensus 249 ~lV~~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lf---vg~~~-~~~--~--~-~~n~IYf~~~-~~~~~~vy~l~~~~ 318 (365)
++... ..-.|++++.+.. ...+..-+...=+ .+... -.. + + ..+.||+.+. .....+.+++.+++
T Consensus 282 yv~d~----~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 282 YMSDQ----NLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEEET----TTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEEeC----CCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 66432 2236777775543 1111100000000 00000 001 1 2 2334999985 44445788877776
Q ss_pred eee
Q 040662 319 EFI 321 (365)
Q Consensus 319 ~~~ 321 (365)
...
T Consensus 357 v~~ 359 (409)
T 3hrp_A 357 VST 359 (409)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 62
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=34.41 E-value=3.3e+02 Score=26.34 Aligned_cols=184 Identities=12% Similarity=0.052 Sum_probs=82.7
Q ss_pred CCCceEEEeeCCceEEEcCCCCc-eEEEecCCCCCCCCCCCeE--EEccCCeEEEeccccccCCCCccccEEEEcCCCCC
Q 040662 56 DKFPWLMGYNSHSCYLYDPCHKQ-KYTVFNSDKNRTTLLGARP--LDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQ 132 (365)
Q Consensus 56 ~~~P~ll~~~~~~~~~~~~~~~~-~~~~~l~~~~~P~~~~~~~--~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~ 132 (365)
++.|+|+..........+..... .+.+.. +.+....- +...+|.|+.++.. ...+..+++-...
T Consensus 7 ~~~~~~~~~~~~~I~~i~~~~~~~~~~~~~-----~~~~~~~~ld~~~~~~~ly~sD~~--------~~~I~r~~~~g~~ 73 (619)
T 3s94_A 7 HHAPLLLYANRRDLRLVDATNGKENATIVV-----GGLEDAAAVDFVFSHGLIYWSDVS--------EEAIKRTEFNKTE 73 (619)
T ss_dssp ---CCEEEECSSBEEEECCC---------C-----BCCSCEEEEEEETTTTEEEEEETT--------TTEEEEEEC----
T ss_pred ccCceEEEeccccEEEEeCCCCcceEEEEE-----cCCCceEEEEEEeCCCEEEEEECC--------CCeEEEEEccCCC
Confidence 45687777665555666665432 233322 33322221 34558899988876 3678888876653
Q ss_pred e--eeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEEE--CCEEEEE
Q 040662 133 I--INLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVCA--DGFLYCS 208 (365)
Q Consensus 133 ~--~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~--~G~lY~~ 208 (365)
. ..+.. .+ ..--.++.|+..+..+ ++.. ....+.+++.....=+.+.. .......++++. +|.+||
T Consensus 74 ~~~~v~~~--~~-~~P~GlAvD~~~~~ly--~~d~---~~~~I~v~~~dG~~~~~l~~-~~l~~P~~Iavdp~~g~ly~- 143 (619)
T 3s94_A 74 SVQNVVVS--GL-LSPDGLACDWLGEKLY--WTDS---ETNRIEVSNLDGSLRKVLFW-QELDQPRAIALDPSSGFMYW- 143 (619)
T ss_dssp -CEEEECS--SC-SCEEEEEEETTTTEEE--EEET---TTTEEEEEETTSCSCEEEEC-SSCSCCCCEEEETTTTEEEE-
T ss_pred ceEEEEeC--CC-CCcCeEEEEecCCEEE--EEeC---CCCEEEEEECCCCCEEEEEe-CCCCCCceEEEecCCCeEEE-
Confidence 1 11221 11 0112334444322222 2222 22356666654322122221 123345677774 799999
Q ss_pred ecCC--CcEEE-EEecCCceeeeecCCCceeceeEEEEe--CCcEEEEEEEcCCCceEEEEeeCCC
Q 040662 209 FFSL--EAIVA-YNVASQNLEILPYPPSILFMYKYLTEY--DGSLLIFGKVVDGSGYRVFTFNRSQ 269 (365)
Q Consensus 209 ~l~~--~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~--~G~L~lV~~~~~~~~~~V~~ld~~~ 269 (365)
-+. .+.|. ++++...-..+-.... ....-|.-. +|+|+.+... .-.|+++|.++
T Consensus 144 -tD~g~~~~I~r~~~dG~~~~~l~~~~~--~~P~Glald~~~~~LY~aD~~----~~~I~~~~~dG 202 (619)
T 3s94_A 144 -TDWGEVPKIERAGMDGSSRFIIINSEI--YWPNGLTLDYEEQKLYWADAK----LNFIHKSNLDG 202 (619)
T ss_dssp -EECSSSCEEEEEETTSCSCEEEECSSC--SSEEEEEEETTTTEEEEEETT----TCCEEEESSSC
T ss_pred -eccCCCCEEEEEECCCCceEEEEeCCC--CCCcEEEEEccCCEEEEEeCC----CCeEEEecCCC
Confidence 764 36788 8887654333321111 111223322 4677766422 23567776644
No 63
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=34.13 E-value=1.6e+02 Score=28.88 Aligned_cols=30 Identities=17% Similarity=0.224 Sum_probs=23.1
Q ss_pred eeEEEECCEEEEEecCCCcEEE-EEecCC--ceee
Q 040662 196 KNLVCADGFLYCSFFSLEAIVA-YNVASQ--NLEI 227 (365)
Q Consensus 196 ~~~v~~~G~lY~~~l~~~g~i~-~d~~~~--~~~~ 227 (365)
...++.+|++|+ .+..+.|. +|..+. .|+.
T Consensus 71 ~~P~v~~g~vyv--~~~~~~v~AlD~~tG~~~W~~ 103 (677)
T 1kb0_A 71 ATPVVVDGIMYV--SASWSVVHAIDTRTGNRIWTY 103 (677)
T ss_dssp CCCEEETTEEEE--ECGGGCEEEEETTTTEEEEEE
T ss_pred eCCEEECCEEEE--ECCCCeEEEEECCCCcEEEEE
Confidence 345678999999 88888888 998765 4764
No 64
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=33.17 E-value=1.9e+02 Score=23.38 Aligned_cols=183 Identities=9% Similarity=-0.105 Sum_probs=86.2
Q ss_pred ccEEEEcCCC-CCeeeCCCCcc-cceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeE
Q 040662 121 SPLFFYSPFA-DQIINLPAWRE-FSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNL 198 (365)
Q Consensus 121 ~~~~l~NP~T-~~~~~LP~~~~-~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~ 198 (365)
..++++|..+ ++...+..... .....+.+ .|. +.++++.....+ ....+..++..++.-+.+.... ....+
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--spd-g~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~---~~~~~ 134 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGFATICNNDHGI--SPD-GALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNL---PSYWH 134 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTTCCCBCSCCEE--CTT-SSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSS---SEEEE
T ss_pred CeEEEEeCCCCCCceEeccccccccccceEE--CCC-CCEEEEEEeCCC-CcceEEEEECCCCceEEeecCC---Cccce
Confidence 5799999999 87766654311 11222333 332 345554442211 2356666766555544433211 13333
Q ss_pred EEE-CCE-EEEEecCCCcE--EE-EEecCCceeeeecCCCceeceeEEEEe-CCcEEEEEEEcCCCceEEEEeeCCCCCe
Q 040662 199 VCA-DGF-LYCSFFSLEAI--VA-YNVASQNLEILPYPPSILFMYKYLTEY-DGSLLIFGKVVDGSGYRVFTFNRSQMDW 272 (365)
Q Consensus 199 v~~-~G~-lY~~~l~~~g~--i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~-~G~L~lV~~~~~~~~~~V~~ld~~~~~W 272 (365)
.+. +|+ +++ -....+. |. +|+.+.....+..... ....+.-+ +|+.+++.... ....+||.++......
T Consensus 135 ~~spdg~~l~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~-~~~~~i~~~~~~~~~~ 209 (297)
T 2ojh_A 135 GWSPDGKSFTY-CGIRDQVFDIYSMDIDSGVETRLTHGEG---RNDGPDYSPDGRWIYFNSSR-TGQMQIWRVRVDGSSV 209 (297)
T ss_dssp EECTTSSEEEE-EEEETTEEEEEEEETTTCCEEECCCSSS---CEEEEEECTTSSEEEEEECT-TSSCEEEEEETTSSCE
T ss_pred EECCCCCEEEE-EECCCCceEEEEEECCCCcceEcccCCC---ccccceECCCCCEEEEEecC-CCCccEEEECCCCCCc
Confidence 444 554 332 0223453 33 4554443332221111 11122222 67766655432 3578999998766665
Q ss_pred EEeccCCCeEEEeccCCCCCCCCCCeEEEeeeCC----------CceEEEEcCceeee
Q 040662 273 FEIESLDDRVLFTGASCLWVPVEKGSAFANTVHW----------FGRYSYIRDVCREF 320 (365)
Q Consensus 273 ~~v~~lg~~~lfvg~~~~~~~~~~n~IYf~~~~~----------~~~~vy~l~~~~~~ 320 (365)
..+..-+.....+. +.-.++.|++..... ....++++++++..
T Consensus 210 ~~~~~~~~~~~~~~-----~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 210 ERITDSAYGDWFPH-----PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp EECCCCSEEEEEEE-----ECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred EEEecCCcccCCeE-----ECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 55543322211111 112466676665321 11357777776543
No 65
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=32.97 E-value=2.4e+02 Score=24.41 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=66.8
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCCCCCee-eCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEec
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII-NLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRP 178 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~ 178 (365)
..+|.|+.++.. ...++.+++-++... .+... .+. .-..++.++..+ .+.+ ... ....+.+++.
T Consensus 44 ~~~~~lyw~D~~--------~~~I~r~~~~g~~~~~~~~~~-~l~-~p~glavd~~~g-~ly~-~d~---~~~~I~~~~~ 108 (318)
T 3sov_A 44 FSHGLIYWSDVS--------EEAIKRTEFNKTESVQNVVVS-GLL-SPDGLACDWLGE-KLYW-TDS---ETNRIEVSNL 108 (318)
T ss_dssp GGGTEEEEEETT--------TTEEEEEETTSSSCCCEEEEE-CCS-CCCEEEEETTTT-EEEE-EET---TTTEEEEEET
T ss_pred eCCCEEEEEECC--------CCcEEEEEccCCCceEEEEcC-CCC-CccEEEEEcCCC-eEEE-EEC---CCCEEEEEEC
Confidence 346788888765 367788887766321 00000 000 001122333222 2222 221 1235566665
Q ss_pred CCCceEEeeeeCCccceeeEEEE--CCEEEEEecCC--CcEEE-EEecCCceeeeecCCCceeceeEEEEe--CCcEEEE
Q 040662 179 GDTTWTELRFQDNYRYVKNLVCA--DGFLYCSFFSL--EAIVA-YNVASQNLEILPYPPSILFMYKYLTEY--DGSLLIF 251 (365)
Q Consensus 179 g~~~W~~~~~~~~~~~~~~~v~~--~G~lY~~~l~~--~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~--~G~L~lV 251 (365)
....=+.+.. ........+++. +|.+|| .+. .+.|. ++++...-+.+-.... ....-|.-. +|+|+.+
T Consensus 109 dG~~~~~l~~-~~~~~P~giavdp~~g~ly~--td~~~~~~I~r~~~dG~~~~~~~~~~l--~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 109 DGSLRKVLFW-QELDQPRAIALDPSSGFMYW--TDWGEVPKIERAGMDGSSRFIIINSEI--YWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp TSCSCEEEEC-SSCSSEEEEEEEGGGTEEEE--EECSSSCEEEEEETTSCSCEEEECSSC--SCEEEEEEETTTTEEEEE
T ss_pred CCCcEEEEEe-CCCCCccEEEEeCCCCEEEE--EecCCCCEEEEEEcCCCCeEEEEECCC--CCccEEEEeccCCEEEEE
Confidence 4322222221 122345566664 699999 774 46788 9987543322221110 111223332 4666665
Q ss_pred EEEcCCCceEEEEeeCCC
Q 040662 252 GKVVDGSGYRVFTFNRSQ 269 (365)
Q Consensus 252 ~~~~~~~~~~V~~ld~~~ 269 (365)
.. ..-.|+++|.++
T Consensus 184 D~----~~~~I~~~d~dG 197 (318)
T 3sov_A 184 DA----KLNFIHKSNLDG 197 (318)
T ss_dssp ET----TTTEEEEEETTS
T ss_pred EC----CCCEEEEEcCCC
Confidence 42 223566666544
No 66
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=32.51 E-value=86 Score=30.82 Aligned_cols=56 Identities=14% Similarity=0.127 Sum_probs=39.6
Q ss_pred cCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCCCceEEEEeeCCCCCeEEecc
Q 040662 221 ASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDGSGYRVFTFNRSQMDWFEIES 277 (365)
Q Consensus 221 ~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~~ 277 (365)
...+|+.-...++.+.....+||.+|+|+|..+... ....|++-...+..|.+...
T Consensus 227 ~G~TW~ls~~~~~~gc~EpsVvEwdG~Lmm~~R~~~-g~R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 227 EGKTWKFGKGRSAFGCSEPVALEWEGKLIINTRVDY-RRRLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp TTSSCEECSCCCCTTEEEEEEEEETTEEEEEEEETT-SCCCEEEESSTTSSCEECTT
T ss_pred CCCCEEECCCCCCCCccceEEEEECCEEEEEEEccC-CcEEEEEecCCCcccccccc
Confidence 345798654434445677889999999998888753 34568877666788998653
No 67
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=31.87 E-value=3.7e+02 Score=26.20 Aligned_cols=194 Identities=11% Similarity=0.045 Sum_probs=0.0
Q ss_pred EEccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEe
Q 040662 98 LDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICR 177 (365)
Q Consensus 98 ~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~ 177 (365)
+...+.+|+..... +.+.++|.-|++.+.--....-....+.++.+ +.+++.....+ .+.+|+
T Consensus 21 ~sp~~~~la~~~~~---------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg-----~i~vw~ 83 (814)
T 3mkq_A 21 FHPTEPWVLTTLYS---------GRVEIWNYETQVEVRSIQVTETPVRAGKFIAR---KNWIIVGSDDF-----RIRVFN 83 (814)
T ss_dssp ECSSSSEEEEEETT---------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGG---GTEEEEEETTS-----EEEEEE
T ss_pred ECCCCCEEEEEeCC---------CEEEEEECCCCceEEEEecCCCcEEEEEEeCC---CCEEEEEeCCC-----eEEEEE
Q ss_pred cCCCceEEeeeeCCccceeeEEEE--CCEEEEEecCCCcEEE-EEecCC-ceeeeecCCCceeceeEEEEeCCcEEEEEE
Q 040662 178 PGDTTWTELRFQDNYRYVKNLVCA--DGFLYCSFFSLEAIVA-YNVASQ-NLEILPYPPSILFMYKYLTEYDGSLLIFGK 253 (365)
Q Consensus 178 ~g~~~W~~~~~~~~~~~~~~~v~~--~G~lY~~~l~~~g~i~-~d~~~~-~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~ 253 (365)
..++.....-..+ ......+.+. +..+.. .+.+|.|. +|+.+. .....-............-..+|.++++..
T Consensus 84 ~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~--~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 84 YNTGEKVVDFEAH-PDYIRSIAVHPTKPYVLS--GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp TTTCCEEEEEECC-SSCEEEEEECSSSSEEEE--EETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred CCCCcEEEEEecC-CCCEEEEEEeCCCCEEEE--EcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Q ss_pred EcCCCceEEEEeeCCCCCeEEeccCCCeEEEeccCCCCC-CCCCCeEEEeeeCCCceEEEEcCcee
Q 040662 254 VVDGSGYRVFTFNRSQMDWFEIESLDDRVLFTGASCLWV-PVEKGSAFANTVHWFGRYSYIRDVCR 318 (365)
Q Consensus 254 ~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~-~~~~n~IYf~~~~~~~~~vy~l~~~~ 318 (365)
.. ..+.||.++...........-......+. + +...+..++....+....+|++++++
T Consensus 161 ~d--g~v~vwd~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 161 LD--RTVKVWSLGQSTPNFTLTTGQERGVNYVD-----YYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp TT--SEEEEEETTCSSCSEEEECCCTTCCCEEE-----ECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred CC--CeEEEEECCCCcceeEEecCCCCCEEEEE-----EEECCCCCEEEEEeCCCEEEEEECCCCc
No 68
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=30.67 E-value=2.1e+02 Score=25.51 Aligned_cols=35 Identities=20% Similarity=0.423 Sum_probs=22.5
Q ss_pred CCc--EEEEEEEcCCCceEEEEeeCCCCCeEEeccCC
Q 040662 245 DGS--LLIFGKVVDGSGYRVFTFNRSQMDWFEIESLD 279 (365)
Q Consensus 245 ~G~--L~lV~~~~~~~~~~V~~ld~~~~~W~~v~~lg 279 (365)
+|. |++|........++||++|..+...+.+.++.
T Consensus 124 dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 124 DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp TCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 454 55555443357899999998766666555543
No 69
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=30.62 E-value=2.5e+02 Score=23.77 Aligned_cols=101 Identities=12% Similarity=0.017 Sum_probs=55.1
Q ss_pred EEEEEEecCCCceEEeeeeCCccceeeEEEE-CCEEEEEecCCC-----cEEE-EEecCCcee-eeecCCCceeceeEEE
Q 040662 171 SCISICRPGDTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSLE-----AIVA-YNVASQNLE-ILPYPPSILFMYKYLT 242 (365)
Q Consensus 171 ~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~~-----g~i~-~d~~~~~~~-~i~~p~~~~~~~~~Lv 242 (365)
..+..++..++..+.+.... ......+++. +|.+|+ .+.. +.|. +|+++.... .+..... ......+.
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v--~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~i~ 141 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFV--CYLGDFKSTGGIFAATENGDNLQDIIEDLST-AYCIDDMV 141 (333)
T ss_dssp CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEE--EECTTSSSCCEEEEECTTSCSCEEEECSSSS-CCCEEEEE
T ss_pred CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEE--EeCCCCCCCceEEEEeCCCCEEEEEEccCcc-CCcccceE
Confidence 46778888777766554221 1124455554 788887 6543 3677 998776554 2321111 11122333
Q ss_pred E-eCCcEEEEEEEc--CCCceEEEEeeCCCCCeEEe
Q 040662 243 E-YDGSLLIFGKVV--DGSGYRVFTFNRSQMDWFEI 275 (365)
Q Consensus 243 e-~~G~L~lV~~~~--~~~~~~V~~ld~~~~~W~~v 275 (365)
. .+|++++..... ......||++|.++.+...+
T Consensus 142 ~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 142 FDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp ECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred ECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 3 368877654321 01246899998766555543
No 70
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=30.15 E-value=3.1e+02 Score=25.66 Aligned_cols=73 Identities=7% Similarity=-0.031 Sum_probs=43.3
Q ss_pred eeeEEEECCEEEEEecCCCcEEE-EEecC-CceeeeecC----CC-ceeceeEEEEe------CCcEEEEEEEcCC-Cce
Q 040662 195 VKNLVCADGFLYCSFFSLEAIVA-YNVAS-QNLEILPYP----PS-ILFMYKYLTEY------DGSLLIFGKVVDG-SGY 260 (365)
Q Consensus 195 ~~~~v~~~G~lY~~~l~~~g~i~-~d~~~-~~~~~i~~p----~~-~~~~~~~Lve~------~G~L~lV~~~~~~-~~~ 260 (365)
-.++++++|+||+ +...|... +|+.+ +|....... +. ........-.. .|+|+.+...... ..+
T Consensus 135 NT~v~~~~g~llA--l~E~~~p~~ldp~tLeT~G~~d~~g~l~~~~~~tAHPk~Dp~~~~~~gtgel~~fg~~~~~~~~~ 212 (490)
T 2biw_A 135 NTNITYWGDRLLA--LWEGGQPHRLEPSNLATIGLDDLGGILAEGQPLSAHPRIDPASTFDGGQPCYVTFSIKSSLSSTL 212 (490)
T ss_dssp CSEEEEETTEEEE--ECTTSCCEEECTTTCCEEEECCTTTTSCTTCCCCSCCEEESSCTTTTTCCEEEEEEEEESSEEEE
T ss_pred EEEEEEECCEEEE--EEcCCCCEecccccccEeeeeccCCcccCCcccccCceECccccccCCCCeEEEEEecCCCCcEE
Confidence 3578899999999 99888777 88854 443322211 11 11122232223 4688877765422 337
Q ss_pred EEEEeeCCC
Q 040662 261 RVFTFNRSQ 269 (365)
Q Consensus 261 ~V~~ld~~~ 269 (365)
.+++++.++
T Consensus 213 ~~~~~~~~G 221 (490)
T 2biw_A 213 TLLELDPQG 221 (490)
T ss_dssp EEEEECTTS
T ss_pred EEEEECCCC
Confidence 799998653
No 71
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=29.73 E-value=3e+02 Score=24.55 Aligned_cols=180 Identities=9% Similarity=-0.045 Sum_probs=90.3
Q ss_pred ccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEE
Q 040662 121 SPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVC 200 (365)
Q Consensus 121 ~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~ 200 (365)
..++++|..|++...+..... ....+.+ .|. +.++++..... ....+.+++..++..+.+... ......+.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-~~~~~~~--spd-g~~la~~~~~~--g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~ 274 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-HNGAPAF--SPD-GSKLAFALSKT--GSLNLYVMDLASGQIRQVTDG--RSNNTEPTW 274 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-CEEEEEE--CTT-SSEEEEEECTT--SSCEEEEEETTTCCEEECCCC--SSCEEEEEE
T ss_pred cEEEEEECCCCcEEEeecCCC-cccCEEE--cCC-CCEEEEEEecC--CCceEEEEECCCCCEEeCcCC--CCcccceEE
Confidence 478899999988776544311 2233334 443 34555443321 235678888877665544321 112344555
Q ss_pred E-CCE-EEEEecCC-Cc--EEE-EEecCCceeeeecCCCceeceeEEEEe-CCcEEEEEEEcCCCceEEEEeeCCCCCeE
Q 040662 201 A-DGF-LYCSFFSL-EA--IVA-YNVASQNLEILPYPPSILFMYKYLTEY-DGSLLIFGKVVDGSGYRVFTFNRSQMDWF 273 (365)
Q Consensus 201 ~-~G~-lY~~~l~~-~g--~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~-~G~L~lV~~~~~~~~~~V~~ld~~~~~W~ 273 (365)
. +|+ +++ .+. .| .|. +|+.+.....+..... ....+.-+ +|+.+++.... .....|+.+|..+.+..
T Consensus 275 spdg~~l~~--~s~~~g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdG~~l~~~~~~-~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 275 FPDSQNLAF--TSDQAGRPQVYKVNINGGAPQRITWEGS---QNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp CTTSSEEEE--EECTTSSCEEEEEETTSSCCEECCCSSS---EEEEEEECTTSSEEEEEEEC-SSCEEEEEEETTTCCEE
T ss_pred CCCCCEEEE--EECCCCCcEEEEEECCCCCEEEEecCCC---cccCeEECCCCCEEEEEECc-CCceEEEEEECCCCCEE
Confidence 4 665 443 433 33 666 8887654332221111 11112223 68766655443 23467777777766665
Q ss_pred EeccCCCeEEEeccCCCCCCCCCCeEEEeeeCCC--ceEEEEcCceeee
Q 040662 274 EIESLDDRVLFTGASCLWVPVEKGSAFANTVHWF--GRYSYIRDVCREF 320 (365)
Q Consensus 274 ~v~~lg~~~lfvg~~~~~~~~~~n~IYf~~~~~~--~~~vy~l~~~~~~ 320 (365)
.+..-. ...-+. +.-.|+.|+|...... ...+++++.+...
T Consensus 349 ~l~~~~-~~~~~~-----~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~ 391 (415)
T 2hqs_A 349 VLSSTF-LDETPS-----LAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA 391 (415)
T ss_dssp ECCCSS-SCEEEE-----ECTTSSEEEEEEEETTEEEEEEEETTSCCEE
T ss_pred EecCCC-CcCCeE-----EcCCCCEEEEEEcCCCccEEEEEECCCCcEE
Confidence 544322 111111 1125677777764221 2357777665444
No 72
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=29.16 E-value=2.8e+02 Score=24.03 Aligned_cols=97 Identities=16% Similarity=0.110 Sum_probs=54.5
Q ss_pred CCeEEEeccccccCCCCccccEEEEcCCCCCee-eCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCC
Q 040662 102 HGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII-NLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGD 180 (365)
Q Consensus 102 ~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~ 180 (365)
+|.+++.... +.++.+|+.|++.+ +.+.. . ...... .++.+++.... ..+..++..+
T Consensus 239 ~~~v~~~~~~---------g~l~~~d~~tG~~~w~~~~~-~--~~~~~~-----~~~~l~~~~~~-----g~l~~~d~~t 296 (376)
T 3q7m_A 239 NGVVFALAYN---------GNLTALDLRSGQIMWKRELG-S--VNDFIV-----DGNRIYLVDQN-----DRVMALTIDG 296 (376)
T ss_dssp TTEEEEECTT---------SCEEEEETTTCCEEEEECCC-C--EEEEEE-----ETTEEEEEETT-----CCEEEEETTT
T ss_pred CCEEEEEecC---------cEEEEEECCCCcEEeeccCC-C--CCCceE-----ECCEEEEEcCC-----CeEEEEECCC
Confidence 5666666543 57899999999753 22211 1 111111 12333332221 2455666544
Q ss_pred --CceEEeeeeCCccceeeEEEECCEEEEEecCCCcEEE-EEecCCc
Q 040662 181 --TTWTELRFQDNYRYVKNLVCADGFLYCSFFSLEAIVA-YNVASQN 224 (365)
Q Consensus 181 --~~W~~~~~~~~~~~~~~~v~~~G~lY~~~l~~~g~i~-~d~~~~~ 224 (365)
..|+.-... .......+..+|.+|+ .+..|.+. +|+.+.+
T Consensus 297 G~~~w~~~~~~--~~~~~~~~~~~~~l~v--~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 297 GVTLWTQSDLL--HRLLTSPVLYNGNLVV--GDSEGYLHWINVEDGR 339 (376)
T ss_dssp CCEEEEECTTT--TSCCCCCEEETTEEEE--ECTTSEEEEEETTTCC
T ss_pred CcEEEeecccC--CCcccCCEEECCEEEE--EeCCCeEEEEECCCCc
Confidence 457653211 1224455678999999 88888888 9987764
No 73
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=28.69 E-value=3.2e+02 Score=24.43 Aligned_cols=149 Identities=12% Similarity=0.112 Sum_probs=78.1
Q ss_pred ccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeCCccceeeEEE
Q 040662 121 SPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQDNYRYVKNLVC 200 (365)
Q Consensus 121 ~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~ 200 (365)
..++++|..|++...+..- .-....+.+ .|. +.++++..... ....+..++..++.-+.+... ......+++
T Consensus 247 ~~i~~~d~~~~~~~~l~~~-~~~~~~~~~--spd-g~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~ 318 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDG-RSNNTEPTW--FPD-SQNLAFTSDQA--GRPQVYKVNINGGAPQRITWE--GSQNQDADV 318 (415)
T ss_dssp CEEEEEETTTCCEEECCCC-SSCEEEEEE--CTT-SSEEEEEECTT--SSCEEEEEETTSSCCEECCCS--SSEEEEEEE
T ss_pred ceEEEEECCCCCEEeCcCC-CCcccceEE--CCC-CCEEEEEECCC--CCcEEEEEECCCCCEEEEecC--CCcccCeEE
Confidence 4699999999988777554 212233333 443 34555544321 234677778766554433221 112334444
Q ss_pred E-CCEEEEEecCC---CcEEE-EEecCCceeeeecCCCceeceeEEEEe-CCcEEEEEEEcCCCceEEEEeeCCCCCeEE
Q 040662 201 A-DGFLYCSFFSL---EAIVA-YNVASQNLEILPYPPSILFMYKYLTEY-DGSLLIFGKVVDGSGYRVFTFNRSQMDWFE 274 (365)
Q Consensus 201 ~-~G~lY~~~l~~---~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~-~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~ 274 (365)
. +|+..+ +... ...|. +|+.+.....+.... ....+.-+ +|+.++..... .....||.+|.++....+
T Consensus 319 spdG~~l~-~~~~~~g~~~i~~~d~~~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~-~~~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 319 SSDGKFMV-MVSSNGGQQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQ-GMGSVLNLVSTDGRFKAR 392 (415)
T ss_dssp CTTSSEEE-EEEECSSCEEEEEEETTTCCEEECCCSS----SCEEEEECTTSSEEEEEEEE-TTEEEEEEEETTSCCEEE
T ss_pred CCCCCEEE-EEECcCCceEEEEEECCCCCEEEecCCC----CcCCeEEcCCCCEEEEEEcC-CCccEEEEEECCCCcEEE
Confidence 3 665322 0332 24677 898876554333211 11112222 68866655443 345578888877766666
Q ss_pred eccCCCeEE
Q 040662 275 IESLDDRVL 283 (365)
Q Consensus 275 v~~lg~~~l 283 (365)
+..-.+.+.
T Consensus 393 l~~~~~~v~ 401 (415)
T 2hqs_A 393 LPATDGQVK 401 (415)
T ss_dssp CCCSSSEEE
T ss_pred eeCCCCCCc
Confidence 665544443
No 74
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=28.07 E-value=3.1e+02 Score=24.20 Aligned_cols=99 Identities=12% Similarity=0.024 Sum_probs=56.0
Q ss_pred EEEEEecCC--CceEEeeeeCCccceeeEEEE---CCEEEEEecCCCc----EEE-EEecCCceeeeecCC--Cc--e--
Q 040662 172 CISICRPGD--TTWTELRFQDNYRYVKNLVCA---DGFLYCSFFSLEA----IVA-YNVASQNLEILPYPP--SI--L-- 235 (365)
Q Consensus 172 ~~~~~~~g~--~~W~~~~~~~~~~~~~~~v~~---~G~lY~~~l~~~g----~i~-~d~~~~~~~~i~~p~--~~--~-- 235 (365)
.+.+++..+ ..|+.+...........+++. ++.+|+ .+..| .|. .+-...+|+.+..+. +. .
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~--g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~ 109 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLM--AARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGE 109 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEE--EEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC---
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEE--EecCCCCCccEEEeCCCCCCceECCccccCCCccccc
Confidence 355666654 689987421111234555554 588998 77655 555 444456898765432 11 0
Q ss_pred ----ecee-EEEEe----CCcEEEEEEEcCCCceEEEEeeCCCCCeEEecc
Q 040662 236 ----FMYK-YLTEY----DGSLLIFGKVVDGSGYRVFTFNRSQMDWFEIES 277 (365)
Q Consensus 236 ----~~~~-~Lve~----~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~~ 277 (365)
.... .|... .+.|++.... -.||+.+.....|.++..
T Consensus 110 ~~~~~~~i~~l~~~~~~~~~~l~~g~~~-----ggl~~S~DgG~tW~~~~~ 155 (394)
T 3b7f_A 110 TGRVVDHVFWLTPGHASEPGTWYAGTSP-----QGLFRSTDHGASWEPVAG 155 (394)
T ss_dssp -CCCCCEEEEEEECCTTSTTCEEEEEET-----TEEEEESSTTSBCEECHH
T ss_pred ccccccceeEEEeCCCCCCCEEEEEecC-----CcEEEEcCCCCCeEECcC
Confidence 0111 23333 4677665432 268998877888998754
No 75
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=28.03 E-value=2.9e+02 Score=26.36 Aligned_cols=30 Identities=10% Similarity=0.070 Sum_probs=22.8
Q ss_pred eeEEEECCEEEEEecCC-CcEEE-EEe-cCC--ceee
Q 040662 196 KNLVCADGFLYCSFFSL-EAIVA-YNV-ASQ--NLEI 227 (365)
Q Consensus 196 ~~~v~~~G~lY~~~l~~-~g~i~-~d~-~~~--~~~~ 227 (365)
...++.+|++|+ .+. .+.+. +|. .+. .|+.
T Consensus 56 ~~P~v~~g~vyv--~~~~~~~v~AlD~~~tG~~~W~~ 90 (571)
T 2ad6_A 56 GAPLVIGDMMYV--HSAFPNNTYALNLNDPGKIVWQH 90 (571)
T ss_dssp SCCEEETTEEEE--ECSTTTCEEEEETTCTTSEEEEE
T ss_pred cccEEECCEEEE--EeCCCCEEEEEeCCCCccEEEEE
Confidence 345678999999 887 78888 998 654 4764
No 76
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=27.52 E-value=62 Score=29.42 Aligned_cols=60 Identities=15% Similarity=0.110 Sum_probs=40.1
Q ss_pred EEecCCceeeeecCCCceeceeEEEEeCCcEEEEEEEcCCCceEEEEeeCCCCCeEEeccCC
Q 040662 218 YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIFGKVVDGSGYRVFTFNRSQMDWFEIESLD 279 (365)
Q Consensus 218 ~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV~~~~~~~~~~V~~ld~~~~~W~~v~~lg 279 (365)
|--+..+|+.-...++.......+||.+|+|+|..+. .....|++-...+..|.+...+.
T Consensus 208 yS~DG~tW~~~~~~~~~~~~ep~vvE~dG~L~m~~R~--~g~r~v~~S~D~G~tWt~~~~~~ 267 (379)
T 3sil_A 208 YSTDGITWSLPSGYCEGFGSENNIIEFNASLVNNIRN--SGLRRSFETKDFGKTWTEFPPMD 267 (379)
T ss_dssp EESSSSSEECCSCCEECTTCCEEEEEETTEEEEEECC--SSBCBCEEESSSSSCCEECTTTT
T ss_pred EcCCCCCeEECCCCCCccCCCCEEEEECCEEEEEEEe--CCCEEEEEEcCCCccCCCCcccc
Confidence 4333568975433222345678899999999998887 23445777766778999975443
No 77
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=27.48 E-value=2.9e+02 Score=23.50 Aligned_cols=130 Identities=8% Similarity=-0.124 Sum_probs=71.2
Q ss_pred eEEEcCCCCceE-EEecCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCee-eCCCCcccceeE
Q 040662 69 CYLYDPCHKQKY-TVFNSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII-NLPAWREFSIAK 146 (365)
Q Consensus 69 ~~~~~~~~~~~~-~~~l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~ 146 (365)
...+|+.+++.. .+++ +......=+.-.++.|+..... .+.++++|+.|++.+ ++|.-.. ..
T Consensus 46 v~~iD~~tg~v~~~i~l-----~~~~fgeGi~~~g~~lyv~t~~--------~~~v~viD~~t~~v~~~i~~g~~---~g 109 (266)
T 2iwa_A 46 VRQVALQTGKVENIHKM-----DDSYFGEGLTLLNEKLYQVVWL--------KNIGFIYDRRTLSNIKNFTHQMK---DG 109 (266)
T ss_dssp EEEEETTTCCEEEEEEC-----CTTCCEEEEEEETTEEEEEETT--------CSEEEEEETTTTEEEEEEECCSS---SC
T ss_pred EEEEECCCCCEEEEEec-----CCCcceEEEEEeCCEEEEEEec--------CCEEEEEECCCCcEEEEEECCCC---Ce
Confidence 466788777644 3444 3211111122236677777765 478999999998754 2332101 11
Q ss_pred EEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCc-eEEeeeeC---CccceeeEEEECCEEEEEecCC-CcEEE-EEe
Q 040662 147 ATFSATPISPDCVVFVTWVGIMEISCISICRPGDTT-WTELRFQD---NYRYVKNLVCADGFLYCSFFSL-EAIVA-YNV 220 (365)
Q Consensus 147 ~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~-W~~~~~~~---~~~~~~~~v~~~G~lY~~~l~~-~g~i~-~d~ 220 (365)
.+++.+ ++..+ ++.. ...+.+.++.+.+ =+.+.... .......+.+.+|.+|+ -.. .+.|. +|+
T Consensus 110 ~glt~D---g~~l~-vs~g----s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyv--n~~~~~~V~vID~ 179 (266)
T 2iwa_A 110 WGLATD---GKILY-GSDG----TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWA--NIWQTDCIARISA 179 (266)
T ss_dssp CEEEEC---SSSEE-EECS----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE--EETTSSEEEEEET
T ss_pred EEEEEC---CCEEE-EECC----CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEE--ecCCCCeEEEEEC
Confidence 234443 23333 3332 2478888887643 23333211 11224456677999998 543 46788 999
Q ss_pred cCCc
Q 040662 221 ASQN 224 (365)
Q Consensus 221 ~~~~ 224 (365)
.+.+
T Consensus 180 ~tg~ 183 (266)
T 2iwa_A 180 KDGT 183 (266)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8764
No 78
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=27.42 E-value=1.7e+02 Score=28.56 Aligned_cols=29 Identities=21% Similarity=0.133 Sum_probs=22.7
Q ss_pred eEEEECCEEEEEecCCCcEEE-EEecCC--ceee
Q 040662 197 NLVCADGFLYCSFFSLEAIVA-YNVASQ--NLEI 227 (365)
Q Consensus 197 ~~v~~~G~lY~~~l~~~g~i~-~d~~~~--~~~~ 227 (365)
..++.+|++|+ .+..+.+. +|..+. .|+.
T Consensus 61 ~P~v~~g~vyv--~~~~~~v~AlD~~tG~~~W~~ 92 (668)
T 1kv9_A 61 TPLFHDGVIYT--SMSWSRVIAVDAASGKELWRY 92 (668)
T ss_dssp CCEEETTEEEE--EEGGGEEEEEETTTCCEEEEE
T ss_pred CCEEECCEEEE--ECCCCeEEEEECCCChhceEE
Confidence 45678999999 88888888 998764 4764
No 79
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=27.24 E-value=2.6e+02 Score=23.05 Aligned_cols=65 Identities=8% Similarity=0.102 Sum_probs=35.2
Q ss_pred ccCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcc--cceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEe
Q 040662 100 SKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWRE--FSIAKATFSATPISPDCVVFVTWVGIMEISCISICR 177 (365)
Q Consensus 100 s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~--~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~ 177 (365)
|++|+|..... +.+.|+|..|++.+++-.... ..+..+.+ .|. +.+++. ... ...+.+|+
T Consensus 34 S~~~~lAvg~D----------~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~--~~~-~~~l~s-gs~----Dg~v~iw~ 95 (318)
T 4ggc_A 34 SSGNVLAVALD----------NSVYLWSASSGDILQLLQMEQPGEYISSVAW--IKE-GNYLAV-GTS----SAEVQLWD 95 (318)
T ss_dssp CTTSEEEEEET----------TEEEEEETTTCCEEEEEECCSTTCCEEEEEE--CTT-SSEEEE-EET----TSEEEEEE
T ss_pred CCCCEEEEEeC----------CEEEEEECCCCCEEEEEEecCCCCeEEEEEE--CCC-CCEEEE-EEC----CCcEEEee
Confidence 45676655432 579999999998765322211 11233334 442 344443 221 24677787
Q ss_pred cCCCc
Q 040662 178 PGDTT 182 (365)
Q Consensus 178 ~g~~~ 182 (365)
..+++
T Consensus 96 ~~~~~ 100 (318)
T 4ggc_A 96 VQQQK 100 (318)
T ss_dssp TTTTE
T ss_pred cCCce
Confidence 76654
No 80
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=26.69 E-value=2.8e+02 Score=23.20 Aligned_cols=92 Identities=7% Similarity=-0.075 Sum_probs=50.3
Q ss_pred EEEEEEecCCCceEEeeeeCCccceeeEEEE-CCEEEEEecCCCcEEE-EEecCCceeeeecCCCc--eeceeEEEE-eC
Q 040662 171 SCISICRPGDTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSLEAIVA-YNVASQNLEILPYPPSI--LFMYKYLTE-YD 245 (365)
Q Consensus 171 ~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~~g~i~-~d~~~~~~~~i~~p~~~--~~~~~~Lve-~~ 245 (365)
..+..|++.++.-+....+. ....+++. +|.+|+ -. ...|. +|+++.+++.+...... ......+.. .+
T Consensus 35 ~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~dG~l~v--~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d 108 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMDA---PVSSVALRQSGGYVA--TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA 108 (297)
T ss_dssp TEEEEEETTTCCEEEEECSS---CEEEEEEBTTSSEEE--EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT
T ss_pred CEEEEEECCCCcEEEEeCCC---ceEEEEECCCCCEEE--EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC
Confidence 36677777665544443221 23344444 688766 44 44566 99988777655432211 111223333 37
Q ss_pred CcEEEEEEEcC-------CCceEEEEeeCC
Q 040662 246 GSLLIFGKVVD-------GSGYRVFTFNRS 268 (365)
Q Consensus 246 G~L~lV~~~~~-------~~~~~V~~ld~~ 268 (365)
|++++...... ...-.||+++..
T Consensus 109 G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~ 138 (297)
T 3g4e_A 109 GRYFAGTMAEETAPAVLERHQGALYSLFPD 138 (297)
T ss_dssp SCEEEEEEECCSBTTBCCTTCEEEEEECTT
T ss_pred CCEEEecCCcccccccccCCCcEEEEEECC
Confidence 99777554421 134689999864
No 81
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=25.31 E-value=3.2e+02 Score=23.31 Aligned_cols=155 Identities=8% Similarity=0.105 Sum_probs=0.0
Q ss_pred CCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCC
Q 040662 102 HGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDT 181 (365)
Q Consensus 102 ~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~ 181 (365)
+.+++..... +.+.++|..+++...+-.. ........+...| ..-.++... ....+.+|+..+.
T Consensus 139 ~~~l~s~s~d---------g~i~~wd~~~~~~~~~~~~-~~~~~i~~~~~~p--dg~~lasg~----~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 139 TEYFIWADNR---------GTIGFQSYEDDSQYIVHSA-KSDVEYSSGVLHK--DSLLLALYS----PDGILDVYNLSSP 202 (343)
T ss_dssp CCEEEEEETT---------CCEEEEESSSSCEEEEECC-CSSCCCCEEEECT--TSCEEEEEC----TTSCEEEEESSCT
T ss_pred CCEEEEEeCC---------CcEEEEECCCCcEEEEEec-CCCCceEEEEECC--CCCEEEEEc----CCCEEEEEECCCC
Q ss_pred ceEEeeeeC-CccceeeEEEE-CCEEEEEecCCCcEEE-EEecCCceeeeecCCCceeceeE---EEEeCCcEEEEEEEc
Q 040662 182 TWTELRFQD-NYRYVKNLVCA-DGFLYCSFFSLEAIVA-YNVASQNLEILPYPPSILFMYKY---LTEYDGSLLIFGKVV 255 (365)
Q Consensus 182 ~W~~~~~~~-~~~~~~~~v~~-~G~lY~~~l~~~g~i~-~d~~~~~~~~i~~p~~~~~~~~~---Lve~~G~L~lV~~~~ 255 (365)
.-....... .......+.+. +|.+.+ ...++.|. +|+....-...-.+......... +.-+...-+++....
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~--s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMV--VECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEE--EEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEE--EEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Q ss_pred CCCceEEEEeeCCCCCeEE
Q 040662 256 DGSGYRVFTFNRSQMDWFE 274 (365)
Q Consensus 256 ~~~~~~V~~ld~~~~~W~~ 274 (365)
....++||.++...+.|..
T Consensus 281 ~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTTEEEEEEECTTTCSEEE
T ss_pred CCCcEEEEEEcccccceEe
No 82
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=24.81 E-value=3.7e+02 Score=23.87 Aligned_cols=141 Identities=11% Similarity=0.052 Sum_probs=66.1
Q ss_pred CCeEEEeccccccCCCCccccEEEEcCCCCCeeeC-CCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCC
Q 040662 102 HGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINL-PAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGD 180 (365)
Q Consensus 102 ~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~L-P~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~ 180 (365)
.++|++.... .+..+++-++....+ +.+ . ...++..++.. ..+.+ +.. ....+..++...
T Consensus 87 ~~~l~~~~~~----------~I~~i~~~~~~~~~~~~~~-~---~~~gl~~d~~~-~~ly~-~D~---~~~~I~r~~~~g 147 (386)
T 3v65_B 87 EPVLLFANRI----------DIRQVLPHRSEYTLLLNNL-E---NAIALDFHHRR-ELVFW-SDV---TLDRILRANLNG 147 (386)
T ss_dssp CCEEEEECBS----------CEEEECTTSCCCEEEECSC-S---CEEEEEEETTT-TEEEE-EET---TTTEEEEEETTS
T ss_pred cceeEeecCc----------cceeeccCCCcEEEEecCC-C---ccEEEEEecCC-CeEEE-EeC---CCCcEEEEecCC
Confidence 5666666543 577777766654332 222 1 12334444432 23332 222 123455556554
Q ss_pred CceEEeeeeCCccceeeEEEE--CCEEEEEecCC-CcEEE-EEecCCceeeeecCCCceeceeEEEEe--CCcEEEEEEE
Q 040662 181 TTWTELRFQDNYRYVKNLVCA--DGFLYCSFFSL-EAIVA-YNVASQNLEILPYPPSILFMYKYLTEY--DGSLLIFGKV 254 (365)
Q Consensus 181 ~~W~~~~~~~~~~~~~~~v~~--~G~lY~~~l~~-~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~--~G~L~lV~~~ 254 (365)
...+.+... .......+++- +|.+|| .+. .+.|. ++++...-..+..... ....-++.. +|.|+....
T Consensus 148 ~~~~~~~~~-~~~~p~glavd~~~g~lY~--~d~~~~~I~~~~~dg~~~~~l~~~~l--~~P~giavdp~~g~ly~td~- 221 (386)
T 3v65_B 148 SNVEEVVST-GLESPGGLAVDWVHDKLYW--TDSGTSRIEVANLDGAHRKVLLWQSL--EKPRAIALHPMEGTIYWTDW- 221 (386)
T ss_dssp CCEEEEECS-SCSCCCCEEEETTTTEEEE--EETTTTEEEECBTTSCSCEEEECSSC--SCEEEEEEETTTTEEEEEEC-
T ss_pred CCcEEEEeC-CCCCccEEEEEeCCCeEEE--EcCCCCeEEEEeCCCCceEEeecCCC--CCCcEEEEEcCCCeEEEecc-
Confidence 444433221 12223455554 799999 776 35677 8886543222221110 111223322 455655432
Q ss_pred cCCCceEEEEeeCCC
Q 040662 255 VDGSGYRVFTFNRSQ 269 (365)
Q Consensus 255 ~~~~~~~V~~ld~~~ 269 (365)
. ..-+|++++.++
T Consensus 222 ~--~~~~I~r~~~dG 234 (386)
T 3v65_B 222 G--NTPRIEASSMDG 234 (386)
T ss_dssp S--SSCEEEEEETTS
T ss_pred C--CCCEEEEEeCCC
Confidence 1 124677777654
No 83
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=24.79 E-value=4.7e+02 Score=25.05 Aligned_cols=150 Identities=7% Similarity=0.021 Sum_probs=76.4
Q ss_pred cccEEEEcCCCCCeeeCCCCc--ccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCC-ceEEeeeeCCc---c
Q 040662 120 CSPLFFYSPFADQIINLPAWR--EFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDT-TWTELRFQDNY---R 193 (365)
Q Consensus 120 ~~~~~l~NP~T~~~~~LP~~~--~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~-~W~~~~~~~~~---~ 193 (365)
...++++|..|++...+.... ......+.+ .|. ++++++...........+.+++..++ ..+.+...... .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~--spd-g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSW--SPD-ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEE--CTT-SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEE--ECC-CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 357999999999876554321 111233344 443 34555543332223467888888877 66665432111 0
Q ss_pred ceeeEEEE---CCEEEEEecCC-Cc--EEE-EEecCCceeeeecCCCceeceeEEEEe-CCcEEEEEEEcCC-CceEEEE
Q 040662 194 YVKNLVCA---DGFLYCSFFSL-EA--IVA-YNVASQNLEILPYPPSILFMYKYLTEY-DGSLLIFGKVVDG-SGYRVFT 264 (365)
Q Consensus 194 ~~~~~v~~---~G~lY~~~l~~-~g--~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~-~G~L~lV~~~~~~-~~~~V~~ 264 (365)
....+.+. +|++.+ .+. .| .|. +|......+.+..... .....+.-+ +|+.+++....+. ....||.
T Consensus 311 ~~~~~~~sp~~dg~~l~--~~~~~g~~~l~~~~~~~~~~~~l~~~~~--~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIW--QSRRDGWNHLYLYDTTGRLIRQVTKGEW--EVTNFAGFDPKGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp CCSCCEECTTCSSEEEE--EECTTSSCEEEEEETTSCEEEECCCSSS--CEEEEEEECTTSSEEEEEESSSCTTCBEEEE
T ss_pred ccCCceeecCCCCEEEE--EEccCCccEEEEEECCCCEEEecCCCCe--EEEeeeEEcCCCCEEEEEecCCCCceEEEEE
Confidence 12344554 787654 543 34 454 5654444433322111 111112223 5765555543322 3579999
Q ss_pred eeCCCCCeEEec
Q 040662 265 FNRSQMDWFEIE 276 (365)
Q Consensus 265 ld~~~~~W~~v~ 276 (365)
+|..+.+...+.
T Consensus 387 ~d~~~~~~~~l~ 398 (706)
T 2z3z_A 387 IDIKGGKTKDLT 398 (706)
T ss_dssp EETTCCCCEESC
T ss_pred EEcCCCCceecc
Confidence 998766655554
No 84
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=23.42 E-value=2e+02 Score=24.85 Aligned_cols=90 Identities=17% Similarity=0.178 Sum_probs=52.2
Q ss_pred CCceEEeeeeCCccceeeEEEE-CCEEEEEecCCCcEEE-EEec-CCceeeeecC-CCceeceeEEEEe-CCcEEEEEEE
Q 040662 180 DTTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSLEAIVA-YNVA-SQNLEILPYP-PSILFMYKYLTEY-DGSLLIFGKV 254 (365)
Q Consensus 180 ~~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~~g~i~-~d~~-~~~~~~i~~p-~~~~~~~~~Lve~-~G~L~lV~~~ 254 (365)
...|+.+..+.. .....+++. +|.+|+ ....|.+. -+.+ ..+|+.+..| .+.......+... ++.++++...
T Consensus 193 G~tW~~~~~~~~-~~~~~~~~~~~g~~~~--~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 193 QTAWEPHNRTTS-RRLHNMGFTPDGRLWM--IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp CSSCEEEECCSS-SCEEEEEECTTSCEEE--EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST
T ss_pred CCceeECCCCCC-CccceeEECCCCCEEE--EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC
Confidence 468998865421 234455543 688988 88778766 4333 4589877655 2221111222222 5777776432
Q ss_pred cCCCceEEEEeeCCCCCeEEecc
Q 040662 255 VDGSGYRVFTFNRSQMDWFEIES 277 (365)
Q Consensus 255 ~~~~~~~V~~ld~~~~~W~~v~~ 277 (365)
-.||+-......|.++..
T Consensus 270 -----g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 270 -----GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp -----TCEEEESSTTSSCEECGG
T ss_pred -----CeEEEeCCCCcccEEcCc
Confidence 135666556789998874
No 85
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=22.75 E-value=3.4e+02 Score=22.73 Aligned_cols=129 Identities=9% Similarity=-0.037 Sum_probs=71.0
Q ss_pred eEEEcCCCCceE-EEecCCCCCCCCCCCeEEEccCCeEEEeccccccCCCCccccEEEEcCCCCCee-eCCCCcccceeE
Q 040662 69 CYLYDPCHKQKY-TVFNSDKNRTTLLGARPLDSKHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQII-NLPAWREFSIAK 146 (365)
Q Consensus 69 ~~~~~~~~~~~~-~~~l~~~~~P~~~~~~~~~s~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~ 146 (365)
...+|+.+++.. ++.+ |......=+.-.++-|+...-. .+.++++|+.|.+.+ ++|.. ...
T Consensus 45 v~~vD~~tgkv~~~~~l-----~~~~fgeGi~~~~~~ly~ltw~--------~~~v~v~D~~tl~~~~ti~~~-~~G--- 107 (243)
T 3mbr_X 45 VRKVDLETGRILQRAEV-----PPPYFGAGIVAWRDRLIQLTWR--------NHEGFVYDLATLTPRARFRYP-GEG--- 107 (243)
T ss_dssp EEEEETTTCCEEEEEEC-----CTTCCEEEEEEETTEEEEEESS--------SSEEEEEETTTTEEEEEEECS-SCC---
T ss_pred EEEEECCCCCEEEEEeC-----CCCcceeEEEEeCCEEEEEEee--------CCEEEEEECCcCcEEEEEeCC-CCc---
Confidence 367788887755 3555 4311011012235667766554 478999999998854 33322 111
Q ss_pred EEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCce-EEeeee---CCccceeeEEEECCEEEEEecC-CCcEEE-EEe
Q 040662 147 ATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTW-TELRFQ---DNYRYVKNLVCADGFLYCSFFS-LEAIVA-YNV 220 (365)
Q Consensus 147 ~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W-~~~~~~---~~~~~~~~~v~~~G~lY~~~l~-~~g~i~-~d~ 220 (365)
.+++.+ ++ .++++.. ...+.+.++.+.+= +.+... ..+.......+.+|++|+ -. ....|+ +|+
T Consensus 108 wglt~d---g~-~L~vSdg----s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lya--nvw~s~~I~vIDp 177 (243)
T 3mbr_X 108 WALTSD---DS-HLYMSDG----TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLA--NVWLTSRIARIDP 177 (243)
T ss_dssp CEEEEC---SS-CEEEECS----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE--EETTTTEEEEECT
T ss_pred eEEeeC---CC-EEEEECC----CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEE--EECCCCeEEEEEC
Confidence 234333 22 3333442 24688888887532 233321 112234556677999998 54 346777 999
Q ss_pred cCCc
Q 040662 221 ASQN 224 (365)
Q Consensus 221 ~~~~ 224 (365)
.+.+
T Consensus 178 ~tG~ 181 (243)
T 3mbr_X 178 ASGK 181 (243)
T ss_dssp TTCB
T ss_pred CCCC
Confidence 8764
No 86
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=22.69 E-value=3e+02 Score=22.15 Aligned_cols=104 Identities=15% Similarity=0.110 Sum_probs=55.2
Q ss_pred cCCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCC
Q 040662 101 KHGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGD 180 (365)
Q Consensus 101 ~~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~ 180 (365)
.+|-|++.+.. +.++++|+-++....++.. ... .-..+..++. +. +++... ....+..++.++
T Consensus 76 ~~g~l~v~~~~---------~~i~~~d~~~~~~~~~~~~-~~~-~p~~i~~~~~-g~--l~v~~~---~~~~i~~~~~~~ 138 (270)
T 1rwi_B 76 GAGTVYVTDFN---------NRVVTLAAGSNNQTVLPFD-GLN-YPEGLAVDTQ-GA--VYVADR---GNNRVVKLAAGS 138 (270)
T ss_dssp TTCCEEEEETT---------TEEEEECTTCSCCEECCCC-SCS-SEEEEEECTT-CC--EEEEEG---GGTEEEEECTTC
T ss_pred CCCCEEEEcCC---------CEEEEEeCCCceEeeeecC-CcC-CCcceEECCC-CC--EEEEEC---CCCEEEEEECCC
Confidence 35666666543 5799999988776655432 111 1112333442 23 333332 123566666665
Q ss_pred CceEEeeeeCCccceeeEEEE-CCEEEEEecCC-CcEEE-EEecCCc
Q 040662 181 TTWTELRFQDNYRYVKNLVCA-DGFLYCSFFSL-EAIVA-YNVASQN 224 (365)
Q Consensus 181 ~~W~~~~~~~~~~~~~~~v~~-~G~lY~~~l~~-~g~i~-~d~~~~~ 224 (365)
......... .......+++. +|.+|+ .+. .+.|. +|++...
T Consensus 139 ~~~~~~~~~-~~~~p~~i~~~~~g~l~v--~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 139 KTQTVLPFT-GLNDPDGVAVDNSGNVYV--TDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CSCEECCCC-SCCSCCCEEECTTCCEEE--EEGGGTEEEEECTTTCC
T ss_pred ceeEeeccc-cCCCceeEEEeCCCCEEE--EECCCCEEEEEecCCCc
Confidence 544332211 11234455555 689988 765 46777 9987654
No 87
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=21.61 E-value=3.3e+02 Score=22.21 Aligned_cols=51 Identities=4% Similarity=-0.017 Sum_probs=28.6
Q ss_pred EEEEEEecCCCceEEeeeeCCccceeeEEEE--CCEEEEEecCC-CcEEE-EEecCCc
Q 040662 171 SCISICRPGDTTWTELRFQDNYRYVKNLVCA--DGFLYCSFFSL-EAIVA-YNVASQN 224 (365)
Q Consensus 171 ~~~~~~~~g~~~W~~~~~~~~~~~~~~~v~~--~G~lY~~~l~~-~g~i~-~d~~~~~ 224 (365)
..+..++.....-+.+. +........+++. +|.+|+ .+. .+.|. +|++...
T Consensus 58 ~~I~~~~~~g~~~~~~~-~~~~~~p~~ia~d~~~~~lyv--~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 58 PSIGRASLHGGEPTTII-RQDLGSPEGIALDHLGRTIFW--TDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp TEEEEEESSSCCCEEEE-CTTCCCEEEEEEETTTTEEEE--EETTTTEEEEEETTSCS
T ss_pred CEEEEEecCCCCcEEEE-ECCCCCccEEEEEecCCeEEE--EECCCCEEEEEEcCCCC
Confidence 35666665433222221 1112245566665 589998 776 46788 9987643
No 88
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=21.10 E-value=5.3e+02 Score=24.37 Aligned_cols=144 Identities=13% Similarity=0.035 Sum_probs=73.1
Q ss_pred ccEEEEcCC-CC---CeeeCCCCcccceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEEEecCCCceEEeeeeC-Cc--c
Q 040662 121 SPLFFYSPF-AD---QIINLPAWREFSIAKATFSATPISPDCVVFVTWVGIMEISCISICRPGDTTWTELRFQD-NY--R 193 (365)
Q Consensus 121 ~~~~l~NP~-T~---~~~~LP~~~~~~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~~~~g~~~W~~~~~~~-~~--~ 193 (365)
..++++|.- ++ +...|..-.......+.+ .|. +. ++++.... ....+..++..++.++.+.... .. +
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~--spd-g~-l~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~~~~~p 290 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEW--APD-GS-LIVATDRT--GWWNLHRVDPATGAATQLCRREEEFAGP 290 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEE--CTT-SC-EEEEECTT--SSCEEEEECTTTCCEEESSCCSSBSSCC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEE--CCC-Ce-EEEEECCC--CCeEEEEEECCCCceeecccccccccCc
Confidence 579999988 57 444443210111223333 443 33 44433322 2346777777677777664321 11 0
Q ss_pred ----ceeeEEEE-CCEEEEEecCCCc--EEE-EEecCCceeeeecCCCceeceeEE-EEeCCcEEEEEEEcCCCceEEEE
Q 040662 194 ----YVKNLVCA-DGFLYCSFFSLEA--IVA-YNVASQNLEILPYPPSILFMYKYL-TEYDGSLLIFGKVVDGSGYRVFT 264 (365)
Q Consensus 194 ----~~~~~v~~-~G~lY~~~l~~~g--~i~-~d~~~~~~~~i~~p~~~~~~~~~L-ve~~G~L~lV~~~~~~~~~~V~~ 264 (365)
....+++. +|.+++ ....+ .|. +|+++...+.+..+... . ..+ ...++.++++.... .....||.
T Consensus 291 ~w~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~d~~~~~~~~l~~~~~~--~-~~~~s~~~~~~~~~~~~~-~~~~~i~~ 364 (662)
T 3azo_A 291 LWTPGMRWFAPLANGLIAV--VHGKGAAVLGILDPESGELVDAAGPWTE--W-AATLTVSGTRAVGVAASP-RTAYEVVE 364 (662)
T ss_dssp CCSTTCCSEEECTTSCEEE--EEBSSSCEEEEEETTTTEEEECCSSCCE--E-EEEEEEETTEEEEEEEET-TEEEEEEE
T ss_pred cccccCceEeEeCCCEEEE--EEEcCccEEEEEECCCCcEEEecCCCCe--E-EEEEecCCCEEEEEEcCC-CCCCEEEE
Confidence 13455665 677765 43224 455 68766555444332211 1 112 22345555554443 45678999
Q ss_pred eeCCCCCeEEec
Q 040662 265 FNRSQMDWFEIE 276 (365)
Q Consensus 265 ld~~~~~W~~v~ 276 (365)
+|..+++..++.
T Consensus 365 ~d~~~g~~~~l~ 376 (662)
T 3azo_A 365 LDTVTGRARTIG 376 (662)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCceEEee
Confidence 988777666654
No 89
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=20.58 E-value=4.3e+02 Score=23.11 Aligned_cols=191 Identities=7% Similarity=0.013 Sum_probs=0.0
Q ss_pred CCeEEEeccccccCCCCccccEEEEcCCCCCeeeCCCCccc------ceeEEEEecCCCCCCeEEEEEeCCCcCeEEEEE
Q 040662 102 HGWVLFEGEKNVNSGGRKCSPLFFYSPFADQIINLPAWREF------SIAKATFSATPISPDCVVFVTWVGIMEISCISI 175 (365)
Q Consensus 102 ~G~l~~~~~~~~~~~~~~~~~~~l~NP~T~~~~~LP~~~~~------~~~~~~ls~~p~s~~~~v~v~~~~~~~~~~~~~ 175 (365)
+|.+++.... .+.+.++|+.|++.....+. .. ....+.++.+ ..+++... ....+.+
T Consensus 133 ~~~~~~~~~~--------~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~v~~~~~~~~----~~~~~s~~----~d~~v~~ 195 (433)
T 3bws_A 133 NTRLAIPLLE--------DEGMDVLDINSGQTVRLSPP-EKYKKKLGFVETISIPEH----NELWVSQM----QANAVHV 195 (433)
T ss_dssp SSEEEEEBTT--------SSSEEEEETTTCCEEEECCC-HHHHTTCCEEEEEEEGGG----TEEEEEEG----GGTEEEE
T ss_pred CCeEEEEeCC--------CCeEEEEECCCCeEeeecCc-ccccccCCceeEEEEcCC----CEEEEEEC----CCCEEEE
Q ss_pred EecCCCceEEeeeeCCccceeeEEEE--CCEEEEEecC-CCcEEE-EEecCCceeeeecCCCceeceeEEEEeCCcEEEE
Q 040662 176 CRPGDTTWTELRFQDNYRYVKNLVCA--DGFLYCSFFS-LEAIVA-YNVASQNLEILPYPPSILFMYKYLTEYDGSLLIF 251 (365)
Q Consensus 176 ~~~g~~~W~~~~~~~~~~~~~~~v~~--~G~lY~~~l~-~~g~i~-~d~~~~~~~~i~~p~~~~~~~~~Lve~~G~L~lV 251 (365)
|+..+..-...-... ......+.+. +..+|+ .+ ..+.|. +|+.+. +.+...............-+|+.+++
T Consensus 196 ~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 196 FDLKTLAYKATVDLT-GKWSKILLYDPIRDLVYC--SNWISEDISVIDRKTK--LEIRKTDKIGLPRGLLLSKDGKELYI 270 (433)
T ss_dssp EETTTCCEEEEEECS-SSSEEEEEEETTTTEEEE--EETTTTEEEEEETTTT--EEEEECCCCSEEEEEEECTTSSEEEE
T ss_pred EECCCceEEEEEcCC-CCCeeEEEEcCCCCEEEE--EecCCCcEEEEECCCC--cEEEEecCCCCceEEEEcCCCCEEEE
Q ss_pred EEEcCCCce----EEEEeeCCCCCeEEeccCCCeEEEeccCCCCCCCCCCeEEEeeeCCCceEEEEcCceee
Q 040662 252 GKVVDGSGY----RVFTFNRSQMDWFEIESLDDRVLFTGASCLWVPVEKGSAFANTVHWFGRYSYIRDVCRE 319 (365)
Q Consensus 252 ~~~~~~~~~----~V~~ld~~~~~W~~v~~lg~~~lfvg~~~~~~~~~~n~IYf~~~~~~~~~vy~l~~~~~ 319 (365)
......... .|+.+|..+.+-......++...-+. +.-.++.+|+....+....+|++++++.
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~g~~l~~~~~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIV-----SGNTENKIYVSDMCCSKIEVYDLKEKKV 337 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEE-----ECSSTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEE-----ECCCCCEEEEEecCCCEEEEEECCCCcE
No 90
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=20.34 E-value=38 Score=20.40 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=12.4
Q ss_pred CCCCChHHHHHHHHhcC
Q 040662 16 SWSDLPLEIINSIVSRL 32 (365)
Q Consensus 16 ~w~~LP~Dll~~Il~rL 32 (365)
-...||.||-.+|++.-
T Consensus 20 VF~~LP~dIQ~Ells~~ 36 (48)
T 2kwv_A 20 VFKQLPADIQEEILSGK 36 (48)
T ss_dssp GTTTSCHHHHHHHTTCC
T ss_pred HHHHCcHHHHHHHHhcc
Confidence 45678888888887654
Done!