BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040664
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8N1X3|PESC_COPC7 Pescadillo homolog OS=Coprinopsis cinerea (strain Okayama-7 / 130 /
ATCC MYA-4618 / FGSC 9003) GN=NOP7 PE=3 SV=1
Length = 611
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 44 PDVQQISTE----DMSKLLMSRKKRGLYEAMKKGQERKKAHVDLLKQRKKKIEAA 94
PD +TE DM+K++MS K+R LYE MK Q++K A + L+QRKK+++ A
Sbjct: 554 PDTASKATEEAEKDMNKMMMSNKQRKLYEKMKYSQQKKAAEKEKLEQRKKQLQKA 608
>sp|Q6BXL7|PESC_DEBHA Pescadillo homolog OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=NOP7 PE=3
SV=1
Length = 600
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 30/40 (75%)
Query: 53 DMSKLLMSRKKRGLYEAMKKGQERKKAHVDLLKQRKKKIE 92
D+ K++MS K+R LY+ M+ G ++K+A D L ++++K+E
Sbjct: 548 DLKKIMMSNKQRKLYKKMQYGIDKKEARQDDLTKKRRKLE 587
>sp|Q75EI5|PESC_ASHGO Pescadillo homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=NOP7 PE=3 SV=1
Length = 596
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 10 ELKMELDGFKYSSSVSDATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKKRGLYEA 69
EL++E G YS + A K + + ++ +D+ ++MS K+R L++
Sbjct: 508 ELELEAQGVTYSEAADSAAPSKKASKQKKRKT-----EEEEEKDLKLIMMSNKQRKLFKK 562
Query: 70 MKKGQERKKAHVDLLKQRKKKI 91
MK ++K+ ++ LKQ+KK+I
Sbjct: 563 MKYSNQQKEQEIETLKQKKKQI 584
>sp|A6SK81|PESC_BOTFB Pescadillo homolog OS=Botryotinia fuckeliana (strain B05.10)
GN=nop7 PE=3 SV=1
Length = 680
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 55 SKLLMSRKKRGLYEAMKKGQERKKAHVDLLKQRKKKIE 92
SK++MSRKKR + E M ++K A + L+ +++KIE
Sbjct: 634 SKMMMSRKKRKILEKMVYSNKKKDAEAEALRAKRRKIE 671
>sp|A7EGB5|PESC_SCLS1 Pescadillo homolog OS=Sclerotinia sclerotiorum (strain ATCC 18683 /
1980 / Ss-1) GN=nop7 PE=3 SV=1
Length = 680
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 55 SKLLMSRKKRGLYEAMKKGQERKKAHVDLLKQRKKKIE 92
SK++MSRKKR + E M ++K A + L+ +++KIE
Sbjct: 634 SKMMMSRKKRKILEKMVYSNKKKDAEAEALRAKRRKIE 671
>sp|O60164|PESC_SCHPO Pescadillo homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ppp1 PE=3 SV=1
Length = 607
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 54 MSKLLMSRKKRGLYEAMKKGQERKKAHVDLLKQRKKKIEAAEKFK 98
+SK++MS K+R LY +K + + + + L+ RK+ IE +K K
Sbjct: 560 LSKMMMSNKQRKLYSKLKNENSKNENYNNALRNRKRDIEKRKKLK 604
>sp|Q6CQQ1|PESC_KLULA Pescadillo homolog OS=Kluyveromyces lactis (strain ATCC 8585 / CBS
2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=NOP7 PE=3 SV=1
Length = 605
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 57 LLMSRKKRGLYEAMKKGQERKKAHVDLLKQRKKKI 91
++MS K+R LY+ MK E+K ++ LKQ+KK+I
Sbjct: 558 IMMSNKQRKLYKKMKYSNEKKDEKIEQLKQKKKQI 592
>sp|Q3IRY6|COFD_NATPD 2-phospho-L-lactate transferase OS=Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678) GN=cofD PE=3 SV=1
Length = 334
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 35 DMETGEEPLPDVQQISTEDMSKLLMSRKKRGLYEAMKKGQERKKAHV---DLLKQRKKKI 91
D++TG LPD +Q + D+++ R+ G+ E M+ G + H+ LL + K+
Sbjct: 86 DLDTGPRYLPDKKQTAGRDIARW---RRFSGVAEFMEIGDTDRAVHITRTSLLDEGKRLT 142
Query: 92 EA 93
EA
Sbjct: 143 EA 144
>sp|A5DGY0|PESC_PICGU Pescadillo homolog OS=Meyerozyma guilliermondii (strain ATCC 6260 /
CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=NOP7 PE=3 SV=2
Length = 585
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 10 ELKMELDGFKYSSSVSDATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKKRGLYEA 69
EL+ME G K+S +V D K+ S + EE +D+ K++M+ K+R LY
Sbjct: 503 ELEMEASGVKFSDTVEDKKKKPSKKRSAEEEE----------KDLKKIMMTNKQRKLYNK 552
Query: 70 MKKGQERKKAHVD 82
M+ G +K+ D
Sbjct: 553 MQYGINKKETRQD 565
>sp|Q6C6D1|NSA2_YARLI Ribosome biogenesis protein NSA2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=NSA2 PE=3 SV=1
Length = 262
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 21 SSSVSDATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKKR 64
+ ++S + KQK E + PLP V+ IS E+M K+L S K+R
Sbjct: 101 AKALSSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVLKSGKRR 144
>sp|B0CQL7|PESC_LACBS Pescadillo homolog OS=Laccaria bicolor (strain S238N-H82 / ATCC
MYA-4686) GN=NOP7 PE=3 SV=1
Length = 606
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 42 PLPDVQQISTEDMSKLLMSRKKRGLYEAMKKGQERKKAHV 81
P+ D + +DM+K++MS K++ LYE MK Q++K+ V
Sbjct: 546 PITDGVEDGEKDMNKMMMSNKQKKLYEKMKYSQKKKEIEV 585
>sp|Q2UGQ8|PESC_ASPOR Pescadillo homolog OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=nop7 PE=3 SV=1
Length = 681
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 6 QYHDELKMELDGFKYSSSVS--DATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKK 63
Q+ EL+ E G +SSS + D+TK+KS + + + ++ + K++MSRKK
Sbjct: 591 QHQKELEAEAAGLPFSSSSAGGDSTKKKSSQAKKVASK---KRKEEEELERQKMMMSRKK 647
Query: 64 RGLYEAMKKGQERKKAHVDLLKQRKKKIE-AAEK 96
R L E M +++ L+ +++K+E AEK
Sbjct: 648 RKLLEKMMYSNKKQSEEAAKLRSKRRKLEKGAEK 681
>sp|A6RBB0|PESC_AJECN Pescadillo homolog OS=Ajellomyces capsulata (strain NAm1 / WU24)
GN=NOP7 PE=3 SV=2
Length = 723
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 56 KLLMSRKKRGLYEAMKKGQERKKAHVDLLKQRKKKIE 92
K++MSRKKR L + M +++ A + L+Q+++KIE
Sbjct: 681 KMMMSRKKRKLLDKMIYSNKKQDAEAEKLRQKRRKIE 717
>sp|P40078|NSA2_YEAST Ribosome biogenesis protein NSA2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NSA2 PE=1 SV=1
Length = 261
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 23 SVSDATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKKR 64
++S + KQK E + PLP V+ IS E+M K++ + K R
Sbjct: 102 AISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVIKTGKSR 143
>sp|A6ZR80|NSA2_YEAS7 Ribosome biogenesis protein NSA2 OS=Saccharomyces cerevisiae
(strain YJM789) GN=NSA2 PE=3 SV=1
Length = 261
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 23 SVSDATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKKR 64
++S + KQK E + PLP V+ IS E+M K++ + K R
Sbjct: 102 AISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVIKTGKSR 143
>sp|Q54GN8|NSA2_DICDI Ribosome biogenesis protein NSA2 homolog OS=Dictyostelium
discoideum GN=nsa2 PE=3 SV=1
Length = 260
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 13 MELDGFKYSSSVSDATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKK 63
++ +G + +S+ KQK E + PLP V+ IS ++M K++ S K+
Sbjct: 91 LDREGVSRAKVLSNMVKQKRKEKAGKWDVPLPKVRAISEDEMFKVVKSGKR 141
>sp|A6R3Q6|NSA2_AJECN Ribosome biogenesis protein NSA2 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=NSA2 PE=3 SV=1
Length = 261
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 23 SVSDATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKK 63
S+S A K K E PLP V+ IS E+M K++ + KK
Sbjct: 101 SLSSAIKNKRAEKAAQFSVPLPKVKGISEEEMFKVVKTGKK 141
>sp|Q0UV95|NSA2_PHANO Ribosome biogenesis protein NSA2 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=NSA2 PE=3 SV=1
Length = 261
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 19 KYSSSVSDATKQKSGEDMETGEEPLPDVQQISTEDMSKLLMSRKK 63
K + ++S A KQK E PLP V+ IS E+M ++ + KK
Sbjct: 97 KNAKALSSAIKQKRNEKAARFSVPLPKVKGISEEEMFSVVKTGKK 141
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.124 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,314,472
Number of Sequences: 539616
Number of extensions: 1252671
Number of successful extensions: 4344
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 4183
Number of HSP's gapped (non-prelim): 253
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 55 (25.8 bits)