BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040668
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIA4|MATE5_ARATH MATE efflux family protein 5 OS=Arabidopsis thaliana GN=DTXL1 PE=3
SV=1
Length = 476
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 56 EVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSLL 111
E+K++ S+A PM AV ++QY L VISVM+ GH GEL LS A+A SF+ V+GFS+L
Sbjct: 27 ELKKVSSLAAPMAAVTIAQYLLPVISVMVAGHNGELQLSGVALATSFTNVSGFSIL 82
>sp|Q9SIA5|DTX1_ARATH MATE efflux family protein DTX1 OS=Arabidopsis thaliana GN=DTX1
PE=2 SV=1
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 41/56 (73%)
Query: 56 EVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSLL 111
E+KR+ +A PM V ++QY L VISVM+ GH GEL LS A+A SF+ VTGFS++
Sbjct: 27 ELKRVSRLAAPMATVTIAQYLLPVISVMVAGHNGELQLSGVALANSFTNVTGFSIM 82
>sp|Q8GXM8|MATE7_ARATH MATE efflux family protein 7 OS=Arabidopsis thaliana GN=DTXL3 PE=2
SV=1
Length = 476
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 42/56 (75%)
Query: 56 EVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSLL 111
E+K++ +A PM V ++QY L VISVM+ GH+GEL L+ A+A SF+ V+GFS++
Sbjct: 27 ELKKVSRLAAPMATVTIAQYLLPVISVMVAGHIGELELAGVALATSFTNVSGFSIM 82
>sp|Q9SIA1|MATE8_ARATH MATE efflux family protein 8 OS=Arabidopsis thaliana GN=DTXL4 PE=3
SV=2
Length = 477
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSLL 111
+ E+K + S+A PM V +SQY L VISVM+ GH GEL LS +A +F+ V+GF ++
Sbjct: 27 FTAELKNVSSMAAPMATVTVSQYLLPVISVMVAGHCGELQLSGVTLATAFANVSGFGIM 85
>sp|Q9SIA3|MATE6_ARATH MATE efflux family protein 6 OS=Arabidopsis thaliana GN=DTXL2 PE=3
SV=2
Length = 476
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 56 EVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSLL 111
E+K++ +A PM V ++QY L VISVM+ GH GEL LS A+A SF+ V+GFS++
Sbjct: 27 ELKKVSRLAVPMATVTIAQYLLPVISVMVAGHNGELQLSGVALATSFTNVSGFSIM 82
>sp|Q8RWF5|MATE9_ARATH MATE efflux family protein 9 OS=Arabidopsis thaliana GN=DTXL5 PE=2
SV=1
Length = 483
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSLL 111
+ E+K L +A PM V ++QY L VISVM+ GH EL LS A+A SF+ V+GFS++
Sbjct: 27 FTAELKNLSRMALPMATVTVAQYLLPVISVMVAGHRSELQLSGVALATSFTNVSGFSVM 85
>sp|Q8K0H1|S47A1_MOUSE Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1
PE=1 SV=2
Length = 567
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
++EE++ L +AGP L + + IS + GHLG+L L + +AI+ VTG S+
Sbjct: 31 FLEELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISV 88
>sp|Q9LUH2|ALF5_ARATH MATE efflux family protein ALF5 OS=Arabidopsis thaliana GN=ALF5
PE=2 SV=1
Length = 477
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 46 TVVTADVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAV 105
T+V + +EE K + PM+ N+ Y + + SVM HLG+L L+ +A S++ V
Sbjct: 29 TLVQKVIDVEEAKAQMIYSLPMILTNVFYYCIPITSVMFASHLGQLELAGATLANSWATV 88
Query: 106 TGFSLL 111
+GF+ +
Sbjct: 89 SGFAFM 94
>sp|Q9LUH3|LAL5_ARATH MATE efflux family protein LAL5 OS=Arabidopsis thaliana GN=LAL5
PE=2 SV=1
Length = 469
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 46 TVVTADVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAV 105
T V + +EE K + PM+ NL Y + + SVM LG+L L+ +A S++ V
Sbjct: 21 TFVQKLIDVEEAKTQIIYSLPMIFTNLFYYCIPLTSVMFASQLGQLELAGATLANSWATV 80
Query: 106 TGFSLL 111
TGF+ +
Sbjct: 81 TGFAFM 86
>sp|Q96FL8|S47A1_HUMAN Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1
PE=1 SV=1
Length = 570
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 55 EEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
EE++ L +AGP V L + + IS + GHLG+L L + +AI+ VTG S+
Sbjct: 33 EELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSV 88
>sp|Q5RFD2|S47A1_PONAB Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1
PE=2 SV=1
Length = 570
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 55 EEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
EE++ L +AGP V L + + IS + GHLG+L L + +AI+ VTG S+
Sbjct: 33 EELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSV 88
>sp|Q5I0E9|S47A1_RAT Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus
GN=Slc47a1 PE=1 SV=1
Length = 566
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
+ EE++ L +AGP L + + IS + GHLG+L L + +AI+ VTG S+
Sbjct: 30 FQEELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISV 87
>sp|Q9UT92|YL47_SCHPO Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC323.07c PE=1 SV=1
Length = 533
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 54 IEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSLL 111
+ E+ RLGS P V L Q S Q +V +GHLG+ +L++++++ +A++ FS+
Sbjct: 91 LSELLRLGS---PTVIAYLLQSSEQFSTVFTLGHLGKEYLAASSLSTMTAAISAFSIF 145
>sp|Q3V050|S47A2_MOUSE Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2
PE=1 SV=1
Length = 573
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 56 EVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
E L ++AGP+ L + + ++S + GHLG++ L + +A+S VTG S+
Sbjct: 43 EAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISV 97
>sp|A1L1P9|S47A1_DANRE Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1
PE=2 SV=1
Length = 590
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 41 CGEDLTVVTADVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAI 100
C + L + Y E+ L +AGP+ L + + +S + GHLG+ L+ A+AI
Sbjct: 37 CRKKLRSLLPVNYKTEIVELLKLAGPVFISQLMIFLISFVSTVFCGHLGKTELAGVALAI 96
Query: 101 SFSAVTGFSL 110
+ VTG S+
Sbjct: 97 AVINVTGISI 106
>sp|Q86VL8|S47A2_HUMAN Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2
PE=1 SV=1
Length = 602
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 28 EDLTVLLAKDKVECGEDLTVVTADVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGH 87
+ L +A D C L+ + + E+ L +++GP+ + + + ++S + GH
Sbjct: 2 DSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCGH 61
Query: 88 LGELFLSSTAIAISFSAVTGFSL 110
LG++ L+S +A++F V G S+
Sbjct: 62 LGKVELASVTLAVAFVNVCGVSV 84
>sp|Q5R7E4|S47A2_PONAB Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2
PE=2 SV=1
Length = 581
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 56 EVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
E+ L +++GP+ + + + ++S + GHLG++ L+S +A++F V G S+
Sbjct: 30 EMWTLFALSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSV 84
>sp|Q89AX2|NORM_BUCBP Probable multidrug resistance protein NorM OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=norM PE=3 SV=1
Length = 451
Score = 36.2 bits (82), Expect = 0.053, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
++ E+K L I P+ +SQ S+ +I+ +M+GHL E +++ ++ IS
Sbjct: 4 HLHEIKMLLKITIPIFLAQISQTSMSLINSIMIGHLKENNIAAISVGIS 52
>sp|Q98D15|NORM_RHILO Probable multidrug resistance protein NorM OS=Rhizobium loti
(strain MAFF303099) GN=norM PE=3 SV=1
Length = 467
Score = 36.2 bits (82), Expect = 0.069, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 51 DVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIA 99
+++ +E++ ++A PMV NL Q ++ VMM+G LG L+S A+
Sbjct: 13 NLWRQEIRATLALAWPMVLTNLGQTAMTATDVMMMGRLGPDTLASGALG 61
>sp|A7KAU3|S47A2_RABIT Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus
GN=SLC47A2 PE=1 SV=1
Length = 601
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
+ +E + L ++GP+ + + V+ + GHLG++ L+S + ++F V G S+
Sbjct: 56 FWDEARALFVLSGPLFLFQVLNFLTYVVGTVFCGHLGKVELASVTLGVAFVNVCGVSV 113
>sp|Q9USK3|YJ2D_SCHPO Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC4B3.13 PE=3 SV=1
Length = 539
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 55 EEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
+E+ L A P+V +L QY V +V +GHLG+ L++ +++ + +T F++
Sbjct: 95 KELTLLIKFATPVVLTSLLQYGEVVTTVFSLGHLGKTELAAASLSNMTATITAFAI 150
>sp|Q7WAK9|NORM_BORPA Probable multidrug resistance protein NorM OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=norM PE=3 SV=1
Length = 460
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 66 PMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS-FSAVTGFSL 110
P+V NL+Q ++ V V+ +G LG L+++A+ + F+A+ F L
Sbjct: 23 PLVLTNLAQMAMTVTDVIFIGRLGSQALAASALGANLFTAIEFFGL 68
>sp|Q7WJR0|NORM_BORBR Probable multidrug resistance protein NorM OS=Bordetella
bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
GN=norM PE=3 SV=1
Length = 460
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 66 PMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS-FSAVTGFSL 110
P+V NL+Q ++ V V+ +G LG L+++A+ + F+A+ F L
Sbjct: 23 PLVLTNLAQMAMTVTDVIFIGRLGSQALAASALGANLFTAIEFFGL 68
>sp|Q8G2I1|NORM_BRUSU Probable multidrug resistance protein NorM OS=Brucella suis biovar
1 (strain 1330) GN=norM PE=3 SV=1
Length = 471
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 46 TVVTADVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISF 102
T+ A+ + E+ + P++ NLSQ +L V+ +G LG L+S +A SF
Sbjct: 13 TISKANRWGREMVVALKLGWPLIFTNLSQAALTATDVIFIGRLGADTLASALLATSF 69
>sp|Q8YFD7|NORM_BRUME Probable multidrug resistance protein NorM OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=norM
PE=3 SV=1
Length = 471
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 46 TVVTADVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISF 102
T+ A+ + E+ + P++ NLSQ +L V+ +G LG L+S +A SF
Sbjct: 13 TISKANRWGREMVVALKLGWPLIFTNLSQAALTATDVIFIGRLGADTLASALLATSF 69
>sp|Q9JV27|NORM_NEIMA Probable multidrug resistance protein NorM OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=norM PE=3 SV=1
Length = 459
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 44 DLTVVTADVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
DL + V+++EV+ L ++A PM+ ++Q + + +M G G+ L++ A+ S
Sbjct: 4 DLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGSS 61
>sp|Q6D5W6|MDTK_ERWCT Multidrug resistance protein MdtK OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=mdtK
PE=3 SV=1
Length = 457
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
Y+ E ++L ++A P++ +SQ S+ V+ +M G +++ A+ S
Sbjct: 4 YLTEARKLSALAVPVIIAQVSQTSMGVVDTIMAGAYSATDMAAVAVGTS 52
>sp|Q9K015|NORM_NEIMB Probable multidrug resistance protein NorM OS=Neisseria
meningitidis serogroup B (strain MC58) GN=norM PE=3 SV=1
Length = 459
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 44 DLTVVTADVYIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
DL + V+++EV+ L ++A PM+ ++Q + + +M G G+ L++ A+ S
Sbjct: 4 DLNRFSFPVFLKEVRLLTTLALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGSS 61
>sp|A7ICB3|RLMN_XANP2 Dual-specificity RNA methyltransferase RlmN OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=rlmN PE=3
SV=1
Length = 414
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 14 MDKGLLAKDEVEGREDLTVLLAKDKVECGEDLTVVTADVYIEEVKRLGSIAGPMVAVNL 72
M + L A D V +E + L D + G+ V+ + E++RLG+ GPM+A++L
Sbjct: 213 MGEPLYAYDSV--KEAIETLSDGDGLGLGKRRITVSTSGVVPEIERLGAEVGPMLAISL 269
>sp|A1JPA1|MDTK_YERE8 Multidrug resistance protein MdtK OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=mdtK PE=3
SV=1
Length = 457
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|Q10085|YAO6_SCHPO Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC11D3.06 PE=3 SV=1
Length = 455
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 54 IEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGF 108
+ EVK L + P++ Q SLQ SV++ G LG LS A A F+ TG+
Sbjct: 5 LTEVKYLLINSAPVILGYALQNSLQTSSVIVTGRLGPSELSVAAFAYMFAMSTGW 59
>sp|B1JJ53|MDTK_YERPY Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=mdtK PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|Q66A27|MDTK_YERPS Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=mdtK PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|A4TIP9|MDTK_YERPP Multidrug resistance protein MdtK OS=Yersinia pestis (strain
Pestoides F) GN=mdtK PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|Q1CIK5|MDTK_YERPN Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=mdtK PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|A9QZC0|MDTK_YERPG Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=mdtK PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|Q8ZDZ8|MDTK_YERPE Multidrug resistance protein MdtK OS=Yersinia pestis GN=mdtK PE=3
SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|B2K5I9|MDTK_YERPB Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=mdtK PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|Q1C769|MDTK_YERPA Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=mdtK PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|A7FHJ7|MDTK_YERP3 Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=mdtK PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI E + L ++A P+V LSQ ++ V+ +M G + +++ A+ S
Sbjct: 4 YIVEARSLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTS 52
>sp|Q9HTR0|NORM_PSEAE Probable multidrug resistance protein NorM OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=norM PE=3 SV=1
Length = 488
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 56 EVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAI-AISFSAVTGF 108
E+K + +AGP++A L+ ++ +M+G LG L++ + A+S++ V+ F
Sbjct: 8 ELKAILRLAGPLIAAQLAYVAMVFTDTVMMGKLGPDALAAGGLGAVSYAFVSTF 61
>sp|Q5QWR6|NORM_IDILO Probable multidrug resistance protein NorM OS=Idiomarina loihiensis
(strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=norM PE=3
SV=1
Length = 462
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 56 EVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
E +L + GP++ L+Q + V+ +M G G L L++ ++ S
Sbjct: 10 EFNKLAKLTGPILVAQLTQMLMSVVDTVMAGRKGALDLAAVSVGGS 55
>sp|A7KAU2|S47A1_RABIT Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus
GN=SLC47A1 PE=2 SV=1
Length = 568
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 55 EEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAVTGFSL 110
EE++ L +A P L + + +S + GHL +L L++ +AI+ V G S+
Sbjct: 32 EELRALLVLACPAFLAQLMVFLISFVSSVFCGHLSKLELNAVTLAIAVINVMGVSV 87
>sp|B4EWN4|MDTK_PROMH Multidrug resistance protein MdtK OS=Proteus mirabilis (strain
HI4320) GN=mdtK PE=3 SV=1
Length = 457
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
YI+E + L ++ P++ SQ ++ V+ +M G + +S+ A+ S
Sbjct: 4 YIKEARSLLALGIPVIIAQFSQTAMGVVDTVMAGAVNATEMSAVAVGTS 52
>sp|Q7N3V2|MDTK_PHOLL Multidrug resistance protein MdtK OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=mdtK PE=3 SV=1
Length = 457
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 27/49 (55%)
Query: 53 YIEEVKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAIS 101
Y++E + L ++ P++ SQ ++ V+ +M G + +S+ A+ S
Sbjct: 4 YLKEARSLLALGIPVIIAQFSQTAMGVVDTVMAGSVSATDMSAVAVGTS 52
>sp|A8IQ73|RLMN_AZOC5 Dual-specificity RNA methyltransferase RlmN OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=rlmN PE=3 SV=1
Length = 406
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 14 MDKGLLAKDEVEGREDLTVLLAKDKVECGEDLTVVTADVYIEEVKRLGSIAGPMVAVNL 72
M + L A D V E + +L D + G+ V+ + E+++LG GPM+A++L
Sbjct: 205 MGEPLYAYDSVA--EAIEILADGDGLGLGKRRITVSTSGVVPEIEKLGREVGPMLAISL 261
>sp|Q8G2M6|BEPE_BRUSU Efflux pump membrane transporter BepE OS=Brucella suis biovar 1
(strain 1330) GN=bepE PE=1 SV=1
Length = 1051
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 57 VKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGEL---FLSSTAIAISFSAVTGFSL 110
+K +G + GP++A+ L ++ + M G +GE+ F + AI+++ S + +L
Sbjct: 434 IKAMGEVTGPVIAIVLVLCAVFIPVAFMGGLVGEMYKQFAVTIAISVTLSGLVALTL 490
>sp|B4SG54|HRCA_PELPB Heat-inducible transcription repressor HrcA OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=hrcA
PE=3 SV=1
Length = 350
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 8 VRDKEEMDKGLLAKDEVEGREDLTVLLAKDKVE-CGEDLTVVTADVYI-EEVKRLGSIAG 65
+ DK M K L ++ R D+T+ + K+ E EDLT+V+A Y+ V +LG I G
Sbjct: 266 IEDKFSMAK--LVENSGPSRMDITISIGKENCERQAEDLTIVSAPYYVGNMVGKLG-ILG 322
Query: 66 P 66
P
Sbjct: 323 P 323
>sp|Q6LQ49|NORM_PHOPR Multidrug resistance protein NorM OS=Photobacterium profundum
GN=norM PE=3 SV=1
Length = 456
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 57 VKRLGSIAGPMVAVNLSQYSLQVISVMMVGHLGELFLSSTAIAISFSAV 105
V RL + P+ A + SL + +M+ LG + ++S +AI+FS++
Sbjct: 234 VLRLFKLGFPVAASMFFEVSLFAVIALMISPLGSIIVASHQVAINFSSL 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,173,473
Number of Sequences: 539616
Number of extensions: 1209951
Number of successful extensions: 3861
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3806
Number of HSP's gapped (non-prelim): 62
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)