Your job contains 1 sequence.
>040671
MELLRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELA
STNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIE
TRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLISE
KEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDRVK
DANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRENNNFSSCVPELAGSLQDPES
DSSEQQSSTNILMRISAKDVKDTCVVSAHHPDSECSMTQAETSKESRLNSNAAFQFHF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040671
(358 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1009023076 - symbol:AT1G10417 "AT1G10417" spec... 383 5.9e-42 2
RGD|708579 - symbol:Tax1bp1 "Tax1 (human T-cell leukemia ... 133 1.8e-05 1
UNIPROTKB|F1LS64 - symbol:Tax1bp1 "Tax1-binding protein 1... 133 1.8e-05 1
POMBASE|SPBC3D6.04c - symbol:mad1 "mitotic spindle checkp... 132 1.9e-05 1
CGD|CAL0001468 - symbol:SYS3 species:5476 "Candida albica... 132 2.7e-05 1
UNIPROTKB|Q59UF5 - symbol:SYS3 "Potential GRIP domain Gol... 132 2.7e-05 1
UNIPROTKB|Q3A9A0 - symbol:CHY_2490 "Conserved domain prot... 111 2.9e-05 1
TIGR_CMR|CHY_2490 - symbol:CHY_2490 "conserved domain pro... 111 2.9e-05 1
DICTYBASE|DDB_G0290503 - symbol:DDB_G0290503 species:4468... 132 4.9e-05 1
UNIPROTKB|F1SB10 - symbol:F1SB10 "Uncharacterized protein... 128 6.7e-05 1
TAIR|locus:2152985 - symbol:CIP1 "COP1-interactive protei... 131 6.7e-05 1
UNIPROTKB|F8W6D3 - symbol:NIN "Ninein" species:9606 "Homo... 130 6.8e-05 1
UNIPROTKB|G3MYU4 - symbol:CEP290 "Centrosomal protein of ... 126 7.6e-05 1
UNIPROTKB|F1NNI6 - symbol:LOC100858793 "Uncharacterized p... 132 0.00011 1
UNIPROTKB|E9PN67 - symbol:NIN "Ninein" species:9606 "Homo... 130 0.00011 1
ZFIN|ZDB-GENE-050208-275 - symbol:golga4 "golgin A4" spec... 130 0.00011 1
UNIPROTKB|C9J066 - symbol:NIN "Ninein" species:9606 "Homo... 130 0.00012 1
UNIPROTKB|Q8N4C6 - symbol:NIN "Ninein" species:9606 "Homo... 130 0.00012 1
UNIPROTKB|E1BS91 - symbol:CEP135 "Uncharacterized protein... 125 0.00021 1
UNIPROTKB|E1C7U7 - symbol:CEP135 "Uncharacterized protein... 125 0.00021 1
UNIPROTKB|F1PT61 - symbol:MYH16 "Uncharacterized protein"... 126 0.00030 1
ZFIN|ZDB-GENE-040910-6 - symbol:sycp1 "synaptonemal compl... 123 0.00030 1
UNIPROTKB|E2R2W8 - symbol:PDE4DIP "Uncharacterized protei... 125 0.00036 1
UNIPROTKB|E1BJ15 - symbol:CEP290 "Centrosomal protein of ... 126 0.00039 1
UNIPROTKB|F1NWT9 - symbol:LOC100858793 "Uncharacterized p... 124 0.00044 1
UNIPROTKB|Q9X0R4 - symbol:smc "Chromosome partition prote... 122 0.00046 1
UNIPROTKB|Q3V6T2 - symbol:CCDC88A "Girdin" species:9606 "... 124 0.00047 1
UNIPROTKB|F1NDQ5 - symbol:CCDC88A "Uncharacterized protei... 124 0.00048 1
UNIPROTKB|E7ESD9 - symbol:RAD50 "DNA repair protein RAD50... 118 0.00050 1
UNIPROTKB|E1C849 - symbol:CIT "Uncharacterized protein" s... 124 0.00053 1
RGD|1310664 - symbol:Tpr "translocated promoter region, n... 115 0.00054 1
RGD|621677 - symbol:Pmfbp1 "polyamine modulated factor 1 ... 120 0.00062 1
UNIPROTKB|E7EN38 - symbol:RAD50 "DNA repair protein RAD50... 118 0.00063 1
SGD|S000001662 - symbol:COY1 "Golgi membrane protein with... 118 0.00066 1
FB|FBgn0039152 - symbol:Rootletin "Rootletin" species:722... 123 0.00068 1
UNIPROTKB|F8VS29 - symbol:CEP290 "Centrosomal protein of ... 117 0.00070 1
UNIPROTKB|E1BMK9 - symbol:E1BMK9 "Uncharacterized protein... 121 0.00074 1
UNIPROTKB|E1C5U0 - symbol:E1C5U0 "Uncharacterized protein... 119 0.00080 1
UNIPROTKB|F1MU39 - symbol:F1MU39 "Uncharacterized protein... 122 0.00082 1
MGI|MGI:1289308 - symbol:Tax1bp1 "Tax1 (human T cell leuk... 118 0.00083 1
UNIPROTKB|Q4V328 - symbol:GRIPAP1 "GRIP1-associated prote... 118 0.00086 1
UNIPROTKB|F1PVV7 - symbol:MYH10 "Uncharacterized protein"... 122 0.00087 1
UNIPROTKB|F1N8D3 - symbol:Gga.11048 "Uncharacterized prot... 118 0.00087 1
UNIPROTKB|O97237 - symbol:PFC0235w "GRIP and coiled-coil ... 119 0.00096 1
UNIPROTKB|Q8NB25 - symbol:FAM184A "Protein FAM184A" speci... 119 0.00096 1
UNIPROTKB|A6QR15 - symbol:LOC535277 "Uncharacterized prot... 111 0.00098 1
UNIPROTKB|E1C6R7 - symbol:Gga.26929 "Uncharacterized prot... 118 0.0010 1
>TAIR|locus:1009023076 [details] [associations]
symbol:AT1G10417 "AT1G10417" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00530204 RefSeq:NP_001031019.4
UniGene:At.51554 ProteinModelPortal:F4I4C1 SMR:F4I4C1
EnsemblPlants:AT1G10417.1 GeneID:3766692 KEGG:ath:AT1G10417
Uniprot:F4I4C1
Length = 431
Score = 383 (139.9 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 77/121 (63%), Positives = 97/121 (80%)
Query: 38 VQKQKRNEEEYSRNLKELQSELASTNELCQKLERKVSYLQNDNALLENKQKELKETINRL 97
+ KQK+ EE+ R ++ELQ++LAS+ E + LERKVSYLQND +LLENKQ ELK TI L
Sbjct: 80 INKQKQTEEDCIRKVQELQADLASSRETQEALERKVSYLQNDYSLLENKQSELKTTIQNL 139
Query: 98 LQYRENFLSAYEESTCDMKRAIETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNV 157
LQ RE+FL+AY+ES C+MK +IE RDRK+ +LHEKI SHLTLFDSIEKEA IK+V+ V
Sbjct: 140 LQSRESFLNAYQESFCEMKCSIEARDRKILMLHEKITSHLTLFDSIEKEASVIKKVIHEV 199
Query: 158 E 158
+
Sbjct: 200 Q 200
Score = 200 (75.5 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 62/232 (26%), Positives = 113/232 (48%)
Query: 40 KQKRNEEEYSRNLKELQSELASTNELCQKLERKVSYLQNDNALLENKQK--ELKETINRL 97
+ K + E R + L ++ S L +E++ S ++ ++ Q + KE +
Sbjct: 156 EMKCSIEARDRKILMLHEKITSHLTLFDSIEKEASVIKK---VIHEVQGLVDKKEDVVTG 212
Query: 98 LQYRENFLSAYEESTCDMKRAIETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNV 157
L+ + + +S YE+ + RA+E KL ++ S + + + S K ++
Sbjct: 213 LKEKMDHVSTYEKVFIENIRALE---EKLKCHETELQSKDNIISELSAQLESEKSKNEHQ 269
Query: 158 ECVPYLQKTLSAKDVVIQNLISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTAL 217
V LQKTL KD+ ++NLISEKEAL+ E+ L +ILQRIQ++++ M +ED F + L
Sbjct: 270 HQVEELQKTLQVKDLAVENLISEKEALYSEMKGLEMILQRIQESVSLMTEEDRKVFTSIL 329
Query: 218 MLKENCNDIGTVNEDTRWLDRVKDANYNGGERSPSKASSLTAPENRASPLCQ 269
++ ++ + +D++++ Y + S P ASP CQ
Sbjct: 330 TFEQGSDERNKRSRHNDTVDKMEELLYVAPVMHSQENSVKVIPS--ASPRCQ 379
Score = 78 (32.5 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 1 MELLRLSKFKFQLQALIAETRHLK 24
ME+L+LSKFK QLQ++I E R L+
Sbjct: 1 MEMLKLSKFKLQLQSMIGEVRDLR 24
>RGD|708579 [details] [associations]
symbol:Tax1bp1 "Tax1 (human T-cell leukemia virus type I) binding
protein 1" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] InterPro:IPR015880 SMART:SM00355 RGD:708579
GO:GO:0006915 GO:GO:0043066 GO:GO:0008270 GO:GO:0005622
InterPro:IPR012852 Pfam:PF07888 GeneTree:ENSGT00530000063216
CTD:8887 eggNOG:NOG135564 HOGENOM:HOG000252947 HOVERGEN:HBG053034
OMA:MEGQNSQ EMBL:AY318959 EMBL:BC081949 IPI:IPI00382052
IPI:IPI00471831 RefSeq:NP_001004199.1 UniGene:Rn.3474
ProteinModelPortal:Q66HA4 STRING:Q66HA4 PRIDE:Q66HA4
Ensembl:ENSRNOT00000041988 GeneID:246244 KEGG:rno:246244
UCSC:RGD:708579 NextBio:623552 ArrayExpress:Q66HA4
Genevestigator:Q66HA4 Uniprot:Q66HA4
Length = 813
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 56/244 (22%), Positives = 110/244 (45%)
Query: 9 FKFQLQALIAETRHLKEKENS----ATEEIHLL---VQKQKRNEEEYSRNLKELQSELAS 61
F+F+ + + E ++++ NS T + LL ++K + +EE + + L+ E A
Sbjct: 118 FQFRAASPVEELLTMEDEGNSDMLVVTTKAGLLELKIEKTLKEKEELLKLVSVLEKETAQ 177
Query: 62 TNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIET 121
E ++ER++S+ ++ L+ +QK L E L E F+ Y ++T +A +
Sbjct: 178 LREQVGRMERELSHEKSRCEQLQAEQKGLLEVSQSLRVENEEFMKRYSDAT---SKAHQL 234
Query: 122 RDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKT------LSAKDVVIQ 175
+ ++V H+ + L DS++ + +Q + +EC +K + K+ I+
Sbjct: 235 EEDIVSVTHKAVEKETEL-DSLKDKLRKAQQEKEQLECQLKTEKDEKELYKVHLKNTEIE 293
Query: 176 N--LISEKEALHLEVGKLGIILQRIQDAIATMNQ--EDNNAFHTALMLK-ENCNDIGTVN 230
N L+SE + L G ++ ++ I + D H AL+L N D +
Sbjct: 294 NTKLVSEIQTLKNVDGNKESMITHFKEEIGKLQSCLADKENLHRALLLTTSNKEDTLLLK 353
Query: 231 EDTR 234
E R
Sbjct: 354 EQLR 357
>UNIPROTKB|F1LS64 [details] [associations]
symbol:Tax1bp1 "Tax1-binding protein 1 homolog"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR015880 SMART:SM00355 RGD:708579 GO:GO:0008270
GO:GO:0005622 InterPro:IPR012852 Pfam:PF07888
GeneTree:ENSGT00530000063216 IPI:IPI00471831
Ensembl:ENSRNOT00000011371 ArrayExpress:F1LS64 Uniprot:F1LS64
Length = 813
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 56/244 (22%), Positives = 110/244 (45%)
Query: 9 FKFQLQALIAETRHLKEKENS----ATEEIHLL---VQKQKRNEEEYSRNLKELQSELAS 61
F+F+ + + E ++++ NS T + LL ++K + +EE + + L+ E A
Sbjct: 118 FQFRAASPVEELLTMEDEGNSDMLVVTTKAGLLELKIEKTLKEKEELLKLVSVLEKETAQ 177
Query: 62 TNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIET 121
E ++ER++S+ ++ L+ +QK L E L E F+ Y ++T +A +
Sbjct: 178 LREQVGRMERELSHEKSRCEQLQAEQKGLLEVSQSLRVENEEFMKRYSDAT---SKAHQL 234
Query: 122 RDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKT------LSAKDVVIQ 175
+ ++V H+ + L DS++ + +Q + +EC +K + K+ I+
Sbjct: 235 EEDIVSVTHKAVEKETEL-DSLKDKLRKAQQEKEQLECQLKTEKDEKELYKVHLKNTEIE 293
Query: 176 N--LISEKEALHLEVGKLGIILQRIQDAIATMNQ--EDNNAFHTALMLK-ENCNDIGTVN 230
N L+SE + L G ++ ++ I + D H AL+L N D +
Sbjct: 294 NTKLVSEIQTLKNVDGNKESMITHFKEEIGKLQSCLADKENLHRALLLTTSNKEDTLLLK 353
Query: 231 EDTR 234
E R
Sbjct: 354 EQLR 357
>POMBASE|SPBC3D6.04c [details] [associations]
symbol:mad1 "mitotic spindle checkpoint protein Mad1"
species:4896 "Schizosaccharomyces pombe" [GO:0000778 "condensed
nuclear chromosome kinetochore" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=IEA]
InterPro:IPR008672 Pfam:PF05557 PomBase:SPBC3D6.04c GO:GO:0051301
GO:GO:0007067 GO:GO:0007094 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0000778 EMBL:AF204761 PIR:T40364 RefSeq:NP_595516.1
ProteinModelPortal:P87169 STRING:P87169 EnsemblFungi:SPBC3D6.04c.1
GeneID:2540320 KEGG:spo:SPBC3D6.04c eggNOG:NOG275166 KO:K06679
OMA:FERQEND OrthoDB:EOG43V344 NextBio:20801449 PANTHER:PTHR23168
Uniprot:P87169
Length = 689
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 74/273 (27%), Positives = 128/273 (46%)
Query: 8 KFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSR-NLKELQSELASTNELC 66
K QL+ + E + L+E+ S +EI ++ RNE+E ++ + EL A E+
Sbjct: 96 KNSLQLRLTLVE-KQLEEQSTSYQKEI-----EEVRNEKEATQVKIHELLD--AKWKEIA 147
Query: 67 QKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRDRKL 126
E K +ND AL E K E+ + N+ LQ ++ L+ E+ D + +ET+ ++L
Sbjct: 148 ---ELKTQIEKNDQALSE-KNHEVMVS-NQALQMKDTNLTNLEKLFADSREQLETKCKEL 202
Query: 127 TVLHEKINS----HLTLFDSIEKEAFSIKQVVDNVEC---VPYLQKTLSAKDVVIQNLIS 179
+++ + L +SI++ + SI+ N E + L+K +A++ I+ L S
Sbjct: 203 AAAEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSS 262
Query: 180 EK---EALHLEVGKLGIILQRIQ---DAIATMNQEDNNAFHTALMLKENC--NDIGTVNE 231
E L E L L R + D +AT+ E N T L ++ N++ T
Sbjct: 263 NNRNVEILKEEKNDLESKLYRFEEYRDKVATLELE-NEKIQTELNSWKSLITNELPTPEA 321
Query: 232 DTRWLDRVKDANYNGGERSPSKASSLT-APENR 263
+ L +++ N N GER S S L+ P N+
Sbjct: 322 VSNKLVFLQNTNANLGERVSSLESQLSNKPANQ 354
>CGD|CAL0001468 [details] [associations]
symbol:SYS3 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0043001
"Golgi to plasma membrane protein transport" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 CGD:CAL0001468
eggNOG:NOG12793 EMBL:AACQ01000131 GO:GO:0000042 Gene3D:1.10.220.60
RefSeq:XP_713243.1 GeneID:3645119 KEGG:cal:CaO19.2410
Uniprot:Q59UF5
Length = 895
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 58/263 (22%), Positives = 129/263 (49%)
Query: 5 RLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNE 64
+++ ++ + + + E + LKE+ + AT+E +++K++E++ + ++ L+ +L ST
Sbjct: 417 QINDWELKYNSQLKENKELKEELDVATKESKEKEKERKKSEDQLRKQIQTLKQKLESTEN 476
Query: 65 LCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRDR 124
K E K L+N L E K+K L++ I+ L +++ N S E + +K ++ +D
Sbjct: 477 ---KFESKTKDLKN---LSEEKEK-LEKRISELSKFKSNDSSLKLEIS-SLKSSLTNKDN 528
Query: 125 KLTVLHEKIN----SHLTLFDSIEKEAFSIKQVVDN-VECVPYLQKTLSAKDVVIQNLIS 179
+ L +++ S+ +L +E+ + S ++ N ++ + + L+ ++V+++N
Sbjct: 529 SINELKTQVDELKQSNKSLNSKVEELSKSNNELQSNSMDFLKDKNELLTKQEVLMENT-- 586
Query: 180 EKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDRV 239
++L+ +V KL Q QD I + + N ++ ND+ + + L +
Sbjct: 587 --KSLNSQVTKLQ---QEKQDVITELEKTKNKLDIVIADKSQSANDMLSYKKQHEEL-MM 640
Query: 240 KDANYNGGERSPSKASSLTAPEN 262
K Y+ R S LT N
Sbjct: 641 KSKEYS--LRIESLEDDLTEARN 661
>UNIPROTKB|Q59UF5 [details] [associations]
symbol:SYS3 "Potential GRIP domain Golgi protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000237 Pfam:PF01465
PROSITE:PS50913 CGD:CAL0001468 eggNOG:NOG12793 EMBL:AACQ01000131
GO:GO:0000042 Gene3D:1.10.220.60 RefSeq:XP_713243.1 GeneID:3645119
KEGG:cal:CaO19.2410 Uniprot:Q59UF5
Length = 895
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 58/263 (22%), Positives = 129/263 (49%)
Query: 5 RLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNE 64
+++ ++ + + + E + LKE+ + AT+E +++K++E++ + ++ L+ +L ST
Sbjct: 417 QINDWELKYNSQLKENKELKEELDVATKESKEKEKERKKSEDQLRKQIQTLKQKLESTEN 476
Query: 65 LCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRDR 124
K E K L+N L E K+K L++ I+ L +++ N S E + +K ++ +D
Sbjct: 477 ---KFESKTKDLKN---LSEEKEK-LEKRISELSKFKSNDSSLKLEIS-SLKSSLTNKDN 528
Query: 125 KLTVLHEKIN----SHLTLFDSIEKEAFSIKQVVDN-VECVPYLQKTLSAKDVVIQNLIS 179
+ L +++ S+ +L +E+ + S ++ N ++ + + L+ ++V+++N
Sbjct: 529 SINELKTQVDELKQSNKSLNSKVEELSKSNNELQSNSMDFLKDKNELLTKQEVLMENT-- 586
Query: 180 EKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDRV 239
++L+ +V KL Q QD I + + N ++ ND+ + + L +
Sbjct: 587 --KSLNSQVTKLQ---QEKQDVITELEKTKNKLDIVIADKSQSANDMLSYKKQHEEL-MM 640
Query: 240 KDANYNGGERSPSKASSLTAPEN 262
K Y+ R S LT N
Sbjct: 641 KSKEYS--LRIESLEDDLTEARN 661
>UNIPROTKB|Q3A9A0 [details] [associations]
symbol:CHY_2490 "Conserved domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000141 GenomeReviews:CP000141_GR InterPro:IPR009053
SUPFAM:SSF46579 InterPro:IPR010776 Pfam:PF07106 InterPro:IPR013253
Pfam:PF08317 RefSeq:YP_361284.1 ProteinModelPortal:Q3A9A0
GeneID:3727177 KEGG:chy:CHY_2490 PATRIC:21278043 eggNOG:NOG269813
HOGENOM:HOG000131175 OMA:RSDINEM ProtClustDB:CLSK742696
BioCyc:CHYD246194:GJCN-2489-MONOMER Uniprot:Q3A9A0
Length = 155
Score = 111 (44.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/142 (24%), Positives = 69/142 (48%)
Query: 5 RLSKFKFQLQ---ALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSEL-- 59
RL + K Q+ +++AE H+ + N A EE+ + + ++ E + EL++E+
Sbjct: 5 RLDEIKIQINQMSSMLAELIHMVGRTNGAVEELRSDINEMRKEINELRAEVNELRAEVNG 64
Query: 60 --ASTNEL---CQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCD 114
A TNEL +L+ +V+ L+ + L + E+K I + E+ ++A E+ +
Sbjct: 65 LKAETNELRAEMSELKAEVNGLRTEMNELRTEMNEMKNKITTM----EDKIAAMEKDIAE 120
Query: 115 MKRAIETRDRKLTVLHEKINSH 136
+K + KL K+ +H
Sbjct: 121 IKATLREHTEKLDFAMFKLINH 142
>TIGR_CMR|CHY_2490 [details] [associations]
symbol:CHY_2490 "conserved domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000141 GenomeReviews:CP000141_GR InterPro:IPR009053
SUPFAM:SSF46579 InterPro:IPR010776 Pfam:PF07106 InterPro:IPR013253
Pfam:PF08317 RefSeq:YP_361284.1 ProteinModelPortal:Q3A9A0
GeneID:3727177 KEGG:chy:CHY_2490 PATRIC:21278043 eggNOG:NOG269813
HOGENOM:HOG000131175 OMA:RSDINEM ProtClustDB:CLSK742696
BioCyc:CHYD246194:GJCN-2489-MONOMER Uniprot:Q3A9A0
Length = 155
Score = 111 (44.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/142 (24%), Positives = 69/142 (48%)
Query: 5 RLSKFKFQLQ---ALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSEL-- 59
RL + K Q+ +++AE H+ + N A EE+ + + ++ E + EL++E+
Sbjct: 5 RLDEIKIQINQMSSMLAELIHMVGRTNGAVEELRSDINEMRKEINELRAEVNELRAEVNG 64
Query: 60 --ASTNEL---CQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCD 114
A TNEL +L+ +V+ L+ + L + E+K I + E+ ++A E+ +
Sbjct: 65 LKAETNELRAEMSELKAEVNGLRTEMNELRTEMNEMKNKITTM----EDKIAAMEKDIAE 120
Query: 115 MKRAIETRDRKLTVLHEKINSH 136
+K + KL K+ +H
Sbjct: 121 IKATLREHTEKLDFAMFKLINH 142
>DICTYBASE|DDB_G0290503 [details] [associations]
symbol:DDB_G0290503 species:44689 "Dictyostelium
discoideum" [GO:0005543 "phospholipid binding" evidence=IEA]
InterPro:IPR001849 PROSITE:PS50003 SMART:SM00233
dictyBase:DDB_G0290503 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 eggNOG:NOG12793 EMBL:AAFI02000164
RefSeq:XP_635612.1 HSSP:P11978 ProteinModelPortal:Q54G05
PRIDE:Q54G05 EnsemblProtists:DDB0188916 GeneID:8627684
KEGG:ddi:DDB_G0290503 OMA:FNSKKQQ Uniprot:Q54G05
Length = 1492
Score = 132 (51.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 53/221 (23%), Positives = 100/221 (45%)
Query: 18 AETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNELCQKLERKVSYLQ 77
+ + L+ K N EI+LL++ + + +E L E E+ NEL KL K + +
Sbjct: 854 SSSNELQSKLNEKQNEINLLIENNQSSSDELQSKLNEKHQEI---NELQSKLNEKQNKI- 909
Query: 78 NDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRDRKLTVLHEKINSHL 137
N L+EN + E ++L+Q + L E + +I RD KL L K+N
Sbjct: 910 --NELVENNESSSDELQSKLIQLSDQ-LQEKENQLKSFESSIIERDEKLNQLQSKLNEKQ 966
Query: 138 TLFDSI-EKEAFSIKQVVDNV-----ECVPYLQKTLSAKDVVIQNLISEK-EALHLEVGK 190
D I E S+ ++ N+ E ++ S+ D +Q+ ++EK ++ + K
Sbjct: 967 NEIDQITENNQSSLDELQSNLNEKQNEINQLIENNQSSLDE-LQSKLNEKLNEINEKDNK 1025
Query: 191 LGIILQRIQDAIATMNQEDNNAFHTALM-LKENCNDIGTVN 230
+ ++Q + +++++ + F L+E N I +N
Sbjct: 1026 INELIQTNE----SLSKDQQSKFENLEQELEEKNNKILDLN 1062
>UNIPROTKB|F1SB10 [details] [associations]
symbol:F1SB10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR012943 Pfam:PF07989
GeneTree:ENSGT00530000063845 EMBL:CU468525 EMBL:FP565730
Ensembl:ENSSSCT00000007347 OMA:CNEEMES ArrayExpress:F1SB10
Uniprot:F1SB10
Length = 830
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 51/211 (24%), Positives = 96/211 (45%)
Query: 1 MELLRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELA 60
+E+ +L + Q + + + + +A EE + ++ +E + L++LQ EL
Sbjct: 416 LEIQKLQRVVRQKERQLTDAKRCVRFVEAAAEEREQQKEASWKHNQELRKALQQLQGELQ 475
Query: 61 STN--------ELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENF---LSAYE 109
+ + E C + + ++Q+ N L +K++ L+E LLQYR+N L A E
Sbjct: 476 NKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKEQLLQE-FRELLQYRDNSDKTLDANE 534
Query: 110 ESTCDMKRAIETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVV-DNVECVPYLQKTLS 168
+++ I+ RD L I+ + + EKE + V + + L+ LS
Sbjct: 535 MLLEKLRQRIQDRD---VALERAIDEKFSSLEEKEKELRQLHLAVRERDHDLERLRGVLS 591
Query: 169 AKDVVIQNLISEKEALHLEVGKLGIILQRIQ 199
+ + IQ++ S A LEV +L Q +Q
Sbjct: 592 SNEATIQSMESLLRAKGLEVEQLSATCQNLQ 622
>TAIR|locus:2152985 [details] [associations]
symbol:CIP1 "COP1-interactive protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005856
"cytoskeleton" evidence=IDA] [GO:0042306 "regulation of protein
import into nucleus" evidence=TAS] GO:GO:0005774 EMBL:CP002688
GO:GO:0009507 GO:GO:0005856 GO:GO:0042306 IPI:IPI00524345
RefSeq:NP_198994.2 UniGene:At.30208 PRIDE:F4JZY1
EnsemblPlants:AT5G41790.1 GeneID:834184 KEGG:ath:AT5G41790
OMA:KTHERES ArrayExpress:F4JZY1 Uniprot:F4JZY1
Length = 1586
Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 47/191 (24%), Positives = 86/191 (45%)
Query: 13 LQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNELCQKLERK 72
+Q LI+E +KEK E LV+ K +E E S +KEL++ + S+ +L +
Sbjct: 310 IQELISELGEMKEKYKEKESEHSSLVELHKTHERESSSQVKELEAHIESSEKLVADFTQS 369
Query: 73 VSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRD----RKLTV 128
++ + + LL K EL I + +S E +++ R+ R +
Sbjct: 370 LNNAEEEKKLLSQKIAELSNEIQEAQNTMQELMS--ESGQLKESHSVKERELFSLRDIHE 427
Query: 129 LHEKINSHLTLFDSIEKEAFSIKQVVDNV----ECVPYLQKTLSAKDVVIQNLISEKE-- 182
+H++ +S T +E + S KQ V ++ + K +S+K+V N + + +
Sbjct: 428 IHQRDSS--TRASELEAQLESSKQQVSDLSASLKAAEEENKAISSKNVETMNKLEQTQNT 485
Query: 183 --ALHLEVGKL 191
L E+GKL
Sbjct: 486 IQELMAELGKL 496
>UNIPROTKB|F8W6D3 [details] [associations]
symbol:NIN "Ninein" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR002048
InterPro:IPR011992 PROSITE:PS50222 GO:GO:0005509 Gene3D:1.10.238.10
EMBL:AL606834 EMBL:AL133485 IPI:IPI00883941 HGNC:HGNC:14906
ChiTaRS:NIN ProteinModelPortal:F8W6D3 SMR:F8W6D3
Ensembl:ENST00000389868 ArrayExpress:F8W6D3 Bgee:F8W6D3
Uniprot:F8W6D3
Length = 1276
Score = 130 (50.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 76/298 (25%), Positives = 128/298 (42%)
Query: 4 LRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTN 63
L+L + + +T +K+ EN+A ++ +V+ K+ E +K Q +L +T
Sbjct: 829 LKLGTLNGSQEEMWQKTETVKQ-ENAAVQK---MVENLKKQISELK--IKNQQLDLENT- 881
Query: 64 ELCQKLERKVSYLQNDNALLENK--QKELKETINRLLQYREN--FLSAYEESTCDMKRAI 119
EL QK + LQ N L QKE KE N L+ RE F E C ++ +
Sbjct: 882 ELSQKNSQNQEKLQELNQRLTEMLCQKE-KEPGNSALEEREQEKFNLKEELERCKVQSST 940
Query: 120 ETRDRKLTVLHEKINSHLTLFDS--IEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNL 177
+ + KI +H+ ++ ++ E +KQ+ + + QK S + L
Sbjct: 941 LVSSLEAELSEVKIQTHIVQQENHLLKDELEKMKQLHRCPDLSDFQQKISSVLSYN-EKL 999
Query: 178 ISEKEALHLEVGKLGIILQR---IQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTR 234
+ EKEAL E+ L + ++ IATM QE + H + LK + + +
Sbjct: 1000 LKEKEALSEELNSCVDKLAKSSLLEHRIATMKQEQKSWEHQSASLKSQL--VASQEKVQN 1057
Query: 235 WLDRVKDANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRENNNFSSCVPELA 292
D V++ N + S K S L + L Q+ ++L Q +N S PE+A
Sbjct: 1058 LEDTVQNVNL---QMSRMK-SDLRVTQQEKEALKQEVMSLHKQL-QNAGGKSWAPEIA 1110
>UNIPROTKB|G3MYU4 [details] [associations]
symbol:CEP290 "Centrosomal protein of 290 kDa" species:9913
"Bos taurus" [GO:0060271 "cilium morphogenesis" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR026201 GO:GO:0005634 GO:GO:0005813
GeneTree:ENSGT00700000104127 GO:GO:0060271 PANTHER:PTHR18879
EMBL:DAAA02012650 EMBL:DAAA02012651 Ensembl:ENSBTAT00000063396
Uniprot:G3MYU4
Length = 618
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 58/243 (23%), Positives = 109/243 (44%)
Query: 5 RLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSR-NLKELQSELASTN 63
R S+ K + + T+ + EK E++ +Q+ K R + ++QS++
Sbjct: 353 RDSQIKMLTEQVEQYTKEM-EKNTFIIEDLKNELQRNKGASTLTQRTHYMKIQSKVQILE 411
Query: 64 ELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRA---IE 120
E ++ ER + D K KEL ET+ RL Y E+ + E++ ++K I+
Sbjct: 412 ERTKEAERTAELAEAD---AREKDKELVETLKRLKDY-ESGVYGLEDAVIEIKNCKNQIK 467
Query: 121 TRDRKLTVLHEKINS-HLTLFDSI-EKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLI 178
RDR++ VL ++IN L + D + E EA + ++ + L + + K + Q
Sbjct: 468 IRDREIEVLTKEINKLELKINDFLDENEALRERMGLEPTTMID-LTEFRNTKSLKQQQYR 526
Query: 179 SEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDR 238
+E + L E+ L ++ I M QE T+ ++ E+ N +++ R +R
Sbjct: 527 AENQILLKEIESLEEERLDLKKKIRQMAQEKGKRTVTSGLIAEDLNLTEHFSQENRMGER 586
Query: 239 VKD 241
D
Sbjct: 587 KSD 589
>UNIPROTKB|F1NNI6 [details] [associations]
symbol:LOC100858793 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR026202 GO:GO:0005794 GeneTree:ENSGT00700000104188
PANTHER:PTHR18887 EMBL:AADN02073643 EMBL:AADN02073644
EMBL:AADN02073645 EMBL:AADN02073646 EMBL:AADN02073647
EMBL:AADN02073648 EMBL:AADN02073649 EMBL:AADN02073650
EMBL:AADN02073651 IPI:IPI00852417 Ensembl:ENSGALT00000012655
ArrayExpress:F1NNI6 Uniprot:F1NNI6
Length = 3103
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 42/183 (22%), Positives = 91/183 (49%)
Query: 12 QLQALIAETRHLK-EKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNELCQKLE 70
++Q+L E H + + + +I L K + EE + ++L + L +++
Sbjct: 762 KIQSLQKELDHFQLQLTDEKNRQIQFLQDKINKLEEIVRTSQEKLHVDGKKVASLLEEMG 821
Query: 71 RKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEES-TCDMKRAIETRDRKLTVL 129
RK +++ + L N+QK+L +++ ++ ++ F++ ES + +M E R+ + L
Sbjct: 822 RKDQLIEDLTSQL-NQQKDLISGLSQQMKEKDCFVTQIMESLSSEMLNFSEERNTLSSKL 880
Query: 130 HEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLISEKEALHLEVG 189
H+ ++H + + ++ +EC Q LS ++ V ++L+ EKE +HL +
Sbjct: 881 HDLESAHNHSVGELNRVLQELEDCKKELECS---QVVLSNREAVFKDLMKEKEEMHLNLE 937
Query: 190 KLG 192
KLG
Sbjct: 938 KLG 940
>UNIPROTKB|E9PN67 [details] [associations]
symbol:NIN "Ninein" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR002048
InterPro:IPR011992 PROSITE:PS50222 GO:GO:0005509 Gene3D:1.10.238.10
EMBL:AL606834 EMBL:AL133485 HGNC:HGNC:14906 ChiTaRS:NIN
IPI:IPI00984029 Ensembl:ENST00000324330 Ensembl:ENST00000476352
Uniprot:E9PN67
Length = 1989
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 76/298 (25%), Positives = 128/298 (42%)
Query: 4 LRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTN 63
L+L + + +T +K+ EN+A ++ +V+ K+ E +K Q +L +T
Sbjct: 1542 LKLGTLNGSQEEMWQKTETVKQ-ENAAVQK---MVENLKKQISELK--IKNQQLDLENT- 1594
Query: 64 ELCQKLERKVSYLQNDNALLENK--QKELKETINRLLQYREN--FLSAYEESTCDMKRAI 119
EL QK + LQ N L QKE KE N L+ RE F E C ++ +
Sbjct: 1595 ELSQKNSQNQEKLQELNQRLTEMLCQKE-KEPGNSALEEREQEKFNLKEELERCKVQSST 1653
Query: 120 ETRDRKLTVLHEKINSHLTLFDS--IEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNL 177
+ + KI +H+ ++ ++ E +KQ+ + + QK S + L
Sbjct: 1654 LVSSLEAELSEVKIQTHIVQQENHLLKDELEKMKQLHRCPDLSDFQQKISSVLSYN-EKL 1712
Query: 178 ISEKEALHLEVGKLGIILQR---IQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTR 234
+ EKEAL E+ L + ++ IATM QE + H + LK + + +
Sbjct: 1713 LKEKEALSEELNSCVDKLAKSSLLEHRIATMKQEQKSWEHQSASLKSQL--VASQEKVQN 1770
Query: 235 WLDRVKDANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRENNNFSSCVPELA 292
D V++ N + S K S L + L Q+ ++L Q +N S PE+A
Sbjct: 1771 LEDTVQNVNL---QMSRMK-SDLRVTQQEKEALKQEVMSLHKQL-QNAGGKSWAPEIA 1823
>ZFIN|ZDB-GENE-050208-275 [details] [associations]
symbol:golga4 "golgin A4" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] ZFIN:ZDB-GENE-050208-275 GeneTree:ENSGT00700000104373
EMBL:CU986283 IPI:IPI00899353 Ensembl:ENSDART00000109469
Bgee:E7FEK9 Uniprot:E7FEK9
Length = 2037
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 70/297 (23%), Positives = 125/297 (42%)
Query: 13 LQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNELCQKLERK 72
L+ + + L E ++ EE+ L Q K EE + L EL + + LE
Sbjct: 769 LEEHVLREKSLLEDGSAQLEELWLRAQLNKEALEESRSQVSTLTDELQQARDQVKNLEET 828
Query: 73 VSYLQND----NALLENKQKELKETINRLLQYRENFLSAYEE---STCDMKRAIETRDRK 125
+ ++ND LE K EL+E + ++ +++ LS E +TC + + R RK
Sbjct: 829 LEAVRNDCKEKEVCLEEKTNELQELVQKIEHIKKD-LSEKENLHAATCKTLQEEQNRLRK 887
Query: 126 LTVLHEKINSHLTLFDSIEKEA-FSIKQVVDNVECVPYLQKTLSAKDVVIQNLISEKEAL 184
L ++ +S ++I K+ +K + +E + QK A+D + + L ++E+
Sbjct: 888 Q--LDDQKSSQEKKLENIRKDMDCKLKSQENKLE--KFKQKAKEAQDKMKKKLQDQEESA 943
Query: 185 HLEVGK----LGIILQRIQDAIATMNQEDNNAFHTALM-LKENCN---DIGTVNEDTRWL 236
+E+ K L + Q++++ I M Q + TA+ L+ N D VN
Sbjct: 944 KVELSKKIQELELKDQQLKEKILEMAQTSSEGLSTAMSDLEANHKEHLDKLQVNHKQELE 1003
Query: 237 DRVK--DANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRENNNFSSCVPEL 291
D V+ N E + S T +++A L + L S EN + L
Sbjct: 1004 DLVRHWQEKLNQNEEEMQEKHSQTL-QDKAQELEEISRLLSSSKEENEQIIKDIQNL 1059
>UNIPROTKB|C9J066 [details] [associations]
symbol:NIN "Ninein" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR002048
InterPro:IPR011992 PROSITE:PS50222 GO:GO:0005509 Gene3D:1.10.238.10
EMBL:AL606834 EMBL:AL133485 IPI:IPI00921003 HGNC:HGNC:14906
HOGENOM:HOG000293170 ChiTaRS:NIN ProteinModelPortal:C9J066
STRING:C9J066 PRIDE:C9J066 Ensembl:ENST00000453196 UCSC:uc001wyo.3
ArrayExpress:C9J066 Bgee:C9J066 Uniprot:C9J066
Length = 2046
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 76/298 (25%), Positives = 128/298 (42%)
Query: 4 LRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTN 63
L+L + + +T +K+ EN+A ++ +V+ K+ E +K Q +L +T
Sbjct: 1542 LKLGTLNGSQEEMWQKTETVKQ-ENAAVQK---MVENLKKQISELK--IKNQQLDLENT- 1594
Query: 64 ELCQKLERKVSYLQNDNALLENK--QKELKETINRLLQYREN--FLSAYEESTCDMKRAI 119
EL QK + LQ N L QKE KE N L+ RE F E C ++ +
Sbjct: 1595 ELSQKNSQNQEKLQELNQRLTEMLCQKE-KEPGNSALEEREQEKFNLKEELERCKVQSST 1653
Query: 120 ETRDRKLTVLHEKINSHLTLFDS--IEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNL 177
+ + KI +H+ ++ ++ E +KQ+ + + QK S + L
Sbjct: 1654 LVSSLEAELSEVKIQTHIVQQENHLLKDELEKMKQLHRCPDLSDFQQKISSVLSYN-EKL 1712
Query: 178 ISEKEALHLEVGKLGIILQR---IQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTR 234
+ EKEAL E+ L + ++ IATM QE + H + LK + + +
Sbjct: 1713 LKEKEALSEELNSCVDKLAKSSLLEHRIATMKQEQKSWEHQSASLKSQL--VASQEKVQN 1770
Query: 235 WLDRVKDANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRENNNFSSCVPELA 292
D V++ N + S K S L + L Q+ ++L Q +N S PE+A
Sbjct: 1771 LEDTVQNVNL---QMSRMK-SDLRVTQQEKEALKQEVMSLHKQL-QNAGGKSWAPEIA 1823
>UNIPROTKB|Q8N4C6 [details] [associations]
symbol:NIN "Ninein" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] [GO:0034454 "microtubule anchoring at
centrosome" evidence=IEA] [GO:0090222 "centrosome-templated
microtubule nucleation" evidence=IEA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051642 "centrosome localization" evidence=TAS]
InterPro:IPR002048 InterPro:IPR011992 PROSITE:PS50222 GO:GO:0005525
GO:GO:0005813 GO:GO:0005814 GO:GO:0005509 Gene3D:1.10.238.10
GO:GO:0051642 GO:GO:0005874 EMBL:AL606834 GO:GO:0034454
eggNOG:NOG124644 EMBL:AF212162 EMBL:AF302773 EMBL:AF223937
EMBL:AF223938 EMBL:AF223939 EMBL:AB046785 EMBL:AL133485
EMBL:BC034708 EMBL:BC065521 EMBL:BC090932 EMBL:AY027794
EMBL:AY027795 EMBL:AY027796 EMBL:AF186776 EMBL:AK027054
IPI:IPI00171791 IPI:IPI00329695 IPI:IPI00441952 IPI:IPI00441955
IPI:IPI00441959 IPI:IPI00883941 IPI:IPI00921003 IPI:IPI00971005
RefSeq:NP_057434.4 RefSeq:NP_065972.3 RefSeq:NP_891989.2
RefSeq:NP_891991.1 UniGene:Hs.310429 UniGene:Hs.569387
ProteinModelPortal:Q8N4C6 IntAct:Q8N4C6 MINT:MINT-1175275
STRING:Q8N4C6 PhosphoSite:Q8N4C6 DMDM:311033487 PaxDb:Q8N4C6
PRIDE:Q8N4C6 Ensembl:ENST00000245441 Ensembl:ENST00000382041
Ensembl:ENST00000382043 GeneID:51199 KEGG:hsa:51199 UCSC:uc001wyi.3
UCSC:uc001wym.2 CTD:51199 GeneCards:GC14M051187 HGNC:HGNC:14906
HPA:HPA005939 MIM:608684 MIM:614851 neXtProt:NX_Q8N4C6
PharmGKB:PA31630 HOGENOM:HOG000293170 HOVERGEN:HBG052623 KO:K16476
OMA:AMMHDLQ OrthoDB:EOG45QHC9 BindingDB:Q8N4C6 ChiTaRS:NIN
GenomeRNAi:51199 NextBio:54220 ArrayExpress:Q8N4C6 Bgee:Q8N4C6
Genevestigator:Q8N4C6 GermOnline:ENSG00000100503 GO:GO:0090222
Uniprot:Q8N4C6
Length = 2090
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 76/298 (25%), Positives = 128/298 (42%)
Query: 4 LRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTN 63
L+L + + +T +K+ EN+A ++ +V+ K+ E +K Q +L +T
Sbjct: 1542 LKLGTLNGSQEEMWQKTETVKQ-ENAAVQK---MVENLKKQISELK--IKNQQLDLENT- 1594
Query: 64 ELCQKLERKVSYLQNDNALLENK--QKELKETINRLLQYREN--FLSAYEESTCDMKRAI 119
EL QK + LQ N L QKE KE N L+ RE F E C ++ +
Sbjct: 1595 ELSQKNSQNQEKLQELNQRLTEMLCQKE-KEPGNSALEEREQEKFNLKEELERCKVQSST 1653
Query: 120 ETRDRKLTVLHEKINSHLTLFDS--IEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNL 177
+ + KI +H+ ++ ++ E +KQ+ + + QK S + L
Sbjct: 1654 LVSSLEAELSEVKIQTHIVQQENHLLKDELEKMKQLHRCPDLSDFQQKISSVLSYN-EKL 1712
Query: 178 ISEKEALHLEVGKLGIILQR---IQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTR 234
+ EKEAL E+ L + ++ IATM QE + H + LK + + +
Sbjct: 1713 LKEKEALSEELNSCVDKLAKSSLLEHRIATMKQEQKSWEHQSASLKSQL--VASQEKVQN 1770
Query: 235 WLDRVKDANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRENNNFSSCVPELA 292
D V++ N + S K S L + L Q+ ++L Q +N S PE+A
Sbjct: 1771 LEDTVQNVNL---QMSRMK-SDLRVTQQEKEALKQEVMSLHKQL-QNAGGKSWAPEIA 1823
>UNIPROTKB|E1BS91 [details] [associations]
symbol:CEP135 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007099 "centriole replication" evidence=IEA]
[GO:0010457 "centriole-centriole cohesion" evidence=IEA]
InterPro:IPR026732 GO:GO:0007099 GO:GO:0010457
PANTHER:PTHR23159:SF3 GeneTree:ENSGT00530000063949
EMBL:AADN02031316 EMBL:AADN02031317 IPI:IPI00818400
Ensembl:ENSGALT00000022372 Uniprot:E1BS91
Length = 1147
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 59/230 (25%), Positives = 111/230 (48%)
Query: 6 LSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNEL 65
+ +F+ + L + LKE+ S E+ L K + ++ S +L++EL S + L
Sbjct: 618 IQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSS----QLKAELCSLHLL 673
Query: 66 CQKLERKVSYLQNDNALLENKQKELKETINRLLQY--RENFLSAYEESTCDMKRAIET-- 121
++L+R V LQ+ +L +++ + +E I +L + R N S ++ ++ R+ T
Sbjct: 674 NEQLQRTVEDLQHRLSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTITVL 733
Query: 122 ---RDRKLTVLHEKINSHLTLFDSI---EKEAFSIKQVVDNVEC-VPYLQKTLSAKDVVI 174
+D + EK L D++ EK ++ + +E L+ LS++D I
Sbjct: 734 DKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREI 793
Query: 175 QNLISEKEALHLEVGKLG----IILQ---RIQDAIATMNQEDNNAFHTAL 217
+L + +A H E+ + G I L+ R+QD +ATM +E N A + L
Sbjct: 794 SSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRE-NQAVSSEL 842
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 56/235 (23%), Positives = 108/235 (45%)
Query: 2 ELLRLSKFKFQLQALIAETRH---LKEKE-NSATEEIHLLVQKQKR-NEEEYSRN--LKE 54
EL L QLQ + + +H LK+ E SA EEI L +K R N++ S++ +
Sbjct: 666 ELCSLHLLNEQLQRTVEDLQHRLSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNV 725
Query: 55 LQSELASTNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCD 114
L+S + ++ L+ V A L++ ++TI L LS E ST
Sbjct: 726 LRSTITVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHL----RLTLSELESSTDQ 781
Query: 115 MKRAIETRDRKLTVLHEKIN-SHLTLFDSIEKEAFSIKQ---VVDNVECVPYLQKTLSAK 170
+K + +RDR+++ L +++ SH + ++ + ++K+ + D++ + + +S++
Sbjct: 782 LKDLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSE 841
Query: 171 DVVIQNLISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCND 225
+++ I EKE + V + R + IA+ +E+ ML D
Sbjct: 842 ---LEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQAED 893
>UNIPROTKB|E1C7U7 [details] [associations]
symbol:CEP135 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0007099
"centriole replication" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0010457 "centriole-centriole
cohesion" evidence=IEA] InterPro:IPR026732 GO:GO:0005814
GO:GO:0007099 OMA:DKEFHSH GO:GO:0010457 PANTHER:PTHR23159:SF3
GeneTree:ENSGT00530000063949 EMBL:AADN02031316 EMBL:AADN02031317
IPI:IPI00571215 Ensembl:ENSGALT00000037552 Uniprot:E1C7U7
Length = 1155
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 59/230 (25%), Positives = 111/230 (48%)
Query: 6 LSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNEL 65
+ +F+ + L + LKE+ S E+ L K + ++ S +L++EL S + L
Sbjct: 621 IQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSS----QLKAELCSLHLL 676
Query: 66 CQKLERKVSYLQNDNALLENKQKELKETINRLLQY--RENFLSAYEESTCDMKRAIET-- 121
++L+R V LQ+ +L +++ + +E I +L + R N S ++ ++ R+ T
Sbjct: 677 NEQLQRTVEDLQHRLSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTITVL 736
Query: 122 ---RDRKLTVLHEKINSHLTLFDSI---EKEAFSIKQVVDNVEC-VPYLQKTLSAKDVVI 174
+D + EK L D++ EK ++ + +E L+ LS++D I
Sbjct: 737 DKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREI 796
Query: 175 QNLISEKEALHLEVGKLG----IILQ---RIQDAIATMNQEDNNAFHTAL 217
+L + +A H E+ + G I L+ R+QD +ATM +E N A + L
Sbjct: 797 SSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRE-NQAVSSEL 845
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 56/235 (23%), Positives = 108/235 (45%)
Query: 2 ELLRLSKFKFQLQALIAETRH---LKEKE-NSATEEIHLLVQKQKR-NEEEYSRN--LKE 54
EL L QLQ + + +H LK+ E SA EEI L +K R N++ S++ +
Sbjct: 669 ELCSLHLLNEQLQRTVEDLQHRLSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNV 728
Query: 55 LQSELASTNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCD 114
L+S + ++ L+ V A L++ ++TI L LS E ST
Sbjct: 729 LRSTITVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHL----RLTLSELESSTDQ 784
Query: 115 MKRAIETRDRKLTVLHEKIN-SHLTLFDSIEKEAFSIKQ---VVDNVECVPYLQKTLSAK 170
+K + +RDR+++ L +++ SH + ++ + ++K+ + D++ + + +S++
Sbjct: 785 LKDLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSE 844
Query: 171 DVVIQNLISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCND 225
+++ I EKE + V + R + IA+ +E+ ML D
Sbjct: 845 ---LEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQAED 896
>UNIPROTKB|F1PT61 [details] [associations]
symbol:MYH16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003779 "actin binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00650000092896 InterPro:IPR015650
PANTHER:PTHR13140:SF22 OMA:DEDARQH EMBL:AAEX03004277
EMBL:AAEX03004278 Ensembl:ENSCAFT00000024005 Uniprot:F1PT61
Length = 1930
Score = 126 (49.4 bits), Expect = 0.00030, P = 0.00030
Identities = 81/364 (22%), Positives = 150/364 (41%)
Query: 3 LLRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELAST 62
L ++ K K L++ I++ R E+E + +K + + R+L+ L++ LA T
Sbjct: 901 LTQMMKTKMDLESQISDMRERLEEEEGTAASLSATKRKLEGEMSDLKRDLEGLETTLAKT 960
Query: 63 NELCQKLERKVSYLQNDNALLENK----QKELKETINRLLQYRENFLSAYEESTCDMKRA 118
+ Q L+ +V L D +L E+ QKE K + L Q + L A E+ + +
Sbjct: 961 EKEKQALDHRVRTLTGDLSLREDSIAKLQKE-KRALEELHQKTLDDLQAEEDKVNHLTKT 1019
Query: 119 IETRDRKLTVLHEKINSHLTLFDSIEK---EAFS-IKQVVDNVECVPY----LQKTLSAK 170
++ L + + +EK +A S +K +DN+ + L++ + +
Sbjct: 1020 NSKLSTQIHELEDNWEQEKKIRAEVEKARRKAESDLKMTIDNLNDMERSKLDLEEVVKKR 1079
Query: 171 DVVIQNLISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVN 230
D+ I ++ S+ E L L+ Q I + +E +++ +D+
Sbjct: 1080 DMEINSVNSKYEDEQSLNSTLQRKLKEHQARIEELEEELEAERSMRAKVEKQRSDLSRDL 1139
Query: 231 EDTRWLDRVKDANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRENNNFSSCVPE 290
ED DR+++A GG A+S +NR K A + R ++ E
Sbjct: 1140 EDLS--DRLEEA---GG------ATSAQIEQNR------KREAELLKLRRELEEAALQSE 1182
Query: 291 LAGXXXXXXXXXXXXXXXTNI--LMRISAKDVKDTCVVSAHHPDSECSMTQAETSKESRL 348
A ++ L R+ +K KD V+ A D SM ET ++S++
Sbjct: 1183 AAASTLRKKHTDSMAELTEHVENLQRVKSKLEKDKQVMKAEIDDLNASM---ETVQKSKM 1239
Query: 349 NSNA 352
N+ A
Sbjct: 1240 NAEA 1243
>ZFIN|ZDB-GENE-040910-6 [details] [associations]
symbol:sycp1 "synaptonemal complex protein 1"
species:7955 "Danio rerio" [GO:0000795 "synaptonemal complex"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] InterPro:IPR008827 Pfam:PF05483
ZFIN:ZDB-GENE-040910-6 GO:GO:0007130 GO:GO:0000795 CTD:6847
PANTHER:PTHR18878 GeneTree:ENSGT00390000003368 OMA:KITEMVA
EMBL:BX005150 IPI:IPI00487271 RefSeq:NP_001112366.1
UniGene:Dr.107962 Ensembl:ENSDART00000011876 GeneID:402797
KEGG:dre:402797 NextBio:20816630 ArrayExpress:F1QYS1 Bgee:F1QYS1
Uniprot:F1QYS1
Length = 1000
Score = 123 (48.4 bits), Expect = 0.00030, P = 0.00030
Identities = 62/258 (24%), Positives = 118/258 (45%)
Query: 17 IAETRH----LKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNE-LCQKLER 71
+ ET+H L+E E +H Q ++ EE+ + +++L+ EL L KLE+
Sbjct: 275 LQETQHICSVLEESSRKHQELLHSATQDREALEEKLNV-IQQLKWELEENQRVLTYKLEQ 333
Query: 72 KVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRDRKLTVLHE 131
++N L + K E+ E +N + + R N L+ + + ++ ++ + ++ L
Sbjct: 334 T---MENHEKLFQKKDTEI-EDLNNIKEQRTNQLADMQLTVNSLQSSLTSEIQRAQDLET 389
Query: 132 KINSHLTLFDSIEKEA---FSIKQVVDNVECVPYLQKTLSAKDVVIQNLISEKEALHLEV 188
K++S + D EK A + Q VD+ E + L+K L K + ++ E +A ++
Sbjct: 390 KLSSVMN--DLSEKNAEIEVTKSQNVDHCEQLQILRKDLDEKSNSLWSIKEELKANETQI 447
Query: 189 GKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTR-WLDRVKDANYNGG 247
KL I ++ ++ + A H LK+ +I T N+ + L +V+ N N
Sbjct: 448 LKL----------ITSLEEKQSEANH----LKDTVENITTENKSMQETLTKVRCENENLQ 493
Query: 248 ERSPSKASSLTAPENRAS 265
E+ K + L E S
Sbjct: 494 EQVSLKEAKLKEMEEELS 511
>UNIPROTKB|E2R2W8 [details] [associations]
symbol:PDE4DIP "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0030016 "myofibril"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0019899 "enzyme binding"
evidence=ISS] [GO:0043623 "cellular protein complex assembly"
evidence=ISS] GO:GO:0005634 GO:GO:0005794 GO:GO:0005813
GO:GO:0019899 GO:GO:0030016 GO:GO:0043623 InterPro:IPR012943
Pfam:PF07989 InterPro:IPR010630 Pfam:PF06758 PROSITE:PS51316
Ensembl:ENSCAFT00000017227 Uniprot:E2R2W8
Length = 1835
Score = 125 (49.1 bits), Expect = 0.00036, P = 0.00036
Identities = 50/211 (23%), Positives = 95/211 (45%)
Query: 1 MELLRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELA 60
+E+ +L + Q + +A+ + + +A E + ++ +E + L++LQ EL
Sbjct: 353 LEIQKLQRLVRQKERQLADAKRCVQFVEAAAHEREQQKEASWKHNQELRKALQQLQGELE 412
Query: 61 STN--------ELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENF---LSAYE 109
S + E C ++ ++Q+ N L +K++ L+E LLQYR+ L A E
Sbjct: 413 SKSQQLRTLETEKCNEIRAHEQHIQHLNHSLSHKEQLLQE-FRELLQYRDKSDKTLEANE 471
Query: 110 ESTCDMKRAIETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVV-DNVECVPYLQKTLS 168
+++ I+ RD L I+ + + EKE V + + L+ LS
Sbjct: 472 MLLEKLRQRIQDRD---VALERAIDEKFSALEEKEKELRQFHLAVRERDHDLERLRAILS 528
Query: 169 AKDVVIQNLISEKEALHLEVGKLGIILQRIQ 199
+ + +Q++ S A LEV +L Q +Q
Sbjct: 529 SNEATMQSMESLLRAKGLEVEQLSATCQNLQ 559
>UNIPROTKB|E1BJ15 [details] [associations]
symbol:CEP290 "Centrosomal protein of 290 kDa" species:9913
"Bos taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042384 "cilium assembly"
evidence=IEA] [GO:0036038 "TCTN-B9D complex" evidence=IEA]
[GO:0032391 "photoreceptor connecting cilium" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000930 "gamma-tubulin complex" evidence=IEA]
InterPro:IPR026201 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045893 GO:GO:0009986 GO:GO:0015031 GO:GO:0060041
GO:GO:0036038 GO:GO:0042384 GeneTree:ENSGT00700000104127
GO:GO:0000930 GO:GO:0032391 PANTHER:PTHR18879 OMA:IVAENER
EMBL:DAAA02012650 EMBL:DAAA02012651 IPI:IPI00703782 PRIDE:E1BJ15
Ensembl:ENSBTAT00000005450 ArrayExpress:E1BJ15 Uniprot:E1BJ15
Length = 2475
Score = 126 (49.4 bits), Expect = 0.00039, P = 0.00039
Identities = 58/243 (23%), Positives = 109/243 (44%)
Query: 5 RLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSR-NLKELQSELASTN 63
R S+ K + + T+ + EK E++ +Q+ K R + ++QS++
Sbjct: 353 RDSQIKMLTEQVEQYTKEM-EKNTFIIEDLKNELQRNKGASTLTQRTHYMKIQSKVQILE 411
Query: 64 ELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRA---IE 120
E ++ ER + D K KEL ET+ RL Y E+ + E++ ++K I+
Sbjct: 412 ERTKEAERTAELAEAD---AREKDKELVETLKRLKDY-ESGVYGLEDAVIEIKNCKNQIK 467
Query: 121 TRDRKLTVLHEKINS-HLTLFDSI-EKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLI 178
RDR++ VL ++IN L + D + E EA + ++ + L + + K + Q
Sbjct: 468 IRDREIEVLTKEINKLELKINDFLDENEALRERMGLEPTTMID-LTEFRNTKSLKQQQYR 526
Query: 179 SEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDR 238
+E + L E+ L ++ I M QE T+ ++ E+ N +++ R +R
Sbjct: 527 AENQILLKEIESLEEERLDLKKKIRQMAQEKGKRTVTSGLIAEDLNLTEHFSQENRMGER 586
Query: 239 VKD 241
D
Sbjct: 587 KSD 589
>UNIPROTKB|F1NWT9 [details] [associations]
symbol:LOC100858793 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR026202 GO:GO:0005794 GeneTree:ENSGT00700000104188
PANTHER:PTHR18887 EMBL:AADN02073643 EMBL:AADN02073644
EMBL:AADN02073645 EMBL:AADN02073646 EMBL:AADN02073647
EMBL:AADN02073648 EMBL:AADN02073649 EMBL:AADN02073650
EMBL:AADN02073651 IPI:IPI00586391 Ensembl:ENSGALT00000034711
OMA:YEVENTE ArrayExpress:F1NWT9 Uniprot:F1NWT9
Length = 1732
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 62/271 (22%), Positives = 117/271 (43%)
Query: 17 IAETRHLKEKENSAT---EEIHLLVQKQKRNEEEYSRNLKELQSELASTNELCQKLERKV 73
+A HL E E+ T E+I +K + E + + + L+S++ N L +K +
Sbjct: 1008 VAYHNHLMECESQITLLKEQISKSSEKLQETENKQRKEAEYLKSQIEENNTLKEKWNSLL 1067
Query: 74 SYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRA-IETRDRKLTVLHEK 132
+N LEN+ K +K+T N+L+ E+ + +E + R IE + + T+ E
Sbjct: 1068 KEKENKEQTLENELKSIKDTYNKLVL--ED--AKKDEELAQLSRKLIEHAEHQETIKKE- 1122
Query: 133 INSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLISEKEALHLEVGKLG 192
+ + S++K+ ++Q N E L + L K+ + L ++ + ++ K+
Sbjct: 1123 LQEKQEIIISLDKKLEFLEQ--QNEETKLKLTEDLKVKETCCKELNNQLSEIQKQISKME 1180
Query: 193 IILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDRVKDANYNGGERSPS 252
I Q A + Q D L + N++ + + +DRVK + +
Sbjct: 1181 IETQEKASANKQL-QADLEGKEIRLAEQVKANEL--LKKS---MDRVKKEKQQLVSENEN 1234
Query: 253 KASSLTAPENRASPLCQKHIALGSQFRENNN 283
+ L N+ S C I SQ +ENN+
Sbjct: 1235 LSKLLDV--NKLSE-CSTLIQELSQSKENNS 1262
>UNIPROTKB|Q9X0R4 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:243274 "Thermotoga maritima MSB8" [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
EMBL:AE000512 GenomeReviews:AE000512_GR GO:GO:0007062
SUPFAM:SSF75553 KO:K03529 TIGRFAMs:TIGR02168 EMBL:AGIJ01000001
PIR:A72287 RefSeq:NP_228987.1 PDB:1E69 PDB:1GXJ PDB:1GXK PDB:1GXL
PDBsum:1E69 PDBsum:1GXJ PDBsum:1GXK PDBsum:1GXL SMR:Q9X0R4
GeneID:898303 KEGG:tma:TM1182 PATRIC:23937304 OMA:NNEVHAL
ProtClustDB:CLSK875623 EvolutionaryTrace:Q9X0R4 Uniprot:Q9X0R4
Length = 1170
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 52/206 (25%), Positives = 103/206 (50%)
Query: 13 LQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNELCQKLERK 72
L+ L+ E R +E N+ E+I + + K+N E R+L E EL ++ +L K
Sbjct: 744 LEKLLVEYRAKEEGLNARREKIFEEIDELKQNRENLQRSLTEYSEELEKEKKILDELNEK 803
Query: 73 VSYLQND-NALLENK---QKELKET---INRLLQYRENF---LSAYEESTCDMKRAIETR 122
+ L+ + LLE K +KE+++T I R+ + E+ +++ EE + ++ I
Sbjct: 804 IFTLRAEVGNLLETKDRYEKEMRDTGKMIERIARETEDIKLQMTSLEEEMENYRKFIREH 863
Query: 123 DRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLISEKE 182
+R++ L ++++S +F++++ S K+ E + LQ+ + D L EKE
Sbjct: 864 EREIEHLKKEMDS---VFEAMKLHR-SGKE-----EKMRELQEVENRMD----ELKEEKE 910
Query: 183 ALHLEVGKLGIILQRIQDAIATMNQE 208
L + ++ + LQ + IA + +E
Sbjct: 911 RLRNHLHQIDLALQETRLKIANLLEE 936
>UNIPROTKB|Q3V6T2 [details] [associations]
symbol:CCDC88A "Girdin" species:9606 "Homo sapiens"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IDA] [GO:0016477 "cell migration"
evidence=IMP] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016044 "cellular membrane organization" evidence=IDA]
[GO:0043422 "protein kinase B binding" evidence=IPI] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0003779
"actin binding" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0030032 "lamellipodium assembly" evidence=IMP]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0001932 "regulation of protein phosphorylation"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0032148 "activation of protein kinase B activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0031929 "TOR signaling
cascade" evidence=ISS] [GO:0010975 "regulation of neuron projection
development" evidence=ISS] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005783 GO:GO:0005829 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0003779 GO:GO:0000226 GO:GO:0016477
GO:GO:0006275 GO:GO:0031929 GO:GO:0006260 GO:GO:0031410
GO:GO:0030027 GO:GO:0016023 GO:GO:0042127 GO:GO:0032148
eggNOG:NOG12793 GO:GO:0035091 GO:GO:0032956 GO:GO:0030032
GO:GO:0008017 GO:GO:0010975 GO:GO:0016044 HOVERGEN:HBG057867
EMBL:AB201172 EMBL:AB125644 EMBL:AC019198 EMBL:AC092176
EMBL:AC012358 EMBL:BC132736 EMBL:BC144320 EMBL:BX537985
EMBL:BX538154 EMBL:BX648138 IPI:IPI00171134 IPI:IPI00654603
IPI:IPI00892916 IPI:IPI00893288 IPI:IPI00943263
RefSeq:NP_001129069.1 RefSeq:NP_001241872.1 RefSeq:NP_060554.3
UniGene:Hs.292925 ProteinModelPortal:Q3V6T2 SMR:Q3V6T2
IntAct:Q3V6T2 STRING:Q3V6T2 PhosphoSite:Q3V6T2 DMDM:147644956
PaxDb:Q3V6T2 PRIDE:Q3V6T2 Ensembl:ENST00000263630
Ensembl:ENST00000336838 Ensembl:ENST00000413716
Ensembl:ENST00000436346 GeneID:55704 KEGG:hsa:55704 UCSC:uc002ryu.2
UCSC:uc002ryv.2 UCSC:uc002ryw.3 UCSC:uc010yoz.1 CTD:55704
GeneCards:GC02M055514 HGNC:HGNC:25523 HPA:HPA038101 MIM:609736
neXtProt:NX_Q3V6T2 PharmGKB:PA162381751 InParanoid:Q3V6T2
OMA:TGFRSKQ ChiTaRS:CCDC88A GenomeRNAi:55704 NextBio:60553
ArrayExpress:Q3V6T2 Bgee:Q3V6T2 CleanEx:HS_CCDC88A
Genevestigator:Q3V6T2 Uniprot:Q3V6T2
Length = 1871
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 60/252 (23%), Positives = 111/252 (44%)
Query: 5 RLSKFKFQLQALIAETRHLKEKENSATE---EIHLL------VQKQKRNEEEYSRNLKEL 55
+LSK +F+ + + E H KEK A E E+H L +QK+ N + ++ L
Sbjct: 602 KLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEAL 661
Query: 56 QSELASTNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTC-D 114
+ E + +KL++ + +N LE+ +KE + L+ R N E C
Sbjct: 662 EQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNV----ESLKCAS 717
Query: 115 MKRA-IETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPY-LQKTLSAKDV 172
MK A ++ +++L E++ L L + K+ ++ ++ LQKTL +
Sbjct: 718 MKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNK 777
Query: 173 VIQNLISEKEALHLEVGKLGIILQRIQDAIATMNQ---EDNNAFHTALMLKENCNDIGTV 229
IQ L SE + L +E L L+ ++ + + Q E+ + L+++ +
Sbjct: 778 KIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKE 837
Query: 230 NEDTRWLDRVKD 241
N+ R +KD
Sbjct: 838 NKRLRQQAEIKD 849
>UNIPROTKB|F1NDQ5 [details] [associations]
symbol:CCDC88A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006275 "regulation of DNA
replication" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0010975 "regulation of neuron projection
development" evidence=IEA] [GO:0016044 "cellular membrane
organization" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0031929 "TOR signaling cascade"
evidence=IEA] [GO:0032148 "activation of protein kinase B activity"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0035091 "phosphatidylinositol
binding" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043422 "protein kinase B binding"
evidence=IEA] InterPro:IPR008636 Pfam:PF05622 GO:GO:0005783
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0000226
GO:GO:0016477 GO:GO:0006275 GO:GO:0031929 GO:GO:0031410
GO:GO:0030027 GO:GO:0042127 GO:GO:0032148 GO:GO:0035091
GO:GO:0032956 GO:GO:0030032 GO:GO:0016044
GeneTree:ENSGT00690000101702 OMA:TGFRSKQ EMBL:AADN02046834
IPI:IPI00582991 Ensembl:ENSGALT00000013157 ArrayExpress:F1NDQ5
Uniprot:F1NDQ5
Length = 1891
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00048
Identities = 50/215 (23%), Positives = 99/215 (46%)
Query: 5 RLSKFKFQLQALIAETRHLKEK-ENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTN 63
RL K + + Q+L+ L+ ++S +V+ +K N+ ++ ++EL+ E+
Sbjct: 460 RLLKLEKENQSLLKTVEELRSTMDDSVGGNSSRIVKMEKENQR-LNKKIEELEKEIVQEK 518
Query: 64 ELCQKLERKVSYLQNDNALLENKQKELKETINR---LLQY---REN--FLSAYEESTCDM 115
+ Q + L + LE K + L+E + R LL+ R N S + S
Sbjct: 519 QSLQDNQNLSKDLMKEKEQLEKKFETLRENLERQIKLLEQENERSNQTIASLRQRSQISA 578
Query: 116 KRAIETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVV-- 173
+ ++ +++ +LHE I + + +E F IKQV +E Y +K A+++
Sbjct: 579 EAQMKEIEKENKILHESIKETSSKLNKLE---FEIKQVRKEME--HYKEKAERAEELENE 633
Query: 174 IQNLISEKEALHLEVGKLGIILQRIQDAIATMNQE 208
+ +L E E L ++ L I ++I+ A+ N +
Sbjct: 634 LHHLEKENELLQKKIANLSITCEKIE-ALEKENSD 667
>UNIPROTKB|E7ESD9 [details] [associations]
symbol:RAD50 "DNA repair protein RAD50" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0030870 "Mre11 complex" evidence=IEA]
InterPro:IPR004584 GO:GO:0005524 GO:GO:0006281 GO:GO:0030870
PANTHER:PTHR18867 TIGRFAMs:TIGR00606 EMBL:AC116366 EMBL:AC004042
HGNC:HGNC:9816 ChiTaRS:RAD50 EMBL:AC004041 IPI:IPI00894448
ProteinModelPortal:E7ESD9 SMR:E7ESD9 Ensembl:ENST00000423956
ArrayExpress:E7ESD9 Bgee:E7ESD9 Uniprot:E7ESD9
Length = 551
Score = 118 (46.6 bits), Expect = 0.00050, P = 0.00050
Identities = 59/266 (22%), Positives = 120/266 (45%)
Query: 1 MELLRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRN-LKELQSEL 59
MEL L ++K + I + KE + ++++EI K NE + +N LKE++ L
Sbjct: 208 MELKYLKQYK-EKACEIRDQITSKEAQLTSSKEI----VKSYENELDPLKNRLKEIEHNL 262
Query: 60 ASTNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAI 119
+ KL+ ++ L + +E EL+E + ++ Q + L+ + +R +
Sbjct: 263 SKI----MKLDNEIKALDSRKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNH---QRTV 315
Query: 120 ETRDRKLTVLH---EKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQN 176
++RKL H EK+N L + EK ++Q ++ + Q+ + A+D +IQ+
Sbjct: 316 REKERKLVDCHRELEKLNKESRLLNQ-EKSELLVEQGRLQLQADRH-QEHIRARDSLIQS 373
Query: 177 LISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWL 236
L ++ E E G ++I++ + + TA L + + T+ + + +
Sbjct: 374 LATQLELDGFERGPFSE--RQIKNFHKLVRERQEGEAKTANQLMNDFAEKETLKQ--KQI 429
Query: 237 DRVKDANYNGGERSPSKASSLTAPEN 262
D ++D G K+ L+ +N
Sbjct: 430 DEIRDKKTGLGRIIELKSEILSKKQN 455
>UNIPROTKB|E1C849 [details] [associations]
symbol:CIT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0001726 "ruffle" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0007091 "metaphase/anaphase
transition of mitotic cell cycle" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0050774
"negative regulation of dendrite morphogenesis" evidence=IEA]
InterPro:IPR000719 InterPro:IPR000961 InterPro:IPR001180
InterPro:IPR001849 InterPro:IPR002219 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR017892 Pfam:PF00069 Pfam:PF00433 Pfam:PF00780
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS00479 PROSITE:PS50003
PROSITE:PS50011 PROSITE:PS50081 PROSITE:PS50219 PROSITE:PS51285
SMART:SM00036 SMART:SM00109 SMART:SM00133 SMART:SM00220
SMART:SM00233 GO:GO:0005524 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0035556 GO:GO:0046872
GO:GO:0015629 SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0000070
GO:GO:0001726 GO:GO:0033205 GO:GO:0007091 GO:GO:0005083 OMA:MKAKDQG
InterPro:IPR017405 PANTHER:PTHR22988:SF1
GeneTree:ENSGT00690000101983 EMBL:AADN02043189 EMBL:AADN02043190
EMBL:AADN02043191 EMBL:AADN02043192 EMBL:AADN02043193
IPI:IPI00582579 Ensembl:ENSGALT00000011895 Uniprot:E1C849
Length = 2054
Score = 124 (48.7 bits), Expect = 0.00053, P = 0.00053
Identities = 47/234 (20%), Positives = 107/234 (45%)
Query: 2 ELLRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQK-QKRNEEEYSRNLKELQSELA 60
+LL + + L+ + ++ +EN E+I Q+ Q+ E+ K ++++
Sbjct: 689 KLLEAEERRHSLENQVKRLETVERRENRLKEDIQTKSQQIQQMAEKILELEEKHREAQI- 747
Query: 61 STNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIE 120
S L +L++K + + +LEN+ K K+ ++ + EN L +EE + + +
Sbjct: 748 SAQHLELQLKQKEQFYEEKLKVLENQMK--KDLADK--EALENMLRRHEEEAREKCKVLA 803
Query: 121 TRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLISE 180
+ + + KI S L I E ++ N + Q+ + A++ +I L +
Sbjct: 804 EQKAMINAMDSKIRS---LEQRIV-ELSEANKLAANSSL--FTQRNMKAQEEMISELRQQ 857
Query: 181 KEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTR 234
K L + GKL +++++ + M+ +D+ + L L+ ++G +E+ +
Sbjct: 858 KFYLETQAGKLEAQNRKLEEQLEKMSHQDHTDKNRLLELETRLREVGLEHEEQK 911
>RGD|1310664 [details] [associations]
symbol:Tpr "translocated promoter region, nuclear basket
protein" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0000189 "MAPK import into nucleus" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0003729 "mRNA binding" evidence=ISO]
[GO:0005487 "nucleocytoplasmic transporter activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005868 "cytoplasmic dynein complex"
evidence=ISO] [GO:0006404 "RNA import into nucleus" evidence=ISO]
[GO:0006405 "RNA export from nucleus" evidence=ISO] [GO:0006999
"nuclear pore organization" evidence=ISO] [GO:0007094 "mitotic
spindle assembly checkpoint" evidence=ISO] [GO:0010965 "regulation
of mitotic sister chromatid separation" evidence=ISO] [GO:0015631
"tubulin binding" evidence=ISO] [GO:0019898 "extrinsic to membrane"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=ISO] [GO:0031453 "positive regulation of heterochromatin
assembly" evidence=ISO] [GO:0031965 "nuclear membrane"
evidence=ISO] [GO:0031990 "mRNA export from nucleus in response to
heat stress" evidence=ISO] [GO:0034399 "nuclear periphery"
evidence=ISO] [GO:0034605 "cellular response to heat" evidence=ISO]
[GO:0042307 "positive regulation of protein import into nucleus"
evidence=ISO] [GO:0042405 "nuclear inclusion body" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0044615 "nuclear pore nuclear basket" evidence=ISO] [GO:0045947
"negative regulation of translational initiation" evidence=ISO]
[GO:0046832 "negative regulation of RNA export from nucleus"
evidence=ISO] [GO:0051019 "mitogen-activated protein kinase
binding" evidence=ISO] [GO:0070840 "dynein complex binding"
evidence=ISO] [GO:0070849 "response to epidermal growth factor
stimulus" evidence=ISO] [GO:0072686 "mitotic spindle" evidence=ISO]
[GO:0090267 "positive regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=ISO] [GO:0090316 "positive regulation
of intracellular protein transport" evidence=ISO] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=ISO]
[GO:0005215 "transporter activity" evidence=ISO] [GO:0006606
"protein import into nucleus" evidence=ISO] [GO:0006611 "protein
export from nucleus" evidence=ISO] [GO:0010793 "regulation of mRNA
export from nucleus" evidence=ISO] [GO:0031647 "regulation of
protein stability" evidence=ISO] [GO:0042306 "regulation of protein
import into nucleus" evidence=ISO] [GO:0043495 "protein anchor"
evidence=ISO] [GO:0043578 "nuclear matrix organization"
evidence=ISO] [GO:0046825 "regulation of protein export from
nucleus" evidence=ISO] [GO:0051292 "nuclear pore complex assembly"
evidence=ISO] RGD:1310664 eggNOG:NOG12793 HOGENOM:HOG000139431
IPI:IPI00950468 UniGene:Rn.58980 EMBL:BC101883
ProteinModelPortal:Q3T1J7 STRING:Q3T1J7 UCSC:RGD:1310664
InParanoid:Q3T1J7 Genevestigator:Q3T1J7 Uniprot:Q3T1J7
Length = 357
Score = 115 (45.5 bits), Expect = 0.00054, P = 0.00054
Identities = 64/293 (21%), Positives = 123/293 (41%)
Query: 12 QLQALIAETRHLKEKENSATE-EIHLLVQKQKR----NEEEY---SRNLKELQSELASTN 63
+L L T++ EK + + EI L + ++ +E++Y + L + Q L +
Sbjct: 13 ELNKLPKSTQNKLEKFLAEQQSEIDCLKGRHEKFKVESEQQYFEIEKRLSQSQERLVNET 72
Query: 64 ELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRD 123
CQ L ++ L N +L K KEL+ +R L + F A EE + + I T +
Sbjct: 73 RECQNLRLELEKLNNQVKVLTEKNKELETAQDRNLGIQSQFTRAKEELEAEKRDLIRTNE 132
Query: 124 RKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQ----NLIS 179
R L +++ +LT + +++ +K+ + L A DV ++ L
Sbjct: 133 R----LSQEVE-YLT--EDVKRLNEKLKESNTTKGELQLKLDELQASDVTVKYREKRLEQ 185
Query: 180 EKEALHLEVGKLGIILQRIQDAIATMNQEDNNAF-HTALMLKENCNDIGTVNEDTRWLDR 238
EKE LH + L L+ D + + +E N L+ ++ + E ++
Sbjct: 186 EKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCTLENKKEEVLRLEEQ---MNG 242
Query: 239 VKDANYNGGERSPSKASSLT-APENRASPLCQKHIALGSQFRENNNFSSCVPE 290
+K +N + + + L A E +AS + H L + + +N + S +
Sbjct: 243 LKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADD 295
>RGD|621677 [details] [associations]
symbol:Pmfbp1 "polyamine modulated factor 1 binding protein 1"
species:10116 "Rattus norvegicus" [GO:0001520 "outer dense fiber"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0007010
"cytoskeleton organization" evidence=NAS] RGD:621677 GO:GO:0007010
GO:GO:0001520 HSSP:Q05195 CTD:83449 eggNOG:NOG138716
HOGENOM:HOG000060143 HOVERGEN:HBG072641 EMBL:AF092090
IPI:IPI00209167 RefSeq:NP_599220.1 UniGene:Rn.51502
ProteinModelPortal:Q9Z221 PhosphoSite:Q9Z221 PRIDE:Q9Z221
GeneID:171414 KEGG:rno:171414 UCSC:RGD:621677 NextBio:622303
ArrayExpress:Q9Z221 Genevestigator:Q9Z221 Uniprot:Q9Z221
Length = 971
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 73/304 (24%), Positives = 127/304 (41%)
Query: 6 LSKFKFQLQALIAETRHLKEKENSATEEIHLL--VQKQKRNE----EEYSRNLKELQSEL 59
L K + + A RH + +L +Q+QK ++ EEY +K+L+ EL
Sbjct: 239 LIKLRADFASYTATHRHPPTSSEDCEDITKILKYLQEQKDSQCLHVEEYQNLVKDLRLEL 298
Query: 60 ASTNELCQKLERKVSYLQND-NALLENK----QKELKETINRLLQYR-ENFLSAYEEST- 112
+ +E +K+ + + L+ D + L E +K+ KET+ LQYR ++ Y ES
Sbjct: 299 EAVSEQKKKIMKDMMKLELDLHGLREETSCVIEKKDKETV--FLQYRLQDLQQQYTESQK 356
Query: 113 CDMKR--AIETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAK 170
+K+ ++ +D +L L +K+ LF +EKE K E LQ+ +
Sbjct: 357 LSLKKDKLLQDKDERLNELEKKLTQVQCLF--LEKETELEKLQSTTKELDANLQEVRQST 414
Query: 171 DVVIQNLISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVN 230
+ + E L E+ KL L+ ++ + +Q + A + N D
Sbjct: 415 SKI------DNEGLRSEIQKLKESLEEAREQLRVSDQNLSQCKDEAHLSANNLEDAHRKL 468
Query: 231 EDTRWLDRVKD---ANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRENNN-FSS 286
E+ D+ KD + + K SS T E + + Q+ + L S+ E SS
Sbjct: 469 ENCLLQDKRKDDVIKDLQSQLQKLQKESSETEEERKNNR--QQLLELSSELNEGQRRLSS 526
Query: 287 CVPE 290
E
Sbjct: 527 AEKE 530
>UNIPROTKB|E7EN38 [details] [associations]
symbol:RAD50 "DNA repair protein RAD50" species:9606 "Homo
sapiens" [GO:0004518 "nuclease activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030870 "Mre11
complex" evidence=IEA] InterPro:IPR004584 InterPro:IPR007517
Pfam:PF04423 GO:GO:0005524 GO:GO:0008270 GO:GO:0006281
GO:GO:0090305 GO:GO:0004518 GO:GO:0030870 InterPro:IPR013134
PANTHER:PTHR18867 TIGRFAMs:TIGR00606 PROSITE:PS51131 EMBL:AC116366
EMBL:AC004042 HGNC:HGNC:9816 ChiTaRS:RAD50 EMBL:AC004041
IPI:IPI00658205 ProteinModelPortal:E7EN38 SMR:E7EN38 PRIDE:E7EN38
Ensembl:ENST00000453394 ArrayExpress:E7EN38 Bgee:E7EN38
Uniprot:E7EN38
Length = 660
Score = 118 (46.6 bits), Expect = 0.00063, P = 0.00063
Identities = 59/266 (22%), Positives = 120/266 (45%)
Query: 1 MELLRLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRN-LKELQSEL 59
MEL L ++K + I + KE + ++++EI K NE + +N LKE++ L
Sbjct: 208 MELKYLKQYK-EKACEIRDQITSKEAQLTSSKEI----VKSYENELDPLKNRLKEIEHNL 262
Query: 60 ASTNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAI 119
+ KL+ ++ L + +E EL+E + ++ Q + L+ + +R +
Sbjct: 263 SKI----MKLDNEIKALDSRKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNH---QRTV 315
Query: 120 ETRDRKLTVLH---EKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQN 176
++RKL H EK+N L + EK ++Q ++ + Q+ + A+D +IQ+
Sbjct: 316 REKERKLVDCHRELEKLNKESRLLNQ-EKSELLVEQGRLQLQADRH-QEHIRARDSLIQS 373
Query: 177 LISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWL 236
L ++ E E G ++I++ + + TA L + + T+ + + +
Sbjct: 374 LATQLELDGFERGPFSE--RQIKNFHKLVRERQEGEAKTANQLMNDFAEKETLKQ--KQI 429
Query: 237 DRVKDANYNGGERSPSKASSLTAPEN 262
D ++D G K+ L+ +N
Sbjct: 430 DEIRDKKTGLGRIIELKSEILSKKQN 455
>SGD|S000001662 [details] [associations]
symbol:COY1 "Golgi membrane protein with similarity to
mammalian CASP" species:4932 "Saccharomyces cerevisiae" [GO:0003674
"molecular_function" evidence=ND] [GO:0000139 "Golgi membrane"
evidence=IEA;IGI] [GO:0048193 "Golgi vesicle transport"
evidence=IGI] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030173
"integral to Golgi membrane" evidence=IEA] InterPro:IPR012955
Pfam:PF08172 SGD:S000001662 GO:GO:0000139 GO:GO:0030173
EMBL:BK006944 GO:GO:0006891 GO:GO:0048193 EMBL:X74151
eggNOG:NOG325167 KO:K09313 OMA:DPYPLLE OrthoDB:EOG470XRD
EMBL:Z28179 PIR:S38011 RefSeq:NP_012742.1 ProteinModelPortal:P34237
DIP:DIP-2851N IntAct:P34237 MINT:MINT-438873 STRING:P34237
PaxDb:P34237 EnsemblFungi:YKL179C GeneID:853675 KEGG:sce:YKL179C
CYGD:YKL179c GeneTree:ENSGT00690000102509 HOGENOM:HOG000205115
NextBio:974628 Genevestigator:P34237 GermOnline:YKL179C
Uniprot:P34237
Length = 679
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 67/250 (26%), Positives = 107/250 (42%)
Query: 28 NSATEEIHL----LVQKQKRNEEEYSRNLKELQSELASTNELCQKLERKVSYLQNDNALL 83
N T+E+ + Q +KRNEE S L + SE EL K E K++ L+++NALL
Sbjct: 236 NLVTQELETTQARIYQLEKRNEE-LSGALAKATSEAEKETELHAK-ELKLNQLESENALL 293
Query: 84 E-NKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRDRKLTVL--HEKINSHLTLF 140
+ ++E K T + + + +E S ES K +ET RKL + KI L+
Sbjct: 294 SASYEQERKSTSHAINELKEQLNSVVAESE-SYKSELETVRRKLNNYSDYNKIKEELSAL 352
Query: 141 DSIE---KEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLISE----KEALHLEVGKLGI 193
IE E S + + + +L + + +Q ++E A E +L
Sbjct: 353 KKIEFGVNEDDSDNDIRSEDKNDNTFESSLLSANKKLQATLAEYRSKSTAQEEERNELKK 412
Query: 194 ILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDRVKDANYNGGERSPSK 253
+ +++ IAT+ +E N T L EN + NE + V N S
Sbjct: 413 SVDQLKQQIATL-KEANEKLETDLEKVENVSP--HFNETASMMSGVTRQMNNRTSHKMSP 469
Query: 254 ASSLTA-PEN 262
SS+ PE+
Sbjct: 470 TSSIIGIPED 479
>FB|FBgn0039152 [details] [associations]
symbol:Rootletin "Rootletin" species:7227 "Drosophila
melanogaster" [GO:0035253 "ciliary rootlet" evidence=ISS;IDA]
EMBL:AE014297 GeneTree:ENSGT00700000104019 KO:K16469
InterPro:IPR008545 Pfam:PF05701 FlyBase:FBgn0039152
RefSeq:NP_651216.2 ProteinModelPortal:Q9VCD1
EnsemblMetazoa:FBtr0304161 GeneID:42860 KEGG:dme:Dmel_CG6129
UCSC:CG6129-RB InParanoid:Q9VCD1 OMA:MGRADIN PhylomeDB:Q9VCD1
GenomeRNAi:42860 NextBio:830960 ArrayExpress:Q9VCD1 Bgee:Q9VCD1
Uniprot:Q9VCD1
Length = 2048
Score = 123 (48.4 bits), Expect = 0.00068, P = 0.00068
Identities = 62/281 (22%), Positives = 128/281 (45%)
Query: 5 RLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQK-RNEE-EYSRN-LKELQSELAS 61
+L K + L+ L E +L+ I L +K K RN+E + R L + + +LA+
Sbjct: 1519 KLGKLQAMLRNLQEEKSNLETDRKMKISAIQALEEKLKHRNDECQMLRERLAQTEMQLAA 1578
Query: 62 TNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLS----AYEESTCDMKR 117
T+E + E ++ + + L+N++++L+E + ++ + R + L A E ++
Sbjct: 1579 TSEENGQNEERLEKSRQQCSKLDNEKRQLQEELAKV-EGRASKLELQRVAMEGDLTRLQM 1637
Query: 118 AIETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNL 177
A++ +D + + E++ + +E ++K VD ++ LQK+ ++ L
Sbjct: 1638 ALQEKDCSIRQMAERLENQNRALTQLEDRCTALKSTVDQLK--ERLQKSAVSET----QL 1691
Query: 178 ISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGT-VNEDTRWL 236
E + L E+ + G Q +D + + + A + +L E + T +NE L
Sbjct: 1692 RGEIKTLQKELSEQGHCSQANEDKLKLVQKSLQTAENEKRILTERLDSAQTNLNE----L 1747
Query: 237 DRVKDANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQ 277
R + A +G +R + + L R++ Q IA +Q
Sbjct: 1748 RRSQQAQLDGNQRLQEQVTDLEV--QRSALESQLRIAKWNQ 1786
>UNIPROTKB|F8VS29 [details] [associations]
symbol:CEP290 "Centrosomal protein of 290 kDa" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0060271 "cilium morphogenesis"
evidence=IEA] InterPro:IPR026201 GO:GO:0005634 GO:GO:0005813
GO:GO:0060271 PANTHER:PTHR18879 EMBL:AC091516 HGNC:HGNC:29021
IPI:IPI01023020 ProteinModelPortal:F8VS29 Ensembl:ENST00000547926
ArrayExpress:F8VS29 Bgee:F8VS29 Uniprot:F8VS29
Length = 589
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 56/242 (23%), Positives = 106/242 (43%)
Query: 5 RLSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNE 64
R S+ K + + T+ + EK E++ +Q+ K + ++QS L E
Sbjct: 302 RDSQIKMLTEQVEQYTKEM-EKNTCIIEDLKNELQRNKGASTLSQQTHMKIQSTLDILKE 360
Query: 65 LCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRA---IET 121
++ ER + D K KEL E + RL Y E+ + E++ ++K I+
Sbjct: 361 KTKEAERTAELAEAD---AREKDKELVEALKRLKDY-ESGVYGLEDAVVEIKNCKNQIKI 416
Query: 122 RDRKLTVLHEKINS-HLTLFDSI-EKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNLIS 179
RDR++ +L ++IN L + D + E EA + ++ + L + ++K + Q +
Sbjct: 417 RDREIEILTKEINKLELKISDFLDENEALRERVGLEPKTMID-LTEFRNSKHLKQQQYRA 475
Query: 180 EKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDRV 239
E + L E+ L ++ I M QE T+ + E+ N +++ R +R
Sbjct: 476 ENQILLKEIESLEEERLDLKKKIRQMAQERGKRSATSGLTTEDLNLTENISQGDRISERK 535
Query: 240 KD 241
D
Sbjct: 536 LD 537
>UNIPROTKB|E1BMK9 [details] [associations]
symbol:E1BMK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
InterPro:IPR003661 SMART:SM00388 GO:GO:0005739 GO:GO:0005813
GO:GO:0016020 GO:GO:0023014 GO:GO:0000155 GO:GO:0000160 OMA:MDLEMKQ
GeneTree:ENSGT00440000034932 EMBL:DAAA02022351 EMBL:DAAA02022352
EMBL:DAAA02022353 EMBL:DAAA02022354 EMBL:DAAA02022355
EMBL:DAAA02022356 EMBL:DAAA02022357 IPI:IPI00924070
Ensembl:ENSBTAT00000061355 Uniprot:E1BMK9
Length = 1409
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 66/258 (25%), Positives = 110/258 (42%)
Query: 6 LSKFKFQLQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNEL 65
L KF+L +A+ H+KE + + K+ E+ R L+S S NE+
Sbjct: 1118 LKSLKFEL---LAKEEHIKEMHEKMSRMERDITMKRHLIEDLKFRQKVNLESN-ESVNEM 1173
Query: 66 CQKLERKVSYLQNDNALLENKQKELKETINRL-LQYRENFLSAYEESTCDMKRAIETRDR 124
+ LE+KV L + NK+ + RL + +E S YEE K +E +D
Sbjct: 1174 LENLEKKVKTLTEE---CSNKKVSIDSLKQRLSVAVKEK--SQYEEMYQQTKEELEKKDV 1228
Query: 125 KLTVLHEKINSHLTLFDSIEKEAFSIKQ--VVDNVECVPYLQKTL---SAK----DVVIQ 175
KLT L KIN + IE A Q + + + + QK L S K + ++
Sbjct: 1229 KLTFLLSKINETESAMAEIETAASKHLQGLAMQSEQALEGAQKKLLLASEKVEEFTIFVK 1288
Query: 176 NLISE-KEALHLEVGKLGII--LQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTV--N 230
L+ E + +HL ++ + +Q+ +DA T + A +L + +D+ +
Sbjct: 1289 ALVRELQNDVHLIRRQIRELKKMQKNRDACKTSTHKAQTL--AASILNISRSDLEEILDT 1346
Query: 231 EDTRWLDRVKDANYNGGE 248
ED ++R K N E
Sbjct: 1347 EDEAEIERTKTEAENDKE 1364
>UNIPROTKB|E1C5U0 [details] [associations]
symbol:E1C5U0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000801 "central element" evidence=IEA]
[GO:0000802 "transverse filament" evidence=IEA] [GO:0001673 "male
germ cell nucleus" evidence=IEA] [GO:0007130 "synaptonemal complex
assembly" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] InterPro:IPR008827 Pfam:PF05483
GO:GO:0032880 GO:GO:0001673 GO:GO:0007130 GO:GO:0000801
GO:GO:0000802 PANTHER:PTHR18878 GeneTree:ENSGT00390000003368
EMBL:AADN02045023 IPI:IPI00578588 Ensembl:ENSGALT00000003960
OMA:KITEMVA Uniprot:E1C5U0
Length = 972
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 49/204 (24%), Positives = 94/204 (46%)
Query: 12 QLQALIAETRHLKEKENSATEEIH-LLVQKQKRNEEE--YSRNLKELQSELASTNELCQK 68
QL L A+ K T I+ LL++K++ +E+ + LK+LQ E +
Sbjct: 495 QLTTLNADLEREALKNEQLTVNINTLLLEKEQMAQEKSNMATELKKLQESHEDQREKEEN 554
Query: 69 LERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETRDRKLT- 127
+++ V +L+ N L N+ + L+E + + + ++ L EE+ +MK+ +E + + +
Sbjct: 555 IKQIVEHLEEANGQLRNELESLREKMAKKGEEVKSKLDESEENLSNMKKQVENKTKCIEE 614
Query: 128 ------VLHEKINSHLTLFDSIEKEAFSIKQVVDNVE-----CVPYLQKTLSAKDVVIQN 176
VL +K+ + S E + ++ ++N+ V +K + AK V N
Sbjct: 615 LQQENKVLKKKMAAESKKTSSYEGKVNKLQLEMENMNKQHKATVDIYEKEIEAKGVTENN 674
Query: 177 LISEKEALHLEVGKLGIILQRIQD 200
L+ E E + L + I QR D
Sbjct: 675 LLEEVEKMRLLADE-ATIAQRETD 697
>UNIPROTKB|F1MU39 [details] [associations]
symbol:F1MU39 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0003774 "motor activity" evidence=IEA] InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00650000092896
InterPro:IPR015650 PANTHER:PTHR13140:SF22 OMA:IIQYFAT
EMBL:DAAA02001249 EMBL:DAAA02001250 EMBL:DAAA02001251
EMBL:DAAA02001252 IPI:IPI01004093 Ensembl:ENSBTAT00000032372
Uniprot:F1MU39
Length = 1947
Score = 122 (48.0 bits), Expect = 0.00082, P = 0.00082
Identities = 58/218 (26%), Positives = 104/218 (47%)
Query: 33 EIHLLVQKQKRNEEEYSRNLKE----LQSELASTNELCQKLERK-VSYLQNDNALLENKQ 87
EI LV+ +E LKE LQ L + ++L+ K VS LQ N LL Q
Sbjct: 848 EIKPLVRSAGMGKE--GAGLKEECMQLQKALEKSESQREELKSKQVSLLQEKNDLLLQLQ 905
Query: 88 KELKETINRLLQYRENFLSAYEESTCDMKRAIETRDRKLTVLHEKINSHLTLF-DSIEKE 146
E +ET+ + + E + + + +K A+ R + E+INS LT +E E
Sbjct: 906 AE-RETLANVEEQCELLIKSKIQLEASVK-ALSARVEE----EEEINSKLTARGQKLEDE 959
Query: 147 AFSIKQVVDNVECV-PYLQKTLSAKDVVIQNLISEKEALHLEVGKLGIILQRIQDA---- 201
+K+ +D++E + QK A ++ ++NL+ E E+L+ +V KL + Q+
Sbjct: 960 CSELKKEIDDLETLLAKSQKEKHATELKVKNLLEEVESLNEDVSKLHRAARAAQETHQQT 1019
Query: 202 IATMNQEDNNAFHTA----LMLKENCNDI-GTVNEDTR 234
+ + E+ HT L L++ N++ G + ++++
Sbjct: 1020 LEDLRNEEEKV-HTLSKAKLTLEQRVNELEGALEQESK 1056
>MGI|MGI:1289308 [details] [associations]
symbol:Tax1bp1 "Tax1 (human T cell leukemia virus type I)
binding protein 1" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019900 "kinase
binding" evidence=IPI] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0043130 "ubiquitin binding" evidence=NAS] InterPro:IPR015880
SMART:SM00355 MGI:MGI:1289308 GO:GO:0006915 GO:GO:0008270
GO:GO:0005622 GO:GO:0032088 GO:GO:0043130 InterPro:IPR012852
Pfam:PF07888 GeneTree:ENSGT00530000063216 CTD:8887 eggNOG:NOG135564
HOGENOM:HOG000252947 HOVERGEN:HBG053034 OMA:MEGQNSQ
OrthoDB:EOG4JDH65 ChiTaRS:TAX1BP1 EMBL:AK004574 EMBL:AK008528
EMBL:AK146076 EMBL:BC014798 IPI:IPI00321802 RefSeq:NP_080092.2
UniGene:Mm.389757 ProteinModelPortal:Q3UKC1 IntAct:Q3UKC1
STRING:Q3UKC1 PhosphoSite:Q3UKC1 PaxDb:Q3UKC1 PRIDE:Q3UKC1
Ensembl:ENSMUST00000080723 GeneID:52440 KEGG:mmu:52440
UCSC:uc009byz.2 InParanoid:Q3UKC1 NextBio:308956 Bgee:Q3UKC1
Genevestigator:Q3UKC1 GermOnline:ENSMUSG00000004535 Uniprot:Q3UKC1
Length = 814
Score = 118 (46.6 bits), Expect = 0.00083, P = 0.00083
Identities = 53/244 (21%), Positives = 107/244 (43%)
Query: 9 FKFQLQALIAETRHLKEKENS----ATEEIHLL---VQKQKRNEEEYSRNLKELQSELAS 61
F+F+ + + E ++++ NS T + LL ++K + +EE + + L+ E A
Sbjct: 118 FQFRAASPVEELLTMEDEGNSDMLVVTTKAGLLELKIEKTLKEKEELLKLIAVLEKETAQ 177
Query: 62 TNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIET 121
E ++ER++S + L+ +QK L E L E F+ Y ++T +++ E
Sbjct: 178 LREQVGRMERELSQEKGRCEQLQAEQKGLLEVSQSLRVENEEFMKRYSDATAKVQQLEED 237
Query: 122 RDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKT------LSAKDVVIQ 175
++V H+ I L DS++ + + + +EC +K + K+ I+
Sbjct: 238 I---VSVTHKAIEKETDL-DSLKDKLRKAQHEREQLECQLQTEKDEKELYKVHLKNTEIE 293
Query: 176 N--LISEKEALHLEVGKLGIILQRIQDAIATMNQ---EDNNAFHTALMLKENCNDIGTVN 230
N L+SE + L G ++ ++ I+ + + N + L+ N D +
Sbjct: 294 NTKLVSEIQTLKNLDGNKESMITHFKEEISKLQSCLADKENLYRALLLTTSNKEDTLFLK 353
Query: 231 EDTR 234
E R
Sbjct: 354 EQLR 357
>UNIPROTKB|Q4V328 [details] [associations]
symbol:GRIPAP1 "GRIP1-associated protein 1" species:9606
"Homo sapiens" [GO:0005769 "early endosome" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] GO:GO:0005769 EMBL:BX640704 EMBL:BX647804
EMBL:BX530088 EMBL:AF207550 EMBL:BC001522 EMBL:BC101544
EMBL:BC101546 EMBL:AB032993 EMBL:AJ297364 IPI:IPI00414215
IPI:IPI00423384 IPI:IPI00607628 IPI:IPI00873904 RefSeq:NP_064522.3
RefSeq:NP_997555.1 UniGene:Hs.109929 ProteinModelPortal:Q4V328
DIP:DIP-47299N IntAct:Q4V328 MINT:MINT-1395880 STRING:Q4V328
PhosphoSite:Q4V328 DMDM:74753569 PaxDb:Q4V328 PRIDE:Q4V328
DNASU:56850 Ensembl:ENST00000376423 Ensembl:ENST00000376425
Ensembl:ENST00000376441 GeneID:56850 KEGG:hsa:56850 UCSC:uc004dly.1
UCSC:uc004dlz.3 UCSC:uc004dma.3 CTD:56850 GeneCards:GC0XM048830
HGNC:HGNC:18706 HPA:HPA000282 HPA:HPA000615 MIM:300408
neXtProt:NX_Q4V328 PharmGKB:PA38650 eggNOG:NOG135471
HOVERGEN:HBG080243 OMA:KHLEARA GenomeRNAi:56850 NextBio:62252
PMAP-CutDB:Q4V328 ArrayExpress:Q4V328 Bgee:Q4V328
Genevestigator:Q4V328 GermOnline:ENSG00000068400 InterPro:IPR026204
PANTHER:PTHR18978 Uniprot:Q4V328
Length = 841
Score = 118 (46.6 bits), Expect = 0.00086, P = 0.00086
Identities = 69/280 (24%), Positives = 126/280 (45%)
Query: 1 MELLR-LSKFKFQLQALIAETRHLKEKENSATE---EIHLLVQKQKRNEEEYSRNLKELQ 56
ME L+ S+ K +L A+ RH KE E+ L + +KR EEE ++E +
Sbjct: 438 METLQEKSQHKEELGAV--RLRHEKEVLGVRARYERELRELHEDKKRQEEELRGQIREEK 495
Query: 57 S---ELASTNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLS-AYEEST 112
+ EL + + ++L+ +V + E + KE +E++ + Q +E L E+
Sbjct: 496 ARTRELETLQQTVEELQAQVHSMDGAKGWFERRLKEAEESLQQQQQEQEEALKQCREQHA 555
Query: 113 CDMK-RAIETRDRK--LTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLSA 169
++K + E +D + L E+ + HL S+++E +K VD L+K SA
Sbjct: 556 AELKGKEEELQDVRDQLEQAQEERDCHLKTISSLKQE---VKDTVDGQRI---LEKKGSA 609
Query: 170 KDVVIQNLISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTV 229
+++L K LHLE + + +R+QD + N + + L+L E + T
Sbjct: 610 ---ALKDL---KRQLHLERKRADKLQERLQDILT--NSKSRSGLEE-LVLSEMNSPSRTQ 660
Query: 230 NEDTRWLDRVKDANYNGGERSPSKASSLTAPENRASPLCQ 269
D+ + +Y R ++S++ A +SP Q
Sbjct: 661 TGDS---SSISSFSYREILRE-KESSAVPARSLSSSPQAQ 696
>UNIPROTKB|F1PVV7 [details] [associations]
symbol:MYH10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016459 "myosin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051015 "actin filament
binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005524 GO:GO:0003774
GO:GO:0016459 GeneTree:ENSGT00650000092896 OMA:DKNVHEL
SUPFAM:SSF50084 EMBL:AAEX03003644 EMBL:AAEX03003645
Ensembl:ENSCAFT00000027478 Uniprot:F1PVV7
Length = 2046
Score = 122 (48.0 bits), Expect = 0.00087, P = 0.00087
Identities = 54/225 (24%), Positives = 103/225 (45%)
Query: 13 LQALIAETRHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTNELCQKLERK 72
LQ + AE+ H ++K ++ +E+H V + R E + +LQ+EL + + L ++ E+K
Sbjct: 1313 LQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKANKLQNELDNVSSLLEEAEKK 1372
Query: 73 VSYLQNDNALLENK--------QKELKETIN---RLLQYRENFLSAYEESTCDMKRAIET 121
D A LE++ Q+E ++ +N R+ Q E S E+ + + A +
Sbjct: 1373 GIKFAKDAASLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQE-EEEEARKN 1431
Query: 122 RDRKLTVLHEKINSHLTLFD----SIEKEAFSIKQVVDNVECVPYLQKTLSAKDVVIQNL 177
++++ VL ++ D +IE + K+++ +VE L + L K + L
Sbjct: 1432 LEKQVLVLQSQLADTKKKVDDDLGTIESLEEARKKLLKDVEA---LGQRLEEKALAYDKL 1488
Query: 178 ISEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKEN 222
K L E+ L + L Q IA+ ++ F L ++N
Sbjct: 1489 EKTKNRLQQELDDLTVDLDH-QRQIASNLEKKQKKFDQLLAEEKN 1532
>UNIPROTKB|F1N8D3 [details] [associations]
symbol:Gga.11048 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0016021 Gene3D:2.60.200.20 SUPFAM:SSF49879
OMA:RTSKQKC GeneTree:ENSGT00530000063197 EMBL:AADN02014024
IPI:IPI00822469 Ensembl:ENSGALT00000036257 ArrayExpress:F1N8D3
Uniprot:F1N8D3
Length = 848
Score = 118 (46.6 bits), Expect = 0.00087, P = 0.00087
Identities = 76/312 (24%), Positives = 147/312 (47%)
Query: 2 ELLRLSKFK-FQLQALIAETRHL-KEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSEL 59
EL R SK K F+LQAL+ E R + + + ++I++L + +R +E+ +E +SE+
Sbjct: 532 ELARTSKQKCFELQALLEEERRAYRVQVEESNKQINVLQAQLQRLQEDIENLREEKESEI 591
Query: 60 AST-NELCQKLERKVSYLQ-NDNALLENK------QKELKETINRLLQYRENFLSAYEES 111
+ST NEL +S Q + A E Q+EL+ L ++R++ S YE+
Sbjct: 592 SSTRNELVSAQNEILSLQQVAEKAASERDTDISALQEELQTVRAELERWRKD-ASDYEKE 650
Query: 112 TCDMKRAIETRDRKLTVLHEKINSHLTLFDSIEKEAFSIKQVVDNVECVPYLQKTLS-AK 170
++ + + R ++ H++ + L +EK + V ECV ++ S A
Sbjct: 651 IVSLQASFQLRCQQCEEQHKEEATRLK--GELEK--LKAEWSVLEAECVTLRKENTSLAS 706
Query: 171 DVVIQNL---ISEKEALHL--EVGKLGIILQRIQDAIATM---NQEDNNAFHTALMLKEN 222
++ Q S+K++L L + L + + ++D + ++ +Q+D + + L E+
Sbjct: 707 ELQRQEKELSSSQKQSLALTSNISVLEMSRKELEDQMGSLREKHQQDAASLKSQLSEAES 766
Query: 223 -CNDIGTVNEDTRW-LDRVKDANYNGGERSPSKASSLTAPENRASPLCQKHIALGSQFRE 280
D+ E T+ L +K A Y E + + S+T + C++++ L Q +
Sbjct: 767 QAKDVQKEYERTQTVLSELK-AKY---EMAEQEKQSITEELKQ----CKENLKL-LQEKG 817
Query: 281 NNNFSSCVPELA 292
NN +P +A
Sbjct: 818 NNRQWPWMPVMA 829
>UNIPROTKB|O97237 [details] [associations]
symbol:PFC0235w "GRIP and coiled-coil domain-containing
protein PFC0235w" species:36329 "Plasmodium falciparum 3D7"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000237
PROSITE:PS50913 EMBL:AL844502 GO:GO:0000042 RefSeq:XP_001351128.1
HSSP:P68261 ProteinModelPortal:O97237 IntAct:O97237
MINT:MINT-1588708 EnsemblProtists:PFC0235w:mRNA GeneID:814370
KEGG:pfa:PFC0235w EuPathDB:PlasmoDB:PF3D7_0305200 eggNOG:NOG275039
OMA:INDYDNI ProtClustDB:CLSZ2514773 Uniprot:O97237
Length = 1139
Score = 119 (46.9 bits), Expect = 0.00096, P = 0.00096
Identities = 66/277 (23%), Positives = 120/277 (43%)
Query: 8 KFKFQLQALIAET----RHLKEKENSATEEIHLLVQKQKRNEEEYSRNLKELQSELASTN 63
++K ++ +LI ET ++++EKEN +E++ + K K Y + + +
Sbjct: 774 EYKKKVTSLINETNYNYKNIEEKENEI-KELNNTLNKYKEEMNNYKEEIIVINEKYKLLE 832
Query: 64 -ELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDMKRAIETR 122
ELC+ E+ + QN + + K+K LKE I +Y+E + ++ DMK + +
Sbjct: 833 IELCK--EKNIRDQQNVG-ISDLKKKMLKEKIELEKKYKEQYEKETQQKINDMKIIFDNK 889
Query: 123 DRKLT-----VLHEKINSHLTLFDSIEKEAFSIKQVV----DNVECVPYLQKTLSAKDVV 173
++ L +LH KI LT + + + Q+ DN+ +QK + K +
Sbjct: 890 EKILQDQIDDLLH-KIEK-LTFSNDEKTKTIENLQIYMDNDDNIMNQEGIQK--NEKKQI 945
Query: 174 IQNLIS--EKEAL-HLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVN 230
I N I+ EK+ L ++ + L I + E N + L KE N +N
Sbjct: 946 IDNPINTDEKDLLNYIPDNHINSDLNHINSNVENDYVEKRNKNNVHLSKKET-NYQHNIN 1004
Query: 231 EDTRWLDRVKDANYNGGERSPSKASSLTAPENRASPL 267
E D + N N + K S+ + N + P+
Sbjct: 1005 EQEN--DNNNNNNNNNNNNNVEKLKSINST-NTSIPI 1038
>UNIPROTKB|Q8NB25 [details] [associations]
symbol:FAM184A "Protein FAM184A" species:9606 "Homo
sapiens" [GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:CH471051 EMBL:BX538186 EMBL:AL137009
EMBL:AL132874 EMBL:AL365275 EMBL:AK024004 EMBL:AK091682
EMBL:BC009055 EMBL:AL136767 IPI:IPI00647504 IPI:IPI00746850
IPI:IPI00874044 IPI:IPI00914049 RefSeq:NP_001093881.1
RefSeq:NP_078857.5 UniGene:Hs.443789 ProteinModelPortal:Q8NB25
STRING:Q8NB25 PhosphoSite:Q8NB25 DMDM:209572754 PaxDb:Q8NB25
PRIDE:Q8NB25 DNASU:79632 Ensembl:ENST00000338891
Ensembl:ENST00000352896 Ensembl:ENST00000521531 GeneID:79632
KEGG:hsa:79632 UCSC:uc003pyj.3 UCSC:uc003pyl.4 CTD:79632
GeneCards:GC06M119280 HGNC:HGNC:20991 HPA:HPA034571
neXtProt:NX_Q8NB25 PharmGKB:PA164719768 eggNOG:NOG138283
HOGENOM:HOG000090031 HOVERGEN:HBG050909 InParanoid:Q8NB25
OMA:RQQHEET OrthoDB:EOG4ZGPBM ChiTaRS:FAM184A GenomeRNAi:79632
NextBio:68735 ArrayExpress:Q8NB25 Bgee:Q8NB25 CleanEx:HS_FAM184A
Genevestigator:Q8NB25 GermOnline:ENSG00000111879 Uniprot:Q8NB25
Length = 1140
Score = 119 (46.9 bits), Expect = 0.00096, P = 0.00096
Identities = 47/199 (23%), Positives = 96/199 (48%)
Query: 7 SKFKFQLQALIAETRHLKEKENSATE-EIHLLVQKQKRNEEEYSRNLKELQSELASTNEL 65
S+ Q A I RH +E +A + E+ + +R +E+ + +LQ EL
Sbjct: 823 SELNHQHAAAIDLLRHNHHQELAAAKMELERSIDISRRQSKEHICRITDLQEELRHREHH 882
Query: 66 CQKLERKVSYL-QNDNAL---LENKQKEL---KETINRLLQYRENFLSAYEESTCDMKRA 118
+L+++V +L +N +AL LE K KE+ + N+ ++ E L+ E D+ A
Sbjct: 883 ISELDKEVQHLHENISALTKELEFKGKEILRIRSESNQQIRLHEQDLNKRLEKELDVMTA 942
Query: 119 IETRDR--------KLTVLHEKINSHLTL-FDSIEKEAFSIKQVVDNVECVPYLQKTLSA 169
R++ K L ++IN+ L + + +E++ + ++++ + L+ L+
Sbjct: 943 DHLREKNIMRADFNKTNELLKEINAALQVSLEEMEEKYLMRESKPEDIQMITELKAMLTE 1002
Query: 170 KDVVIQNLISEKEALHLEV 188
+D +I+ LI + + LE+
Sbjct: 1003 RDQIIKKLIEDNKFYQLEL 1021
>UNIPROTKB|A6QR15 [details] [associations]
symbol:LOC535277 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0031941 "filamentous actin" evidence=IEA]
[GO:0030863 "cortical cytoskeleton" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0002102 "podosome"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA]
GO:GO:0006979 GO:GO:0030863 GO:GO:0031941 GO:GO:0001725
GO:GO:0002102 EMBL:DAAA02019108 InterPro:IPR000533 Pfam:PF00261
PRINTS:PR00194 PROSITE:PS00326 eggNOG:NOG304012
HOGENOM:HOG000231521 HOVERGEN:HBG107404 OrthoDB:EOG4TXBSM
GeneTree:ENSGT00550000074494 CTD:7171 KO:K10375 OMA:EKCKQVE
EMBL:BC150074 IPI:IPI00727017 RefSeq:NP_001094632.1 UniGene:Bt.9589
SMR:A6QR15 STRING:A6QR15 Ensembl:ENSBTAT00000005982 GeneID:535277
KEGG:bta:535277 InParanoid:A6QR15 NextBio:20876681 Uniprot:A6QR15
Length = 284
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 1 MELLRLSKFKFQLQALIAET--RHLKEKENSATEEIHLLVQKQKRNEEE---YSRNLKEL 55
M++L+L K +A AE+ + +EK EE+ L +K K E+E YS NLK+
Sbjct: 8 MQMLKLDKENAIDRAEQAESDKKAAEEKCKQVEEELTHLQKKLKETEDELDKYSENLKDA 67
Query: 56 QSELASTNELCQKLERKVSYLQNDNALLENKQKELKETINRLLQYRENFLSAYEESTCDM 115
Q +L T + E V+ L L+E + +E + LQ E A +ES M
Sbjct: 68 QEKLELTEKKASDAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGM 127
Query: 116 KRAIETRDRK 125
K IE R K
Sbjct: 128 K-VIENRAMK 136
>UNIPROTKB|E1C6R7 [details] [associations]
symbol:Gga.26929 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0005739 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00530000063369 OMA:AEYIHKA EMBL:AADN02052092
EMBL:AADN02052093 EMBL:AADN02052094 EMBL:AADN02052095
EMBL:AADN02052096 EMBL:AADN02052097 EMBL:AADN02052098
EMBL:AADN02052099 EMBL:AADN02052100 EMBL:AADN02052101
EMBL:AADN02052102 EMBL:AADN02052103 EMBL:AADN02052104
IPI:IPI00578529 ProteinModelPortal:E1C6R7
Ensembl:ENSGALT00000005305 Uniprot:E1C6R7
Length = 947
Score = 118 (46.6 bits), Expect = 0.0010, P = 0.0010
Identities = 54/248 (21%), Positives = 108/248 (43%)
Query: 12 QLQALIAETRHLKEKENSAT--EEIHLLVQKQKRNEEEYSRNLKELQSELASTNELCQKL 69
+LQ + HL+ S + +H ++ + R E S+ KE Q+EL +
Sbjct: 577 RLQDKLTNQTHLESSAESGEMKDAMHRMIDELNRQLSELSQLYKEAQAELEDYRKRKTLD 636
Query: 70 ERKVSYLQND-NALLENKQKELK-ETINRLLQYRENFLSAYEESTCDMKRAIET-RDRKL 126
+ V Y+ D + L LK + N LL+ + + +E+ ++K+ ++T + L
Sbjct: 637 DIAVDYIPRDEHEKLMQVTNSLKYKAENELLEMKSQYTKVLDEAE-ELKQMLDTQKQNSL 695
Query: 127 TVL-HEKI-NSHLTLFDSIEKEAFSIKQVVDNVEC-VPYLQKTL-----SAKDVVIQNLI 178
+ H+++ N+ + +E+E +K+++ N E V LQK L + + ++
Sbjct: 696 PIAEHQQVMNALRSTVKEMEEEINELKELLTNKESEVRNLQKELLEEKAAINEAMVPRAA 755
Query: 179 SEKEALHLEVGKLGIILQRIQDAIATMNQEDNNAFHTALMLKENCNDIGTVNEDTRWLDR 238
EK LE G++ I+ +++D I +E N + L+ + E L
Sbjct: 756 YEKLQSSLE-GEVSILSSKLKDVI----KEKENVSLDVMQLRSEVLHLKEEKEGMHNLLE 810
Query: 239 VKDANYNG 246
K+ +G
Sbjct: 811 AKEREVSG 818
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.127 0.346 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 358 343 0.00096 116 3 11 23 0.44 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 602 (64 KB)
Total size of DFA: 210 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.45u 0.16s 44.61t Elapsed: 00:00:02
Total cpu time: 44.46u 0.16s 44.62t Elapsed: 00:00:02
Start: Sat May 11 06:44:27 2013 End: Sat May 11 06:44:29 2013