BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040673
(291 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The
Xyloglucan Nonasaccharide Xllg.
pdb|1UMZ|B Chain B, Xyloglucan Endotransglycosylase In Complex With The
Xyloglucan Nonasaccharide Xllg.
pdb|1UN1|A Chain A, Xyloglucan Endotransglycosylase Native Structure.
pdb|1UN1|B Chain B, Xyloglucan Endotransglycosylase Native Structure
Length = 278
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 173/268 (64%), Gaps = 4/268 (1%)
Query: 23 VIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGN 82
V F ++ W H G ++ L LD+ +G+G QSK S+LFG M +KLVPG+
Sbjct: 13 VDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGD 72
Query: 83 SAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTAD 142
SAGTVTA+YL+S S+HDEIDFEFLGN +GQPYI+ TN++T GKGDREQ+ YLWFDPT +
Sbjct: 73 SAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKE 132
Query: 143 YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLD 202
+H Y++ WN +V+ VD VPIRVF+N + G+ +P Q M+ + S+WNAD+WATRGGL+
Sbjct: 133 FHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLE 192
Query: 203 KIDWSNAPFIXXXXXXXXXXCKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWV 262
K DWS APFI C+ V CAT+ WW + L + + +L WV
Sbjct: 193 KTDWSKAPFIASYRSFHIDGCE--ASVEAKFCATQG-ARWWDQKEFQDLDAFQYRRLSWV 249
Query: 263 REKYMIYNYCKDTKRFNGKMAPECSKPQ 290
R+KY IYNYC D R+ M PEC + +
Sbjct: 250 RQKYTIYNYCTDRSRYPS-MPPECKRDR 276
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg,
A Xyloglucan Derived Oligosaccharide
pdb|2VH9|B Chain B, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg,
A Xyloglucan Derived Oligosaccharide
Length = 290
Score = 180 bits (456), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 147/255 (57%), Gaps = 18/255 (7%)
Query: 35 WGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTS 94
WG H + + L + LD +SGSG +S + G IKL G +AG +T++YL++
Sbjct: 51 WGPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFYLSN 108
Query: 95 S---GSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWN 151
+ +HDEID EFLG + G+PY + TN++ +G GDRE + +LWFDPT DYHNY I+W
Sbjct: 109 NQDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDREMRIHLWFDPTQDYHNYAIYWT 168
Query: 152 PTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPF 211
P+E++++VD VPIR R K +P + + + S+W+A +WAT G K D+ PF
Sbjct: 169 PSEIIFFVDDVPIR--RYPRKSDATFPLRP-LWVYGSVWDASSWATENGKYKADYRYQPF 225
Query: 212 IXXXXXXXXXXCKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKYMIYNY 271
+ C ++ ++ P + SP Y QLS ++ ++WV++ YM+YNY
Sbjct: 226 VGKYEDFKLGSC------TVEAASSCNPAS--VSP-YGQLSQQQVAAMEWVQKNYMVYNY 276
Query: 272 CKDTKRFNGKMAPEC 286
C D R + + PEC
Sbjct: 277 CDDPTR-DHTLTPEC 290
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant
Xyloglucanase Isoform Nxg1-Delta-Yniig
pdb|2UWB|B Chain B, Crystal Structure Of The Nasturtium Seedling Mutant
Xyloglucanase Isoform Nxg1-Delta-Yniig
Length = 267
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 147/255 (57%), Gaps = 18/255 (7%)
Query: 35 WGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTS 94
WG H + + L + LD +SGSG +S + G IKL G +AG +T++YL++
Sbjct: 28 WGPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFYLSN 85
Query: 95 SGS---QHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWN 151
+ +HDEID EFLG + G+PY + TN++ +G GDRE + +LWFDPT DYHNY I+W
Sbjct: 86 NQDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDREMRIHLWFDPTQDYHNYAIYWT 145
Query: 152 PTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPF 211
P+E++++VD VPIR R K +P + + + S+W+A +WAT G K D+ PF
Sbjct: 146 PSEIIFFVDDVPIR--RYPRKSDATFPLRP-LWVYGSVWDASSWATENGKYKADYRYQPF 202
Query: 212 IXXXXXXXXXXCKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKYMIYNY 271
+ C ++ ++ P + SP Y QLS ++ ++WV++ YM+YNY
Sbjct: 203 VGKYEDFKLGSC------TVEAASSCNPAS--VSP-YGQLSQQQVAAMEWVQKNYMVYNY 253
Query: 272 CKDTKRFNGKMAPEC 286
C D R + + PEC
Sbjct: 254 CDDPTR-DHTLTPEC 267
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase
Isoform Nxg2
pdb|2UWC|B Chain B, Crystal Structure Of Nasturtium Xyloglucan Hydrolase
Isoform Nxg2
Length = 271
Score = 174 bits (440), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 147/260 (56%), Gaps = 23/260 (8%)
Query: 35 WGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTS 94
WG H + + L + LD +SGSG +S + G IKL G +AG +T++YL++
Sbjct: 27 WGPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFYLSN 84
Query: 95 SGS---QHDEIDFEFLGNVSGQPYIIHTNIYTQGKGD-----REQQFYLWFDPTADYHNY 146
+ +HDEID EFLG + G+PY + TN++ +G GD RE + +LWFDPT DYHNY
Sbjct: 85 NQDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGRELRIHLWFDPTQDYHNY 144
Query: 147 TIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDW 206
I+W P+E++++VD VPIR R K +P + M + S+W+A +WAT G K D+
Sbjct: 145 AIYWTPSEIIFFVDDVPIR--RYPRKSDATFPLRP-MWVYGSVWDASSWATENGKYKADY 201
Query: 207 SNAPFIXXXXXXXXXXCKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKY 266
PF+ C ++ ++ P + SP Y QLS ++ ++WV++ Y
Sbjct: 202 RYQPFVGKYEDFKLGSC------TVEAASSCNPAS--VSP-YGQLSQQQVAAMEWVQKNY 252
Query: 267 MIYNYCKDTKRFNGKMAPEC 286
M+YNYC D R + + PEC
Sbjct: 253 MVYNYCDDPTR-DHTLTPEC 271
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase
Isoform Nxg1
pdb|2UWA|B Chain B, Crystal Structure Of The Nasturtium Seedling Xyloglucanase
Isoform Nxg1
pdb|2UWA|C Chain C, Crystal Structure Of The Nasturtium Seedling Xyloglucanase
Isoform Nxg1
Length = 274
Score = 173 bits (439), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 147/260 (56%), Gaps = 23/260 (8%)
Query: 35 WGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTS 94
WG H + + L + LD +SGSG +S + G IKL G +AG +T++YL++
Sbjct: 30 WGPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFYLSN 87
Query: 95 SGS---QHDEIDFEFLGNVSGQPYIIHTNIYTQGKGD-----REQQFYLWFDPTADYHNY 146
+ +HDEID EFLG + G+PY + TN++ +G GD RE + +LWFDPT DYHNY
Sbjct: 88 NQDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGREMRIHLWFDPTQDYHNY 147
Query: 147 TIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDW 206
I+W P+E++++VD VPIR R K +P + + + S+W+A +WAT G K D+
Sbjct: 148 AIYWTPSEIIFFVDDVPIR--RYPRKSDATFPLRP-LWVYGSVWDASSWATENGKYKADY 204
Query: 207 SNAPFIXXXXXXXXXXCKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKY 266
PF+ C ++ ++ P + SP Y QLS ++ ++WV++ Y
Sbjct: 205 RYQPFVGKYEDFKLGSC------TVEAASSCNPAS--VSP-YGQLSQQQVAAMEWVQKNY 255
Query: 267 MIYNYCKDTKRFNGKMAPEC 286
M+YNYC D R + + PEC
Sbjct: 256 MVYNYCDDPTR-DHTLTPEC 274
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase
Protein From Bacillus Licheniformis
pdb|3D6E|B Chain B, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase
Protein From Bacillus Licheniformis
Length = 201
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 14 TAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSS-----GSGAQSKISFL 68
T +F++ F ++ ++ W H ++ GE + L L S G G QS ++
Sbjct: 2 TGGSFYEPF--NNYNTGLWQKWAFDHVSMTSLGE-MRLSLTSPSYNKFDGGGNQSVQTYG 58
Query: 69 FGSIEMLIKLVPGNSAGTVTAYYLTSS---GSQHDEIDFEFLGNVSGQPYIIHTNIYTQG 125
+G E+ +K P + G V+A+Y ++ G+ DEID EFLG + + + N YT G
Sbjct: 59 YGLYEVNMK--PAKNVGIVSAFYTSTGPTDGTPWDEIDIEFLGKDTTK---VQFNYYTNG 113
Query: 126 KGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVD 160
G+ E+ L FD YH Y W P + WYVD
Sbjct: 114 VGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVD 148
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase
(Lichenase) Derived From A Mouse Hindgut Metagenome
pdb|3I4I|B Chain B, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase
(Lichenase) Derived From A Mouse Hindgut Metagenome
Length = 234
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 35 WGAHHSAIVGNGEDLNLVLDQSSGS----GAQSKISFLFGSIEMLIKLVPGNSAGTVTAY 90
W A++ + +L++ D S S GA+ + FG +++ P + G V+++
Sbjct: 52 WRAYNIELKDGILNLSITDDMPSSSKPYAGAEYRTRDKFGYGLYQVRMKPAKNPGIVSSF 111
Query: 91 YLTSSGSQH----DEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNY 146
+ T +G H DEID EFLG + + + N YT G+ E + L FD + D+H Y
Sbjct: 112 F-TYTGPVHGTPWDEIDIEFLGKDTTK---VQFNYYTNSAGNHEYIYDLRFDASEDFHIY 167
Query: 147 TIHWNPTEVVWYVDSVPIRVFRNYE 171
+W P + W VD V+R Y+
Sbjct: 168 AFNWQPNYIAWLVDGE--EVYRAYD 190
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of
Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase
pdb|1MAC|B Chain B, Crystal Structure And Site-Directed Mutagenesis Of
Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase
Length = 212
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSS---GSQHDEIDFEFLGNVSGQPYII 117
A+ + + ++G + + P + G V++++ + G+Q DEID EFLG + + +
Sbjct: 60 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 116
Query: 118 HTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSV 162
N YT G G E+ L FD + +H Y W P + WYVD V
Sbjct: 117 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV 161
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus
(1-3,1-4)- Beta-Glucanase
pdb|1GLH|A Chain A, Cation Binding To A Bacillus (1,3-1,4)-Beta-Glucanase.
Geometry, Affinity And Effect On Protein Stability
pdb|2AYH|A Chain A, Crystal And Molecular Structure At 1.6 Angstroms
Resolution Of The Hybrid Bacillus
Endo-1,3-1,4-Beta-D-Glucan 4- Glucanohydrolase H(A16-M)
Length = 214
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSS---GSQHDEIDFEFLGNVSGQPYII 117
A+ + + ++G + + P + G V++++ + G+Q DEID EFLG + + +
Sbjct: 62 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 118
Query: 118 HTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSV 162
N YT G G E+ L FD + +H Y W P + WYVD V
Sbjct: 119 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV 163
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted
Jellyroll Protein Shown By Crystal Structure Analysis
Length = 208
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSS---GSQHDEIDFEFLGNVSGQPYII 117
A+ + + ++G + + P + G V++++ + G+Q DEID EFLG + + +
Sbjct: 4 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 60
Query: 118 HTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSV 162
N YT G G E+ L FD + +H Y W P + WYVD V
Sbjct: 61 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV 105
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted
Jellyroll Protein Shown By Crystal Structure Analysis
Length = 214
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSS---GSQHDEIDFEFLGNVSGQPYII 117
A+ + + ++G + + P + G V++++ + G+Q DEID EFLG + + +
Sbjct: 4 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 60
Query: 118 HTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSV 162
N YT G G E+ L FD + +H Y W P + WYVD V
Sbjct: 61 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV 105
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1
pdb|1AXK|B Chain B, Engineered Bacillus Bifunctional Enzyme Gluxyn-1
Length = 394
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSS---GSQHDEIDFEFLGNVSGQPYII 117
A+ + + ++G + + P + G V++++ + G+Q DEID EFLG + + +
Sbjct: 4 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 60
Query: 118 HTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSV 162
N YT G G E+ L FD + +H Y W P + WYVD V
Sbjct: 61 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV 105
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From
Bacillus Subtilis (Strain 168)
Length = 238
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 76 IKLVPGNSAGTVTAYYL---TSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQ 132
+++ P + G V++++ + G+ DEID EFLG + + + N YT G G+ E+
Sbjct: 101 VRMKPAKNTGIVSSFFTYTGPTDGTPWDEIDIEFLGKDTTK---VQFNYYTNGAGNHEKI 157
Query: 133 FYLWFDPTADYHNYTIHWNPTEVVWYVD 160
L FD YH Y W P + WYVD
Sbjct: 158 VDLGFDAANAYHTYAFDWQPNSIKWYVD 185
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase
Length = 214
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 76 IKLVPGNSAGTVTAYYL---TSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQ 132
+ + P + G V++++ + G+ DEID EFLG + + + N YT G G+ E+
Sbjct: 77 VNMKPAKNVGIVSSFFTYTGPTDGTPWDEIDIEFLGKDTTK---VQFNYYTNGVGNHEKI 133
Query: 133 FYLWFDPTADYHNYTIHWNPTEVVWYVD 160
L FD YH Y W P + WYVD
Sbjct: 134 VNLGFDAANSYHTYAFDWQPNSIKWYVD 161
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered
Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With
Beta-Glucan Tetrasaccharide
pdb|1U0A|B Chain B, Crystal Structure Of The Engineered
Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With
Beta-Glucan Tetrasaccharide
pdb|1U0A|C Chain C, Crystal Structure Of The Engineered
Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With
Beta-Glucan Tetrasaccharide
pdb|1U0A|D Chain D, Crystal Structure Of The Engineered
Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With
Beta-Glucan Tetrasaccharide
Length = 214
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSS---GSQHDEIDFEFLGNVSGQPYII 117
A+ + + ++G + + P + G V++++ + G+Q D+ID +FLG + + +
Sbjct: 62 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDQIDIQFLGKDTTK---V 118
Query: 118 HTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSV 162
N YT G G E+ L FD + +H Y W P + WYVD V
Sbjct: 119 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV 163
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-84
pdb|1AJK|B Chain B, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-84
Length = 214
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 96 GSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEV 155
G+Q DEID EFLG + + + N YT G G E+ L FD + +H Y W P +
Sbjct: 17 GTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYI 73
Query: 156 VWYVDSV 162
WYVD V
Sbjct: 74 KWYVDGV 80
>pdb|3H0O|A Chain A, The Importance Of Ch-Pi Stacking Interactions Between
Carbohydrate And Aromatic Residues In Truncated
Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase
Length = 240
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 24/147 (16%)
Query: 69 FGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHD------EIDFEFLGNVSGQPYIIHTNIY 122
+G E +K+ ++GTV++ +L +GS+ E+D E LG P +NI
Sbjct: 17 YGKFEARMKMAA--ASGTVSSMFLYQNGSEIADGRPWVEVDIEVLGK---NPGSFQSNII 71
Query: 123 TQGKG-DREQQFYLWFDPTAD--YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPN 179
T G + + + P AD +H Y + W P V W VD +R + EG N
Sbjct: 72 TGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVR-----KTEGGQVSN 126
Query: 180 ---KQGMRTHVSIWNADNWATRGGLDK 203
QG+R ++W++++ A G D+
Sbjct: 127 LTGTQGLR--FNLWSSESAAWVGQFDE 151
>pdb|3AXD|A Chain A, The Truncated Fibrobacter Succinogenes
1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form
pdb|3AXD|B Chain B, The Truncated Fibrobacter Succinogenes
1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form
pdb|3AXE|A Chain A, The Truncated Fibrobacter Succinogenes
1,3-1,4-Beta-D-Glucanase V18yW203Y IN COMPLEX WITH
CELLOTETRAOSE (CELLOBIOSE DENSITY WAS Observed)
Length = 249
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 67 FLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHD------EIDFEFLGNVSGQPYIIHTN 120
+ +G E +K+ ++GTV++ +L +GS+ E+D E LG P +N
Sbjct: 18 YQYGKFEARMKMAA--ASGTVSSMFLYQNGSEIADGRPWVEVDIEVLGK---SPGSFQSN 72
Query: 121 IYTQGKG-DREQQFYLWFDPTAD--YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAY 177
I T G + + + P AD +H Y + W P V W VD +R + EG
Sbjct: 73 IITGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVR-----KTEGGQV 127
Query: 178 PN---KQGMRTHVSIWNADNWATRGGLDK 203
N QG+R ++W++++ A G D+
Sbjct: 128 SNLTGTQGLR--FNLWSSESAAWVGQFDE 154
>pdb|2R49|A Chain A, Mutational And Structural Studies Of E85i Reveal The
Flexible Loops Of Fibrobacter Succinogenes
1,3-1,4-beta-d- Glucanaseglucanase
Length = 241
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 24/147 (16%)
Query: 69 FGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHD------EIDFEFLGNVSGQPYIIHTNIY 122
+G E +K+ ++GTV++ +L +GS+ E+D E LG P +NI
Sbjct: 18 YGKFEARMKMAA--ASGTVSSMFLYQNGSEIADGRPWVEVDIEVLGK---NPGSFQSNII 72
Query: 123 TQGKGDREQQF-YLWFDPTAD--YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPN 179
T G ++ + P AD +H Y + W P V W VD +R + EG N
Sbjct: 73 TGKAGAQKTSIKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVR-----KTEGGQVSN 127
Query: 180 ---KQGMRTHVSIWNADNWATRGGLDK 203
QG+R ++W++++ A G D+
Sbjct: 128 LTGTQGLR--FNLWSSESAAWVGQFDE 152
>pdb|3HR9|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-
Glucanase F40i Mutant
Length = 241
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 69 FGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHD------EIDFEFLGNVSGQPYIIHTNIY 122
+G E +K+ ++GTV++ L +GS+ E+D E LG P +NI
Sbjct: 18 YGKFEARMKMAA--ASGTVSSMILYQNGSEIADGRPWVEVDIEVLGK---NPGSFQSNII 72
Query: 123 TQGKG-DREQQFYLWFDPTAD--YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPN 179
T G + + + P AD +H Y + W P V W VD +R + EG N
Sbjct: 73 TGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVR-----KTEGGQVSN 127
Query: 180 ---KQGMRTHVSIWNADNWATRGGLDK 203
QG+R ++W++++ A G D+
Sbjct: 128 LTGTQGLR--FNLWSSESAAWVGQFDE 152
>pdb|1MVE|A Chain A, Crystal Structure Of A Natural Circularly-Permutated
Jellyroll Protein: 1,3-1,4-Beta-D-Glucanase From
Fibrobacter Succinogenes
Length = 243
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 24/147 (16%)
Query: 69 FGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHD------EIDFEFLGNVSGQPYIIHTNIY 122
+G E K ++GTV++ +L +GS+ E+D E LG P +NI
Sbjct: 20 YGKFEARXKXAA--ASGTVSSXFLYQNGSEIADGRPWVEVDIEVLGK---NPGSFQSNII 74
Query: 123 TQGKG-DREQQFYLWFDPTAD--YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPN 179
T G + + + P AD +H Y + W P V W VD +R + EG N
Sbjct: 75 TGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVR-----KTEGGQVSN 129
Query: 180 ---KQGMRTHVSIWNADNWATRGGLDK 203
QG+R ++W++++ A G D+
Sbjct: 130 LTGTQGLR--FNLWSSESAAWVGQFDE 154
>pdb|1ZM1|A Chain A, Crystal Structures Of Complex F. Succinogenes
1,3-1,4-Beta- D-Glucanase And Beta-1,3-1,4-Cellotriose
pdb|1ZM1|B Chain B, Crystal Structures Of Complex F. Succinogenes
1,3-1,4-Beta- D-Glucanase And Beta-1,3-1,4-Cellotriose
Length = 241
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 24/147 (16%)
Query: 69 FGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHD------EIDFEFLGNVSGQPYIIHTNIY 122
+G E K ++GTV++ +L +GS+ E+D E LG P +NI
Sbjct: 17 YGKFEARXKXAA--ASGTVSSXFLYQNGSEIADGRPWVEVDIEVLGK---NPGSFQSNII 71
Query: 123 TQGKG-DREQQFYLWFDPTAD--YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPN 179
T G + + + P AD +H Y + W P V W VD +R + EG N
Sbjct: 72 TGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVR-----KTEGGQVSN 126
Query: 180 ---KQGMRTHVSIWNADNWATRGGLDK 203
QG+R ++W++++ A G D+
Sbjct: 127 LTGTQGLR--FNLWSSESAAWVGQFDE 151
>pdb|2HYK|A Chain A, The Crystal Structure Of An Endo-Beta-1,3-Glucanase From
Alkaliphilic Nocardiopsis Sp.Strain F96
Length = 245
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 39 HSAIVGNGEDLNLVLDQSSGSG-------AQSKISFLFGSIEMLIKLVPGNSAGTVTAYY 91
+SA+ GNG +L + Q + G Q+K+ +G +E I++ G G A++
Sbjct: 51 NSALDGNG-NLVITARQEADGGYTSARLTTQNKVQPQYGRVEASIQIPRGQ--GIWPAFW 107
Query: 92 LTSSGSQH----DEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPT----AD- 142
+ + + D + + + N+ +P+++H +++ G E + P AD
Sbjct: 108 MLGADFPNTPWPDSGEIDIMENIGREPHLVHGSLHGPGYFGGEPLTGSYMHPQGWSFADT 167
Query: 143 YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEG 174
+H + + W P + W VD V + + + + G
Sbjct: 168 FHTFAVDWRPGSITWSVDGVAYQTYTSADTRG 199
>pdb|3ILN|A Chain A, X-Ray Structure Of The Laminarinase From Rhodothermus
Marinus
pdb|3ILN|B Chain B, X-Ray Structure Of The Laminarinase From Rhodothermus
Marinus
Length = 251
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 62 QSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSS----GSQH--DEIDFEFLGNVSGQPY 115
+ K S+ +G E+ +L G GT A ++ GS + D + + +V P
Sbjct: 78 RGKASWTYGRFEIRARLPSGR--GTWPAIWMLPDRQTYGSAYWPDNGEIDIAEHVGFNPD 135
Query: 116 IIHTNIYTQGKG-----DREQQFYLWFDPTA--DYHNYTIHWNPTEVVWYVDS-----VP 163
++H ++T+ R + PTA D+H Y I W P E+ W+VD P
Sbjct: 136 VVHGTVHTKAYNHLLGTQRGGSIRV---PTARTDFHVYAIEWTPEEIRWFVDDSLYYRFP 192
Query: 164 IRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLD 202
N E + +P Q ++I W + G+D
Sbjct: 193 NERLTNPEADWRHWPFDQPFHLIMNIAVGGTWGGQQGVD 231
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-127
pdb|1AJO|B Chain B, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-127
Length = 214
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 127 GDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSV 162
G E+ L FD + +H Y W P + WYVD V
Sbjct: 2 GGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV 37
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 61 AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSS---GSQHDEIDFEFLGNVSGQPYII 117
A+ + + ++G + + P + G V++++ + G+Q DEID EFLG + + +
Sbjct: 150 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 206
Query: 118 HTNIYTQG 125
N YT G
Sbjct: 207 QFNYYTNG 214
>pdb|3ATG|A Chain A, Endo-1,3-Beta-Glucanase From Cellulosimicrobium Cellulans
Length = 256
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 19/113 (16%)
Query: 62 QSKISFLFGSIEMLIKLVPGNS--------AGTVTAYYLTSSGSQHDEIDFEFLGNVSGQ 113
Q K +G IE I++ G G+ SSG EID + NV +
Sbjct: 76 QGKYQPQYGRIEARIQIPRGQGIWPAFWMLGGSFPGTPWPSSG----EIDI--MENVGFE 129
Query: 114 PYIIHTNIYTQGKGDREQQFYLWFDPTA-----DYHNYTIHWNPTEVVWYVDS 161
P+ +H ++ G ++ P +H + + W P E+ W+VD
Sbjct: 130 PHRVHGTVHGPGYSGGSGITGMYQHPQGWSFADTFHTFAVDWKPGEITWFVDG 182
>pdb|2VY0|A Chain A, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From
Pyrococcus Furiosus
pdb|2VY0|B Chain B, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From
Pyrococcus Furiosus
Length = 264
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 72 IEMLIKLVPGNSAGTVTAYYLTSSGSQH------DEIDF-EFLGNVSGQPYIIHTNIYTQ 124
+E IKL G G A+++ S + EID EFLG+ +P IH ++
Sbjct: 104 VEARIKLPKGK--GLWPAFWMLGSNIREVGWPNCGEIDIMEFLGH---EPRTIHGTVHGP 158
Query: 125 GKGDREQQFYLWFDP------TADYHNYTIHWNPTEVVWYVDS 161
G + + P T D+H + I W P ++ WYVD
Sbjct: 159 GYSGSKGITRAYTLPEGVPDFTEDFHVFGIVWYPDKIKWYVDG 201
>pdb|1DYP|A Chain A, 1,3-Alpha-1,4-Beta-D-Galactose-4-Sulfate-3,6-Anhydro-D-
Galactose 4 Galactohydrolase
Length = 271
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 61 AQSKISFLFGSIEMLIK---LVPGNSAG----TVTAYYLTSSGS-QHDEIDFEFLGNVSG 112
A+S+ + +G E IK PG S + LT G Q+ EID L S
Sbjct: 89 AKSRATGNYGYYEARIKGASTFPGVSPAFWXYSTIDRSLTKEGDVQYSEIDVVELTQKSA 148
Query: 113 ---QPYIIHTNIYTQGK------GDREQQ----FYLWFDPTADYHNYTIHWNPTEVVWYV 159
+ +H + GK G Q ++L FDP D+H Y ++ ++ WYV
Sbjct: 149 VRESDHDLHNIVVKNGKPTWXRPGSFPQTNHNGYHLPFDPRNDFHTYGVNVTKDKITWYV 208
Query: 160 D 160
D
Sbjct: 209 D 209
>pdb|1UPS|A Chain A, Glcnac[alpha]1-4gal Releasing Endo-[beta]-Galactosidase
From Clostridium Perfringens
pdb|1UPS|B Chain B, Glcnac[alpha]1-4gal Releasing Endo-[beta]-Galactosidase
From Clostridium Perfringens
Length = 420
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 138 DPTADYHNYTIHWNPTEVVWYVDSVPIRV 166
DPT++YH Y + W PT + +Y D+ +V
Sbjct: 209 DPTSEYHIYAMEWTPTALKFYYDNELFKV 237
>pdb|3AZX|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZX|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZY|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZY|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZY|C Chain C, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZY|D Chain D, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZZ|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Gluconolactone
pdb|3AZZ|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Gluconolactone
pdb|3AZZ|C Chain C, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Gluconolactone
pdb|3AZZ|D Chain D, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Gluconolactone
pdb|3B00|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Cetyltrimethylammonium Bromide
pdb|3B00|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Cetyltrimethylammonium Bromide
pdb|3B00|C Chain C, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Cetyltrimethylammonium Bromide
pdb|3B00|D Chain D, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Cetyltrimethylammonium Bromide
pdb|3B01|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3B01|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3B01|C Chain C, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3B01|D Chain D, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
Length = 272
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 138 DPTADYHNYTIHWNPTEVVWYVDS 161
D + D+H ++I W+ EV WYVD
Sbjct: 173 DFSEDFHIFSIEWDEDEVEWYVDG 196
>pdb|4DFS|A Chain A, Structure Of The Catalytic Domain Of An
Endo-1,3-Beta-Glucanase (Laminarinase) From Thermotoga
Petrophila Rku-1
pdb|4DFS|B Chain B, Structure Of The Catalytic Domain Of An
Endo-1,3-Beta-Glucanase (Laminarinase) From Thermotoga
Petrophila Rku-1
Length = 267
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 138 DPTADYHNYTIHWNPTEVVWYVDS 161
D + D+H ++I W+ EV WYVD
Sbjct: 181 DFSEDFHIFSIEWDEDEVEWYVDG 204
>pdb|2GCU|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At1g53580
pdb|2GCU|B Chain B, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At1g53580
pdb|2GCU|C Chain C, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At1g53580
pdb|2GCU|D Chain D, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At1g53580
Length = 245
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 33 INWGAHHSAIVGNG------EDLNLVLDQSSGSGAQ------SKISFLFGSIEMLIKLVP 80
+N H + G G + V+ ++SGS A K+S G I + ++ P
Sbjct: 58 MNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSI--GDIYLEVRATP 115
Query: 81 GNSAGTVTAYYLTSSGSQHDEIDFEFLGN 109
G++AG VT Y+T G+ + F G+
Sbjct: 116 GHTAGCVT--YVTGEGADQPQPRMAFTGD 142
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,522,141
Number of Sequences: 62578
Number of extensions: 406252
Number of successful extensions: 974
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 921
Number of HSP's gapped (non-prelim): 34
length of query: 291
length of database: 14,973,337
effective HSP length: 98
effective length of query: 193
effective length of database: 8,840,693
effective search space: 1706253749
effective search space used: 1706253749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)