Query 040675
Match_columns 142
No_of_seqs 129 out of 1252
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 10:41:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040675.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040675hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 99.9 2.9E-23 6.2E-28 140.0 12.4 140 1-140 76-227 (231)
2 PRK09481 sspA stringent starva 99.9 1.1E-20 2.4E-25 128.4 11.1 122 1-127 76-205 (211)
3 TIGR00862 O-ClC intracellular 99.8 1.1E-19 2.3E-24 124.8 12.3 137 1-138 76-234 (236)
4 cd03185 GST_C_Tau GST_C family 99.8 2.3E-19 5.1E-24 112.5 11.0 115 20-134 2-125 (126)
5 PRK10542 glutathionine S-trans 99.8 1.7E-19 3.6E-24 121.6 8.1 119 1-125 70-198 (201)
6 cd03184 GST_C_Omega GST_C fami 99.8 1.6E-18 3.6E-23 108.6 9.7 113 21-134 2-123 (124)
7 cd03186 GST_C_SspA GST_N famil 99.8 4.1E-18 8.8E-23 104.1 10.0 99 19-121 1-106 (107)
8 cd03198 GST_C_CLIC GST_C famil 99.8 7.2E-18 1.6E-22 106.2 11.1 104 29-132 11-132 (134)
9 cd03190 GST_C_ECM4_like GST_C 99.8 3.7E-18 8.1E-23 109.3 9.6 117 21-137 4-131 (142)
10 cd03201 GST_C_DHAR GST_C famil 99.8 1.5E-17 3.3E-22 103.7 10.8 104 29-133 14-119 (121)
11 TIGR01262 maiA maleylacetoacet 99.8 6.4E-18 1.4E-22 114.6 9.8 119 1-125 69-205 (210)
12 PLN02395 glutathione S-transfe 99.8 5.2E-18 1.1E-22 115.5 9.1 122 1-124 70-210 (215)
13 PLN02473 glutathione S-transfe 99.8 4.2E-18 9E-23 115.9 8.1 122 1-124 71-211 (214)
14 PLN02817 glutathione dehydroge 99.7 2.9E-17 6.4E-22 114.9 11.0 127 1-131 130-258 (265)
15 PRK10357 putative glutathione 99.7 1.6E-17 3.5E-22 112.0 9.5 121 1-125 67-201 (202)
16 PRK13972 GSH-dependent disulfi 99.7 1.2E-17 2.7E-22 113.7 8.6 117 1-125 76-206 (215)
17 cd03203 GST_C_Lambda GST_C fam 99.7 1.9E-17 4.1E-22 103.2 8.1 113 18-132 1-119 (120)
18 PRK11752 putative S-transferas 99.7 2.6E-17 5.7E-22 115.3 9.0 122 1-126 122-260 (264)
19 cd03196 GST_C_5 GST_C family, 99.7 4.8E-17 1E-21 100.7 9.1 104 17-122 2-115 (115)
20 PLN02378 glutathione S-transfe 99.7 4.1E-17 8.9E-22 111.1 9.4 126 1-130 77-205 (213)
21 COG0625 Gst Glutathione S-tran 99.7 8.1E-17 1.7E-21 109.4 9.0 113 1-119 69-199 (211)
22 cd03188 GST_C_Beta GST_C famil 99.7 2E-16 4.4E-21 97.3 8.9 74 44-122 41-114 (114)
23 PRK15113 glutathione S-transfe 99.7 1.2E-16 2.6E-21 108.9 8.4 117 1-126 76-210 (214)
24 cd03209 GST_C_Mu GST_C family, 99.7 3E-16 6.6E-21 97.9 9.2 82 41-126 30-111 (121)
25 PTZ00057 glutathione s-transfe 99.7 1.6E-16 3.5E-21 107.5 6.6 118 1-126 76-201 (205)
26 cd03182 GST_C_GTT2_like GST_C 99.7 9.4E-16 2E-20 94.9 9.0 97 18-118 1-117 (117)
27 KOG0868 Glutathione S-transfer 99.6 7.5E-16 1.6E-20 99.3 7.3 119 1-125 75-208 (217)
28 PF00043 GST_C: Glutathione S- 99.6 2.6E-15 5.5E-20 89.6 8.9 71 42-116 24-95 (95)
29 cd03210 GST_C_Pi GST_C family, 99.6 2E-15 4.4E-20 94.8 8.3 81 42-126 31-114 (126)
30 cd03191 GST_C_Zeta GST_C famil 99.6 3.7E-15 8.1E-20 92.8 9.4 75 45-124 43-119 (121)
31 cd03178 GST_C_Ure2p_like GST_C 99.6 1.4E-15 2.9E-20 93.6 7.3 78 41-122 35-112 (113)
32 cd03189 GST_C_GTT1_like GST_C 99.6 4.7E-15 1E-19 92.0 8.9 96 16-116 2-119 (119)
33 cd03208 GST_C_Alpha GST_C fami 99.6 7.3E-15 1.6E-19 93.5 8.8 75 48-126 41-117 (137)
34 cd03207 GST_C_8 GST_C family, 99.6 6.6E-15 1.4E-19 89.2 8.2 76 43-124 27-102 (103)
35 cd03187 GST_C_Phi GST_C family 99.6 6.8E-15 1.5E-19 91.1 8.3 79 41-122 40-118 (118)
36 cd03177 GST_C_Delta_Epsilon GS 99.6 5.2E-15 1.1E-19 91.8 7.3 76 43-122 35-110 (118)
37 cd03200 GST_C_JTV1 GST_C famil 99.6 9.6E-15 2.1E-19 87.5 7.4 95 1-114 1-95 (96)
38 KOG0867 Glutathione S-transfer 99.6 1.8E-14 3.8E-19 98.9 9.3 123 1-125 71-210 (226)
39 cd03204 GST_C_GDAP1 GST_C fami 99.6 1.7E-14 3.8E-19 88.2 7.8 74 41-118 24-111 (111)
40 cd03181 GST_C_EFB1gamma GST_C 99.6 1.7E-14 3.6E-19 90.0 7.9 84 41-126 35-118 (123)
41 cd03183 GST_C_Theta GST_C fami 99.6 2.8E-14 6.1E-19 89.4 8.8 78 41-122 40-120 (126)
42 PF13410 GST_C_2: Glutathione 99.6 4.5E-14 9.8E-19 79.5 8.0 68 42-111 2-69 (69)
43 cd03180 GST_C_2 GST_C family, 99.5 1.1E-13 2.3E-18 84.6 8.1 71 43-118 40-110 (110)
44 cd03206 GST_C_7 GST_C family, 99.5 1E-13 2.2E-18 83.6 7.5 71 43-118 30-100 (100)
45 PLN02907 glutamate-tRNA ligase 99.5 6.8E-14 1.5E-18 109.1 6.6 104 1-117 56-159 (722)
46 cd03195 GST_C_4 GST_C family, 99.5 6.4E-13 1.4E-17 82.0 8.4 73 43-123 39-112 (114)
47 PRK10387 glutaredoxin 2; Provi 99.4 9.8E-14 2.1E-18 94.1 4.6 68 45-119 141-208 (210)
48 cd03194 GST_C_3 GST_C family, 99.4 1.2E-12 2.5E-17 80.9 8.9 71 45-123 40-113 (114)
49 KOG1695 Glutathione S-transfer 99.4 2.7E-13 5.8E-18 91.1 6.0 118 1-125 69-201 (206)
50 cd03202 GST_C_etherase_LigE GS 99.4 1.2E-12 2.6E-17 82.0 8.2 68 44-114 56-123 (124)
51 KOG1422 Intracellular Cl- chan 99.4 1.7E-12 3.7E-17 85.8 8.9 135 2-137 79-218 (221)
52 cd03179 GST_C_1 GST_C family, 99.4 3.4E-12 7.3E-17 77.3 6.9 68 41-113 38-105 (105)
53 cd03192 GST_C_Sigma_like GST_C 99.3 3.6E-12 7.9E-17 77.2 6.4 68 41-112 34-104 (104)
54 PF14497 GST_C_3: Glutathione 99.3 3.5E-12 7.7E-17 76.7 6.2 66 43-114 32-99 (99)
55 cd00299 GST_C_family Glutathio 99.3 7.9E-12 1.7E-16 74.7 7.5 70 41-112 31-100 (100)
56 cd03193 GST_C_Metaxin GST_C fa 99.3 8.9E-12 1.9E-16 73.4 7.3 69 44-113 17-88 (88)
57 TIGR02182 GRXB Glutaredoxin, G 99.3 5.6E-12 1.2E-16 85.6 5.1 67 45-119 140-207 (209)
58 KOG4420 Uncharacterized conser 99.3 3.3E-11 7.2E-16 82.3 8.2 94 45-138 204-301 (325)
59 cd03211 GST_C_Metaxin2 GST_C f 99.1 1.9E-10 4.1E-15 72.2 5.8 71 43-113 54-126 (126)
60 cd03205 GST_C_6 GST_C family, 99.1 5.1E-10 1.1E-14 67.1 7.2 67 41-112 32-98 (98)
61 COG0435 ECM4 Predicted glutath 99.1 1.1E-10 2.4E-15 80.4 3.2 120 12-133 165-295 (324)
62 cd03212 GST_C_Metaxin1_3 GST_C 99.0 1.5E-09 3.3E-14 69.0 7.8 71 43-114 61-134 (137)
63 cd03197 GST_C_mPGES2 GST_C fam 99.0 2.6E-09 5.7E-14 68.2 7.0 65 46-114 79-145 (149)
64 KOG2903 Predicted glutathione 98.9 4.9E-10 1.1E-14 76.6 2.8 121 11-133 162-297 (319)
65 PF14834 GST_C_4: Glutathione 98.9 2.9E-08 6.3E-13 60.1 8.9 98 18-123 1-113 (117)
66 KOG4244 Failed axon connection 98.3 1.5E-06 3.3E-11 60.0 4.4 69 45-115 202-273 (281)
67 KOG3027 Mitochondrial outer me 97.9 6.9E-05 1.5E-09 50.2 6.2 71 44-115 175-248 (257)
68 PF04399 Glutaredoxin2_C: Glut 97.8 0.00013 2.8E-09 45.9 6.9 68 44-118 57-124 (132)
69 cd03199 GST_C_GRX2 GST_C famil 97.6 0.00054 1.2E-08 42.9 7.1 67 45-118 59-125 (128)
70 KOG3029 Glutathione S-transfer 97.4 0.00051 1.1E-08 48.3 6.0 65 47-114 289-354 (370)
71 KOG3028 Translocase of outer m 97.1 0.0028 6E-08 45.2 6.7 71 44-115 161-234 (313)
72 KOG1147 Glutamyl-tRNA syntheta 95.8 0.0026 5.7E-08 48.6 0.2 70 48-119 90-159 (712)
73 PF11801 Tom37_C: Tom37 C-term 92.7 0.48 1E-05 31.2 5.5 37 50-86 112-152 (168)
74 COG2999 GrxB Glutaredoxin 2 [P 92.5 0.56 1.2E-05 31.2 5.5 67 45-118 141-207 (215)
75 KOG1668 Elongation factor 1 be 88.7 0.66 1.4E-05 32.0 3.4 59 52-119 10-68 (231)
76 PRK15371 effector protein YopJ 42.2 1.3E+02 0.0029 21.8 6.0 65 46-113 23-87 (287)
77 PF07862 Nif11: Nitrogen fixat 40.2 35 0.00075 17.2 2.2 24 103-126 4-27 (49)
78 KOG0489 Transcription factor z 38.3 22 0.00048 25.2 1.6 38 105-142 180-217 (261)
79 cd06891 PX_Vps17p The phosphoi 34.5 43 0.00093 21.5 2.3 19 101-119 110-128 (140)
80 TIGR03798 ocin_TIGR03798 bacte 32.8 48 0.001 17.8 2.1 26 103-128 2-27 (64)
81 PF12535 Nudix_N: Hydrolase of 30.2 94 0.002 16.6 3.6 33 104-136 3-35 (58)
82 PF11479 Suppressor_P21: RNA s 29.4 75 0.0016 19.9 2.7 35 107-141 57-91 (177)
83 PF00392 GntR: Bacterial regul 29.4 72 0.0016 16.9 2.4 30 53-82 4-34 (64)
84 PF03421 YopJ: YopJ Serine/Thr 26.4 1.2E+02 0.0027 20.2 3.6 38 49-87 2-39 (177)
85 PF12643 MazG-like: MazG-like 26.3 1.1E+02 0.0024 18.3 3.0 56 74-134 40-96 (98)
86 PF10990 DUF2809: Protein of u 26.0 57 0.0012 19.1 1.7 18 66-83 71-88 (91)
87 PF11732 Thoc2: Transcription- 25.5 1.4E+02 0.003 17.0 3.2 43 65-113 34-76 (77)
88 COG4902 Uncharacterized protei 24.0 94 0.002 20.2 2.5 28 114-141 76-103 (189)
89 cd08200 catalase_peroxidase_2 21.9 2.8E+02 0.0062 20.3 4.8 39 50-88 73-113 (297)
90 PF09968 DUF2202: Uncharacteri 21.5 1.6E+02 0.0036 19.4 3.3 27 115-141 28-54 (162)
91 PF10653 Phage-A118_gp45: Prot 20.2 1.5E+02 0.0033 15.4 3.1 28 109-136 22-53 (62)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.9e-23 Score=139.95 Aligned_cols=140 Identities=43% Similarity=0.796 Sum_probs=115.5
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccc---c----ccchhhhhccC-hHHHHHHHHHHHHHHHHHHHHhC-CCCcccCC
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFW---V----YNAGTKIWSLK-GEELETAKKEFIEIMKTLEAELG-DKSYFGGD 71 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~---~----~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~ 71 (142)
++|||+.+++.++++|+||.+|++++.| + +.....++..+ ++..+...+++...|..+|+.|. +++|+.|+
T Consensus 76 veYiDe~w~~~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~ 155 (231)
T KOG0406|consen 76 VEYIDETWPSGPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGE 155 (231)
T ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 5899999995588999999999999999 2 22334444433 56778888899999999999998 78999999
Q ss_pred CCChhHHhHHHHHHHHHHh-HhhcCCcc--cccChHHHHHHHHHhccHHHHhhcCChHHHHHHHHHHHHhhc
Q 040675 72 NFGFVDASLIPFYCWFYSY-ETLGNFSI--ETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFVLMLRKRYG 140 (142)
Q Consensus 72 ~~t~aDi~~~~~l~~~~~~-~~~~~~~~--~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 140 (142)
+++++|++++|++.++... ....+.++ ..++|+|.+|++||.++|+|++++++.+.+.++++.+++...
T Consensus 156 ~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 156 TIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred CcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 9999999999888754433 33333332 588999999999999999999999999999999999998754
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.85 E-value=1.1e-20 Score=128.38 Aligned_cols=122 Identities=21% Similarity=0.428 Sum_probs=96.7
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccccc---cchhh----hhccChHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCC
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWVY---NAGTK----IWSLKGEELETAKKEFIEIMKTLEAELGDKSYFGGDNF 73 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~ 73 (142)
++||+++|+ +++|+|.++.+|+++++|+. ..+.. +....++..+.....+...+..+|++|++++|++|+++
T Consensus 76 l~YL~~~~~-~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~ 154 (211)
T PRK09481 76 MEYLDERFP-HPPLMPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFGEKPYFMSEEF 154 (211)
T ss_pred HHHHHHhCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCc
Confidence 479999998 77899999999999998832 11111 11222445566777899999999999998999999999
Q ss_pred ChhHHhHHHHHHHHHHhHhhcCCccc-ccChHHHHHHHHHhccHHHHhhcCChHH
Q 040675 74 GFVDASLIPFYCWFYSYETLGNFSIE-TECPKIIAWAKRCMQKETVSKSLKDEKK 127 (142)
Q Consensus 74 t~aDi~~~~~l~~~~~~~~~~~~~~~-~~~p~l~~~~~r~~~~p~~~~~~~~~~~ 127 (142)
|+|||++++.+.++... +.++. ..+|+|.+|+++|.++|++++++.+...
T Consensus 155 t~AD~~l~~~~~~~~~~----~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~~~~ 205 (211)
T PRK09481 155 SLVDCYLAPLLWRLPVL----GIELSGPGAKELKGYMTRVFERDSFLASLTEAER 205 (211)
T ss_pred cHHHHHHHHHHHHHHhc----CCCCCCCCChhHHHHHHHHhccHHHHHHcCHHHH
Confidence 99999999998766532 44442 5799999999999999999999887544
No 3
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.83 E-value=1.1e-19 Score=124.83 Aligned_cols=137 Identities=16% Similarity=0.260 Sum_probs=104.1
Q ss_pred CcccccccCC--CCCCCCCCHHHHHHhccccccchhhhhccC-hHHHHHHHHHHHHHHHHHHHHhC--------------
Q 040675 1 MQYVDEVWSD--KNPLLPSDSYQRAHARFWVYNAGTKIWSLK-GEELETAKKEFIEIMKTLEAELG-------------- 63 (142)
Q Consensus 1 ~~YL~~~~~~--~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~-------------- 63 (142)
++||++.|++ .+++.|.++..++.... +...+..++... +...+...+.+.+.++.||++|.
T Consensus 76 ~eYL~e~~~~~~~p~l~p~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~ 154 (236)
T TIGR00862 76 EEFLEETLCPPRYPKLSPKHPESNTAGLD-IFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAED 154 (236)
T ss_pred HHHHHHHcCCCCCCCCCCCCHHHHHHHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Confidence 4799999973 25577777766664321 222222223222 33344556678999999999996
Q ss_pred ----CCCcccCCCCChhHHhHHHHHHHHHHh-HhhcCCcccccChHHHHHHHHHhccHHHHhhcCChHHHHHHHHHHHHh
Q 040675 64 ----DKSYFGGDNFGFVDASLIPFYCWFYSY-ETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFVLMLRKR 138 (142)
Q Consensus 64 ----~~~~l~G~~~t~aDi~~~~~l~~~~~~-~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~~~~~~~ 138 (142)
+++|++|+++|+|||+++|.+.++... .+..++++.+.+|+|.+|++++.++|+|+.++++.+.+...++...+.
T Consensus 155 ~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~~~ 234 (236)
T TIGR00862 155 EKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVAKR 234 (236)
T ss_pred ccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHhhc
Confidence 479999999999999999999988764 345577767899999999999999999999999999998888877544
No 4
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.82 E-value=2.3e-19 Score=112.50 Aligned_cols=115 Identities=46% Similarity=0.850 Sum_probs=90.1
Q ss_pred HHHHHhcccc-------ccchhhhhccChHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHh
Q 040675 20 YQRAHARFWV-------YNAGTKIWSLKGEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYET 92 (142)
Q Consensus 20 ~~~a~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~ 92 (142)
.+|+++++|+ .+.+...+...++..+.....+.+.++.||++|++++|++|+++|+|||++++.+.++..+..
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~ 81 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEE 81 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 4688888882 233333333334455667888999999999999989999999999999999999998765433
Q ss_pred hcCCcc--cccChHHHHHHHHHhccHHHHhhcCChHHHHHHHHH
Q 040675 93 LGNFSI--ETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFVLM 134 (142)
Q Consensus 93 ~~~~~~--~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~~~ 134 (142)
..+.+. ...+|++.+|+++|.++|+++++++..+.+.+++++
T Consensus 82 ~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 82 VGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HcCccccCcccCchHHHHHHHHHhccHHHHhCCCHHHHHHHHHh
Confidence 333331 367999999999999999999999999888887764
No 5
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.80 E-value=1.7e-19 Score=121.58 Aligned_cols=119 Identities=24% Similarity=0.422 Sum_probs=91.7
Q ss_pred CcccccccCCCCCCC-CCCHHHHHHhcccc-------ccchhhhhccC--hHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Q 040675 1 MQYVDEVWSDKNPLL-PSDSYQRAHARFWV-------YNAGTKIWSLK--GEELETAKKEFIEIMKTLEAELGDKSYFGG 70 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~-p~~~~~~a~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~G 70 (142)
++||++.++ +++++ |.++.+|+++++|+ .+.+...+... ++........+.+.++.+|++|++++|++|
T Consensus 70 ~~YL~~~~~-~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G 148 (201)
T PRK10542 70 MQYLADSVP-DRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALADEQWICG 148 (201)
T ss_pred HHHHHHhCc-ccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeC
Confidence 479999998 66666 66888999998882 12222222222 223455667899999999999998899999
Q ss_pred CCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCCh
Q 040675 71 DNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDE 125 (142)
Q Consensus 71 ~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~ 125 (142)
+++|+|||++++++.+.... +.+ ...+|+|.+|+++|.++|++++++..+
T Consensus 149 ~~~s~ADi~l~~~~~~~~~~----~~~-~~~~p~l~~w~~~~~~~p~~k~~~~~~ 198 (201)
T PRK10542 149 QRFTIADAYLFTVLRWAYAV----KLN-LEGLEHIAAYMQRVAERPAVAAALKAE 198 (201)
T ss_pred CCCcHHhHHHHHHHHHhhcc----CCC-cccchHHHHHHHHHHcCHHHHHHHHHc
Confidence 99999999999998876432 444 368999999999999999999987653
No 6
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.79 E-value=1.6e-18 Score=108.56 Aligned_cols=113 Identities=24% Similarity=0.378 Sum_probs=88.4
Q ss_pred HHHHhccc------cccchhhhhccChHHHHHHHHHHHHHHHHHHHHhCC--CCcccCCCCChhHHhHHHHHHHHHHhHh
Q 040675 21 QRAHARFW------VYNAGTKIWSLKGEELETAKKEFIEIMKTLEAELGD--KSYFGGDNFGFVDASLIPFYCWFYSYET 92 (142)
Q Consensus 21 ~~a~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~l~~~~~~~~ 92 (142)
+||+.+.| +.+.+.+.+.. ++..+...+.+...++.+|+.|++ ++|++|+++|+|||++++++.++..+..
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~ 80 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLLGA-PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKL 80 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHHhc-cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHh
Confidence 47777777 22333344433 445667888999999999999975 7999999999999999999987765432
Q ss_pred hcCCc-ccccChHHHHHHHHHhccHHHHhhcCChHHHHHHHHH
Q 040675 93 LGNFS-IETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFVLM 134 (142)
Q Consensus 93 ~~~~~-~~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~~~ 134 (142)
..+.. ..+.+|+|.+|+++|.++|+++.++++.+.+.++++.
T Consensus 81 ~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 81 LLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred hccccCCcccChHHHHHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 22211 1478999999999999999999999999999998874
No 7
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.78 E-value=4.1e-18 Score=104.06 Aligned_cols=99 Identities=23% Similarity=0.373 Sum_probs=77.7
Q ss_pred HHHHHHhccc-------cccchhhhhccChHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhH
Q 040675 19 SYQRAHARFW-------VYNAGTKIWSLKGEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYE 91 (142)
Q Consensus 19 ~~~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~ 91 (142)
|.+|++++.| +.+.+.....++++..+.....+.+.++.||++|++++|++|+++|+|||++++.+.++..
T Consensus 1 p~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~-- 78 (107)
T cd03186 1 PVARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPA-- 78 (107)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHH--
Confidence 3578889888 2233333333335556678889999999999999999999999999999999999865542
Q ss_pred hhcCCcccccChHHHHHHHHHhccHHHHhh
Q 040675 92 TLGNFSIETECPKIIAWAKRCMQKETVSKS 121 (142)
Q Consensus 92 ~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~ 121 (142)
.+.++...+|+|.+|+++|.++|+++++
T Consensus 79 --~~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 79 --LGIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred --cCCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 2544445899999999999999999875
No 8
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.77 E-value=7.2e-18 Score=106.16 Aligned_cols=104 Identities=15% Similarity=0.266 Sum_probs=82.6
Q ss_pred cccchhhhhccC-hHHHHHHHHHHHHHHHHHHHHhCC----------------CCcccCCCCChhHHhHHHHHHHHHHhH
Q 040675 29 VYNAGTKIWSLK-GEELETAKKEFIEIMKTLEAELGD----------------KSYFGGDNFGFVDASLIPFYCWFYSYE 91 (142)
Q Consensus 29 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~----------------~~~l~G~~~t~aDi~~~~~l~~~~~~~ 91 (142)
+++.+..++.++ ++..+.....+.+.|..||.+|++ ++|++|+++|+|||+++|.+.++....
T Consensus 11 ~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~ 90 (134)
T cd03198 11 IFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVA 90 (134)
T ss_pred HHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 344455556554 455677778999999999999986 679999999999999999998775432
Q ss_pred h-hcCCcccccChHHHHHHHHHhccHHHHhhcCChHHHHHHH
Q 040675 92 T-LGNFSIETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFV 132 (142)
Q Consensus 92 ~-~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~ 132 (142)
. ..+......+|+|.+|+++|.+||+++++++..+.+...+
T Consensus 91 ~~~~g~~i~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~ 132 (134)
T cd03198 91 KKYRNFEIPADLTGLWRYLKNAYQREEFTNTCPADQEIELAY 132 (134)
T ss_pred HhhcCCCccccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHh
Confidence 1 2355545789999999999999999999999997776554
No 9
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.77 E-value=3.7e-18 Score=109.33 Aligned_cols=117 Identities=19% Similarity=0.162 Sum_probs=90.1
Q ss_pred HHHHhccc-------cccchhhhhc-cChHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhH-
Q 040675 21 QRAHARFW-------VYNAGTKIWS-LKGEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYE- 91 (142)
Q Consensus 21 ~~a~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~- 91 (142)
.|+.+++| +.+.+..... ..++..+.....+...++.+|++|++++|++|+++|+|||++++.+.++....
T Consensus 4 ~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~ 83 (142)
T cd03190 4 LRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYV 83 (142)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhh
Confidence 46777777 2233333322 33556777888999999999999998999999999999999999987653321
Q ss_pred hhc--CCcccccChHHHHHHHHHhccHHHHhhcCChHHHHHHHHHHHH
Q 040675 92 TLG--NFSIETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFVLMLRK 137 (142)
Q Consensus 92 ~~~--~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~~~~~~ 137 (142)
... +......||+|.+|+++|.++|++++++..+..+.+|++++++
T Consensus 84 ~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 84 QHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred hhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 111 1122368999999999999999999999999999999999854
No 10
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.76 E-value=1.5e-17 Score=103.71 Aligned_cols=104 Identities=15% Similarity=0.279 Sum_probs=80.5
Q ss_pred cccchhhhhccChHHHHHHHHHHHHHHHHHHHHhCC-CCcccCCCCChhHHhHHHHHHHHHHh-HhhcCCcccccChHHH
Q 040675 29 VYNAGTKIWSLKGEELETAKKEFIEIMKTLEAELGD-KSYFGGDNFGFVDASLIPFYCWFYSY-ETLGNFSIETECPKII 106 (142)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aDi~~~~~l~~~~~~-~~~~~~~~~~~~p~l~ 106 (142)
+.+.+..++..+++. ++..+.+.+.+..||.+|++ ++|++|+++|+|||+++|++.++... ....+......+|+|.
T Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~ 92 (121)
T cd03201 14 IFSTFVGFLKSKDSN-DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVK 92 (121)
T ss_pred HHHHHHHHHHCCcHH-HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHH
Confidence 445555555544332 55667899999999999985 79999999999999999988766532 2222443347899999
Q ss_pred HHHHHHhccHHHHhhcCChHHHHHHHH
Q 040675 107 AWAKRCMQKETVSKSLKDEKKVFEFVL 133 (142)
Q Consensus 107 ~~~~r~~~~p~~~~~~~~~~~~~~~~~ 133 (142)
+|+++|.+||+|+++++....+.+.++
T Consensus 93 ~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 93 SYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 999999999999999999888776654
No 11
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.76 E-value=6.4e-18 Score=114.60 Aligned_cols=119 Identities=19% Similarity=0.234 Sum_probs=90.7
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhcccc--c-cc--------hhhhhcc----ChH-HHHHHHHHHHHHHHHHHHHhCC
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWV--Y-NA--------GTKIWSL----KGE-ELETAKKEFIEIMKTLEAELGD 64 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~--~-~~--------~~~~~~~----~~~-~~~~~~~~~~~~l~~le~~L~~ 64 (142)
++||+++++ .+.|+|.++.+++++++|+ . .. +...+.. .+. ..+...+.+.+.++.||++|++
T Consensus 69 ~~yl~~~~~-~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~ 147 (210)
T TIGR01262 69 IEYLEETYP-DPPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQP 147 (210)
T ss_pred HHHHHHhCC-CCCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 479999998 6779999999999999992 1 11 1112211 122 2333456788999999999986
Q ss_pred --CCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCCh
Q 040675 65 --KSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDE 125 (142)
Q Consensus 65 --~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~ 125 (142)
++|++|+++|+|||++++.+.++..+ +.+ .+.||+|.+|+++|.++|++++++.+.
T Consensus 148 ~~~~~l~G~~~T~ADi~~~~~l~~~~~~----~~~-~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 148 HAGAFCVGDTPTLADLCLVPQVYNAERF----GVD-LTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred CCCCEeeCCCCCHHHHHHHHHHHHHHHc----CCC-cccchHHHHHHHHHhcCHHHHHhCccc
Confidence 46999999999999999999876432 333 378999999999999999999998764
No 12
>PLN02395 glutathione S-transferase
Probab=99.76 E-value=5.2e-18 Score=115.46 Aligned_cols=122 Identities=17% Similarity=0.354 Sum_probs=90.9
Q ss_pred CcccccccCC-CCCCCCCCHHHHHHhcccc-------ccchhh----h-h----c--cChHHHHHHHHHHHHHHHHHHHH
Q 040675 1 MQYVDEVWSD-KNPLLPSDSYQRAHARFWV-------YNAGTK----I-W----S--LKGEELETAKKEFIEIMKTLEAE 61 (142)
Q Consensus 1 ~~YL~~~~~~-~~~l~p~~~~~~a~~~~~~-------~~~~~~----~-~----~--~~~~~~~~~~~~~~~~l~~le~~ 61 (142)
++||+++|+. .++|+|.++.+++++++|+ ++.+.. . + . ..++........+.+.++.||++
T Consensus 70 ~~YL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~ 149 (215)
T PLN02395 70 MRYYAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEAR 149 (215)
T ss_pred HHHHHHHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999973 2369999999999999982 222211 1 1 1 11334556678899999999999
Q ss_pred hCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCC
Q 040675 62 LGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKD 124 (142)
Q Consensus 62 L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~ 124 (142)
|++++|++|+++|+|||++++++.+.... .........+|+|.+|+++|.++|++++++..
T Consensus 150 L~~~~~l~G~~~s~ADi~l~~~~~~~~~~--~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~ 210 (215)
T PLN02395 150 LSKSKYLAGDFVSLADLAHLPFTEYLVGP--IGKAYLIKDRKHVSAWWDDISSRPAWKEVLAK 210 (215)
T ss_pred hcCCccccCCCcCHHHHHHHHHHHHHhcc--cchhhhhccCchHHHHHHHHHcChHHHHHHHH
Confidence 99889999999999999999988765321 11111246789999999999999999998754
No 13
>PLN02473 glutathione S-transferase
Probab=99.75 E-value=4.2e-18 Score=115.88 Aligned_cols=122 Identities=20% Similarity=0.315 Sum_probs=90.9
Q ss_pred CcccccccCCC-CCCCCCCHHHHHHhcccc--c-cch---------hhhhc----cC--hHHHHHHHHHHHHHHHHHHHH
Q 040675 1 MQYVDEVWSDK-NPLLPSDSYQRAHARFWV--Y-NAG---------TKIWS----LK--GEELETAKKEFIEIMKTLEAE 61 (142)
Q Consensus 1 ~~YL~~~~~~~-~~l~p~~~~~~a~~~~~~--~-~~~---------~~~~~----~~--~~~~~~~~~~~~~~l~~le~~ 61 (142)
++||+++++.. .+|+|.++.+++++++|+ . ..+ ...+. .+ ....+....++.+.++.+|++
T Consensus 71 ~~YL~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~ 150 (214)
T PLN02473 71 ARYYATKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENR 150 (214)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 47999999732 369999999999999882 1 111 11121 11 234555667899999999999
Q ss_pred hCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCC
Q 040675 62 LGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKD 124 (142)
Q Consensus 62 L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~ 124 (142)
|++++|++|+++|+|||++++.+.+....... ....+++|+|.+|+++|.++|++++++..
T Consensus 151 L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~--~~~~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 151 LATNRYLGGDEFTLADLTHMPGMRYIMNETSL--SGLVTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred hccCCcccCCCCCHHHHHHHHHHHHHHhcccc--HHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 99889999999999999999998875432111 12247899999999999999999988653
No 14
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.74 E-value=2.9e-17 Score=114.88 Aligned_cols=127 Identities=14% Similarity=0.211 Sum_probs=93.5
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccccccchhhhhccChHHHHHHHHHHHHHHHHHHHHhCC-CCcccCCCCChhHHh
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWVYNAGTKIWSLKGEELETAKKEFIEIMKTLEAELGD-KSYFGGDNFGFVDAS 79 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aDi~ 79 (142)
++||+++|+ .+.+. ++.+++.++.+++..+..++...+. .+.....+.+.++.||++|++ ++|++|+++|+|||+
T Consensus 130 ~~YL~e~~p-~~~L~--~~~era~i~~~l~~~~~~~~~~~~~-~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~ 205 (265)
T PLN02817 130 TQALEEKYP-DPPLA--TPPEKASVGSKIFSTFIGFLKSKDP-GDGTEQALLDELTSFDDYIKENGPFINGEKISAADLS 205 (265)
T ss_pred HHHHHHHCC-CCCCC--CHHHHHHHHHHHHHHHHHHhccCCc-chHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHH
Confidence 479999999 56664 5778999888765544444332211 112235677889999999974 699999999999999
Q ss_pred HHHHHHHHHHh-HhhcCCcccccChHHHHHHHHHhccHHHHhhcCChHHHHHH
Q 040675 80 LIPFYCWFYSY-ETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDEKKVFEF 131 (142)
Q Consensus 80 ~~~~l~~~~~~-~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~ 131 (142)
++|.+.++... ....+.++.+.+|+|.+|+++|.++|+++++++..+.+.+-
T Consensus 206 l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~~~~~~~ 258 (265)
T PLN02817 206 LGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALPEDVIAG 258 (265)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCHHHHHHH
Confidence 99999876532 11223444578999999999999999999999986665443
No 15
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.74 E-value=1.6e-17 Score=112.04 Aligned_cols=121 Identities=12% Similarity=0.165 Sum_probs=90.8
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhcccc--c-cch---h---h-hhcc----ChHHHHHHHHHHHHHHHHHHHHhCCCC
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWV--Y-NAG---T---K-IWSL----KGEELETAKKEFIEIMKTLEAELGDKS 66 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~--~-~~~---~---~-~~~~----~~~~~~~~~~~~~~~l~~le~~L~~~~ 66 (142)
++||++.++ +++|+|.++.+++++++|. . ..+ . . .... .+...+....++...++.||++|++++
T Consensus 67 ~~yL~~~~~-~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~ 145 (202)
T PRK10357 67 AEYIELLNV-APAMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT 145 (202)
T ss_pred HHHHHHhCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 479999988 6779999999999988881 1 111 0 0 1111 123345667789999999999998878
Q ss_pred cccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCCh
Q 040675 67 YFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDE 125 (142)
Q Consensus 67 ~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~ 125 (142)
++|+++|+|||++++.+.|+... .. +......+|+|.+|+++|.++|+++++.++.
T Consensus 146 -l~Gd~~t~ADi~l~~~l~~~~~~-~~-~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~~ 201 (202)
T PRK10357 146 -LKTDTVNLATIAIACAVGYLNFR-RV-APGWCVDRPHLVKLVENLFQRESFARTEPPK 201 (202)
T ss_pred -ccCCCcCHHHHHHHHHHHHHHhc-cc-CcchhhcChHHHHHHHHHhcChhhhhcCCCC
Confidence 99999999999999999877542 11 1122367999999999999999999988763
No 16
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.74 E-value=1.2e-17 Score=113.70 Aligned_cols=117 Identities=16% Similarity=0.304 Sum_probs=87.3
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhcccc-------ccchhhh--hcc-----ChHHHHHHHHHHHHHHHHHHHHhCCCC
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWV-------YNAGTKI--WSL-----KGEELETAKKEFIEIMKTLEAELGDKS 66 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~-------~~~~~~~--~~~-----~~~~~~~~~~~~~~~l~~le~~L~~~~ 66 (142)
++||++.++ .+.|.++.+|+++++|+ .+.+... +.. .+...+.....+.+.+..||.+|++++
T Consensus 76 ~~YL~~~~~---~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~ 152 (215)
T PRK13972 76 LLYLAEKTG---LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSP 152 (215)
T ss_pred HHHHHHhcC---CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCc
Confidence 479999986 26788999999999992 1111110 111 123345566778899999999999889
Q ss_pred cccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCCh
Q 040675 67 YFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDE 125 (142)
Q Consensus 67 ~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~ 125 (142)
|++|+++|+|||++++.+..... .+.+ ...||+|.+|+++|.++|++++++...
T Consensus 153 ~l~Gd~~t~ADi~l~~~~~~~~~----~~~~-~~~~P~l~~w~~r~~~rp~~~~~~~~~ 206 (215)
T PRK13972 153 WLGGENYSIADIACWPWVNAWTR----QRID-LAMYPAVKNWHERIRSRPATGQALLKA 206 (215)
T ss_pred cccCCCCCHHHHHHHHHHHHHhh----cCCc-chhCHHHHHHHHHHHhCHHHHHHHHHh
Confidence 99999999999999887753322 1334 378999999999999999999876543
No 17
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.73 E-value=1.9e-17 Score=103.20 Aligned_cols=113 Identities=23% Similarity=0.358 Sum_probs=79.5
Q ss_pred CHHHHHHhccccc--cchhhhhccChHHHHHHHHHHHHHHHHHHHHhC---CCCcccCCCCChhHHhHHHHHHHHHHh-H
Q 040675 18 DSYQRAHARFWVY--NAGTKIWSLKGEELETAKKEFIEIMKTLEAELG---DKSYFGGDNFGFVDASLIPFYCWFYSY-E 91 (142)
Q Consensus 18 ~~~~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~t~aDi~~~~~l~~~~~~-~ 91 (142)
|+.+|+.+++++. ..+...+..+- .......++.+.++.||+.|+ +++|++| ++|+|||+++|++.++... .
T Consensus 1 d~~~ra~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~ 78 (120)
T cd03203 1 DPAKREFADELLAYTDAFTKALYSSL-IKGDPSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLS 78 (120)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCchHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHH
Confidence 5678888888832 33322211100 000012244667778888886 4799999 9999999999999876532 2
Q ss_pred hhcCCcccccChHHHHHHHHHhccHHHHhhcCChHHHHHHH
Q 040675 92 TLGNFSIETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFV 132 (142)
Q Consensus 92 ~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~ 132 (142)
...+.++...+|+|.+|+++|.++|+++++.++.+.+.+++
T Consensus 79 ~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~~~~~~~~ 119 (120)
T cd03203 79 ELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDPQELLDLA 119 (120)
T ss_pred HhcCccccccCcHHHHHHHHHhcchHHHhHcCCHHHHHhhh
Confidence 23455555689999999999999999999999998888765
No 18
>PRK11752 putative S-transferase; Provisional
Probab=99.73 E-value=2.6e-17 Score=115.33 Aligned_cols=122 Identities=16% Similarity=0.369 Sum_probs=90.1
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccccc---cc---hh----hhhc--cC--hHHHHHHHHHHHHHHHHHHHHhCCCC
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWVY---NA---GT----KIWS--LK--GEELETAKKEFIEIMKTLEAELGDKS 66 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~~---~~---~~----~~~~--~~--~~~~~~~~~~~~~~l~~le~~L~~~~ 66 (142)
++||+++|+ . |+|.++.+|+++++|+. .. +. ..+. +. +...+....++.+.|+.+|++|++++
T Consensus 122 l~YL~~~~~-~--L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~ 198 (264)
T PRK11752 122 LLYLAEKFG-A--FLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHE 198 (264)
T ss_pred HHHHHHhcC-C--cCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 579999987 3 99999999999999922 11 11 1111 11 22345556678899999999999889
Q ss_pred cccCCCCChhHHhHHHHHHHHHHhHhh--cC-CcccccChHHHHHHHHHhccHHHHhhcCChH
Q 040675 67 YFGGDNFGFVDASLIPFYCWFYSYETL--GN-FSIETECPKIIAWAKRCMQKETVSKSLKDEK 126 (142)
Q Consensus 67 ~l~G~~~t~aDi~~~~~l~~~~~~~~~--~~-~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~ 126 (142)
|++|+++|+|||++++++.++...... .. .+ ...||+|.+|+++|.++|++++++....
T Consensus 199 fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~-~~~~P~L~~w~~rv~~rPs~k~~~~~~~ 260 (264)
T PRK11752 199 YIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLD-VGSYKHVQRWAKEIAERPAVKRGRIVNR 260 (264)
T ss_pred CCCCCccCHHHHHHHHHHHHHhhccccccccccC-cccCHHHHHHHHHHHhCHHHHHHHhccc
Confidence 999999999999999988765431000 01 12 3689999999999999999999876654
No 19
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.73 E-value=4.8e-17 Score=100.66 Aligned_cols=104 Identities=20% Similarity=0.277 Sum_probs=77.9
Q ss_pred CCHHHHHHhcccc-------ccchhhhhccC---hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHH
Q 040675 17 SDSYQRAHARFWV-------YNAGTKIWSLK---GEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCW 86 (142)
Q Consensus 17 ~~~~~~a~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~ 86 (142)
.||..++++++|+ .+.+....... .+..+.....+.+.++.+|++|++++|++|+++|+|||++++.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~ 81 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQ 81 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHH
Confidence 4788999999992 22222211111 2246677889999999999999999999999999999999998876
Q ss_pred HHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhc
Q 040675 87 FYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSL 122 (142)
Q Consensus 87 ~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~ 122 (142)
+..... .+.+ ...+|+|.+|+++|.++|++++++
T Consensus 82 ~~~~~~-~~~~-~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 82 FAHVDP-KWFD-QSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred HHHhhh-cccC-cccCHHHHHHHHHHHcChHHHhhC
Confidence 543211 1222 378999999999999999999864
No 20
>PLN02378 glutathione S-transferase DHAR1
Probab=99.72 E-value=4.1e-17 Score=111.08 Aligned_cols=126 Identities=17% Similarity=0.285 Sum_probs=91.9
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccccccchhhhhccChHHHHHHHHHHHHHHHHHHHHhC--CCCcccCCCCChhHH
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWVYNAGTKIWSLKGEELETAKKEFIEIMKTLEAELG--DKSYFGGDNFGFVDA 78 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aDi 78 (142)
++||+++|+ ++.+ .++.+++.+...++..+..++.... ..+.....+.+.+..+|++|+ +++|++|+++|+|||
T Consensus 77 ~~YL~~~~~-~~~l--~~~~~~a~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi 152 (213)
T PLN02378 77 VGILEEKYP-DPPL--KTPAEFASVGSNIFGTFGTFLKSKD-SNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDL 152 (213)
T ss_pred HHHHHHhCC-CCCC--CCHHHHHHHHHHHHHHHHHHHhcCC-hhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhH
Confidence 479999998 5555 3577788776665544433333221 122334577788999999997 468999999999999
Q ss_pred hHHHHHHHHHHh-HhhcCCcccccChHHHHHHHHHhccHHHHhhcCChHHHHH
Q 040675 79 SLIPFYCWFYSY-ETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDEKKVFE 130 (142)
Q Consensus 79 ~~~~~l~~~~~~-~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~ 130 (142)
++++++.++... ....+.+....+|+|.+|+++|.++|++++++..+.....
T Consensus 153 ~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~ 205 (213)
T PLN02378 153 SLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYVIS 205 (213)
T ss_pred HHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHHHHH
Confidence 999998876532 1222333347899999999999999999999999877544
No 21
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=8.1e-17 Score=109.40 Aligned_cols=113 Identities=27% Similarity=0.489 Sum_probs=87.6
Q ss_pred CcccccccCCCCCCCCCCHH---HHHHhccc-------cccchhhhhcc--------ChHHHHHHHHHHHHHHHHHHHHh
Q 040675 1 MQYVDEVWSDKNPLLPSDSY---QRAHARFW-------VYNAGTKIWSL--------KGEELETAKKEFIEIMKTLEAEL 62 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~---~~a~~~~~-------~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~le~~L 62 (142)
++||+++|| .++|+|.++. +|+.+..| +++.+...... .....+.....+...+..+|..|
T Consensus 69 ~~YL~~~~~-~~~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 147 (211)
T COG0625 69 LEYLAERYP-GPPLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALL 147 (211)
T ss_pred HHHHHhhCC-CCCcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHh
Confidence 579999999 5559998885 67777677 12222221111 23456677889999999999999
Q ss_pred CCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHH
Q 040675 63 GDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVS 119 (142)
Q Consensus 63 ~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~ 119 (142)
++++|++|+++|+||+.+++.+.++... +.+. ..+|++.+|++|+.++|+++
T Consensus 148 ~~~~~l~G~~~tiAD~~~~~~~~~~~~~----~~~~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 148 ADGPYLAGDRFTIADIALAPLLWRLALL----GEEL-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred ccCCcccCCCCCHHHHHHHHHHHHhhhc----Cccc-ccChHHHHHHHHHHcCCchh
Confidence 9999999999999999999999875542 3343 78999999999999999964
No 22
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.69 E-value=2e-16 Score=97.34 Aligned_cols=74 Identities=23% Similarity=0.404 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhc
Q 040675 44 LETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSL 122 (142)
Q Consensus 44 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~ 122 (142)
.+.....+.+.++.+|+.|++++|++|+++|+|||++++.+.++.. .+.+ ..++|+|.+|+++|.++|++++++
T Consensus 41 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~-~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 41 KAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPG----VGLD-LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhh----cCCC-hhhChHHHHHHHHHHhCHHhHhhC
Confidence 5567788999999999999988999999999999999999987653 2333 368999999999999999999864
No 23
>PRK15113 glutathione S-transferase; Provisional
Probab=99.69 E-value=1.2e-16 Score=108.87 Aligned_cols=117 Identities=17% Similarity=0.194 Sum_probs=87.6
Q ss_pred CcccccccCCCCC---CCCCCHHHHHHhcccc--c-cchhh---------hhcc-C-hHHHHHHHHHHHHHHHHHHHHhC
Q 040675 1 MQYVDEVWSDKNP---LLPSDSYQRAHARFWV--Y-NAGTK---------IWSL-K-GEELETAKKEFIEIMKTLEAELG 63 (142)
Q Consensus 1 ~~YL~~~~~~~~~---l~p~~~~~~a~~~~~~--~-~~~~~---------~~~~-~-~~~~~~~~~~~~~~l~~le~~L~ 63 (142)
++||+++|+ ++. |+|.++.+++++++|+ . ..+.. .+.. . +...+...+++.+.+..+|++|+
T Consensus 76 ~~YL~~~~~-~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~ 154 (214)
T PRK15113 76 AEYLEERFA-PPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLA 154 (214)
T ss_pred HHHHHHHcC-CCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 479999998 554 9999999999999882 1 11111 1111 1 22345566788999999999997
Q ss_pred C-CCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCChH
Q 040675 64 D-KSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDEK 126 (142)
Q Consensus 64 ~-~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~ 126 (142)
+ ++|++|+ +|+|||++++++.++.. .+.++ .|+|.+|++||.++|++++++.+.+
T Consensus 155 ~~~~~l~G~-~TlADi~l~~~l~~~~~----~~~~~---~p~l~~~~~r~~~rp~~~~~~~~~~ 210 (214)
T PRK15113 155 PGQPNLFGE-WCIADTDLALMLNRLVL----HGDEV---PERLADYATFQWQRASVQRWLALSA 210 (214)
T ss_pred cCCCEeeCC-ccHHHHHHHHHHHHHHH----cCCCC---CHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 5 4799996 99999999999987643 23332 2999999999999999999876644
No 24
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.69 E-value=3e-16 Score=97.85 Aligned_cols=82 Identities=17% Similarity=0.247 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHh
Q 040675 41 GEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSK 120 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~ 120 (142)
+...+.....+.+.++.||++|++++|++|+++|+||+++++.+.|+... +......+|+|.+|+++|.++|++++
T Consensus 30 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~----~~~~~~~~P~l~~~~~rv~~~p~vk~ 105 (121)
T cd03209 30 EKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF----EPDCLDAFPNLKDFLERFEALPKISA 105 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh----CccccccChHHHHHHHHHHHCHHHHH
Confidence 33455667789999999999999889999999999999999999887643 11224789999999999999999999
Q ss_pred hcCChH
Q 040675 121 SLKDEK 126 (142)
Q Consensus 121 ~~~~~~ 126 (142)
++.+..
T Consensus 106 ~~~~~~ 111 (121)
T cd03209 106 YMKSDR 111 (121)
T ss_pred HHhccc
Confidence 987764
No 25
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.67 E-value=1.6e-16 Score=107.54 Aligned_cols=118 Identities=16% Similarity=0.188 Sum_probs=82.4
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccccc---cchhhhhcc---ChHHHHHHHHHHHHHHHHHHHHhCCC--CcccCCC
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWVY---NAGTKIWSL---KGEELETAKKEFIEIMKTLEAELGDK--SYFGGDN 72 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~ 72 (142)
++||+++|+ +.+.+..+++.+...+. .....+... .++..+.....+.+.+..||++|+++ +|++|++
T Consensus 76 ~~YLa~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~ 151 (205)
T PTZ00057 76 VRYLSKKYK----ICGESELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEELPKWSGYFENILKKNHCNYFVGDN 151 (205)
T ss_pred HHHHHHHcC----CCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCc
Confidence 479999998 55666555554433311 111111110 11223345577889999999999753 8999999
Q ss_pred CChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCChH
Q 040675 73 FGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDEK 126 (142)
Q Consensus 73 ~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~ 126 (142)
+|+|||++++.+.++... .+.+ .+.||+|.+|++||.++|++++++.++.
T Consensus 152 ~T~AD~~l~~~~~~~~~~---~~~~-l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 152 LTYADLAVFNLYDDIETK---YPNS-LKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred ccHHHHHHHHHHHHHHHh---Chhh-hccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 999999999998876431 1333 3789999999999999999999987654
No 26
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.66 E-value=9.4e-16 Score=94.89 Aligned_cols=97 Identities=18% Similarity=0.277 Sum_probs=75.0
Q ss_pred CHHHHHHhccc-------cccchhhhhc------c-------ChHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhH
Q 040675 18 DSYQRAHARFW-------VYNAGTKIWS------L-------KGEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVD 77 (142)
Q Consensus 18 ~~~~~a~~~~~-------~~~~~~~~~~------~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD 77 (142)
|+.+|+.+++| +++.+...+. . .++..+.....+.+.+..||++|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 57789999999 2222222211 1 13446777888999999999999988999999999999
Q ss_pred HhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHH
Q 040675 78 ASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETV 118 (142)
Q Consensus 78 i~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~ 118 (142)
|++++.+.++... +.++...+|+|.+|+++|.++|++
T Consensus 81 i~l~~~~~~~~~~----~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVV----KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhc----CCCCccccHHHHHHHHHHHhccCC
Confidence 9999999876542 444446899999999999999974
No 27
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=7.5e-16 Score=99.26 Aligned_cols=119 Identities=24% Similarity=0.302 Sum_probs=94.6
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccc-------cccc----hhhhhccC--hHHHHHHHHHHHHHHHHHHHHhCC--C
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFW-------VYNA----GTKIWSLK--GEELETAKKEFIEIMKTLEAELGD--K 65 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~-------~~~~----~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~--~ 65 (142)
++||++.+| +++|+|.|+..|+.++++ +.+. +...+..+ ......+..-+.+.+..||+.|.. +
T Consensus 75 I~YLeEt~P-~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aG 153 (217)
T KOG0868|consen 75 IEYLEETYP-DPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAG 153 (217)
T ss_pred HHHHHhcCC-CCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccC
Confidence 479999999 999999999999999998 2222 22333322 223555666788999999999964 6
Q ss_pred CcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCCh
Q 040675 66 SYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDE 125 (142)
Q Consensus 66 ~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~ 125 (142)
+|-+||++|+||+++.|.+.-++.+ ..++ ..||.+.+..+.+.+.|+|+.+-++.
T Consensus 154 kycvGDevtiADl~L~pqv~nA~rf----~vdl-~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 154 KYCVGDEVTIADLCLPPQVYNANRF----HVDL-TPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred CcccCceeehhhhccchhhhhhhhc----cccC-CcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 8999999999999999999865432 4564 89999999999999999999987663
No 28
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.64 E-value=2.6e-15 Score=89.63 Aligned_cols=71 Identities=24% Similarity=0.476 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCccc-ccChHHHHHHHHHhccH
Q 040675 42 EELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIE-TECPKIIAWAKRCMQKE 116 (142)
Q Consensus 42 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~-~~~p~l~~~~~r~~~~p 116 (142)
+..+.....+.+.++.+|+.|++++|++|+++|+||+++++++.++... +.... +++|+|.+|+++|.++|
T Consensus 24 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 24 EMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERL----GPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----TTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----CCCcccccCHHHHHHHHHHHcCC
Confidence 3567778899999999999999999999999999999999999988765 33333 89999999999999998
No 29
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.63 E-value=2e-15 Score=94.79 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHH
Q 040675 42 EELETAKKEFIEIMKTLEAELGD---KSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETV 118 (142)
Q Consensus 42 ~~~~~~~~~~~~~l~~le~~L~~---~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~ 118 (142)
.......+.+.+.+..||++|++ ++|++|+++|+||+++++.+.|+... .+ .....+|+|.+|+++|.++|++
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~---~~-~~~~~~P~l~~~~~rv~~~p~v 106 (126)
T cd03210 31 AGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL---AP-GCLDAFPLLKAFVERLSARPKL 106 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh---Ch-HhhhcChHHHHHHHHHHhCcHH
Confidence 34455667789999999999974 58999999999999999999887542 11 2247899999999999999999
Q ss_pred HhhcCChH
Q 040675 119 SKSLKDEK 126 (142)
Q Consensus 119 ~~~~~~~~ 126 (142)
++++....
T Consensus 107 ~~~~~~~~ 114 (126)
T cd03210 107 KAYLESDA 114 (126)
T ss_pred HHHHhCcC
Confidence 99887654
No 30
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.63 E-value=3.7e-15 Score=92.82 Aligned_cols=75 Identities=16% Similarity=0.196 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHhC--CCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhc
Q 040675 45 ETAKKEFIEIMKTLEAELG--DKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSL 122 (142)
Q Consensus 45 ~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~ 122 (142)
+.....+.+.+..+|++|+ .++|++|+++|+|||++++.+.++... +.+ ...+|+|.+|++++.++|+++++.
T Consensus 43 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~-~~~~p~l~~w~~~~~~~p~~~~~~ 117 (121)
T cd03191 43 AWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRF----GVD-LSPYPTIARINEACLELPAFQAAH 117 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHh----CCC-cccCcHHHHHHHHHHhChhHHHhC
Confidence 3345678999999999997 457999999999999999998876432 444 378999999999999999999987
Q ss_pred CC
Q 040675 123 KD 124 (142)
Q Consensus 123 ~~ 124 (142)
+.
T Consensus 118 ~~ 119 (121)
T cd03191 118 PD 119 (121)
T ss_pred cC
Confidence 64
No 31
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.63 E-value=1.4e-15 Score=93.61 Aligned_cols=78 Identities=18% Similarity=0.392 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHh
Q 040675 41 GEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSK 120 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~ 120 (142)
+...+.....+...++.+|+.|++++|++|+++|+|||++++.+.+.... +.+....+|++.+|.++|.++|++++
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~~~~~~p~l~~w~~~~~~~p~~~~ 110 (113)
T cd03178 35 PYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWI----GIDDLDDFPNVKRWLDRIAARPAVQR 110 (113)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhc----cccchhhchHHHHHHHHHhhCHHHHH
Confidence 34456677889999999999999889999999999999999999876543 22334789999999999999999998
Q ss_pred hc
Q 040675 121 SL 122 (142)
Q Consensus 121 ~~ 122 (142)
++
T Consensus 111 ~~ 112 (113)
T cd03178 111 GL 112 (113)
T ss_pred hc
Confidence 65
No 32
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.62 E-value=4.7e-15 Score=92.04 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=72.5
Q ss_pred CCCHHHHHHhccc-------cccchhhh-----hcc---------C-hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCC
Q 040675 16 PSDSYQRAHARFW-------VYNAGTKI-----WSL---------K-GEELETAKKEFIEIMKTLEAELGDKSYFGGDNF 73 (142)
Q Consensus 16 p~~~~~~a~~~~~-------~~~~~~~~-----~~~---------~-~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~ 73 (142)
|.|+.+|+++++| +++.+... +.. . +...+.....+.+.++.||++|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 5789999999999 22222111 111 0 223344566899999999999999999999999
Q ss_pred ChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccH
Q 040675 74 GFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKE 116 (142)
Q Consensus 74 t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p 116 (142)
|+|||++++.+.|+... +.. ...+|+|.+|++++.++|
T Consensus 82 t~ADi~l~~~~~~~~~~----~~~-~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALAR----GPL-LEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHc----Ccc-cccCchHHHHHHHHhcCC
Confidence 99999999998876542 323 478999999999999986
No 33
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.60 E-value=7.3e-15 Score=93.54 Aligned_cols=75 Identities=17% Similarity=0.218 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHhC--CCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCCh
Q 040675 48 KKEFIEIMKTLEAELG--DKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDE 125 (142)
Q Consensus 48 ~~~~~~~l~~le~~L~--~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~ 125 (142)
...+.+.++.||++|+ +++|++|+++|+|||++++.+.++... .......+|+|.+|+++|.++|++++++...
T Consensus 41 ~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~----~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~ 116 (137)
T cd03208 41 EKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL----DPSLLSDFPLLQAFKTRISNLPTIKKFLQPG 116 (137)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh----chhhhccChHHHHHHHHHHcCHHHHHHHhcC
Confidence 3456789999999998 678999999999999999999887542 1222478999999999999999999988754
Q ss_pred H
Q 040675 126 K 126 (142)
Q Consensus 126 ~ 126 (142)
.
T Consensus 117 ~ 117 (137)
T cd03208 117 S 117 (137)
T ss_pred C
Confidence 3
No 34
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.60 E-value=6.6e-15 Score=89.19 Aligned_cols=76 Identities=16% Similarity=0.261 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhc
Q 040675 43 ELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSL 122 (142)
Q Consensus 43 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~ 122 (142)
.......++...++.||++|++++|++|+++|+|||++++.+.|+... + ....+|+|.+|+++|.++|+++++.
T Consensus 27 ~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~----~--~~~~~p~l~~w~~~~~~~p~~~~~~ 100 (103)
T cd03207 27 ARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF----G--LLPERPAFDAYIARITDRPAFQRAA 100 (103)
T ss_pred hhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc----C--CCCCChHHHHHHHHHHcCHHHHHHh
Confidence 455567789999999999999899999999999999999999887542 2 2368999999999999999999886
Q ss_pred CC
Q 040675 123 KD 124 (142)
Q Consensus 123 ~~ 124 (142)
..
T Consensus 101 ~~ 102 (103)
T cd03207 101 AI 102 (103)
T ss_pred cc
Confidence 53
No 35
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.60 E-value=6.8e-15 Score=91.05 Aligned_cols=79 Identities=20% Similarity=0.406 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHh
Q 040675 41 GEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSK 120 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~ 120 (142)
+...+.....+.+.++.||++|++++|++|+++|+|||++++++.++... . .+ .....+|+|.+|+++|.++|++++
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~-~-~~-~~~~~~p~l~~~~~~~~~~p~~~~ 116 (118)
T cd03187 40 EAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMAT-P-FA-KLFDSRPHVKAWWEDISARPAWKK 116 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHc-c-ch-hhhhcCchHHHHHHHHHhCHHHHh
Confidence 34456677899999999999999899999999999999999998876431 1 11 124679999999999999999987
Q ss_pred hc
Q 040675 121 SL 122 (142)
Q Consensus 121 ~~ 122 (142)
++
T Consensus 117 ~~ 118 (118)
T cd03187 117 VL 118 (118)
T ss_pred hC
Confidence 64
No 36
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.59 E-value=5.2e-15 Score=91.81 Aligned_cols=76 Identities=20% Similarity=0.266 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhc
Q 040675 43 ELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSL 122 (142)
Q Consensus 43 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~ 122 (142)
..+.....+.+.++.||++|++++|++|+++|+||+++++++.++... .+.+ ...+|+|.+|+++|.++|++++..
T Consensus 35 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~---~~~~-~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 35 PPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEAL---LPLD-LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHh---cCCC-hhhCchHHHHHHHHHcccchHHHH
Confidence 455667789999999999999889999999999999999999887531 2334 367999999999999999999854
No 37
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.58 E-value=9.6e-15 Score=87.51 Aligned_cols=95 Identities=16% Similarity=0.288 Sum_probs=72.5
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccccccchhhhhccChHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhH
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWVYNAGTKIWSLKGEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASL 80 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~ 80 (142)
++||++.-+ |+|.++.+++++++|+......+.. ...+++...++.+|++|++++|++|+++|+|||++
T Consensus 1 ~r~~~~~~~----~~~~~~~~~~~vd~~~d~~~~~l~~-------~~~~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l 69 (96)
T cd03200 1 ARFLYRLLG----PAPNAPNAATNIDSWVDTAIFQLAE-------GSSKEKAAVLRALNSALGRSPWLVGSEFTVADIVS 69 (96)
T ss_pred CchHHHHhc----ccCCCchHHHHHHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHHcCCCccCCCCCCHHHHHH
Confidence 578888844 9999999999999995421111111 13346667888999999999999999999999999
Q ss_pred HHHHHHHHHhHhhcCCcccccChHHHHHHHHHhc
Q 040675 81 IPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQ 114 (142)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~ 114 (142)
++.+.+. +.. ...+|+|.+|++||.+
T Consensus 70 ~~~l~~~-------~~~-~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 70 WCALLQT-------GLA-SAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHc-------ccc-cccChHHHHHHHHHHh
Confidence 9887642 222 3679999999999976
No 38
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=1.8e-14 Score=98.91 Aligned_cols=123 Identities=20% Similarity=0.338 Sum_probs=93.4
Q ss_pred CcccccccCC-CCCCCCCCHHHHHHhcccc-------ccc--hhhhh-----cc--ChHHHHHHHHHHHHHHHHHHHHhC
Q 040675 1 MQYVDEVWSD-KNPLLPSDSYQRAHARFWV-------YNA--GTKIW-----SL--KGEELETAKKEFIEIMKTLEAELG 63 (142)
Q Consensus 1 ~~YL~~~~~~-~~~l~p~~~~~~a~~~~~~-------~~~--~~~~~-----~~--~~~~~~~~~~~~~~~l~~le~~L~ 63 (142)
+.||+++|.. ...|+|.|+.+|+.+++|+ .+. ...++ +. ......+...++.+.++.+|.+|.
T Consensus 71 ~~Yl~~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~ 150 (226)
T KOG0867|consen 71 LRYLAEKYGPLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLK 150 (226)
T ss_pred HHHHHHHcCCCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHc
Confidence 3688888853 3349999999999999992 122 11111 22 244577888999999999999999
Q ss_pred CCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCCh
Q 040675 64 DKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDE 125 (142)
Q Consensus 64 ~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~ 125 (142)
++.|++|+++|+||+++.+.+..+.. .. ........+|++.+|++++.++|+.+++....
T Consensus 151 ~~~yl~g~~~tlADl~~~~~~~~~~~-~~-~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~~ 210 (226)
T KOG0867|consen 151 TQVYLAGDQLTLADLSLASTLSQFQG-KF-ATEKDFEKYPKVARWYERIQKRPAYEEANEKG 210 (226)
T ss_pred cCCcccCCcccHHHHHHhhHHHHHhH-hh-hhhhhhhhChHHHHHHHHHHhCccHHHHHHHH
Confidence 99999999999999999999987632 11 11223589999999999999999988766543
No 39
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.57 E-value=1.7e-14 Score=88.20 Aligned_cols=74 Identities=24% Similarity=0.328 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCC----------CcccCCCCChhHHhHHHHHHHHHHhHhhcCCcc----cccChHHH
Q 040675 41 GEELETAKKEFIEIMKTLEAELGDK----------SYFGGDNFGFVDASLIPFYCWFYSYETLGNFSI----ETECPKII 106 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~~----------~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~----~~~~p~l~ 106 (142)
.+..+....++...++.||++|+++ +|++|+++|+|||++++.+.|+..+ +.+. ...+|+|.
T Consensus 24 ~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l~ 99 (111)
T cd03204 24 VEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNLE 99 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHHH
Confidence 4457788899999999999999764 4999999999999999999987643 3332 25799999
Q ss_pred HHHHHHhccHHH
Q 040675 107 AWAKRCMQKETV 118 (142)
Q Consensus 107 ~~~~r~~~~p~~ 118 (142)
+|++||.+||+|
T Consensus 100 ~w~~rv~aRpsf 111 (111)
T cd03204 100 AYFERVLQRESF 111 (111)
T ss_pred HHHHHHHcCCCC
Confidence 999999999975
No 40
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.57 E-value=1.7e-14 Score=89.99 Aligned_cols=84 Identities=15% Similarity=0.289 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHh
Q 040675 41 GEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSK 120 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~ 120 (142)
....+.....+.+.++.||+.|++++|++|+++|+|||++++.+.++.... .+......+|++.+|++++.++|++++
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~--~~~~~~~~~p~l~~w~~~~~~~p~~~~ 112 (123)
T cd03181 35 KKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYV--FDKEWRAKYPNVTRWFNTVVNQPIFKA 112 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHH--cCHHHHHhChHHHHHHHHHHcCHHHHH
Confidence 344667788899999999999998999999999999999999998764321 111123679999999999999999999
Q ss_pred hcCChH
Q 040675 121 SLKDEK 126 (142)
Q Consensus 121 ~~~~~~ 126 (142)
++.+..
T Consensus 113 ~~~~~~ 118 (123)
T cd03181 113 VFGEVK 118 (123)
T ss_pred HcCCCC
Confidence 987754
No 41
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.57 E-value=2.8e-14 Score=89.42 Aligned_cols=78 Identities=23% Similarity=0.348 Sum_probs=64.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-hCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhc--cHH
Q 040675 41 GEELETAKKEFIEIMKTLEAE-LGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQ--KET 117 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~-L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~--~p~ 117 (142)
++..+.....+.+.+..+|++ +++++|++|+++|+|||++++.+.+.... +.+....+|+|.+|+++|.+ +|+
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~----~~~~~~~~p~l~~w~~~~~~~~~p~ 115 (126)
T cd03183 40 PEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAA----GYDVFEGRPKLAAWRKRVKEAGNPL 115 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhc----CCcccccCchHHHHHHHHHHhcchh
Confidence 445667778899999999998 45578999999999999999988766532 44334789999999999999 999
Q ss_pred HHhhc
Q 040675 118 VSKSL 122 (142)
Q Consensus 118 ~~~~~ 122 (142)
++++.
T Consensus 116 ~~~~~ 120 (126)
T cd03183 116 FDEAH 120 (126)
T ss_pred HHHHH
Confidence 99864
No 42
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.55 E-value=4.5e-14 Score=79.50 Aligned_cols=68 Identities=25% Similarity=0.473 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHH
Q 040675 42 EELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKR 111 (142)
Q Consensus 42 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r 111 (142)
...++....+.+.++.||++|++++|++|+++|+|||++++++.++..... +.+....+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCccccCHHHHHHHhC
Confidence 356788889999999999999999999999999999999999998876522 22345899999999986
No 43
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.51 E-value=1.1e-13 Score=84.58 Aligned_cols=71 Identities=18% Similarity=0.402 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHH
Q 040675 43 ELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETV 118 (142)
Q Consensus 43 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~ 118 (142)
..+....++.+.++.+|++|++++|++|+++|+|||++++++...... +.. ...+|+|.+|+++|.++|+|
T Consensus 40 ~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~----~~~-~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 40 AIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFEL----PIE-RPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHc----ccc-cccCchHHHHHHHHHhCCCC
Confidence 456678899999999999999889999999999999999988532221 223 47899999999999999975
No 44
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.51 E-value=1e-13 Score=83.62 Aligned_cols=71 Identities=21% Similarity=0.371 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHH
Q 040675 43 ELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETV 118 (142)
Q Consensus 43 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~ 118 (142)
..+....++.+.++.+|++|++++|++|+++|+|||++++++.+... .+.. ...+|+|.+|+++|.++|++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~-~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPE----GGVD-LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhc----cCCC-hhhCcHHHHHHHHHHhCcCC
Confidence 45667889999999999999999999999999999999998875432 1323 37899999999999999974
No 45
>PLN02907 glutamate-tRNA ligase
Probab=99.48 E-value=6.8e-14 Score=109.09 Aligned_cols=104 Identities=13% Similarity=0.236 Sum_probs=79.4
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccccccchhhhhccChHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhH
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFWVYNAGTKIWSLKGEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASL 80 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~ 80 (142)
++||++.++ .+.|+|.++.+++++++|+.-... +. . ...+...++.||.+|++++|++|+++|+|||++
T Consensus 56 l~YLa~~~p-~~~L~p~d~~erAqV~qWL~~~~~--~~-~-------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL 124 (722)
T PLN02907 56 LRYIARSAS-LPGFYGQDAFESSQVDEWLDYAPT--FS-S-------GSEFENACEYVDGYLASRTFLVGYSLTIADIAI 124 (722)
T ss_pred HHHHHHhCC-CcCCCCCCHHHHHHHHHHHHHHhh--cc-c-------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHH
Confidence 479999998 677999999999999999431100 00 0 124567899999999999999999999999999
Q ss_pred HHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHH
Q 040675 81 IPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKET 117 (142)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~ 117 (142)
++.+...... +.+......+|+|.+|+++|.++|+
T Consensus 125 ~~~L~~~~~~--~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 125 WSGLAGSGQR--WESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHhhhhh--hhcccccccCHHHHHHHHHHHhCCC
Confidence 9988654111 1122224789999999999999999
No 46
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.46 E-value=6.4e-13 Score=82.03 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhh
Q 040675 43 ELETAKKEFIEIMKTLEAELG-DKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKS 121 (142)
Q Consensus 43 ~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~ 121 (142)
..+.....+.+.+..+|..|+ +++|++| ++|+||+++++.+.|+... |.++ . |++.+|.+||.+||+|+++
T Consensus 39 ~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~----g~~l-~--p~l~ay~~r~~~rPa~~~~ 110 (114)
T cd03195 39 LSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLN----GDPV-P--ERLRDYARRQWQRPSVQAW 110 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHc----CCCC-C--HHHHHHHHHHHCCHHHHHH
Confidence 345667778888999999995 5589999 5999999999999988753 6665 3 9999999999999999997
Q ss_pred cC
Q 040675 122 LK 123 (142)
Q Consensus 122 ~~ 123 (142)
+.
T Consensus 111 ~~ 112 (114)
T cd03195 111 LA 112 (114)
T ss_pred Hh
Confidence 64
No 47
>PRK10387 glutaredoxin 2; Provisional
Probab=99.45 E-value=9.8e-14 Score=94.06 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHH
Q 040675 45 ETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVS 119 (142)
Q Consensus 45 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~ 119 (142)
+.....+++.|+.+|++|++ +|++|+++|+|||++++++.|+... .+. ..+|+|.+|++||.++|++.
T Consensus 141 ~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~~---~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 141 PGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLV---KGI---EWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceee---cCC---CCCHHHHHHHHHHHHHhCCC
Confidence 35567899999999999987 9999999999999999999887542 122 23699999999999999864
No 48
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.44 E-value=1.2e-12 Score=80.86 Aligned_cols=71 Identities=18% Similarity=0.354 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHh---CCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhh
Q 040675 45 ETAKKEFIEIMKTLEAEL---GDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKS 121 (142)
Q Consensus 45 ~~~~~~~~~~l~~le~~L---~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~ 121 (142)
+...+.+.+.+..+|..+ ++++|++|+ +|+||+++++++.|.... +.+. .|+|.+|+++|.++|+++++
T Consensus 40 ~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~----~~~~---~P~l~~~~~rv~~rPsv~~~ 111 (114)
T cd03194 40 EAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY----GLPL---SPAAQAYVDALLAHPAMQEW 111 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc----CCCC---CHHHHHHHHHHHCCHHHHHH
Confidence 344445555566665555 567899999 999999999999887542 3332 29999999999999999987
Q ss_pred cC
Q 040675 122 LK 123 (142)
Q Consensus 122 ~~ 123 (142)
+.
T Consensus 112 ~~ 113 (114)
T cd03194 112 IA 113 (114)
T ss_pred Hh
Confidence 64
No 49
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=2.7e-13 Score=91.07 Aligned_cols=118 Identities=18% Similarity=0.215 Sum_probs=88.8
Q ss_pred CcccccccCCCCCCCCCCHHHHHHhccc---cccch----hhhhcc----C-hHHHH-HHHHHHHHHHHHHHHHhC--CC
Q 040675 1 MQYVDEVWSDKNPLLPSDSYQRAHARFW---VYNAG----TKIWSL----K-GEELE-TAKKEFIEIMKTLEAELG--DK 65 (142)
Q Consensus 1 ~~YL~~~~~~~~~l~p~~~~~~a~~~~~---~~~~~----~~~~~~----~-~~~~~-~~~~~~~~~l~~le~~L~--~~ 65 (142)
++||+++|+ |.+.++.|++.++.+ +.+.. ...... . +...+ .......+.+..+++.|. ++
T Consensus 69 ~RyLArk~g----l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~s 144 (206)
T KOG1695|consen 69 LRYLARKFG----LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKS 144 (206)
T ss_pred HHHHHHHhC----cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCC
Confidence 479999999 999999999999998 22221 111111 1 22222 556678888999999997 34
Q ss_pred CcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcCCh
Q 040675 66 SYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDE 125 (142)
Q Consensus 66 ~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~ 125 (142)
.|++|+++|+||+.++..+..+... ...+....+|+|.++.++|.++|.+++++.+.
T Consensus 145 gflvGd~lT~aDl~i~e~l~~l~~~---~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r 201 (206)
T KOG1695|consen 145 GFLVGDKLTWADLVIAEHLDTLEEL---LDPSALDHFPKLKAFKERVSSIPNIKKYLESR 201 (206)
T ss_pred CeeecCcccHHHHHHHHHHHHHHHh---cCchhhccChHHHHHHHHHhcCchHHHHHhcC
Confidence 7999999999999999999866542 12233578899999999999999999988764
No 50
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.43 E-value=1.2e-12 Score=82.00 Aligned_cols=68 Identities=22% Similarity=0.449 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhc
Q 040675 44 LETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQ 114 (142)
Q Consensus 44 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~ 114 (142)
.+.....+...++.+|++|++++|++|+++|+|||++++++.+.... .+.+....+|+|.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV---SPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc---CcccccccCChHHHHHHHHhc
Confidence 45677789999999999999999999999999999999999887642 234445789999999999976
No 51
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.42 E-value=1.7e-12 Score=85.83 Aligned_cols=135 Identities=14% Similarity=0.231 Sum_probs=99.7
Q ss_pred cccccccCCCCCCCCCCHHHHHHhccccccchhhhhcc-ChHHHHHHHHHHHHHHHHHHHHhCC---CCcccCCCCChhH
Q 040675 2 QYVDEVWSDKNPLLPSDSYQRAHARFWVYNAGTKIWSL-KGEELETAKKEFIEIMKTLEAELGD---KSYFGGDNFGFVD 77 (142)
Q Consensus 2 ~YL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~---~~~l~G~~~t~aD 77 (142)
++|++.++ .+++---++.|.+.+-.-++..+..++.+ .+...+.....+.+.+..|+++|+. ++|+.|+++|.||
T Consensus 79 ~~Lee~l~-~p~~~~~~~~E~asag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aD 157 (221)
T KOG1422|consen 79 EFLEEKLP-PPKLPTLAPPESASAGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLAD 157 (221)
T ss_pred HHHHHhcC-CCCCcccCCHHHHhhHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeeh
Confidence 45677776 33322112444444433344445555433 3445566677888899999999975 6999999999999
Q ss_pred HhHHHHHHHHHHh-HhhcCCcccccChHHHHHHHHHhccHHHHhhcCChHHHHHHHHHHHH
Q 040675 78 ASLIPFYCWFYSY-ETLGNFSIETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFVLMLRK 137 (142)
Q Consensus 78 i~~~~~l~~~~~~-~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~~~~~~ 137 (142)
|++.|=|+-+++. .++.++++++.++.+.+|++.+.++.+|..+++.++.+..-|.....
T Consensus 158 csLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~~~~ 218 (221)
T KOG1422|consen 158 CSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAPVAK 218 (221)
T ss_pred hhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhhhhh
Confidence 9999999977654 34567888899999999999999999999999999998777766543
No 52
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.36 E-value=3.4e-12 Score=77.31 Aligned_cols=68 Identities=25% Similarity=0.389 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHh
Q 040675 41 GEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCM 113 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 113 (142)
++..+....++.+.++.+|+.|++++|++|+++|+|||++++++.++.. .+.+ ...+|+|.+|++++.
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~----~~~~-~~~~p~l~~~~~~~~ 105 (105)
T cd03179 38 AEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADE----GGFD-LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccc----cCCC-hHhCccHHHHHHhhC
Confidence 4556778889999999999999888999999999999999999987653 2444 478999999999874
No 53
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.34 E-value=3.6e-12 Score=77.19 Aligned_cols=68 Identities=21% Similarity=0.321 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCC--CCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcc-cccChHHHHHHHHH
Q 040675 41 GEELETAKKEFIEIMKTLEAELGD--KSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSI-ETECPKIIAWAKRC 112 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~-~~~~p~l~~~~~r~ 112 (142)
++..+...+.+.+.++.||++|++ ++|++|+++|+|||++++++.++... +... ...+|+|.+|+++|
T Consensus 34 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~----~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL----DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh----CchhhHHhChhHHHHHHhC
Confidence 345666778899999999999987 89999999999999999999887643 2222 47899999999875
No 54
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.34 E-value=3.5e-12 Score=76.72 Aligned_cols=66 Identities=18% Similarity=0.413 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCC--cccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhc
Q 040675 43 ELETAKKEFIEIMKTLEAELGDKS--YFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQ 114 (142)
Q Consensus 43 ~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~ 114 (142)
..+.....+.+.++.++++|++++ |++|++||+|||++++.+..+.. . ++.+.+|+|.+|++||.+
T Consensus 32 ~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~-----~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 32 SGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW-----A-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC-----C-HHTTTCHHHHHHHHHHHT
T ss_pred hHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh-----c-ccccccHHHHHHHHhhcC
Confidence 456677889999999999998776 99999999999999998854331 2 222689999999999974
No 55
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.34 E-value=7.9e-12 Score=74.66 Aligned_cols=70 Identities=29% Similarity=0.516 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHH
Q 040675 41 GEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRC 112 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~ 112 (142)
++..+...+.+.+.++.||++|++++|++|+++|+||+++++++.++.......+ ..+.+|++.+|+++|
T Consensus 31 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~--~~~~~p~l~~~~~~~ 100 (100)
T cd00299 31 EAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLG--LLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhh--hhccCccHHHHHHhC
Confidence 4456777889999999999999999999999999999999999998775422111 247899999999875
No 56
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.33 E-value=8.9e-12 Score=73.36 Aligned_cols=69 Identities=25% Similarity=0.279 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCC---cccccChHHHHHHHHHh
Q 040675 44 LETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNF---SIETECPKIIAWAKRCM 113 (142)
Q Consensus 44 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~---~~~~~~p~l~~~~~r~~ 113 (142)
......++.+.++.+|+.|++++|++|+++|+|||++++.+.++... ..... .....+|+|.+|++||.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYA-PLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhc-CCCChHHHHHHHhCcHHHHHHHHhC
Confidence 44667789999999999999999999999999999999999876532 01110 01367999999999973
No 57
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.28 E-value=5.6e-12 Score=85.64 Aligned_cols=67 Identities=12% Similarity=0.173 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccCh-HHHHHHHHHhccHHHH
Q 040675 45 ETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECP-KIIAWAKRCMQKETVS 119 (142)
Q Consensus 45 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p-~l~~~~~r~~~~p~~~ 119 (142)
+.....+++.++.+|++|++++|++| ++|+|||++++++.|+... .+ ..+| +|.+|++||.+++++.
T Consensus 140 ~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~---~~----~~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 140 PGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLV---AG----INWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeee---cC----CCCChHHHHHHHHHHHHhCCC
Confidence 35567889999999999999999965 6999999999999876532 11 1356 9999999999998763
No 58
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.27 E-value=3.3e-11 Score=82.26 Aligned_cols=94 Identities=19% Similarity=0.265 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHhCC----CCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHh
Q 040675 45 ETAKKEFIEIMKTLEAELGD----KSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSK 120 (142)
Q Consensus 45 ~~~~~~~~~~l~~le~~L~~----~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~ 120 (142)
.+..+.+...|+.+|..|.. .+|++|+.+|+||+++.+.|+++..+.-...+.-....|+|..|+.|+..|++|.+
T Consensus 204 kkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~k 283 (325)
T KOG4420|consen 204 KKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFRK 283 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHHH
Confidence 34556677777888888876 47999999999999999999988765211111114578999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHh
Q 040675 121 SLKDEKKVFEFVLMLRKR 138 (142)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~ 138 (142)
++.+.-.+..++..+++-
T Consensus 284 vlg~~fnilr~~~~~~kt 301 (325)
T KOG4420|consen 284 VLGDIFNILRFRLVKRKT 301 (325)
T ss_pred hhhhHHHHHHHHHHHhcC
Confidence 999977776666555543
No 59
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.12 E-value=1.9e-10 Score=72.19 Aligned_cols=71 Identities=18% Similarity=0.256 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh-HhhcCCc-ccccChHHHHHHHHHh
Q 040675 43 ELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSY-ETLGNFS-IETECPKIIAWAKRCM 113 (142)
Q Consensus 43 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~-~~~~~~~-~~~~~p~l~~~~~r~~ 113 (142)
..++......+.++.|+..|++++|++|+++|.+|+++++++.++... .+..+.. ....+|+|.+|++||.
T Consensus 54 ~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 356677788899999999999999999999999999999998765421 0000111 1478999999999983
No 60
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.11 E-value=5.1e-10 Score=67.14 Aligned_cols=67 Identities=19% Similarity=0.284 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHH
Q 040675 41 GEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRC 112 (142)
Q Consensus 41 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~ 112 (142)
++..+.....+.+.+..+|++|++++| +++|+|||++++.+.|..... .+.+....+|+|.+|+++|
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRH--PDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHc--cCcchhhhChHHHHHHHhC
Confidence 445777888999999999999998888 899999999999998875321 1223347899999999985
No 61
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1.1e-10 Score=80.38 Aligned_cols=120 Identities=18% Similarity=0.230 Sum_probs=88.9
Q ss_pred CCCCCCCHHHHHHhccc---cccch----hhhhc-cChHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHH
Q 040675 12 NPLLPSDSYQRAHARFW---VYNAG----TKIWS-LKGEELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPF 83 (142)
Q Consensus 12 ~~l~p~~~~~~a~~~~~---~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~ 83 (142)
..|+|.+ .|.+++.+ +++.+ ++.-+ ...+..++..+.+-..|+.||+.|+++.|++|+++|-||+-+++.
T Consensus 165 ~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftT 242 (324)
T COG0435 165 VDLYPEA--LRTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTT 242 (324)
T ss_pred cccCCHH--HHHHHHHHHhhhcccccCceeeecccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhhe
Confidence 4588854 45666555 44433 33322 336678888888889999999999999999999999999999999
Q ss_pred HHHHHHhHh-hcCCcc--cccChHHHHHHHHHhccHHHHhhcCChHHHHHHHH
Q 040675 84 YCWFYSYET-LGNFSI--ETECPKIIAWAKRCMQKETVSKSLKDEKKVFEFVL 133 (142)
Q Consensus 84 l~~~~~~~~-~~~~~~--~~~~p~l~~~~~r~~~~p~~~~~~~~~~~~~~~~~ 133 (142)
|.++..+.. ...++. ...||+|..|...+...|.|..+..=.+.-.-|+.
T Consensus 243 lvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~df~hIK~hYyr 295 (324)
T COG0435 243 LVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETVDFDHIKLHYYR 295 (324)
T ss_pred eEeecceEEeeeecccchhhcCchHHHHHHHHhcCcccccccchhHhhhhhee
Confidence 987764321 223333 46699999999999999999998876655444443
No 62
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.04 E-value=1.5e-09 Score=69.04 Aligned_cols=71 Identities=20% Similarity=0.348 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcC--C-cccccChHHHHHHHHHhc
Q 040675 43 ELETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGN--F-SIETECPKIIAWAKRCMQ 114 (142)
Q Consensus 43 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~--~-~~~~~~p~l~~~~~r~~~ 114 (142)
..++......+.++.|++.|++++|++|+++|.+|+.+++++..+... +... . .....+|+|.+|++||.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~-~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKA-PLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhc-cCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 356667788889999999999999999999999999999998754321 1100 0 014789999999999975
No 63
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.98 E-value=2.6e-09 Score=68.21 Aligned_cols=65 Identities=20% Similarity=0.294 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCC-cccccChHHHHHHHHHhc
Q 040675 46 TAKKEFIEIMKTLEAEL-GDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNF-SIETECPKIIAWAKRCMQ 114 (142)
Q Consensus 46 ~~~~~~~~~l~~le~~L-~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~-~~~~~~p~l~~~~~r~~~ 114 (142)
..+..+-..++.+-+.+ ++++|++|+++|+|||++++.+..+... .++ ++ ..+|+|.+|++||.+
T Consensus 79 D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~---~~~~Dl-~~~p~I~~W~eRm~~ 145 (149)
T cd03197 79 DVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGH---PAFKDM-VEETKIGEWYERMDA 145 (149)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHh---ccccch-hhCcCHHHHHHHHHH
Confidence 34455555555443444 4568999999999999999999766543 244 54 689999999999986
No 64
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=4.9e-10 Score=76.65 Aligned_cols=121 Identities=21% Similarity=0.187 Sum_probs=88.0
Q ss_pred CCCCCCCCHHHHHHhccc---cccc----hhhhhc-cChHHHHHHHHHHHHHHHHHHHHhCCCC--cccCCCCChhHHhH
Q 040675 11 KNPLLPSDSYQRAHARFW---VYNA----GTKIWS-LKGEELETAKKEFIEIMKTLEAELGDKS--YFGGDNFGFVDASL 80 (142)
Q Consensus 11 ~~~l~p~~~~~~a~~~~~---~~~~----~~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~aDi~~ 80 (142)
.-.|+|.+ .+++++.+ +++. ++++-+ ...+..+....++-..|+.+|+.|+++. |++|+++|-|||-+
T Consensus 162 ~lDL~P~~--L~~~Ide~N~wvy~~INNGVYk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirL 239 (319)
T KOG2903|consen 162 VLDLYPSS--LRAQIDETNSWVYDKINNGVYKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRL 239 (319)
T ss_pred ccccCCHH--HHHHHhhhhceecccccCceeeeccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheee
Confidence 34588865 56777665 5544 344322 3366777888888899999999998875 99999999999999
Q ss_pred HHHHHHHHHhH-hhcCCcc---cccChHHHHHHHHHhc-cHHHHhhcCChHHHHHHHH
Q 040675 81 IPFYCWFYSYE-TLGNFSI---ETECPKIIAWAKRCMQ-KETVSKSLKDEKKVFEFVL 133 (142)
Q Consensus 81 ~~~l~~~~~~~-~~~~~~~---~~~~p~l~~~~~r~~~-~p~~~~~~~~~~~~~~~~~ 133 (142)
++.+.++..+. ....++. ..+||+|..|...+.. .|+++.+..=.....-|+.
T Consensus 240 y~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~~~~Ttd~~hIk~~Y~~ 297 (319)
T KOG2903|consen 240 YTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPGFSSTTDFNHIKLHYYR 297 (319)
T ss_pred eeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHhhccchhhccchhHHhhhhcc
Confidence 99988765431 1223332 4699999999999988 8999998876655544443
No 65
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.90 E-value=2.9e-08 Score=60.12 Aligned_cols=98 Identities=20% Similarity=0.230 Sum_probs=63.9
Q ss_pred CHHHHHHhccc---cccch---------hhhhccC--hHHHHHHHHHHHHHHHHHHHHhCC-CCcccCCCCChhHHhHHH
Q 040675 18 DSYQRAHARFW---VYNAG---------TKIWSLK--GEELETAKKEFIEIMKTLEAELGD-KSYFGGDNFGFVDASLIP 82 (142)
Q Consensus 18 ~~~~~a~~~~~---~~~~~---------~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aDi~~~~ 82 (142)
|..+|+++|++ +...+ ...+.+. ....+.....+.+.+...+..|.. ++|++| +.||||..+.+
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFG-ewsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFG-EWSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTS-S--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCccc-cchHHHHHHHH
Confidence 46778888877 33322 2223322 233555666677778888888875 589998 89999999999
Q ss_pred HHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHHhhcC
Q 040675 83 FYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVSKSLK 123 (142)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~~~~~ 123 (142)
++.++... |.++ -+.+..|.++..++|+|++++.
T Consensus 80 ml~Rl~~~----gd~v---P~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 80 MLNRLVTY----GDPV---PERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHTT----T-------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHc----CCCC---CHHHHHHHHHHHCCHHHHHHHH
Confidence 99987642 4333 2689999999999999998764
No 66
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=98.26 E-value=1.5e-06 Score=59.97 Aligned_cols=69 Identities=17% Similarity=0.347 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcC--Cc-ccccChHHHHHHHHHhcc
Q 040675 45 ETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGN--FS-IETECPKIIAWAKRCMQK 115 (142)
Q Consensus 45 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~--~~-~~~~~p~l~~~~~r~~~~ 115 (142)
++..+-+.+-+..++..|++.+|+.|+++|-+|+.++.+|..+-. ++.. .+ +..++|+|..|++||.++
T Consensus 202 ~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y--P~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 202 AEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY--PFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec--cCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 345667788899999999999999999999999999999874322 2211 11 258899999999999864
No 67
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.85 E-value=6.9e-05 Score=50.20 Aligned_cols=71 Identities=21% Similarity=0.363 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCc---ccccChHHHHHHHHHhcc
Q 040675 44 LETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFS---IETECPKIIAWAKRCMQK 115 (142)
Q Consensus 44 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~---~~~~~p~l~~~~~r~~~~ 115 (142)
.+...+++.+.++.|+.+|+..+||.|+++|=+|-.++.++..+... ...+-. ..++|++|-++..||.+.
T Consensus 175 ~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt-~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 175 MDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTT-RLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhh-cCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 55677788899999999999999999999999999999988754322 111111 158899999999999864
No 68
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.83 E-value=0.00013 Score=45.95 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHH
Q 040675 44 LETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETV 118 (142)
Q Consensus 44 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~ 118 (142)
.+....+++..|..++..+.......| ++|+-||.++|.|.-+..+ .|..++ |+|.+|+++|.+.-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltiv---kgi~~P---~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIV---KGIQWP---PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTC---TTS------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhc---cCCcCC---HHHHHHHHHHHHHcCC
Confidence 456778899999999999985544444 9999999999999865443 354443 7999999999887554
No 69
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.60 E-value=0.00054 Score=42.86 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHH
Q 040675 45 ETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETV 118 (142)
Q Consensus 45 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~ 118 (142)
.....+++..|..++..+.... ..++++|+-||.++|.|.-+..+ .|..++ |+|.+|+++|.+.-.|
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~-~~n~~ls~DDi~lFp~LR~Lt~v---kgi~~P---~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSE-AVNGQLSTDDIILFPILRNLTLV---KGLVFP---PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCcc-ccCCcCCHHHHHHHHHHhhhhhh---cCCCCC---HHHHHHHHHHHHHhCC
Confidence 3566788888999999885433 35668999999999999865543 354443 7999999999876443
No 70
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=97.45 E-value=0.00051 Score=48.26 Aligned_cols=65 Identities=14% Similarity=0.240 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHh-CCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhc
Q 040675 47 AKKEFIEIMKTLEAEL-GDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQ 114 (142)
Q Consensus 47 ~~~~~~~~l~~le~~L-~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~ 114 (142)
.++.+-+.++..-..| .+++|+.|+++++||++++..+.-+..+..+. + .-...++..|+-+|.+
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afk--d-~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFK--D-CLQNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHH--H-HHhcchHHHHHHHHHH
Confidence 3445555565555566 45799999999999999999998655443221 2 2456889999999976
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.10 E-value=0.0028 Score=45.18 Aligned_cols=71 Identities=21% Similarity=0.286 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcc---cccChHHHHHHHHHhcc
Q 040675 44 LETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSI---ETECPKIIAWAKRCMQK 115 (142)
Q Consensus 44 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~---~~~~p~l~~~~~r~~~~ 115 (142)
.+.......+.+..+++.|++++|++|+++|--|+.++..+..+... +.+.-.+ ...++||.+|.+++.+.
T Consensus 161 e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~-~Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 161 EDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQV-ALPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhc-cCCchhHHHHHHhcchHHHHHHHHHHH
Confidence 34455677788999999999999999999999999999988753222 1111111 24489999999999763
No 72
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=95.81 E-value=0.0026 Score=48.60 Aligned_cols=70 Identities=10% Similarity=0.096 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHH
Q 040675 48 KKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVS 119 (142)
Q Consensus 48 ~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~ 119 (142)
...+...+..++.+|.-..|++|.++|+||++++..+.--....+. ....+.+-++.+|++-....++..
T Consensus 90 ~~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~--lk~~k~~~~v~Rw~~~~~~~~a~~ 159 (712)
T KOG1147|consen 90 FDEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQ--LKAKKDYQNVERWYDLPEFQEAHN 159 (712)
T ss_pred hHHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHH--HHhhCCchhhhhhcCcHhHHHHHH
Confidence 4467788889999998889999999999999999998732111110 011245678888888333333333
No 73
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=92.72 E-value=0.48 Score=31.22 Aligned_cols=37 Identities=27% Similarity=0.374 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCCC---CcccCCC-CChhHHhHHHHHHH
Q 040675 50 EFIEIMKTLEAELGDK---SYFGGDN-FGFVDASLIPFYCW 86 (142)
Q Consensus 50 ~~~~~l~~le~~L~~~---~~l~G~~-~t~aDi~~~~~l~~ 86 (142)
.-.+.+..|++.|++. .|+.|+. +|-+||.++..|.-
T Consensus 112 ~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l 152 (168)
T PF11801_consen 112 LAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLAL 152 (168)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHH
Confidence 3456778889999887 8999987 99999999998874
No 74
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=92.54 E-value=0.56 Score=31.22 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHH
Q 040675 45 ETAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETV 118 (142)
Q Consensus 45 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~ 118 (142)
.....++...++.++..+.+.. -....+++=||.+||.|.-+.. ..|+.++ .++..|+.+|.+...+
T Consensus 141 ~~~~~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~---v~gi~wp---s~v~dy~~~msektqV 207 (215)
T COG2999 141 AQYLKRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLTL---VAGIQWP---SRVADYRDNMSEKTQV 207 (215)
T ss_pred HHHHHHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhcccee---cccCCCc---HHHHHHHHHHHHhhCc
Confidence 3456778888888998887655 2334799999999999984432 2344443 4899999999876544
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=88.74 E-value=0.66 Score=32.02 Aligned_cols=59 Identities=15% Similarity=0.122 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHhccHHHH
Q 040675 52 IEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCMQKETVS 119 (142)
Q Consensus 52 ~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~~~p~~~ 119 (142)
...++.++.+|.+.+|..|.+++-+|+.++..+. ..+....+++..+|+..+.+.-...
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~---------~ep~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG---------VEPQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc---------cCcchhhhhHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999988753 1122456777888888877654443
No 76
>PRK15371 effector protein YopJ; Provisional
Probab=42.21 E-value=1.3e+02 Score=21.83 Aligned_cols=65 Identities=14% Similarity=0.236 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHh
Q 040675 46 TAKKEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCM 113 (142)
Q Consensus 46 ~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 113 (142)
...+++...+..||+.++++.|+ -+.++..|+-..|.+.-.... ..++.++ .-+..-..+++.+.
T Consensus 23 ~~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp~lv~~~N~-r~P~LNL-~~f~s~~~f~~aik 87 (287)
T PRK15371 23 ISNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMPALVAQANN-KYPEMNL-KLVTSPLDLSIEIK 87 (287)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhHHHHHHHhc-cCCCCCe-eecCCHHHHHHHHH
Confidence 45677999999999999988888 567899999999988743221 2334443 33333344444443
No 77
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=40.17 E-value=35 Score=17.17 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=18.4
Q ss_pred hHHHHHHHHHhccHHHHhhcCChH
Q 040675 103 PKIIAWAKRCMQKETVSKSLKDEK 126 (142)
Q Consensus 103 p~l~~~~~r~~~~p~~~~~~~~~~ 126 (142)
..+.++++++.+.|.++.-+....
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~~~~ 27 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLKACQ 27 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHHhcC
Confidence 457889999999999987555543
No 78
>KOG0489 consensus Transcription factor zerknullt and related HOX domain proteins [General function prediction only]
Probab=38.27 E-value=22 Score=25.21 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=28.1
Q ss_pred HHHHHHHHhccHHHHhhcCChHHHHHHHHHHHHhhcCC
Q 040675 105 IIAWAKRCMQKETVSKSLKDEKKVFEFVLMLRKRYGVE 142 (142)
Q Consensus 105 l~~~~~r~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (142)
..+|+.|-.-.+--...+-.+..++-+|+|+|-||+++
T Consensus 180 fN~YLtR~RRiEiA~~L~LtErQIKIWFQNRRMK~Kk~ 217 (261)
T KOG0489|consen 180 FNKYLTRSRRIEIAHALNLTERQIKIWFQNRRMKWKKE 217 (261)
T ss_pred cccccchHHHHHHHhhcchhHHHHHHHHHHHHHHHHHh
Confidence 45666666555555556677888999999999999864
No 79
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=34.53 E-value=43 Score=21.47 Aligned_cols=19 Identities=11% Similarity=0.211 Sum_probs=15.3
Q ss_pred cChHHHHHHHHHhccHHHH
Q 040675 101 ECPKIIAWAKRCMQKETVS 119 (142)
Q Consensus 101 ~~p~l~~~~~r~~~~p~~~ 119 (142)
..-.|..|++|+.++|.+.
T Consensus 110 rr~~LqrfL~RV~~hP~L~ 128 (140)
T cd06891 110 LKANLQRWFNRVCSDPILI 128 (140)
T ss_pred HHHHHHHHHHHHhCChhhc
Confidence 3467899999999999554
No 80
>TIGR03798 ocin_TIGR03798 bacteriocin propeptide, TIGR03798 family. This model describes a conserved, fairly long (about 65 residue) propeptide region for a family of putative microcins, that is, bacteriocins of small size. Members of the seed alignment tend to have the Gly-Gly motif as the last two residues of the matched region. This is a cleavage site for a combination processing/export ABC transporter with a peptidase domain.
Probab=32.77 E-value=48 Score=17.82 Aligned_cols=26 Identities=12% Similarity=0.241 Sum_probs=19.1
Q ss_pred hHHHHHHHHHhccHHHHhhcCChHHH
Q 040675 103 PKIIAWAKRCMQKETVSKSLKDEKKV 128 (142)
Q Consensus 103 p~l~~~~~r~~~~p~~~~~~~~~~~~ 128 (142)
..+.++++++.+.|.++.-+......
T Consensus 2 e~l~~Fl~~~~~d~~L~~~l~~~~~~ 27 (64)
T TIGR03798 2 EQLKAFLEKVKTDPDLREKLKAAEDP 27 (64)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHcCCH
Confidence 35788999999999998765554333
No 81
>PF12535 Nudix_N: Hydrolase of X-linked nucleoside diphosphate N terminal ; PDB: 3Q1P_B 3Q4I_B.
Probab=30.25 E-value=94 Score=16.56 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=14.3
Q ss_pred HHHHHHHHHhccHHHHhhcCChHHHHHHHHHHH
Q 040675 104 KIIAWAKRCMQKETVSKSLKDEKKVFEFVLMLR 136 (142)
Q Consensus 104 ~l~~~~~r~~~~p~~~~~~~~~~~~~~~~~~~~ 136 (142)
.+..|.+++.+.-.---+......-.+.|...+
T Consensus 3 ~~l~~a~~lqaiAqtGL~Yskd~yD~ERy~~lr 35 (58)
T PF12535_consen 3 KWLEWAKRLQAIAQTGLAYSKDPYDRERYEELR 35 (58)
T ss_dssp THHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhCCChhhHHHHHHHH
Confidence 344555555554444444444444444444443
No 82
>PF11479 Suppressor_P21: RNA silencing suppressor P21; InterPro: IPR021575 P21 is produced by Beet yellows virus to suppress the antiviral silencing response mounted by the host. P21 acts by binding directly to siRNA which is a mediator in the process. P21 has an octameric ring structure with a large central cavity []. ; PDB: 2CWO_B.
Probab=29.40 E-value=75 Score=19.90 Aligned_cols=35 Identities=17% Similarity=0.150 Sum_probs=11.8
Q ss_pred HHHHHHhccHHHHhhcCChHHHHHHHHHHHHhhcC
Q 040675 107 AWAKRCMQKETVSKSLKDEKKVFEFVLMLRKRYGV 141 (142)
Q Consensus 107 ~~~~r~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (142)
...++|+++|.-..-+..++++.+.++..++=+++
T Consensus 57 ehre~me~hp~qss~lr~psr~gemlkeiraflkv 91 (177)
T PF11479_consen 57 EHREWMEQHPNQSSKLRTPSRIGEMLKEIRAFLKV 91 (177)
T ss_dssp HHHHHT---------------HHHHHHHHHHHHCT
T ss_pred hhHHHHHhCccccccccCchHHHHHHHHHHHHhee
Confidence 44556666666555566666666666666655544
No 83
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=29.36 E-value=72 Score=16.86 Aligned_cols=30 Identities=13% Similarity=0.056 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCCcccCCCC-ChhHHhHHH
Q 040675 53 EIMKTLEAELGDKSYFGGDNF-GFVDASLIP 82 (142)
Q Consensus 53 ~~l~~le~~L~~~~~l~G~~~-t~aDi~~~~ 82 (142)
...+.|.+.+..+.|-.|+.+ |..+++---
T Consensus 4 ~i~~~l~~~I~~g~~~~g~~lps~~~la~~~ 34 (64)
T PF00392_consen 4 QIYDQLRQAILSGRLPPGDRLPSERELAERY 34 (64)
T ss_dssp HHHHHHHHHHHTTSS-TTSBE--HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCEeCCHHHHHHHh
Confidence 345566667777788888888 888776443
No 84
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=26.42 E-value=1.2e+02 Score=20.16 Aligned_cols=38 Identities=16% Similarity=0.348 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHH
Q 040675 49 KEFIEIMKTLEAELGDKSYFGGDNFGFVDASLIPFYCWF 87 (142)
Q Consensus 49 ~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~ 87 (142)
+.+......+++.+..++|+ .+.++..|+-+.|.+.-.
T Consensus 2 ~~L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv~~ 39 (177)
T PF03421_consen 2 ESLKEYIERLEDDIKNGSWP-NESYAELDIKMLPALVAA 39 (177)
T ss_pred hHHHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHHHH
Confidence 35667788889999988888 778999999999998743
No 85
>PF12643 MazG-like: MazG-like family
Probab=26.32 E-value=1.1e+02 Score=18.28 Aligned_cols=56 Identities=11% Similarity=-0.021 Sum_probs=26.4
Q ss_pred ChhHHhHHHHHHHHHHhHhhcCCcccccChHHH-HHHHHHhccHHHHhhcCChHHHHHHHHH
Q 040675 74 GFVDASLIPFYCWFYSYETLGNFSIETECPKII-AWAKRCMQKETVSKSLKDEKKVFEFVLM 134 (142)
Q Consensus 74 t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~-~~~~r~~~~p~~~~~~~~~~~~~~~~~~ 134 (142)
++||+..++.+. . ...|+++..--..+. +.-....+-|.+.+...+-+.+..++++
T Consensus 40 eLAdvii~~ylL-a----~rLGid~~~lD~~i~~KL~~~~~k~~~~Ek~~gdls~l~~~l~~ 96 (98)
T PF12643_consen 40 ELADVIIYCYLL-A----DRLGIDFRELDEIIKEKLKKNIEKYPVLEKWYGDLSKLEQHLKK 96 (98)
T ss_pred HHHHHHHHHHHH-H----HHhCCCHHHHHHHHHHHHHhcccccchHHHHhccHHHHHHHHhc
Confidence 677777776653 1 113555210011122 2222223445556666666666666543
No 86
>PF10990 DUF2809: Protein of unknown function (DUF2809); InterPro: IPR021257 Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.
Probab=26.00 E-value=57 Score=19.15 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=15.0
Q ss_pred CcccCCCCChhHHhHHHH
Q 040675 66 SYFGGDNFGFVDASLIPF 83 (142)
Q Consensus 66 ~~l~G~~~t~aDi~~~~~ 83 (142)
..+.|+.++..|+.++..
T Consensus 71 ~lvLG~~F~w~Dll~Y~i 88 (91)
T PF10990_consen 71 RLVLGSTFDWWDLLAYAI 88 (91)
T ss_pred HhhcCCCCCHHHHHHHHH
Confidence 358899999999988753
No 87
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=25.51 E-value=1.4e+02 Score=17.01 Aligned_cols=43 Identities=14% Similarity=0.299 Sum_probs=27.4
Q ss_pred CCcccCCCCChhHHhHHHHHHHHHHhHhhcCCcccccChHHHHHHHHHh
Q 040675 65 KSYFGGDNFGFVDASLIPFYCWFYSYETLGNFSIETECPKIIAWAKRCM 113 (142)
Q Consensus 65 ~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 113 (142)
-+|+. .+++ |+..|+.+.++.... .....++--++..|.+++.
T Consensus 34 ~ky~t--~l~~-DvL~~~ll~~L~~~~---r~~~k~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 34 LKYFT--DLGY-DVLTFCLLERLSNPG---RSRLKDDGTNISQWLQSLA 76 (77)
T ss_pred Hhhcc--hhhH-HHHHHHHHHHHhccc---chhcCcCCCCHHHHHHHHh
Confidence 35663 4555 999999998765311 1122345578999998874
No 88
>COG4902 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.04 E-value=94 Score=20.22 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=24.2
Q ss_pred ccHHHHhhcCChHHHHHHHHHHHHhhcC
Q 040675 114 QKETVSKSLKDEKKVFEFVLMLRKRYGV 141 (142)
Q Consensus 114 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (142)
..|-|+....++..+++..+...+||+.
T Consensus 76 ~l~IF~nIA~SEQ~HmDAVk~LlekYnv 103 (189)
T COG4902 76 NLPIFRNIAASEQEHMDAVKSLLEKYNV 103 (189)
T ss_pred CcHHHHHHHHhHHHHHHHHHHHHHHcCC
Confidence 4677888888999999999999999985
No 89
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=21.87 E-value=2.8e+02 Score=20.32 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhCCCC--cccCCCCChhHHhHHHHHHHHH
Q 040675 50 EFIEIMKTLEAELGDKS--YFGGDNFGFVDASLIPFYCWFY 88 (142)
Q Consensus 50 ~~~~~l~~le~~L~~~~--~l~G~~~t~aDi~~~~~l~~~~ 88 (142)
++.+.+..||..-...+ --.|.++|+||+....-..-++
T Consensus 73 ~L~~~~~~Le~ik~~~~~~~~~~~~vS~ADLivLaG~vAiE 113 (297)
T cd08200 73 ELAKVLAVLEGIQKEFNESQSGGKKVSLADLIVLGGCAAVE 113 (297)
T ss_pred HHHHHHHHHHHHHHHhcccccCCccccHHHHHHHHhHHHHH
Confidence 35566666665543311 1235679999997775544333
No 90
>PF09968 DUF2202: Uncharacterized protein domain (DUF2202); InterPro: IPR019243 This domain, found in various hypothetical archaeal proteins, has no known function.; PDB: 3Q4O_A 3Q4Q_A 3Q4R_A 3Q4N_A.
Probab=21.53 E-value=1.6e+02 Score=19.40 Aligned_cols=27 Identities=19% Similarity=0.361 Sum_probs=22.0
Q ss_pred cHHHHhhcCChHHHHHHHHHHHHhhcC
Q 040675 115 KETVSKSLKDEKKVFEFVLMLRKRYGV 141 (142)
Q Consensus 115 ~p~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (142)
.|.|.....++..|++.++....|||.
T Consensus 28 ~~~F~NIa~SEq~Hmdav~~Ll~kY~l 54 (162)
T PF09968_consen 28 LPIFNNIARSEQRHMDAVKALLEKYGL 54 (162)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ChHhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 666788888899999999999999985
No 91
>PF10653 Phage-A118_gp45: Protein gp45 of Bacteriophage A118; InterPro: IPR018915 The proteins in this entry represents Gp45 in Listeria phage A118 (Bacteriophage A118) and related proteins; Gp45 is thought to have a function in the phage tail-fibre system.
Probab=20.20 E-value=1.5e+02 Score=15.41 Aligned_cols=28 Identities=7% Similarity=0.267 Sum_probs=15.9
Q ss_pred HHHHhccHHHHhhcC----ChHHHHHHHHHHH
Q 040675 109 AKRCMQKETVSKSLK----DEKKVFEFVLMLR 136 (142)
Q Consensus 109 ~~r~~~~p~~~~~~~----~~~~~~~~~~~~~ 136 (142)
...|.++|+|++-++ ..+.+.+|++.++
T Consensus 22 rtkmianpaf~qkiplietgcekm~dyieelk 53 (62)
T PF10653_consen 22 RTKMIANPAFQQKIPLIETGCEKMTDYIEELK 53 (62)
T ss_pred hHHHhcCHHHHhccchhhhhhHHHHHHHHHHh
Confidence 455667777776543 2445556655543
Done!