Query 040679
Match_columns 199
No_of_seqs 115 out of 873
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 10:42:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040679.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040679hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01614 PME_inhib pectineste 100.0 6.1E-33 1.3E-37 219.4 18.8 176 1-188 1-177 (178)
2 PLN02314 pectinesterase 100.0 2.5E-32 5.5E-37 249.3 17.7 158 28-190 69-235 (586)
3 smart00856 PMEI Plant invertas 100.0 1.1E-31 2.4E-36 205.8 16.4 146 27-184 2-148 (148)
4 PLN02468 putative pectinestera 100.0 7.6E-32 1.7E-36 245.1 17.5 155 28-190 63-218 (565)
5 PLN02484 probable pectinestera 100.0 1.3E-31 2.8E-36 244.3 17.1 155 28-190 72-228 (587)
6 PLN02217 probable pectinestera 100.0 1.8E-31 3.9E-36 244.9 16.9 156 29-190 53-209 (670)
7 PLN02313 Pectinesterase/pectin 100.0 4.7E-31 1E-35 240.8 19.0 160 28-190 58-221 (587)
8 PLN02995 Probable pectinestera 100.0 9.1E-31 2E-35 236.7 19.2 157 29-192 34-194 (539)
9 PLN02990 Probable pectinestera 100.0 6.9E-31 1.5E-35 238.9 18.1 159 28-190 52-211 (572)
10 PLN02708 Probable pectinestera 100.0 6.4E-30 1.4E-34 232.0 18.6 151 27-189 42-196 (553)
11 PLN02713 Probable pectinestera 100.0 6.7E-30 1.5E-34 232.2 18.6 155 28-187 31-188 (566)
12 PLN02745 Putative pectinestera 100.0 1E-29 2.2E-34 232.1 18.5 151 30-190 80-233 (596)
13 PLN02197 pectinesterase 100.0 1.1E-29 2.3E-34 231.1 17.5 155 29-190 38-192 (588)
14 PLN02416 probable pectinestera 100.0 2.5E-29 5.3E-34 227.6 19.8 155 28-190 37-193 (541)
15 PLN02301 pectinesterase/pectin 100.0 1.5E-29 3.3E-34 228.8 18.1 156 25-192 46-204 (548)
16 PLN02506 putative pectinestera 100.0 2.4E-29 5.2E-34 227.2 18.3 158 28-190 33-193 (537)
17 PF04043 PMEI: Plant invertase 100.0 5.3E-29 1.1E-33 191.2 14.9 146 28-184 3-152 (152)
18 PLN03043 Probable pectinestera 100.0 1.8E-28 4E-33 222.0 16.7 154 33-187 3-156 (538)
19 PLN02698 Probable pectinestera 100.0 5.9E-28 1.3E-32 216.9 16.5 156 26-190 19-178 (497)
20 PLN02201 probable pectinestera 99.9 1E-23 2.2E-28 189.9 16.1 126 59-189 37-164 (520)
21 PLN02933 Probable pectinestera 99.9 4.9E-23 1.1E-27 185.4 18.2 126 58-190 50-183 (530)
22 PLN02488 probable pectinestera 99.9 1.8E-22 4E-27 180.0 14.8 152 33-192 2-163 (509)
23 PLN02170 probable pectinestera 99.8 1.1E-20 2.5E-25 169.8 14.0 130 39-192 57-188 (529)
24 PLN02916 pectinesterase family 99.7 1.5E-16 3.3E-21 142.7 11.3 87 93-190 56-142 (502)
25 PF07870 DUF1657: Protein of u 80.1 12 0.00025 23.3 6.6 45 68-117 3-47 (50)
26 KOG1733 Mitochondrial import i 68.1 40 0.00086 23.8 7.3 55 65-121 26-85 (97)
27 PF02953 zf-Tim10_DDP: Tim10/D 48.6 63 0.0014 20.7 5.0 30 92-121 35-64 (66)
28 PF01093 Clusterin: Clusterin; 36.3 77 0.0017 28.8 5.1 62 98-159 42-108 (436)
29 PF14290 DUF4370: Domain of un 34.6 2.1E+02 0.0047 23.3 6.8 61 99-160 130-190 (239)
30 PF08287 DASH_Spc19: Spc19; I 34.0 1.3E+02 0.0029 23.1 5.5 24 102-125 2-25 (153)
31 PLN02749 Uncharacterized prote 33.6 2.3E+02 0.0049 22.0 7.2 61 99-160 64-124 (173)
32 COG2205 KdpD Osmosensitive K+ 29.8 3.3E+02 0.0072 27.1 8.4 103 94-197 619-733 (890)
33 PF08194 DIM: DIM protein; In 28.1 41 0.00089 19.5 1.3 19 1-19 1-19 (36)
34 PF10792 DUF2605: Protein of u 26.4 2.5E+02 0.0053 20.1 5.4 55 135-191 16-70 (98)
35 KOG4841 Dolichol-phosphate man 26.1 58 0.0013 22.7 2.0 26 100-125 65-90 (95)
36 PF11172 DUF2959: Protein of u 25.8 3.6E+02 0.0079 21.8 7.4 51 35-87 6-57 (201)
37 KOG4514 Uncharacterized conser 23.5 3.9E+02 0.0085 21.5 6.9 24 99-122 156-179 (222)
38 TIGR01601 PYST-C1 Plasmodium y 21.1 34 0.00075 23.4 0.2 16 2-17 3-20 (82)
39 PF08285 DPM3: Dolichol-phosph 20.2 80 0.0017 22.2 1.9 25 101-125 62-86 (91)
No 1
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=6.1e-33 Score=219.39 Aligned_cols=176 Identities=38% Similarity=0.570 Sum_probs=154.2
Q ss_pred CchhHHHHHHHHHHHhhhccCCCCCCCcchHHhccCCCCCChhhHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHH
Q 040679 1 MLRLCSLITLFLLLSCSAAGSKHGHGEPHDLVRSSCAHASYPAVCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSA 79 (199)
Q Consensus 1 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~C~~T~~p~~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~ 79 (199)
|.+.++++.|+|++++....+.-....++..|+.+|++|+||++|+++|.++|++.. |+.+++.++++.+..+++.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~ 80 (178)
T TIGR01614 1 MASSLSLLLFLLLLSLVATSSSNSLNATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLD 80 (178)
T ss_pred CchhHHHHHHHHHHcccccccccCCcchHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888777654311111346789999999999999999999999998877 9999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccC
Q 040679 80 YLSQVSSNVNKGKSTNKRERLALSDCVEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDV 159 (199)
Q Consensus 80 ~i~~l~~~~~~~~~~~~~~~~al~dC~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~ 159 (199)
++.++... ..++..+.++++|.++|++++++|++++++++.. .++|+++|||+|+++++||+|||.+.
T Consensus 81 ~i~~l~~~-----~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~~-------~~~d~~~~ls~a~~~~~tC~d~f~~~ 148 (178)
T TIGR01614 81 HISKLLLT-----KGDPRDKSALEDCVELYSDAVDALDKALASLKSK-------DYSDAETWLSSALTDPSTCEDGFEEL 148 (178)
T ss_pred HHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------chhHHHHHHHHHHcccchHHHHhccC
Confidence 99999764 3378899999999999999999999999999743 58999999999999999999999987
Q ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHhcc
Q 040679 160 DSKVKSDVKRKISNVARVTSNALYMLTRL 188 (199)
Q Consensus 160 ~~~~~~~v~~~~~~~~~L~snaLaiv~~~ 188 (199)
++..+++|...++++.+|++|+|+|++++
T Consensus 149 ~~~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 149 GGIVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 65567899999999999999999999875
No 2
>PLN02314 pectinesterase
Probab=100.00 E-value=2.5e-32 Score=249.31 Aligned_cols=158 Identities=24% Similarity=0.530 Sum_probs=139.0
Q ss_pred cchHHhccCCCCCChhhHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPAVCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCV 106 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~ 106 (199)
+...|+.+|+.|+||++|+++|.++|.+.. +|++|+++++++++++++++...++.+... ..++.++.|++||.
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~-----~~~~~~k~AL~DC~ 143 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINE-----TNDERLKSALRVCE 143 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCHHHHHHHHHHH
Confidence 456999999999999999999999998777 999999999999999999999999988753 56889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCc--ccccchhhHHHHHHhhcccchHhhccccC------CchhhhhHHHHHHHHHHHH
Q 040679 107 EQISDSVEDLSKTLNELKHLKGDT--FSWQMSNAETWVSSALTDEDTCLDGFEDV------DSKVKSDVKRKISNVARVT 178 (199)
Q Consensus 107 el~~~a~~~L~~a~~~l~~~~~~~--~~~~~~d~~twLSAAlt~~~TC~dgf~~~------~~~~~~~v~~~~~~~~~L~ 178 (199)
|+|++++++|++++++|....... ..+.++|++||||||||||+||+|||.+. ++.++..|...+.++.+|+
T Consensus 144 EllddAid~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLt 223 (586)
T PLN02314 144 TLFDDAIDRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFT 223 (586)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHH
Confidence 999999999999999996443211 14577999999999999999999999865 3467788888999999999
Q ss_pred HHHHHHHhcccC
Q 040679 179 SNALYMLTRLDK 190 (199)
Q Consensus 179 snaLaiv~~~~~ 190 (199)
||+|||++++..
T Consensus 224 SNaLAIi~~l~~ 235 (586)
T PLN02314 224 SNSLAIVSKILG 235 (586)
T ss_pred HHHHHHHhhhcc
Confidence 999999998664
No 3
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=1.1e-31 Score=205.77 Aligned_cols=146 Identities=41% Similarity=0.710 Sum_probs=134.8
Q ss_pred CcchHHhccCCCCCChhhHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHH
Q 040679 27 EPHDLVRSSCAHASYPAVCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDC 105 (199)
Q Consensus 27 ~~~~~v~~~C~~T~~p~~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC 105 (199)
.+...|+.+|++|+||++|+++|.++|++.. |+.++++++|+.++.++..+..++.++.+. ..++..+.++++|
T Consensus 2 ~~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~-----~~~~~~~~al~~C 76 (148)
T smart00856 2 PTSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLKK-----TKDPRLKAALKDC 76 (148)
T ss_pred CHHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCHHHHHHHHHH
Confidence 3578899999999999999999999998877 999999999999999999999999998763 5688999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHH
Q 040679 106 VEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYM 184 (199)
Q Consensus 106 ~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLai 184 (199)
.++|+.++++|++++.+++.. .++|+++|||+|++|++||+|||.+.++.++++|...+.++.+|++|+|+|
T Consensus 77 ~~~y~~a~~~L~~a~~~l~~~-------~~~d~~~~lsaa~t~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 77 LELYDDAVDSLEKALEELKSG-------DYDDVATWLSAALTDQDTCLDGFEENDDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-------chhHHHHHHHHHhcCcchHHhHhccCCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999753 489999999999999999999998866678899999999999999999986
No 4
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=7.6e-32 Score=245.08 Aligned_cols=155 Identities=26% Similarity=0.408 Sum_probs=135.7
Q ss_pred cchHHhccCCCCCChhhHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPAVCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCV 106 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~ 106 (199)
++..|+.+|..|+||++|+++|.++|.+.. +|++|++++++++++++.++...+..+.... +..++.++.|++||.
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~---~~~d~~~k~AL~DC~ 139 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFL---GVKDNMTNAALNACQ 139 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---ccCChHHHHHHHHHH
Confidence 346899999999999999999999998766 9999999999999999999988877775420 245788999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHHh
Q 040679 107 EQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYMLT 186 (199)
Q Consensus 107 el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv~ 186 (199)
|+|++++++|++++.++..... .+.++|++||||||||||+||+|||.+. .++++|...+.++.+|+||+|||++
T Consensus 140 ELlddaid~L~~Sl~~l~~~~~---~~~~dDl~TWLSAAlTnq~TClDGF~e~--~vk~~~~~~l~n~~eLtSNaLAIi~ 214 (565)
T PLN02468 140 ELLDLAIDNLNNSLTSSGGVSV---LDNVDDLRTWLSSAGTYQETCIDGLAEP--NLKSFGENHLKNSTELTSNSLAIIT 214 (565)
T ss_pred HHHHHHHHHHHHHHHHHhcccc---ccchHHHHHHHHHHhcchhhhhhhhccc--CchHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999964321 3467999999999999999999999874 4788999999999999999999999
Q ss_pred cccC
Q 040679 187 RLDK 190 (199)
Q Consensus 187 ~~~~ 190 (199)
.+..
T Consensus 215 ~l~~ 218 (565)
T PLN02468 215 WIGK 218 (565)
T ss_pred cccc
Confidence 8554
No 5
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=1.3e-31 Score=244.27 Aligned_cols=155 Identities=28% Similarity=0.537 Sum_probs=135.8
Q ss_pred cchHHhccCCCCCChhhHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPAVCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCV 106 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~ 106 (199)
+...|+.+|+.|+||++|+++|.++|.+.. +|++|++++++++++++.++......+.. ...+++++.|++||+
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~-----~~~~~r~k~AL~DCl 146 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISY-----VQMPPRVRSAYDSCL 146 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----ccCCHHHHHHHHHHH
Confidence 446899999999999999999999998766 99999999999999999987766544433 256789999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCC-chhhhhHHHHHHHHHHHHHHHHHHH
Q 040679 107 EQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVD-SKVKSDVKRKISNVARVTSNALYML 185 (199)
Q Consensus 107 el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~-~~~~~~v~~~~~~~~~L~snaLaiv 185 (199)
|+|++++++|++++.+|..... .+.++|++||||||||||+||+|||.+.+ ++++++|.+.+.++.+|+||+|||+
T Consensus 147 ELlddAid~L~~Sl~~l~~~~~---~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi 223 (587)
T PLN02484 147 ELLDDSVDALSRALSSVVPSSG---GGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIF 223 (587)
T ss_pred HHHHHHHHHHHHHHHHHhcccc---ccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999975321 24679999999999999999999998763 5688999999999999999999999
Q ss_pred hcccC
Q 040679 186 TRLDK 190 (199)
Q Consensus 186 ~~~~~ 190 (199)
+.+..
T Consensus 224 ~~~~~ 228 (587)
T PLN02484 224 SASNG 228 (587)
T ss_pred hcccc
Confidence 99775
No 6
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.8e-31 Score=244.92 Aligned_cols=156 Identities=23% Similarity=0.468 Sum_probs=136.1
Q ss_pred chHHhccCCCCCChhhHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHH
Q 040679 29 HDLVRSSCAHASYPAVCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCVE 107 (199)
Q Consensus 29 ~~~v~~~C~~T~~p~~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~e 107 (199)
.+.|+.+|+.|+||++|+++|.+++ ... +|++|++++|+++++++.++...+..+... ..+++++.|++||.|
T Consensus 53 ~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~-----~~~~r~k~AL~DClE 126 (670)
T PLN02217 53 VKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIEL-----QKDPRTKMALDQCKE 126 (670)
T ss_pred HHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCChHHHHHHHHHHH
Confidence 3489999999999999999999988 444 999999999999999999999888888542 457789999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHHhc
Q 040679 108 QISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYMLTR 187 (199)
Q Consensus 108 l~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv~~ 187 (199)
+|++++|+|++++++|...+...+....+|++||||||||||+||+|||.+.++.+++.|...++++.+|+||+|||+++
T Consensus 127 LlddAvDeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~~ 206 (670)
T PLN02217 127 LMDYAIGELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVSE 206 (670)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999997432222234579999999999999999999998766678889999999999999999999998
Q ss_pred ccC
Q 040679 188 LDK 190 (199)
Q Consensus 188 ~~~ 190 (199)
+..
T Consensus 207 lss 209 (670)
T PLN02217 207 MSN 209 (670)
T ss_pred ccc
Confidence 654
No 7
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=4.7e-31 Score=240.84 Aligned_cols=160 Identities=25% Similarity=0.488 Sum_probs=138.8
Q ss_pred cchHHhccCCCCCChhhHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPAVCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCV 106 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~ 106 (199)
++..|+.+|+.|+||++|+++|.+.|.+.. +|.+|++++|++++++++++...++.+.... ++.+++++.|++||+
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~---~~l~~r~k~AL~DCl 134 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKR---KGLTPREVTALHDCL 134 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---ccCCHHHHHHHHHHH
Confidence 456899999999999999999999887666 9999999999999999999999999886531 246888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCC-CcccccchhhHHHHHHhhcccchHhhccccC--CchhhhhHHHHHHHHHHHHHHHHH
Q 040679 107 EQISDSVEDLSKTLNELKHLKG-DTFSWQMSNAETWVSSALTDEDTCLDGFEDV--DSKVKSDVKRKISNVARVTSNALY 183 (199)
Q Consensus 107 el~~~a~~~L~~a~~~l~~~~~-~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~--~~~~~~~v~~~~~~~~~L~snaLa 183 (199)
|+|++++++|++++.++..... +.+.++.+|++||||||||||+||+|||.+. ++.+++.|...+.++.+|+||+||
T Consensus 135 ELlddavD~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALA 214 (587)
T PLN02313 135 ETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALA 214 (587)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999975321 2233467999999999999999999999743 246788999999999999999999
Q ss_pred HHhcccC
Q 040679 184 MLTRLDK 190 (199)
Q Consensus 184 iv~~~~~ 190 (199)
|++.+..
T Consensus 215 Iv~~~~~ 221 (587)
T PLN02313 215 MIKNMTE 221 (587)
T ss_pred HHhcccc
Confidence 9998764
No 8
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=9.1e-31 Score=236.74 Aligned_cols=157 Identities=22% Similarity=0.391 Sum_probs=130.2
Q ss_pred chHHhccCCCCCChhhHHHHhccccCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 040679 29 HDLVRSSCAHASYPAVCLRTLSSYKGAAE--TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCV 106 (199)
Q Consensus 29 ~~~v~~~C~~T~~p~~C~~~L~~~p~s~~--~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~ 106 (199)
...|+.+|..|.||++|+++|.++|.+.. ++.++++++++.++.++.++...+..+.+. ..++.++.|++||.
T Consensus 34 ~~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~-----~~~~r~~~AL~DC~ 108 (539)
T PLN02995 34 STDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSGKN-----CTDFKKQAVLADCI 108 (539)
T ss_pred hHHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cCCHHHHHHHHHHH
Confidence 45899999999999999999999887533 789999999999999999999999888542 46788899999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHH--HHHHHHHHHHHHH
Q 040679 107 EQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKI--SNVARVTSNALYM 184 (199)
Q Consensus 107 el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~--~~~~~L~snaLai 184 (199)
|+|++++|+|++++++++........+.++|++|||||||||++||+|||.+.+ ++..+...+ .++.+|++|+|||
T Consensus 109 ELl~DAvD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~--~~~~v~~~v~~~~~~~ltSNaLAi 186 (539)
T PLN02995 109 DLYGDTIMQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLN--VSDFITPIVSNTKISHLISNCLAV 186 (539)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhcccc--chhhhhhhhhhhhHHHHHHHHHHH
Confidence 999999999999999997532211123468999999999999999999998754 333444444 6799999999999
Q ss_pred HhcccCCC
Q 040679 185 LTRLDKSR 192 (199)
Q Consensus 185 v~~~~~~~ 192 (199)
++.+....
T Consensus 187 ~~~l~~~~ 194 (539)
T PLN02995 187 NGALLTAG 194 (539)
T ss_pred hhhhcccc
Confidence 99876544
No 9
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6.9e-31 Score=238.92 Aligned_cols=159 Identities=23% Similarity=0.412 Sum_probs=136.5
Q ss_pred cchHHhccCCCCCChhhHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPAVCLRTLSS-YKGAAETPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCV 106 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~~C~~~L~~-~p~s~~~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~ 106 (199)
++..|+.+|+.|+||++|+++|.+ .|. ..+|.+|+++++++++++++++......+.... ++.+++++.|++||.
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~-~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~---~~~~~r~k~Al~DC~ 127 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD-STQPLDLIKLGFNVTIRSINDSIKKASGELKAK---AANDPETKGALELCE 127 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---cCCCHHHHHHHHHHH
Confidence 345899999999999999999998 443 239999999999999999999988887775320 357889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHHh
Q 040679 107 EQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYMLT 186 (199)
Q Consensus 107 el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv~ 186 (199)
|+|++++++|++++++|...+...+.+.++|++||||||||||+||+|||.+.++++++.|...+.++.+|+||+|||++
T Consensus 128 ELlddAvdeL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv~ 207 (572)
T PLN02990 128 KLMNDATDDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMIT 207 (572)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999754333334467999999999999999999999876667888999999999999999999999
Q ss_pred cccC
Q 040679 187 RLDK 190 (199)
Q Consensus 187 ~~~~ 190 (199)
++..
T Consensus 208 ~~~~ 211 (572)
T PLN02990 208 NISN 211 (572)
T ss_pred hhhc
Confidence 8665
No 10
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6.4e-30 Score=232.04 Aligned_cols=151 Identities=23% Similarity=0.406 Sum_probs=128.0
Q ss_pred CcchHHhccCCCCCChhhHHHHhccccC-CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHH
Q 040679 27 EPHDLVRSSCAHASYPAVCLRTLSSYKG-AAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSD 104 (199)
Q Consensus 27 ~~~~~v~~~C~~T~~p~~C~~~L~~~p~-s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~d 104 (199)
.+...|+..|+.|+||++|+++|.+++. ... +|.++++++|+++++++.++...++.+... ...+.....|++|
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~----~~~~~~~~~AL~D 117 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDS----SAGNVNRTTAATN 117 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----ccCCchHHHHHHH
Confidence 4467999999999999999999999885 345 899999999999999999999999988753 2122223489999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCC--chhhhhHHHHHHHHHHHHHHHH
Q 040679 105 CVEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVD--SKVKSDVKRKISNVARVTSNAL 182 (199)
Q Consensus 105 C~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~--~~~~~~v~~~~~~~~~L~snaL 182 (199)
|.|+|++++++|++++.++.. ..++|++||||||||||+||.|||.+.+ +.++..| ..++++.+|+||+|
T Consensus 118 C~ELlddavd~L~~Sl~~L~~-------~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSL 189 (553)
T PLN02708 118 CLEVLSNSEHRISSTDIALPR-------GKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNAL 189 (553)
T ss_pred HHHHHHHHHHHHHHHHHHhhh-------cchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHH
Confidence 999999999999999988863 2579999999999999999999998653 3455555 68899999999999
Q ss_pred HHHhccc
Q 040679 183 YMLTRLD 189 (199)
Q Consensus 183 aiv~~~~ 189 (199)
||++++.
T Consensus 190 Amv~~~~ 196 (553)
T PLN02708 190 SMMASYD 196 (553)
T ss_pred Hhhhccc
Confidence 9999853
No 11
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6.7e-30 Score=232.25 Aligned_cols=155 Identities=21% Similarity=0.280 Sum_probs=132.5
Q ss_pred cchHHhccCCCCCChhhHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC-CCHHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPAVCLRTLSSYKGAAETPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKS-TNKRERLALSDCV 106 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~~C~~~L~~~p~s~~~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~-~~~~~~~al~dC~ 106 (199)
....+..+|+.|+||++|+++|++. ...++.++++++|++++.+++++...+..+.... .. .+++++.|++||.
T Consensus 31 ~~~~~~s~C~~T~YP~~C~ssLs~s--~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~---~~~~~~r~k~AL~DC~ 105 (566)
T PLN02713 31 TPVSPSTICNTTPDPSFCKSVLPHN--QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRN---STLLSKSAIRALEDCQ 105 (566)
T ss_pred CCCCCccccCCCCChHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccCCHHHHHHHHHHH
Confidence 3556788999999999999999762 1238999999999999999999999999887531 12 3888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCC--chhhhhHHHHHHHHHHHHHHHHHH
Q 040679 107 EQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVD--SKVKSDVKRKISNVARVTSNALYM 184 (199)
Q Consensus 107 el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~--~~~~~~v~~~~~~~~~L~snaLai 184 (199)
|+|++++|+|++++.+++..+...+.+..+|++||||||||||+||+|||.+.+ +.+++.|...+.++.+|+||+|||
T Consensus 106 ELlddavD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaLAl 185 (566)
T PLN02713 106 FLAGLNIDFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSLAL 185 (566)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997543222346789999999999999999999998764 356778899999999999999999
Q ss_pred Hhc
Q 040679 185 LTR 187 (199)
Q Consensus 185 v~~ 187 (199)
++.
T Consensus 186 v~~ 188 (566)
T PLN02713 186 FTK 188 (566)
T ss_pred hcc
Confidence 987
No 12
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1e-29 Score=232.07 Aligned_cols=151 Identities=23% Similarity=0.477 Sum_probs=132.6
Q ss_pred hHHhccCCCCCChhhHHHHhccccC--CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 040679 30 DLVRSSCAHASYPAVCLRTLSSYKG--AAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCV 106 (199)
Q Consensus 30 ~~v~~~C~~T~~p~~C~~~L~~~p~--s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~ 106 (199)
+.|+.+|..|+||++|+++|.++.. +.. +|.+|++++|+++++++..+...+..+. ..++.++.|++||.
T Consensus 80 ~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~-------~~~~r~k~Al~DC~ 152 (596)
T PLN02745 80 KIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK-------FENPDEKDAIEDCK 152 (596)
T ss_pred HHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc-------cCCHHHHHHHHHHH
Confidence 6799999999999999999998653 234 9999999999999999999888877664 24788999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHHh
Q 040679 107 EQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYMLT 186 (199)
Q Consensus 107 el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv~ 186 (199)
|+|++++++|++++.++.. +...+.+.++|++||||||||||+||+|||.+ +.++++|...++++.+|+||+|||++
T Consensus 153 ELlddAid~L~~Sl~~l~~-~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e--~~l~s~m~~~l~~~~eLtSNALAiv~ 229 (596)
T PLN02745 153 LLVEDAKEELKASISRIND-EVNKLAKNVPDLNNWLSAVMSYQETCIDGFPE--GKLKSEMEKTFKSSQELTSNSLAMVS 229 (596)
T ss_pred HHHHHHHHHHHHHHHHHhh-cccccccchHHHHHHHHHHhccHhHHHhhhcc--cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999974 22234467899999999999999999999987 34889999999999999999999999
Q ss_pred cccC
Q 040679 187 RLDK 190 (199)
Q Consensus 187 ~~~~ 190 (199)
.+..
T Consensus 230 ~lss 233 (596)
T PLN02745 230 SLTS 233 (596)
T ss_pred hhhh
Confidence 8765
No 13
>PLN02197 pectinesterase
Probab=99.97 E-value=1.1e-29 Score=231.15 Aligned_cols=155 Identities=23% Similarity=0.392 Sum_probs=131.7
Q ss_pred chHHhccCCCCCChhhHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHH
Q 040679 29 HDLVRSSCAHASYPAVCLRTLSSYKGAAETPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCVEQ 108 (199)
Q Consensus 29 ~~~v~~~C~~T~~p~~C~~~L~~~p~s~~~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~el 108 (199)
...|+.+|..|+||++|.++|++++ ..+|.+|+++++++++++++++...+..+.... ....+++++.|++||.|+
T Consensus 38 ~k~I~s~C~~T~YP~lC~ssLs~~~--s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~--~~~~~~r~k~Al~DC~eL 113 (588)
T PLN02197 38 MKAVQGICQSTSDKASCVKTLEPVK--SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNM--GSSISPNNKAVLDYCKRV 113 (588)
T ss_pred HHHHHHhcCCCCChHHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--cccCCHHHHHHHHHHHHH
Confidence 3389999999999999999999987 238999999999999999999998888664110 024588999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHHhcc
Q 040679 109 ISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYMLTRL 188 (199)
Q Consensus 109 ~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv~~~ 188 (199)
|++++|+|++++.++... ........+|++||||||||||+||+|||.+. .+++.|...+.++.+|+||+|||++.+
T Consensus 114 l~davd~L~~Sl~~l~~~-~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~--~~k~~v~~~l~nv~~LtSNaLAiv~~l 190 (588)
T PLN02197 114 FMYALEDLSTIVEEMGED-LNQIGSKIDQLKQWLTGVYNYQTDCLDDIEED--DLRKTIGEGIANSKILTSNAIDIFHSV 190 (588)
T ss_pred HHHHHHHHHHHHHHHhhc-ccccccchhhHHHHHHHHHhChhhhhccccCc--chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999731 11223457999999999999999999999874 477889999999999999999999986
Q ss_pred cC
Q 040679 189 DK 190 (199)
Q Consensus 189 ~~ 190 (199)
..
T Consensus 191 s~ 192 (588)
T PLN02197 191 VS 192 (588)
T ss_pred ch
Confidence 54
No 14
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.5e-29 Score=227.55 Aligned_cols=155 Identities=21% Similarity=0.398 Sum_probs=133.7
Q ss_pred cchHHhccCCCCCChhhHHHHhccccCCC-C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPAVCLRTLSSYKGAA-E-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDC 105 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~~C~~~L~~~p~s~-~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC 105 (199)
+.+.|+.+|+.|+||++|+++|.+++... . ++.++++++++.++.++..+...+..+... ...++.++.|++||
T Consensus 37 ~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~----~~~~~~~k~AL~DC 112 (541)
T PLN02416 37 HLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTNLLSGAGQS----SNIIEKQRGTIQDC 112 (541)
T ss_pred HHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcc----cCCCHHHHHHHHHH
Confidence 35689999999999999999999987533 3 778999999999999999888777666432 34578899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 040679 106 VEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYML 185 (199)
Q Consensus 106 ~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv 185 (199)
.|+|++++|+|++++.+|+..+ . +.++|++|||||||||++||+|||.+.++.++++|...+.++.+|++|+|||+
T Consensus 113 ~El~~dAvD~L~~Sl~~L~~~~---~-~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~~~i~~~~~~v~qltSNALAlv 188 (541)
T PLN02416 113 KELHQITVSSLKRSVSRIQAGD---S-RKLADARAYLSAALTNKNTCLEGLDSASGPLKPKLVNSFTSTYKHVSNSLSML 188 (541)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc---c-cchhhHHHHHHHHhcchhhHHhhhhhcCcchhhHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999997432 1 36799999999999999999999987766678899999999999999999999
Q ss_pred hcccC
Q 040679 186 TRLDK 190 (199)
Q Consensus 186 ~~~~~ 190 (199)
+.+..
T Consensus 189 ~~~~~ 193 (541)
T PLN02416 189 PKSRR 193 (541)
T ss_pred ccccc
Confidence 98764
No 15
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.5e-29 Score=228.82 Aligned_cols=156 Identities=22% Similarity=0.405 Sum_probs=137.4
Q ss_pred CCCcchHHhccCCCCCChhhHHHHhccccCC--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 040679 25 HGEPHDLVRSSCAHASYPAVCLRTLSSYKGA--AE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLA 101 (199)
Q Consensus 25 ~~~~~~~v~~~C~~T~~p~~C~~~L~~~p~s--~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~a 101 (199)
+..+.+.|+..|+.|+||++|+++|.+++.+ .. +|.+|++++|+++++++.++...+..+.. ...++.++.|
T Consensus 46 ~~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~-----~~~~~~~~aA 120 (548)
T PLN02301 46 SSSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRI-----RINDPRDKAA 120 (548)
T ss_pred CCCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccCChHHHHH
Confidence 5667789999999999999999999998753 44 89999999999999999999999998854 3578889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHH
Q 040679 102 LSDCVEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNA 181 (199)
Q Consensus 102 l~dC~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~sna 181 (199)
++||.|+|++++++|++++++++.... ..++|++|||||||||++||+|||.+.. +++|...++++.+|++|+
T Consensus 121 L~DC~ELl~davd~L~~Sl~~l~~~~~----~~~~Dv~TWLSAALT~q~TC~DGF~~~~---~~~~~~~l~n~~qL~SNs 193 (548)
T PLN02301 121 LADCVELMDLSKDRIKDSVEALGNVTS----KSHADAHTWLSSVLTNHVTCLDGINGPS---RQSMKPGLKDLISRARTS 193 (548)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccc----cchHHHHHHHHHHhcchhhHHhhhhhhh---hhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999975432 2468999999999999999999998753 578999999999999999
Q ss_pred HHHHhcccCCC
Q 040679 182 LYMLTRLDKSR 192 (199)
Q Consensus 182 Laiv~~~~~~~ 192 (199)
|||++.++...
T Consensus 194 LAiv~~l~~~~ 204 (548)
T PLN02301 194 LAILVSVSPAK 204 (548)
T ss_pred HHhhccccccc
Confidence 99999876443
No 16
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.4e-29 Score=227.23 Aligned_cols=158 Identities=27% Similarity=0.468 Sum_probs=136.3
Q ss_pred cchHHhccCCCCCChhhHHHHhccccCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPAVCLRTLSSYKGA-AE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDC 105 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~~C~~~L~~~p~s-~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC 105 (199)
.+..|+.+|+.|+||++|+++|.++... .. +|.++++++++++++++.++...+..+... ..+++++.|++||
T Consensus 33 ~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~-----~~~~r~~~Al~DC 107 (537)
T PLN02506 33 FQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNAL-----SISYREQVAIEDC 107 (537)
T ss_pred HHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cCChHHHHHHHHH
Confidence 4669999999999999999999986433 33 899999999999999999999999988653 4678899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCC-cccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHH
Q 040679 106 VEQISDSVEDLSKTLNELKHLKGD-TFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYM 184 (199)
Q Consensus 106 ~el~~~a~~~L~~a~~~l~~~~~~-~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLai 184 (199)
.|+|++++++|.+++.+++....+ ......+|++|||||||||++||+|||.+.++.+++.|...+.++.+|+||+|||
T Consensus 108 ~EllddSvd~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~k~~v~~~l~nv~~LtSNALAi 187 (537)
T PLN02506 108 KELLDFSVSELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDRHLENFIKGSLKQVTQLISNVLAM 187 (537)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998643221 1112358999999999999999999998766678889999999999999999999
Q ss_pred HhcccC
Q 040679 185 LTRLDK 190 (199)
Q Consensus 185 v~~~~~ 190 (199)
++++..
T Consensus 188 v~~l~~ 193 (537)
T PLN02506 188 YTQLHS 193 (537)
T ss_pred Hhhccc
Confidence 998765
No 17
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.96 E-value=5.3e-29 Score=191.18 Aligned_cols=146 Identities=40% Similarity=0.671 Sum_probs=126.6
Q ss_pred cchHHhccCCCCCChh-hHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHH
Q 040679 28 PHDLVRSSCAHASYPA-VCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDC 105 (199)
Q Consensus 28 ~~~~v~~~C~~T~~p~-~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC 105 (199)
+...|+++|+.|+||. +|.++|.+++.+.. |+.+|++++|++++.++..+..++..+... .+.++..+.++++|
T Consensus 3 ~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~----~~~~~~~~~~l~~C 78 (152)
T PF04043_consen 3 TSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKN----PSKDPNAKQALQDC 78 (152)
T ss_dssp -HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----S-THHHHHHHHHH
T ss_pred hHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----ccCCHHhhHHHHHH
Confidence 5688999999999777 99999999977777 999999999999999999999999999874 36789999999999
Q ss_pred HHHHHHHHHHHHHHHHHh--hccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHH
Q 040679 106 VEQISDSVEDLSKTLNEL--KHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALY 183 (199)
Q Consensus 106 ~el~~~a~~~L~~a~~~l--~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLa 183 (199)
.++|++++++|++++++| ..+ .++++++|||+++++++||+|||.+.++..+++|...+.++.+|++|+|+
T Consensus 79 ~~~y~~a~~~l~~a~~~l~~~~~-------~~~~~~~~lsaa~~~~~tC~~~f~~~~~~~~~~l~~~~~~~~~l~s~aLa 151 (152)
T PF04043_consen 79 QELYDDAVDSLQRALEALNSKNG-------DYDDARTWLSAALTNQDTCEDGFEEAGSPVKSPLVQRNDNVEKLSSNALA 151 (152)
T ss_dssp HHHHHHHHHHHHHHHHHH--HHT--------HHHHHHHHHHHHHHHHHHHHHC-TTSSS--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcccc-------hhHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhh
Confidence 999999999999999999 432 58999999999999999999999533355789999999999999999999
Q ss_pred H
Q 040679 184 M 184 (199)
Q Consensus 184 i 184 (199)
|
T Consensus 152 i 152 (152)
T PF04043_consen 152 I 152 (152)
T ss_dssp H
T ss_pred C
Confidence 7
No 18
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.96 E-value=1.8e-28 Score=221.96 Aligned_cols=154 Identities=23% Similarity=0.354 Sum_probs=130.8
Q ss_pred hccCCCCCChhhHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 040679 33 RSSCAHASYPAVCLRTLSSYKGAAETPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCVEQISDS 112 (199)
Q Consensus 33 ~~~C~~T~~p~~C~~~L~~~p~s~~~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~el~~~a 112 (199)
...|+.|+||++|+++|++++.+..+|.++++++|++++.+++++...+..+.......++.+++++.|++||.|+++++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~~~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELlddS 82 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSSPSDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSELN 82 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHH
Confidence 35899999999999999987755449999999999999999999999998886310000246788899999999999999
Q ss_pred HHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHHhc
Q 040679 113 VEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYMLTR 187 (199)
Q Consensus 113 ~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv~~ 187 (199)
+|+|.+++.+|...+. ...+..+|++||||||||||+||+|||.+.++.++..|...+.++.+|+||+|||++.
T Consensus 83 vD~L~~Sl~~L~~~~~-~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 83 VDYLETISSELKSAEL-MTDALVERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHHHHHHHHHHhcccc-ccccchhhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999975421 1134578999999999999999999998766678888999999999999999999985
No 19
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=5.9e-28 Score=216.88 Aligned_cols=156 Identities=22% Similarity=0.356 Sum_probs=134.2
Q ss_pred CCcchHHhccCCCCCChhhHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHH
Q 040679 26 GEPHDLVRSSCAHASYPAVCLRTLSSYKGAAETPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDC 105 (199)
Q Consensus 26 ~~~~~~v~~~C~~T~~p~~C~~~L~~~p~s~~~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC 105 (199)
......|+.+|..|+||++|+++|++.+. +|.++++++|++++.+++++...+..+..... ...+++++.+++||
T Consensus 19 ~~~~~~I~~~C~~T~YP~~C~ssLs~~~~---~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~--~~~~~r~~~Al~DC 93 (497)
T PLN02698 19 FAYQNEVQRECSFTKYPSLCVQTLRGLRH---DGVDIVSVLVNKTISETNLPLSSSMGSSYQLS--LEEATYTPSVSDSC 93 (497)
T ss_pred hhHHHHHHHhccCCCChHHHHHHHhccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cCcChHHHHHHHHH
Confidence 45578999999999999999999999774 89999999999999999999999888765310 11247778999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccC----CchhhhhHHHHHHHHHHHHHHH
Q 040679 106 VEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDV----DSKVKSDVKRKISNVARVTSNA 181 (199)
Q Consensus 106 ~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~----~~~~~~~v~~~~~~~~~L~sna 181 (199)
.|+|++++++|++++.+|..... +.++|++||||||||||+||+|||.+. ++.+++.|...++++.+|++|+
T Consensus 94 ~Ell~dsvd~L~~Sl~~l~~~~~----~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSNA 169 (497)
T PLN02698 94 ERLMKMSLKRLRQSLLALKGSSR----KNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNS 169 (497)
T ss_pred HHHHHHHHHHHHHHHHHHhhccc----cchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999975321 367999999999999999999999532 2467889999999999999999
Q ss_pred HHHHhcccC
Q 040679 182 LYMLTRLDK 190 (199)
Q Consensus 182 Laiv~~~~~ 190 (199)
|||++.+..
T Consensus 170 LAmv~~l~~ 178 (497)
T PLN02698 170 LALVNRITP 178 (497)
T ss_pred HHHHhhhhc
Confidence 999998765
No 20
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=1e-23 Score=189.85 Aligned_cols=126 Identities=25% Similarity=0.386 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCc--ccccch
Q 040679 59 PRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCVEQISDSVEDLSKTLNELKHLKGDT--FSWQMS 136 (199)
Q Consensus 59 ~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~el~~~a~~~L~~a~~~l~~~~~~~--~~~~~~ 136 (199)
+.+++++++++++++++++...+..+... ..+++++.|++||.|++++++|+|++++.+|+...+.. .....+
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~l~~~-----~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~ 111 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQFDKV-----FGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGS 111 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchh
Confidence 45889999999999999999999888653 34788899999999999999999999999997542211 123579
Q ss_pred hhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHHhccc
Q 040679 137 NAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYMLTRLD 189 (199)
Q Consensus 137 d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv~~~~ 189 (199)
|++||||||||||+||+|||.+.++.++..|...+.++.+|+||+|||++...
T Consensus 112 DvqTWLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLALv~~~~ 164 (520)
T PLN02201 112 DLRTWLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLTMVHPPP 164 (520)
T ss_pred HHHHHHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999876666778888999999999999999998754
No 21
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=4.9e-23 Score=185.44 Aligned_cols=126 Identities=28% Similarity=0.519 Sum_probs=109.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccchh
Q 040679 58 TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCVEQISDSVEDLSKTLNELKHLKGDTFSWQMSN 137 (199)
Q Consensus 58 ~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d 137 (199)
+|.+|++++|+++++++.++...+..+.... .+..+++++.|++||.|+|++++++|++++.++.... ..++|
T Consensus 50 ~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~--~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~~-----~~~~D 122 (530)
T PLN02933 50 TIPELIIADLNLTILKVNLASSNFSDLQTRL--GPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSSS-----PEFND 122 (530)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cchhH
Confidence 8999999999999999999999999886421 0246889999999999999999999999999997421 24799
Q ss_pred hHHHHHHhhcccchHhhccccCC--------chhhhhHHHHHHHHHHHHHHHHHHHhcccC
Q 040679 138 AETWVSSALTDEDTCLDGFEDVD--------SKVKSDVKRKISNVARVTSNALYMLTRLDK 190 (199)
Q Consensus 138 ~~twLSAAlt~~~TC~dgf~~~~--------~~~~~~v~~~~~~~~~L~snaLaiv~~~~~ 190 (199)
++|||||||||++||+|||.+.+ +++++.|...+.++.+|+||+|||++.++.
T Consensus 123 v~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~ 183 (530)
T PLN02933 123 VSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISG 183 (530)
T ss_pred HHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999998643 257788999999999999999999998765
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1.8e-22 Score=180.01 Aligned_cols=152 Identities=18% Similarity=0.234 Sum_probs=128.3
Q ss_pred hccCCCCCChhhHHHHhcccc----CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC-CHHHHHHHHHH-
Q 040679 33 RSSCAHASYPAVCLRTLSSYK----GAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKST-NKRERLALSDC- 105 (199)
Q Consensus 33 ~~~C~~T~~p~~C~~~L~~~p----~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~-~~~~~~al~dC- 105 (199)
-.+|..++||+.|...|.... .... ++.+++.++++.++.++..+...+..+... .. +++++.+++||
T Consensus 2 ~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~a~~dc~ 76 (509)
T PLN02488 2 IGVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKL-----LEEMENDMLGVKEDT 76 (509)
T ss_pred ceecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhchhhhhhHHHhH
Confidence 357999999999999988766 3333 799999999999999999999998888764 33 88899999999
Q ss_pred ---HHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHH
Q 040679 106 ---VEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNAL 182 (199)
Q Consensus 106 ---~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaL 182 (199)
.|+|++++++|.+++..+........ ...+|++||||||+|||+||+|||.+ +.++..|...+.++.+|++|+|
T Consensus 77 ~~c~el~~~~~~~l~~s~~~~~~~~~~~~-~~~~d~~twLSa~lt~q~TC~dg~~~--~~~~~~~~~~l~~~~~~~sn~L 153 (509)
T PLN02488 77 NLFEEMMESAKDRMIRSVEELLGGESPNL-GSYENVHTWLSGVLTSYITCIDEIGE--GAYKRRVEPELEDLISRARVAL 153 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccc-CcHHHHHHHHHHhHhchhhHhccccC--cchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999963211111 24689999999999999999999954 3578889999999999999999
Q ss_pred HHHhcccCCC
Q 040679 183 YMLTRLDKSR 192 (199)
Q Consensus 183 aiv~~~~~~~ 192 (199)
||+..+....
T Consensus 154 a~~~~~~~~~ 163 (509)
T PLN02488 154 AIFISISPRD 163 (509)
T ss_pred Hhhccccccc
Confidence 9999877443
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.85 E-value=1.1e-20 Score=169.79 Aligned_cols=130 Identities=18% Similarity=0.282 Sum_probs=99.1
Q ss_pred CCChhhHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 040679 39 ASYPAVCLRTLSSYKGAAETPRDLAQAAVNVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCVEQISDSVEDLSK 118 (199)
Q Consensus 39 T~~p~~C~~~L~~~p~s~~~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~el~~~a~~~L~~ 118 (199)
-+||+.|..+|++...+ -|..++..+++..+.... .. .. .....|++||.|++++++++|++
T Consensus 57 ~~~~~~~~~~~s~~~~~--~~~~~~~~~~~~~~~~~~---------~~------~~-~~~~~Al~DC~ELlddavd~L~~ 118 (529)
T PLN02170 57 SPSSSSKQGFLSSVQES--MNHALFARSLAFNLTLSH---------RT------VQ-THTFDPVNDCLELLDDTLDMLSR 118 (529)
T ss_pred CCCcchhhhhhhhhhcc--ChHHHHHhhhHhhhhhhh---------hh------cc-cchhHHHHHHHHHHHHHHHHHHH
Confidence 38999999999875433 355577777776555211 11 11 12257999999999999999999
Q ss_pred HHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCC--chhhhhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 040679 119 TLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVD--SKVKSDVKRKISNVARVTSNALYMLTRLDKSR 192 (199)
Q Consensus 119 a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~--~~~~~~v~~~~~~~~~L~snaLaiv~~~~~~~ 192 (199)
+++.... .+..+|++||||||||||+||.|||.+.+ ..++..+...+.++.+|+||+|||++.+....
T Consensus 119 S~~~~~~------~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~~~ 188 (529)
T PLN02170 119 IVVIKHA------DHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKSKH 188 (529)
T ss_pred HHHhhcc------ccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 9855432 24689999999999999999999998765 34556777788999999999999999876533
No 24
>PLN02916 pectinesterase family protein
Probab=99.69 E-value=1.5e-16 Score=142.70 Aligned_cols=87 Identities=32% Similarity=0.439 Sum_probs=72.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHH
Q 040679 93 STNKRERLALSDCVEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKIS 172 (199)
Q Consensus 93 ~~~~~~~~al~dC~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~ 172 (199)
+.+-....|++||.|+|++++++|.+++..+... ..+|++||||||||||+||.|||.+.+ ... ...+.
T Consensus 56 ~~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~~-------~~~DvqTWLSAALTnq~TClDGf~~~~-~~~---~~~v~ 124 (502)
T PLN02916 56 GSYYNLGEALSDCEKLYDESEARLSKLLVSHENF-------TVEDARTWLSGVLANHHTCLDGLEQKG-QGH---KPMAH 124 (502)
T ss_pred CCcccHhHHHHHHHHHHHHHHHHHHHHHHhhccC-------chHHHHHHHHHHHhCHhHHHHhhhhcc-ccc---hHHHH
Confidence 4566678999999999999999999999877532 479999999999999999999998653 222 33467
Q ss_pred HHHHHHHHHHHHHhcccC
Q 040679 173 NVARVTSNALYMLTRLDK 190 (199)
Q Consensus 173 ~~~~L~snaLaiv~~~~~ 190 (199)
++.+|+||+|||++.+..
T Consensus 125 nvt~ltSNaLAlv~~~~~ 142 (502)
T PLN02916 125 NVTFVLSEALALYKKSRG 142 (502)
T ss_pred HHHHHHHHHHHHhhhhhh
Confidence 999999999999988764
No 25
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=80.06 E-value=12 Score=23.29 Aligned_cols=45 Identities=16% Similarity=0.308 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 040679 68 NVSLSRASKVSAYLSQVSSNVNKGKSTNKRERLALSDCVEQISDSVEDLS 117 (199)
Q Consensus 68 ~~a~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~al~dC~el~~~a~~~L~ 117 (199)
+.++....++.+.+..+.-. ..|+..+..+..|.+..+..+.+|+
T Consensus 3 kq~lAslK~~qA~Le~fal~-----T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 3 KQTLASLKKAQADLETFALQ-----TQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHHHhhHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 34555566666667767653 5688889999999998888888775
No 26
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=68.08 E-value=40 Score=23.80 Aligned_cols=55 Identities=18% Similarity=0.325 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHh-----hcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040679 65 AAVNVSLSRASKVSAYLSQV-----SSNVNKGKSTNKRERLALSDCVEQISDSVEDLSKTLN 121 (199)
Q Consensus 65 ~ai~~a~~~~~~~~~~i~~l-----~~~~~~~~~~~~~~~~al~dC~el~~~a~~~L~~a~~ 121 (199)
+..+.|..++.+....+..- ...+ .++.+..++.++..|.+-|-++-.-+.++.-
T Consensus 26 VkqqlAvAnAqeLv~kisekCf~KCit~P--Gssl~~~e~~Cis~CmdRyMdawniVSrty~ 85 (97)
T KOG1733|consen 26 VKQQLAVANAQELVSKISEKCFDKCITKP--GSSLDSSEKSCISRCMDRYMDAWNIVSRTYI 85 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44466777777776655431 2222 1456888999999999999999888877744
No 27
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=48.58 E-value=63 Score=20.73 Aligned_cols=30 Identities=23% Similarity=0.447 Sum_probs=23.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040679 92 KSTNKRERLALSDCVEQISDSVEDLSKTLN 121 (199)
Q Consensus 92 ~~~~~~~~~al~dC~el~~~a~~~L~~a~~ 121 (199)
+..+..+..+++.|.+-|-++-..+...+.
T Consensus 35 ~~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 35 SSLSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp SS--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456889999999999999999888877654
No 28
>PF01093 Clusterin: Clusterin; InterPro: IPR000753 Clusterin is a vertebrate glycoprotein [], the exact function of which is not yet clear. Clusterin expression is complex, appearing as different forms in different cell compartments. One set of proteins is directed for secretion, and other clusterin species are expressed in the cytoplasm and nucleus. The secretory form of the clusterin protein (sCLU) is targeted to the ER by an initial leader peptide. This ~60kDa pre-sCLU protein is further glycosylated and proteolytically cleaved into alpha- and beta-subunits, held together by disulphide bonds. External sCLU is an 80kDa protein and may act as a molecular chaperone, scavenging denatured proteins outside cells following specific stress-induced injury such as heat shock. sCLU possesses nonspecific binding activity to hydrophobic domains of various proteins in vitro []. A specific nuclear form of CLU (nCLU) acts as a pro-death signal, inhibiting cell growth and survival. The nCLU protein has two coiled-coil domains, one at its N terminus that is unable to bind Ku70, and a C-terminal coiled-coil domain that is uniquely able to associate with Ku70 and is minimally required for cell death. Clusterin is synthesized as a precursor polypeptide of about 400 amino acids which is post-translationally cleaved to form two subunits of about 200 amino acids each. The two subunits are linked by five disulphide bonds to form an antiparallel ladder-like structure []. In each of the mature subunits the five cysteines that are involved in disulphide bonds are clustered in domains of about 30 amino acids located in the central part of the subunits. This entry represents the clusterin precursor and related proteins.; GO: 0008219 cell death
Probab=36.32 E-value=77 Score=28.80 Aligned_cols=62 Identities=10% Similarity=0.102 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---CcccccchhhHHHH-HHhhcccc-hHhhccccC
Q 040679 98 ERLALSDCVEQISDSVEDLSKTLNELKHLKG---DTFSWQMSNAETWV-SSALTDED-TCLDGFEDV 159 (199)
Q Consensus 98 ~~~al~dC~el~~~a~~~L~~a~~~l~~~~~---~~~~~~~~d~~twL-SAAlt~~~-TC~dgf~~~ 159 (199)
.-..|+-|.+-.++|+...+++-..|++-.. ......-++-+-+| +..|.++. ||..||.-.
T Consensus 42 Lm~tL~k~kk~KeeAl~l~~e~e~kLee~e~~Cn~sm~~lWeECkpCL~~tCm~FYt~tCr~g~~~v 108 (436)
T PF01093_consen 42 LMKTLEKSKKEKEEALKLANEVEEKLEEEEEVCNESMMALWEECKPCLKQTCMRFYTRTCRSGSGLV 108 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcccCCCchhH
Confidence 3478999999999999988888777765311 00111234556666 45777777 999888553
No 29
>PF14290 DUF4370: Domain of unknown function (DUF4370)
Probab=34.62 E-value=2.1e+02 Score=23.30 Aligned_cols=61 Identities=20% Similarity=0.092 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCC
Q 040679 99 RLALSDCVEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVD 160 (199)
Q Consensus 99 ~~al~dC~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~ 160 (199)
..+-+-|.|+++- +..|...++.+-...+.+..--.+....-|-++..-..+-+|.|....
T Consensus 130 fRAAeAvEeFgG~-L~tLrm~idDl~GlsGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp~E 190 (239)
T PF14290_consen 130 FRAAEAVEEFGGI-LVTLRMEIDDLCGLSGENVKPLPDYIENALRTAYKRYMTYLDSFGPDE 190 (239)
T ss_pred HHHHHHHHHhhhh-HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 3466778776665 888888888887665554444556677777788887888899997644
No 30
>PF08287 DASH_Spc19: Spc19; InterPro: IPR013251 Spc19 is a component of the DASH complex. The DASH complex associates with the spindle pole body and is important for spindle and kinetochore integrity during cell division [, ].
Probab=34.04 E-value=1.3e+02 Score=23.14 Aligned_cols=24 Identities=33% Similarity=0.609 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 040679 102 LSDCVEQISDSVEDLSKTLNELKH 125 (199)
Q Consensus 102 l~dC~el~~~a~~~L~~a~~~l~~ 125 (199)
+++|..-+..++..|+.+++-|..
T Consensus 2 L~~cV~SL~~S~~lL~~Si~~L~~ 25 (153)
T PF08287_consen 2 LSNCVSSLRSSVQLLQSSIETLDS 25 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455666666666666666666654
No 31
>PLN02749 Uncharacterized protein At1g47420
Probab=33.64 E-value=2.3e+02 Score=22.03 Aligned_cols=61 Identities=18% Similarity=0.139 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHhhcccchHhhccccCC
Q 040679 99 RLALSDCVEQISDSVEDLSKTLNELKHLKGDTFSWQMSNAETWVSSALTDEDTCLDGFEDVD 160 (199)
Q Consensus 99 ~~al~dC~el~~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~dgf~~~~ 160 (199)
..|-+-|.|+++ .+..|...++.+-...+.+..--.+....-|-++..-..+-+|.|....
T Consensus 64 frAAeAveeFgG-~L~sLrmeidDl~GlsGEnv~PLPd~~~~Al~tay~rY~~YLdsFgp~E 124 (173)
T PLN02749 64 FRAAEAVEEFGG-TLVSLRMEIDDLIGLSGENVKPLPDYIENALETAYQRYAAYLDSFGPEE 124 (173)
T ss_pred HHHHHHHHHHhh-HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 446677877766 8888888888887665544444456677777778777888899997644
No 32
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=29.81 E-value=3.3e+02 Score=27.05 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CC----Ccc-cccchhhHHHHHHhhcccchHhhccccCCch---
Q 040679 94 TNKRERLALSDCVEQISDSVEDLSKTLNELKHL---KG----DTF-SWQMSNAETWVSSALTDEDTCLDGFEDVDSK--- 162 (199)
Q Consensus 94 ~~~~~~~al~dC~el~~~a~~~L~~a~~~l~~~---~~----~~~-~~~~~d~~twLSAAlt~~~TC~dgf~~~~~~--- 162 (199)
..|.++..+..|......|+++..-+.+.-... .. .++ ..--+|++|-|++.+.+.++=.+--...+++
T Consensus 619 l~p~~~rlL~a~~~q~AlAler~~L~~~~~~a~l~~e~E~lRsaLL~sISHDLRTPLt~i~Gaa~tL~~~~~~l~~~~~a 698 (890)
T COG2205 619 LAPEQRRLLDAVLTQIALALERVTLAEEAEQARLAAERERLRSALLASISHDLRTPLTAIMGAAETLLLDGEALSPEDRA 698 (890)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcHHHHhhhHHHhhhcccccCcHhHH
Confidence 467777888888888888888765544322110 00 011 2245799999999999998887766665532
Q ss_pred -hhhhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 040679 163 -VKSDVKRKISNVARVTSNALYMLTRLDKSRERPRL 197 (199)
Q Consensus 163 -~~~~v~~~~~~~~~L~snaLaiv~~~~~~~~~~~~ 197 (199)
.-+.+......+..|+.|-|+| .++....-+|++
T Consensus 699 eLl~~I~ees~~L~rlV~NLLdm-TRi~sG~~~l~~ 733 (890)
T COG2205 699 ELLSSIREESERLTRLVTNLLDM-TRLQSGGVNLKL 733 (890)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH-HHHhcCCccccc
Confidence 2345666778899999999999 566555544543
No 33
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=28.15 E-value=41 Score=19.50 Aligned_cols=19 Identities=32% Similarity=0.303 Sum_probs=8.3
Q ss_pred CchhHHHHHHHHHHHhhhc
Q 040679 1 MLRLCSLITLFLLLSCSAA 19 (199)
Q Consensus 1 ~~~~~~~~~~~l~~~~~~~ 19 (199)
|+.++-.+++.|+.++++.
T Consensus 1 Mk~l~~a~~l~lLal~~a~ 19 (36)
T PF08194_consen 1 MKCLSLAFALLLLALAAAV 19 (36)
T ss_pred CceeHHHHHHHHHHHHhcc
Confidence 4443332444444555543
No 34
>PF10792 DUF2605: Protein of unknown function (DUF2605); InterPro: IPR019728 This entry represents a protein conserved in Cyanobacteria. The function is not known.
Probab=26.41 E-value=2.5e+02 Score=20.10 Aligned_cols=55 Identities=15% Similarity=0.195 Sum_probs=46.2
Q ss_pred chhhHHHHHHhhcccchHhhccccCCchhhhhHHHHHHHHHHHHHHHHHHHhcccCC
Q 040679 135 MSNAETWVSSALTDEDTCLDGFEDVDSKVKSDVKRKISNVARVTSNALYMLTRLDKS 191 (199)
Q Consensus 135 ~~d~~twLSAAlt~~~TC~dgf~~~~~~~~~~v~~~~~~~~~L~snaLaiv~~~~~~ 191 (199)
.+|.+.|.+-..+--++|.+.|-. ++.+..+..+++.-.+=+.-+-++++.-...
T Consensus 16 LeDF~yWF~Rs~~LLe~e~~~fls--~~eQ~~Ll~Rv~qaq~ev~aa~~Lf~At~~q 70 (98)
T PF10792_consen 16 LEDFQYWFSRSRELLETEPISFLS--PEEQSDLLERVKQAQQEVNAARALFQATDGQ 70 (98)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 578999999999999999999977 4467889889988888888888888765443
No 35
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=26.13 E-value=58 Score=22.74 Aligned_cols=26 Identities=15% Similarity=0.354 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 040679 100 LALSDCVEQISDSVEDLSKTLNELKH 125 (199)
Q Consensus 100 ~al~dC~el~~~a~~~L~~a~~~l~~ 125 (199)
...+||.|-+-+-+.++++|.++|+.
T Consensus 65 ATfnDc~eA~veL~~~IkEAr~~L~r 90 (95)
T KOG4841|consen 65 ATFNDCEEAAVELQSQIKEARADLAR 90 (95)
T ss_pred eccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 35688999999999999999999975
No 36
>PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=25.76 E-value=3.6e+02 Score=21.85 Aligned_cols=51 Identities=8% Similarity=0.069 Sum_probs=41.3
Q ss_pred cCCCCCChhhHHHHhccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 040679 35 SCAHASYPAVCLRTLSSYKGAAE-TPRDLAQAAVNVSLSRASKVSAYLSQVSSN 87 (199)
Q Consensus 35 ~C~~T~~p~~C~~~L~~~p~s~~-~~~~l~~~ai~~a~~~~~~~~~~i~~l~~~ 87 (199)
-|. +.|+..|.. +.-+.+.+- |.++-++-+..-+.++...++..++.+...
T Consensus 6 gCq-saYY~amEk-vG~hKRdilvdrVe~Ardsq~eaqeQF~sALe~f~sl~~~ 57 (201)
T PF11172_consen 6 GCQ-SAYYSAMEK-VGVHKRDILVDRVEDARDSQQEAQEQFKSALEQFKSLVNF 57 (201)
T ss_pred HhH-HHHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 466 568999888 565566555 888899999999999999999998888764
No 37
>KOG4514 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.48 E-value=3.9e+02 Score=21.46 Aligned_cols=24 Identities=25% Similarity=0.344 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 040679 99 RLALSDCVEQISDSVEDLSKTLNE 122 (199)
Q Consensus 99 ~~al~dC~el~~~a~~~L~~a~~~ 122 (199)
..---+|.+.|.++++.|.+++++
T Consensus 156 s~lt~~~vq~yr~aV~kl~d~~Da 179 (222)
T KOG4514|consen 156 SSLTADNVQVYRNAVNKLTDTLDA 179 (222)
T ss_pred HHhhhhHHHHHHHHHHHHHHHhhh
Confidence 344578999999999999988775
No 38
>TIGR01601 PYST-C1 Plasmodium yoelii subtelomeric domain PYST-C1. The C-terminal portions of the genes which contain this domain are divergent and some contain other yoelii-specific paralogous domains such as PYST-C2 (TIGR01604).
Probab=21.13 E-value=34 Score=23.40 Aligned_cols=16 Identities=44% Similarity=0.659 Sum_probs=11.3
Q ss_pred chhHHHHHHHH--HHHhh
Q 040679 2 LRLCSLITLFL--LLSCS 17 (199)
Q Consensus 2 ~~~~~~~~~~l--~~~~~ 17 (199)
+|+||||-+-| +|.+|
T Consensus 3 krIfslVcivlY~ll~v~ 20 (82)
T TIGR01601 3 KRIFSLVCIVLYILLAVS 20 (82)
T ss_pred ceEeehhHHHHHHHHhee
Confidence 58999987777 44444
No 39
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=20.17 E-value=80 Score=22.18 Aligned_cols=25 Identities=16% Similarity=0.480 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 040679 101 ALSDCVEQISDSVEDLSKTLNELKH 125 (199)
Q Consensus 101 al~dC~el~~~a~~~L~~a~~~l~~ 125 (199)
..+||-|-|++=..++++|.+.|+.
T Consensus 62 tFnDcpeA~~eL~~eI~eAK~dLr~ 86 (91)
T PF08285_consen 62 TFNDCPEAAKELQKEIKEAKADLRK 86 (91)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999875
Done!